CmoCh16G011650.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G011650.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Fatty acid oxidation complex subunit alpha
Location	Cmo_Chr16 : 8302440 .. 8308168 (+)
Sequence length	1206

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGCTTTGCGATCGTCGTTTTGTATGAAGTATGGGGGCATTCAGAGTTCTGGGCGGAAAGCTGATCAACCTCAGAACTCAACTCCATCATTCACCTCAGAACATTTCGATTCCGGCCGCCCTGCTCTGCCGTACATTTCTGACCTCCAACTCTTCCAAGGGCCTTAGATCGTTCTCACATCCATGGCGGTACACTCATTGCAGAACTCTCATTTTGGAGTCATTGTTTTCTGAGTCTGTCCGTCTTCACCGACTTTCAGACTCCGATTCTGGTAATTTCTGAGCTGAGGATATGTATGTCTTTTTTTAATTTTGTTGTGTGATATGCTTTAATAGTCTGCGATCAATGGTTATATGCTTGGGTTATTTAGATTGCGGAAGTTCAAGGATTTTGGATCCCGAATTTGCTAGTTTATGGTTTGGTGATCAAGTAATAAGTAATATTCCTTGCATGTCGGTTTGAGAGGTGCAAGAGTGCAATTGTGTGCAATTGTGTGTCACTTGTTCTAACCAAGGAAACAAGTCAACCTTGAGAAATTTGGACATTGCGGACAACGTCCTTGACAAGCAAGACCGGGACATCTGCAATTGTGTGACACGTTGTGAGAAAATGTTTAGAAATTCTGAGCAGGGAAATACATTTGAAAACAATTTGAAGAATTGAAAAAGTAACGTTATATGACTATAAGCAAATAAAGAGATATCACGACTTAAATAGCATATAACTCAGGATAGGAAGTACTTTTTGGGGCATTTTAGCCCTAGTGGGTGTAGACATGGTTTTGGTGGATGGCCATACACCCCTGTATTGACCTAACGACAAATGGTAAAGGCCTATATAGGATGAAAGCATGTAAAAGGGGTTTAGAACGAACATGCAACCATGGACAACACGTCCTAGACAAGCATGACCGGGACATCTGTCATGCGGCCATAAACAACACGCCTTGGACAAACATGACCGTGACATCCAGCTTCATAATCTTGATAACATACGCCAATTGGATTTGAGATGGAACTATATATTTATCTAATACGGTATCAAAGTTGCTGCACTTGTACCCCTTACTTAAAGGAGCTTAATTTTTATTCTGGAATTGATGGTTTGATTGTCTGCAGAGTATGGGAGATTTAGAGTATGTTTGGATTAACATCTCAAGTGATTTTGAAGGGCTAAAAATGGTTTCTTCAAAATTTTAGAGAAACACTTTATGAAATAACTATATTGGTTCAAAATCATTCTTTTCTTCATTTGTAGTTCTATAATAATTTCCTTTCAAGTTTCTGGAGTGTTCTTGGGCTGCTTGAGTTATATTTGAATTCAAATCCACTTGGTTTTATCAATGGCAGGCATTGTTGAGGTACATTTAGCCAGGCCTGAGGTGAAAAATGCCATTGACAAGGATATGCTGAGGGGACTGCGTCATGCCTTTGAATCTGTTGATAGCGATCCATCTGCCAATGTTATGATGATCTGCAGCTCTGTCCCAAAGGTGTTTTGTGCAGGTGCCGATTTGAAGGTATTCTTGTTTATATCTAACAATTCAACTCTCTCATTATGATATAGTCTTTAACTTCTTTTCCCCTTCATTCTTTTAAGTAAAGGAACGTAAGGAGATGACTGCATCAGAAGTTCATTCCTATGTCACCTCACTGCGGTCTGCATTCACATTTTTGGAGGTAGATTGTTATTATTATCTACAGGCCTACCTGCTTTTACATTCTATGATTTATTTACATCATATATGAACAAGGATGTCTTGTTAAGTATATAATGCATCAGTTGAGATGCACATGACTACATCAGTTATCATCGATATTCCGTCCATGATCTTTCGTGGCTGATGCTAGTAAACTGTAAGCGCTTCCTAAGTAATAAAGAATTAAAGGGTTTAGTGTGAGATCCCACGTCGGTTGGGGAGGAGAACGAAATACTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTAATGGAGAAGCCCATAAAGGAAAGCCCAAAAAGAACAGTATCTGGATGAGCACCTATTCCGCTATGTAACTTGAGGGGAAGCTTGAAAGGGAAAGCCCAAAGAGGTTAGTATCTGTTAGCGGTGGGGCTGGGCCGTTACATTTAGGGAGCTCAAGTCATAGTGGCCACTCAAGATAGAATTTAAGATTCTACGAGTTACTTTGACAACCAAATGCAGTAAGGTTAGACGATTGTCCCGTGAGAATAGTTGAGTCAGGTACAAGTTGGCCCAAACGCTCACGGATATTTTTTTAATACTTCCCTTTTTTCATCACGAATCTAGTTTTCAATTGACTTAATCTAAATTTATTTTATTCAGGGACTGTGTATTCCTACTATTTCAGTTATTGAAGGAGCAGCGTTCGGTGGTGGACTCGAAATGGCTCTTGCGTGTGATCTTCGGATATGTGGTAATTAATTTAGTCAATTGTTTTCTAGTTTATTAAGTTCTTTACCAGAACGTCTTGCTGTATTGGAGTTATAACTCTCATCGTTAAACCATGATCCAGGGGAGGATGCCAAGCTCAGTTTGCCAGAAACCGGACTGGCTATAATTCCTGGGTATGTAGTAAATACTTATTTATATATACGGTCACATATGACGTTTTGAGAGCTCACTTGAGGCCAGTAGAAGGAAGCCTGCATGCATATTGAAGTTCCATAGTTCTATTACTTAGTATAAACATTAAACTGTTGGTGGTGGAAGCTGGATGAGACTCTTCCTAAGACTAGTTTTCAAACCCCTCGCTTCTTCTTTTCTATGTGAGATCCCACATTGGTTTGAGAGGAGAACGAAGCATTTCTTACAAGAGTGTGGCAACCTCTCCCTAGCATATGCGTTTTAAAACTGTGAGGCTGACGGCAATATGTAACGAGCCAAAGCGAATAATATTTGTTAGCAGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCTAGACACCAGGAGGTGTGCCAGCGAGGACTTCGAGTCCCCATGGGGGGTGGATTATGAGATCTCACATTAGTTGAAGAGGAGAACGAAGCATTTTTAATAAGGGTGTGGAAACCTCTCCCTAGCATACGTGTTTTAAAACCGTGAGGTTGACGGCGATACTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAGACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTAAGGGGAAACCCGAAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGTGGTGGATCTAAGGCGTTATAGATACATAACGGGCCAAAGTGGACAATATCTGTTAGTGGTGCACTTGGGCTGTTACAAATAGTATTAGAGCCAGACATCGGGCTGTGTGCCAGCGAGGACGCTAGACCTCCAAAAGGGGTGGATTATGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAACCGTGAGGTCGACGGCGATATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGATGCGTTTTAAAGCCTTGAGGGAAAACCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTAGGGCGTTACAGATACATAACGGGCCAAAGTGGACAATATTTGTTAGTGGTGCACTTGGGCTGTTACAAATAGTATCAGAGCCAGACACCGGGCTGTGTGCCAGCGAGGACGCTAGACCTCCAAAGGGGGTGGATTATGAGATTCCACATCGGTTGGGGAGGAGAACGAAACACTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATATGCGTTTTAAAACTGTGAGGCTGATGACAATACATAACAGACCAAGGCGGACAATATCTGTTTGTGGTGGGCTTGAGCTATTACATAACATGAAGGTTGTCCTGTATGCACGAGCAGATTACACCTTGTGAACATGTTTTCTCTCAGGGCAGGTGGGACTGCAAGGCTTCCCAGGCTTGTTGGGAAATCAATAGCAAAGGAACTTATATTCACTGGTCGTAAGGTCAGTGGCAGAGATGCTCTATCTATAGGTATGATTGCCAGTTTTTTTAAAGCTTAAGTTCAGTGTTTTATTGAGTTAAGGATAAGAACATAAATTTCCCGCCTTAGGTCTTGTCAATTACTGCGTCCCTGCTGGTGAAGCTTATGCAAAGGCACTGGAAATTGCCCAAGAGATAAATCAGAAGGTAATTAGAACATTAATATAATTATCTTTCTGGCTATGTGACGTATCGACGTCAGCCTCACGGTTTTAAAACGTGTCTATTAGGGAGAGATTTCTACCCCTTTATAAGAAATGTTTCGTTTCGTTCTTCAACCGATGTAGGATCTCACAATCCACCCCCTTGGGGTCTCAGCGTCCTCGCTGGCTCACCTATTGTGAGATCCCACATCAGGTGGAGAGGGAAACGAAACATTCCTTAAGGGTGTGGAAACCTCTCCCTAACAGACACGCTTTAAAACCGTGAGGTTGACAGTGATACGTAACGGGCTAGAGCGAATAATGTCTATTAGCGGTGGGCTTAAGTTGTTACAAATGGTATTAGAGTTAGACACCGAGCGGTGTGCCAGCGAGGACGCTGAGCCCCCAAGAGGGGTGGACTGTGAGATCCCATATCGGTTAGAGAGGGGAACAAAACATTCCTTTTAAGGGTATGAAAACCTCTCCCTAACAGACGCATTTTAAGATCATGAGGCTGACGGTGATATGTAATGGACTAAAGCAGACAATATCTATTAGTGGTGGGCTTGAGCTGTTATAAATGGTATCAGAGTCAAACACCAAGTAGTGTGCCAGCGAGAACGCTTAGCCCCTAAGGGAAGTGGATTGTGAGATCTCTCATCGATTGAAGAAGGGAACGAAACATTCCTTATAAGAGTGTGAAAACCTCTCTCTAACAGACGCGTTTTAAAACTGTAACAAGCCAAAGCAAACCAGTGGATTCAAGCTATTACAGTAGATCACAAAATGCCTAGAATCCAATACCCAAGTAATGTATGAGAGTAACTGTTGAGTAATGTATTAACAGGGTCCACTAGCAATAAAGATGGCGAAGAAGGCGATCGACGAGGGGCTCGAGGGAGACCTGGAATCAGCTATGGAAGTAGAAGATGAATGTTACAAAGAACTCTTAGACACGAAAGATCGCTTGGAAGGATTGACAGCATTTGCCGAGAAGCGCAAGCCGAGATATTGAGGAGAATAGATAGGTAACCAACTGTTGCTTCCTCAATACAATATGGTTGCCTCTGATCTTCATTTAACGTTCTAAAAATACAAGAATTAATGCAAGCTTTTCCGTAGCTTAGGTACCTGAAATGAGAGAGAGCTTCAGAAGGTGTATCAGTTCAGGTTGTTTATGTATTAGTGATGCTATAATAAGCAGCATTGCATAGCCTGGTGCTGCACTCAGTGATATCTACGTCCTGAAATTTAGAATTGTTCTCTCTGGTGGGGCTGGTTAGGAGTGCAAGTTGAAATCGACAAAACCGATGAAACCGATGAAGCCGAGTATAAAATGGGTTTGGTTCGACTTTGATTCAGCTCGGTTTCATCGATTTTGTTGGTTTAAACTTCGCTCTTAACCTCAAGAAAATGAGTAAATACACAAAATTTGAAGTACTTATTAAATATTTTTTTTAATTAGACTCAAA

mRNA sequence

CTCTGCTTTGCGATCGTCGTTTTGTATGAAGTATGGGGGCATTCAGAGTTCTGGGCGGAAAGCTGATCAACCTCAGAACTCAACTCCATCATTCACCTCAGAACATTTCGATTCCGGCCGCCCTGCTCTGCCGTACATTTCTGACCTCCAACTCTTCCAAGGGCCTTAGATCGTTCTCACATCCATGGCGGTACACTCATTGCAGAACTCTCATTTTGGAGTCATTGTTTTCTGAGTCTGTCCGTCTTCACCGACTTTCAGACTCCGATTCTGGCATTGTTGAGGTACATTTAGCCAGGCCTGAGGTGAAAAATGCCATTGACAAGGATATGCTGAGGGGACTGCGTCATGCCTTTGAATCTGTTGATAGCGATCCATCTGCCAATGTTATGATGATCTGCAGCTCTGTCCCAAAGGTGTTTTGTGCAGGTGCCGATTTGAAGGAACGTAAGGAGATGACTGCATCAGAAGTTCATTCCTATGTCACCTCACTGCGGTCTGCATTCACATTTTTGGAGGGACTGTGTATTCCTACTATTTCAGTTATTGAAGGAGCAGCGTTCGGTGGTGGACTCGAAATGGCTCTTGCGTGTGATCTTCGGATATGTGGTGGGACTGCAAGGCTTCCCAGGCTTGTTGGGAAATCAATAGCAAAGGAACTTATATTCACTGGTCGTAAGGGTCCACTAGCAATAAAGATGGCGAAGAAGGCGATCGACGAGGGGCTCGAGGGAGACCTGGAATCAGCTATGGAAGTAGAAGATGAATGTTACAAAGAACTCTTAGACACGAAAGATCGCTTGGAAGGATTGACAGCATTTGCCGAGAAGCGCAAGCCGAGATATTGAGGAGAATAGATAGGTACCTGAAATGAGAGAGAGCTTCAGAAGGTGTATCAGTTCAGGTTGTTTATGTATTAGTGATGCTATAATAAGCAGCATTGCATAGCCTGGTGCTGCACTCAGTGATATCTACGTCCTGAAATTTAGAATTGTTCTCTCTGGTGGGGCTGGTTAGGAGTGCAAGTTGAAATCGACAAAACCGATGAAACCGATGAAGCCGAGTATAAAATGGGTTTGGTTCGACTTTGATTCAGCTCGGTTTCATCGATTTTGTTGGTTTAAACTTCGCTCTTAACCTCAAGAAAATGAGTAAATACACAAAATTTGAAGTACTTATTAAATATTTTTTTTAATTAGACTCAAA

Coding sequence (CDS)

ATGGGGGCATTCAGAGTTCTGGGCGGAAAGCTGATCAACCTCAGAACTCAACTCCATCATTCACCTCAGAACATTTCGATTCCGGCCGCCCTGCTCTGCCGTACATTTCTGACCTCCAACTCTTCCAAGGGCCTTAGATCGTTCTCACATCCATGGCGGTACACTCATTGCAGAACTCTCATTTTGGAGTCATTGTTTTCTGAGTCTGTCCGTCTTCACCGACTTTCAGACTCCGATTCTGGCATTGTTGAGGTACATTTAGCCAGGCCTGAGGTGAAAAATGCCATTGACAAGGATATGCTGAGGGGACTGCGTCATGCCTTTGAATCTGTTGATAGCGATCCATCTGCCAATGTTATGATGATCTGCAGCTCTGTCCCAAAGGTGTTTTGTGCAGGTGCCGATTTGAAGGAACGTAAGGAGATGACTGCATCAGAAGTTCATTCCTATGTCACCTCACTGCGGTCTGCATTCACATTTTTGGAGGGACTGTGTATTCCTACTATTTCAGTTATTGAAGGAGCAGCGTTCGGTGGTGGACTCGAAATGGCTCTTGCGTGTGATCTTCGGATATGTGGTGGGACTGCAAGGCTTCCCAGGCTTGTTGGGAAATCAATAGCAAAGGAACTTATATTCACTGGTCGTAAGGGTCCACTAGCAATAAAGATGGCGAAGAAGGCGATCGACGAGGGGCTCGAGGGAGACCTGGAATCAGCTATGGAAGTAGAAGATGAATGTTACAAAGAACTCTTAGACACGAAAGATCGCTTGGAAGGATTGACAGCATTTGCCGAGAAGCGCAAGCCGAGATATTGA

Homology

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BLAST of CmoCh16G011650.1 vs. Swiss-Prot
Match: ECH2M_ARATH (Probable enoyl-CoA hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=At4g16800 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.5e-69
Identity = 152/282 (53.90%), Postives = 184/282 (65.25%), Query Frame = 1


Query: 44  GLRSFSHPWRYTHCRTLILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRG 103
           G  S S  +    CRTLI+E+   E V+L+RLS SDSGI+EV+L RP  KNAI+K+ML+ 
Sbjct: 17  GKPSLSRNYILQTCRTLIIETSPPEFVKLNRLSGSDSGIIEVNLDRPVTKNAINKEMLKS 76

Query: 104 LRHAFESVDSDPSANVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEG 163
           L++AFES+  D SA V+MI S VP VFCAGADLKER+ M+ SEVH+YV SLR  F+F+E 
Sbjct: 77  LQNAFESIHQDNSARVVMIRSLVPGVFCAGADLKERRTMSPSEVHTYVNSLRYMFSFIEA 136

Query: 164 LCIPTISVIEGAAFGGGLEMALACDLRIC-------------------GGTARLPRLVGK 223
           L IPTI+ IEGAA GGGLEMALACDLRIC                   GGT RL RLVG+
Sbjct: 137 LSIPTIAAIEGAALGGGLEMALACDLRICGENAVFGLPETGLAIIPGAGGTQRLSRLVGR 196

Query: 224 SIAKELIFTGRKGP-----------------------------------LAIKMAKKAID 272
           S++KELIFTGRK                                     LAIKMAKKAID
Sbjct: 197 SVSKELIFTGRKIDAIEAANKGLVNICVTAGEAHEKAIEMAQQINEKGPLAIKMAKKAID 256

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BLAST of CmoCh16G011650.1 vs. Swiss-Prot
Match: AUHM_MOUSE (Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37
Identity = 96/262 (36.64%), Postives = 139/262 (53.05%), Query Frame = 1


Query: 68  ESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVMMICSSVP 127
           + +R+  L + + GIV + + R   KNA+ K++L+ L  A +++ SD     ++I S VP
Sbjct: 50  DELRVRHLEEENRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVP 109

Query: 128 KVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGGLEMALAC 187
            +FCAGADLKER +M +SEV  +V+ +RS    +  L +PTI+ I+G A GGGLE+ALAC
Sbjct: 110 GIFCAGADLKERAKMHSSEVGPFVSKIRSVINDIANLPVPTIAAIDGLALGGGLELALAC 169

Query: 188 DLRIC-------------------GGTARLPRLVGKSIAKELIFTGR----KGPLAIKMA 247
           D+R+                    GGT RLPR +G S+AKELIF+ R    +   A+ + 
Sbjct: 170 DIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLI 229

Query: 248 KKAIDEGLEGD------LESAME-----------------------------VEDECYKE 272
              +++  EGD      L+ A E                             +E+ CY +
Sbjct: 230 SHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQ 289

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BLAST of CmoCh16G011650.1 vs. Swiss-Prot
Match: AUHM_HUMAN (Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.5e-37
Identity = 94/262 (35.88%), Postives = 140/262 (53.44%), Query Frame = 1


Query: 68  ESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVMMICSSVP 127
           + +R+  L + + GIV + + R   KN++ K++++ L  A +++ SD     ++I S VP
Sbjct: 75  DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVP 134

Query: 128 KVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGGLEMALAC 187
            +FCAGADLKER +M++SEV  +V+ +R+    +  L +PTI+ I+G A GGGLE+ALAC
Sbjct: 135 GIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALAC 194

Query: 188 DLRIC-------------------GGTARLPRLVGKSIAKELIFTGR----KGPLAIKMA 247
           D+R+                    GGT RLPR +G S+AKELIF+ R    K   A+ + 
Sbjct: 195 DIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLI 254

Query: 248 KKAIDEGLEGD------LESAME-----------------------------VEDECYKE 272
              +++  EGD      L+ A E                             +E+ CY +
Sbjct: 255 SHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQ 314

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BLAST of CmoCh16G011650.1 vs. Swiss-Prot
Match: AUHM_DICDI (Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.7e-33
Identity = 99/259 (38.22%), Postives = 130/259 (50.19%), Query Frame = 1


Query: 72  LHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVMMICSSVPKVFC 131
           L RL   + GI  +   R  VKNA+ K+++   R     +   P   V+++ S V  VFC
Sbjct: 47  LERLEGENKGISVISFNRGHVKNALGKNLMNQFRSHLNELRFCPDTRVVIVRSLVDGVFC 106

Query: 132 AGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGGLEMALACDLRI 191
           +GADLKER  M+  E   +V SLRS+FT LE L +PTI+ IEG A GGG EM LACD R+
Sbjct: 107 SGADLKERALMSQVEASQFVHSLRSSFTELETLQMPTIAAIEGVAVGGGTEMVLACDFRV 166

Query: 192 -------------------CGGTARLPRLVGKSIAKELIFTGRKGPLAIKMAKKAIDEGL 251
                               GGT RLPRL+G   AKELIFTG     AI  +K+A++ GL
Sbjct: 167 ASKSSKMGLPETGLAIIPGAGGTQRLPRLIGIPRAKELIFTG-----AILDSKRALEIGL 226

Query: 252 ------EGD-LESAME---------------------------------VEDECYKELLD 272
                 +G+  + A+E                                 +E   Y +++ 
Sbjct: 227 VQYETEKGEAFDKAIEIAKQIIPKGPIAIRMAKQAIDRGMNVDQASGMIIEQASYAQVIP 286

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BLAST of CmoCh16G011650.1 vs. Swiss-Prot
Match: ECHD2_MOUSE (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus GN=Echdc2 PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 5.7e-32
Identity = 91/279 (32.62%), Postives = 137/279 (49.10%), Query Frame = 1


Query: 52  WRYTHCRTLILESLF-SESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFES 111
           WR++  R     +   +  +++  L+  + GI E+ + RP  +NA+    +  L  A   
Sbjct: 15  WRFSGARDCASHATTRTPEIQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQ 74

Query: 112 VDSDPSANVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTIS 171
           +  D    V++  S+V  VFCAGADLKER++M+  EV ++V  LR   + +    +PTI+
Sbjct: 75  LREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDVEVGTFVQRLRGLMSEIAAFPVPTIA 134

Query: 172 VIEGAAFGGGLEMALACDLRI-------------------CGGTARLPRLVGKSIAKELI 231
            ++G A GGGLE+ALACDLRI                    GGT RLPR +G ++AKELI
Sbjct: 135 AMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELI 194

Query: 232 FTGRK--GPLA--IKMAKKAIDEGLEGDLE------------------------------ 272
           FTGR+  G  A  + +   A+ +  EG+                                
Sbjct: 195 FTGRRLNGAQARELGLVNHAVAQNEEGNAAYHRALALAQEILPQAPIAVRLGKVAIDRGM 254

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BLAST of CmoCh16G011650.1 vs. TrEMBL
Match: A0A0A0L6S6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017300 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-98
Identity = 208/325 (64.00%), Postives = 224/325 (68.92%), Query Frame = 1


Query: 1   MGAFRVLGGKLINLRTQLHHSPQNISIPAALLCRTFLTSNSSKGLRSFSHPWRYTHCRTL 60
           MGAF++    LINL  +L HS QN+ IPA  L +T  +S  S     FSHPWRYTHCRTL
Sbjct: 1   MGAFKIRSRNLINLPIELLHSSQNLPIPAKNLRQTVPSSTPSDAFNLFSHPWRYTHCRTL 60

Query: 61  ILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVM 120
           IL+SL ++ VRLHRLSDSDSGIVE+HL RPE KNAI KDMLRGLRHAFESVDSDPS NVM
Sbjct: 61  ILDSLSTKPVRLHRLSDSDSGIVEIHLDRPEAKNAISKDMLRGLRHAFESVDSDPSVNVM 120

Query: 121 MICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGG 180
           MI SSVPKVFCAGADLKERK+M ASEVHS+VTSLRSAFTFLE L IPTISVIEGAA GGG
Sbjct: 121 MIRSSVPKVFCAGADLKERKKMAASEVHSFVTSLRSAFTFLEALPIPTISVIEGAALGGG 180

Query: 181 LEMALACDLRIC-------------------GGTARLPRLVGKSIAKELIFTGRK----- 240
           LEMALACDLRIC                   GGTARLPRLVGKSIAKELIFTGRK     
Sbjct: 181 LEMALACDLRICGEDAKLSLPETGLAIIPGAGGTARLPRLVGKSIAKELIFTGRKVSGRD 240

Query: 241 -------------GPLAIKMAKKAIDEGLEGDLE-----------------SAMEVEDEC 272
                        G    K  + A +   +G L                  SAME+EDEC
Sbjct: 241 ALSIGLVNYCVSAGEAYTKALEIAQEINEKGPLAIRMAKKAINEGLEGDLESAMEIEDEC 300

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BLAST of CmoCh16G011650.1 vs. TrEMBL
Match: A0A067L5Z9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03456 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.1e-77
Identity = 165/268 (61.57%), Postives = 187/268 (69.78%), Query Frame = 1


Query: 58  RTLILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSA 117
           RTLIL+SL SESV+L R SDSDSGI+EV+L R   KNAI K+MLRGL++ FE++  D SA
Sbjct: 55  RTLILDSLVSESVKLQRFSDSDSGIIEVNLDRAGAKNAIGKEMLRGLQYTFETISKDDSA 114

Query: 118 NVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAF 177
           +V+MICSSVPKVFCAGADLKERK MT SEV  +V  LRS F F+E LCIPTI+VIEGAA 
Sbjct: 115 SVVMICSSVPKVFCAGADLKERKTMTPSEVQDFVNRLRSTFLFIEELCIPTIAVIEGAAL 174

Query: 178 GGGLEMALACDLRIC-------------------GGTARLPRLVGKSIAKELIFTGRKG- 237
           GGGLEMALACDLRIC                   GGT RLPRLVGKS+AKELIFTGRK  
Sbjct: 175 GGGLEMALACDLRICGEDAVLGLPETGLAIIPGAGGTQRLPRLVGKSVAKELIFTGRKVG 234

Query: 238 ----------------------------------PLAIKMAKKAIDEGLEGDLESAMEVE 272
                                             PLAIKMAKKAI+EGLE DL SA+E+E
Sbjct: 235 GREASSIGLVNYSVPAGEARTKALEIAREVNQKGPLAIKMAKKAINEGLEADLASALELE 294

[Close]

BLAST of CmoCh16G011650.1 vs. TrEMBL
Match: B9T286_RICCO (Methylglutaconyl-CoA hydratase, mitochondrial, putative OS=Ricinus communis GN=RCOM_0191380 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.1e-77
Identity = 162/268 (60.45%), Postives = 192/268 (71.64%), Query Frame = 1


Query: 58  RTLILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSA 117
           RTLILES+ SESV+L RL DSDSGI+EV+L RP  KNAI K+MLRGLR+ FE++++D SA
Sbjct: 55  RTLILESVSSESVKLKRLPDSDSGIMEVNLDRPGAKNAIGKEMLRGLRNTFETINNDASA 114

Query: 118 NVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAF 177
           NV+MICSSVPKVFCAGADLKERK MT SEV  +V SLRS F+ +E LCIPTI+VIEGAA 
Sbjct: 115 NVVMICSSVPKVFCAGADLKERKIMTPSEVQFFVNSLRSTFSLVEDLCIPTIAVIEGAAL 174

Query: 178 GGGLEMALACDLRIC-------------------GGTARLPRLVGKSIAKELIFTGR--- 237
           GGGLEMAL+CDLRIC                   GGT RLPRLVGKS+AKELIFTGR   
Sbjct: 175 GGGLEMALSCDLRICGEDAVLGLPETGLAIIPGAGGTQRLPRLVGKSVAKELIFTGRKIG 234

Query: 238 --------------------------------KGPLAIKMAKKAIDEGLEGDLESAMEVE 272
                                           KGP+AI+MAKKAI+EGL+ D+ SA+E+E
Sbjct: 235 GREAMSMGLVNYSVPAGEARLKALEVAREINQKGPIAIRMAKKAINEGLKVDMASALELE 294

[Close]

BLAST of CmoCh16G011650.1 vs. TrEMBL
Match: A0A061G4B1_THECC (ATP-dependent caseinolytic protease/crotonase family protein OS=Theobroma cacao GN=TCM_015894 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-76
Identity = 164/286 (57.34%), Postives = 196/286 (68.53%), Query Frame = 1


Query: 40  NSSKGLRSFSHPWRYTHCRTLILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKD 99
           N +KG+   ++  ++   RTLILE   SESV+L RL  SDSGIVEV+L RP  +NAI  D
Sbjct: 562 NQTKGIPISNYKLQFQTLRTLILEPSLSESVKLRRLPGSDSGIVEVNLERPGARNAIGND 621

Query: 100 MLRGLRHAFESVDSDPSANVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFT 159
           MLRGLRHAFE++D D SA+V++I SSVP VFCAGADLKERK+MTASEVHSYV  LRS F+
Sbjct: 622 MLRGLRHAFEAIDGDSSAHVVLISSSVPNVFCAGADLKERKKMTASEVHSYVNYLRSTFS 681

Query: 160 FLEGLCIPTISVIEGAAFGGGLEMALACDLRIC-------------------GGTARLPR 219
            +E L IPTI+VIEGAA GGGLEMAL+CDLRIC                   GGT RLPR
Sbjct: 682 LIEELQIPTIAVIEGAALGGGLEMALSCDLRICGENAMLGLPETGLAIIPGAGGTQRLPR 741

Query: 220 LVGKSIAKELIFTGR-----------------------------------KGPLAIKMAK 272
           LVG+SIAKELIFT R                                   KGP+AI+MAK
Sbjct: 742 LVGQSIAKELIFTARRIGGRDAMSMGLVNYCVPAGEAHPKGLEIAREINQKGPIAIRMAK 801

[Close]

BLAST of CmoCh16G011650.1 vs. TrEMBL
Match: S8D3W8_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_02653 PE=3 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.1e-72
Identity = 158/281 (56.23%), Postives = 191/281 (67.97%), Query Frame = 1


Query: 45  LRSFSHPWRYTHCRTLILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGL 104
           +RS S+ +R    RTL+L S  SESV+LH+ +DSDSGI+EV+L  PE KN+I KDML GL
Sbjct: 11  MRSASNLFRLQIIRTLLLRSA-SESVKLHKFTDSDSGILEVNLKSPEAKNSIGKDMLIGL 70

Query: 105 RHAFESVDSDPSANVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGL 164
           + A E+V++DP A V++I SSVP+VFCAGADLKERKEMTASEV ++V SLRS F++LE +
Sbjct: 71  KQALETVNADPVAKVLLISSSVPRVFCAGADLKERKEMTASEVRNFVHSLRSTFSYLEAI 130

Query: 165 CIPTISVIEGAAFGGGLEMALACDLRIC-------------------GGTARLPRLVGKS 224
            IPTI+VIEGAA GGGLEMAL+CDLRIC                   GGT RLPRLVGKS
Sbjct: 131 RIPTIAVIEGAALGGGLEMALSCDLRICGKDAVLGLPETSLAIIPGAGGTQRLPRLVGKS 190

Query: 225 IAKELIFTGRKG-----------------------------------PLAIKMAKKAIDE 272
           +AKELIFTGRK                                    P+AI+MAK+AID 
Sbjct: 191 VAKELIFTGRKVDSADAFSMGLVNHCVPAGEARVKALEIAREIIQKGPIAIRMAKRAIDG 250

[Close]

BLAST of CmoCh16G011650.1 vs. TAIR10
Match: AT4G16800.1 (AT4G16800.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein)

HSP 1 Score: 262.7 bits (670), Expect = 2.5e-70
Identity = 152/282 (53.90%), Postives = 184/282 (65.25%), Query Frame = 1


Query: 44  GLRSFSHPWRYTHCRTLILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRG 103
           G  S S  +    CRTLI+E+   E V+L+RLS SDSGI+EV+L RP  KNAI+K+ML+ 
Sbjct: 17  GKPSLSRNYILQTCRTLIIETSPPEFVKLNRLSGSDSGIIEVNLDRPVTKNAINKEMLKS 76

Query: 104 LRHAFESVDSDPSANVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEG 163
           L++AFES+  D SA V+MI S VP VFCAGADLKER+ M+ SEVH+YV SLR  F+F+E 
Sbjct: 77  LQNAFESIHQDNSARVVMIRSLVPGVFCAGADLKERRTMSPSEVHTYVNSLRYMFSFIEA 136

Query: 164 LCIPTISVIEGAAFGGGLEMALACDLRIC-------------------GGTARLPRLVGK 223
           L IPTI+ IEGAA GGGLEMALACDLRIC                   GGT RL RLVG+
Sbjct: 137 LSIPTIAAIEGAALGGGLEMALACDLRICGENAVFGLPETGLAIIPGAGGTQRLSRLVGR 196

Query: 224 SIAKELIFTGRKGP-----------------------------------LAIKMAKKAID 272
           S++KELIFTGRK                                     LAIKMAKKAID
Sbjct: 197 SVSKELIFTGRKIDAIEAANKGLVNICVTAGEAHEKAIEMAQQINEKGPLAIKMAKKAID 256

[Close]

BLAST of CmoCh16G011650.1 vs. TAIR10
Match: AT3G06860.1 (AT3G06860.1 multifunctional protein 2)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-09
Identity = 49/158 (31.01%), Postives = 72/158 (45.57%), Query Frame = 1


Query: 81  GIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVMMICSSVPKVFCAGADLKERK 140
           G+  + L  P V N++  D+L  L+  +E   S      ++I  +  + F  G D+    
Sbjct: 17  GVAVITLINPPV-NSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGR-FSGGFDISGFG 76

Query: 141 EMTASEVHS----YVTSLRSAFTFLEGLCIPTISVIEGAAFGGGLEMALACDLRIC---- 200
           EM    V      Y+ S+      LE    P+++ I+G A GGGLE+A+AC  RI     
Sbjct: 77  EMQKGNVKEPKAGYI-SIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAA 136

Query: 201 ---------------GGTARLPRLVGKSIAKELIFTGR 216
                          GGT RLPRLVG + A E+I T +
Sbjct: 137 QLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSK 171

[Close]

BLAST of CmoCh16G011650.1 vs. TAIR10
Match: AT1G60550.1 (AT1G60550.1 enoyl-CoA hydratase/isomerase D)

HSP 1 Score: 55.8 bits (133), Expect = 4.7e-08
Identity = 41/157 (26.11%), Postives = 68/157 (43.31%), Query Frame = 1


Query: 79  DSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVMMICSSVPKVFCAGADLKE 138
           D GI ++ + RPE +NA     ++ L  AF     D S  V+++     K FC+G D   
Sbjct: 84  DEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAL 143

Query: 139 RKEMTASEVHSY-VTSLRSAFTFLEGLCIPTISVIEGAAFGGGLEMALACDLRICG---- 198
           R +   ++ +     ++      +  L  P I+++ G A GGG  + + CDL I      
Sbjct: 144 RTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAI 203

Query: 199 ---------------GTARLPRLVGKSIAKELIFTGR 216
                          G++ + RLVG   A+E+ F  R
Sbjct: 204 FGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFMTR 240

[Close]

BLAST of CmoCh16G011650.1 vs. TAIR10
Match: AT4G29010.1 (AT4G29010.1 Enoyl-CoA hydratase/isomerase family)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 38/158 (24.05%), Postives = 72/158 (45.57%), Query Frame = 1


Query: 79  DSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVMMICSSVPKVFCAGADLKE 138
           + G+  + ++ P V N++   ++ GL+  F   +       +++  +  + F  G D+  
Sbjct: 13  NDGVAVITISNPPV-NSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGR-FSGGFDINV 72

Query: 139 RKEMTASEVHSYV--TSLRSAFTFLEGLCIPTISVIEGAAFGGGLEMALACDLRIC---- 198
            +++  +   S +   S+      +E    P ++ +EG A GGGLE+A+AC  R+     
Sbjct: 73  FQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVAAPKA 132

Query: 199 ---------------GGTARLPRLVGKSIAKELIFTGR 216
                          GGT RLPRLVG + A ++I   +
Sbjct: 133 QLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSK 168

[Close]

BLAST of CmoCh16G011650.1 vs. NCBI nr
Match: gi|659095860|ref|XP_008448801.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 424.1 bits (1089), Expect = 1.8e-115
Identity = 232/325 (71.38%), Postives = 243/325 (74.77%), Query Frame = 1


Query: 1   MGAFRVLGGKLINLRTQLHHSPQNISIPAALLCRTFLTSNSSKGLRSFSHPWRYTHCRTL 60
           MGAF++    LINLR QL+ SPQN+ IPA  L +TF +S  S    SFSHPWRYTHCR L
Sbjct: 1   MGAFKIRCRNLINLRIQLNRSPQNLPIPANNLRQTFPSSTPSDAFNSFSHPWRYTHCRNL 60

Query: 61  ILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVM 120
           IL+SL ++ VRLHRLSDSDSGIVEVHL RPE KNAI KDMLRGLRHAFESVDSDPS NVM
Sbjct: 61  ILDSLSTKPVRLHRLSDSDSGIVEVHLDRPEAKNAISKDMLRGLRHAFESVDSDPSVNVM 120

Query: 121 MICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGG 180
           MICSSVPKVFCAGADLKERK+MTASEVHS+VTSLRSAFTFLE L IPTISVIEGAA GGG
Sbjct: 121 MICSSVPKVFCAGADLKERKKMTASEVHSFVTSLRSAFTFLEALPIPTISVIEGAALGGG 180

Query: 181 LEMALACDLRIC-------------------GGTARLPRLVGKSIAKELIFTGRK----- 240
           LEMALACDLRIC                   GGTARLPRLVGKSIAKELIFTGRK     
Sbjct: 181 LEMALACDLRICGEDAKLSLPETGLAIIPGAGGTARLPRLVGKSIAKELIFTGRKVSGRD 240

Query: 241 ------------------------------GPLAIKMAKKAIDEGLEGDLESAMEVEDEC 272
                                         GPLAIKMAKKAIDEGLEGDLESAMEVEDEC
Sbjct: 241 ALSIGLVNYCVPAGEAYAKALEIAQEINQKGPLAIKMAKKAIDEGLEGDLESAMEVEDEC 300

[Close]

BLAST of CmoCh16G011650.1 vs. NCBI nr
Match: gi|659095858|ref|XP_008448800.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 421.0 bits (1081), Expect = 1.6e-114
Identity = 232/333 (69.67%), Postives = 243/333 (72.97%), Query Frame = 1


Query: 1   MGAFRVLGGKLINLRTQLHHSPQNISIPAALLCRTFLTSNSSKGLRSFSHPWRYTHCRTL 60
           MGAF++    LINLR QL+ SPQN+ IPA  L +TF +S  S    SFSHPWRYTHCR L
Sbjct: 1   MGAFKIRCRNLINLRIQLNRSPQNLPIPANNLRQTFPSSTPSDAFNSFSHPWRYTHCRNL 60

Query: 61  ILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVM 120
           IL+SL ++ VRLHRLSDSDSGIVEVHL RPE KNAI KDMLRGLRHAFESVDSDPS NVM
Sbjct: 61  ILDSLSTKPVRLHRLSDSDSGIVEVHLDRPEAKNAISKDMLRGLRHAFESVDSDPSVNVM 120

Query: 121 MICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGG 180
           MICSSVPKVFCAGADLKERK+MTASEVHS+VTSLRSAFTFLE L IPTISVIEGAA GGG
Sbjct: 121 MICSSVPKVFCAGADLKERKKMTASEVHSFVTSLRSAFTFLEALPIPTISVIEGAALGGG 180

Query: 181 LEMALACDLRIC---------------------------GGTARLPRLVGKSIAKELIFT 240
           LEMALACDLRIC                           GGTARLPRLVGKSIAKELIFT
Sbjct: 181 LEMALACDLRICAHMVGHDLGEDAKLSLPETGLAIIPGAGGTARLPRLVGKSIAKELIFT 240

Query: 241 GRK-----------------------------------GPLAIKMAKKAIDEGLEGDLES 272
           GRK                                   GPLAIKMAKKAIDEGLEGDLES
Sbjct: 241 GRKVSGRDALSIGLVNYCVPAGEAYAKALEIAQEINQKGPLAIKMAKKAIDEGLEGDLES 300

[Close]

BLAST of CmoCh16G011650.1 vs. NCBI nr
Match: gi|700200703|gb|KGN55836.1| (hypothetical protein Csa_3G017300 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 4.6e-98
Identity = 208/325 (64.00%), Postives = 224/325 (68.92%), Query Frame = 1


Query: 1   MGAFRVLGGKLINLRTQLHHSPQNISIPAALLCRTFLTSNSSKGLRSFSHPWRYTHCRTL 60
           MGAF++    LINL  +L HS QN+ IPA  L +T  +S  S     FSHPWRYTHCRTL
Sbjct: 1   MGAFKIRSRNLINLPIELLHSSQNLPIPAKNLRQTVPSSTPSDAFNLFSHPWRYTHCRTL 60

Query: 61  ILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVM 120
           IL+SL ++ VRLHRLSDSDSGIVE+HL RPE KNAI KDMLRGLRHAFESVDSDPS NVM
Sbjct: 61  ILDSLSTKPVRLHRLSDSDSGIVEIHLDRPEAKNAISKDMLRGLRHAFESVDSDPSVNVM 120

Query: 121 MICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGG 180
           MI SSVPKVFCAGADLKERK+M ASEVHS+VTSLRSAFTFLE L IPTISVIEGAA GGG
Sbjct: 121 MIRSSVPKVFCAGADLKERKKMAASEVHSFVTSLRSAFTFLEALPIPTISVIEGAALGGG 180

Query: 181 LEMALACDLRIC-------------------GGTARLPRLVGKSIAKELIFTGRK----- 240
           LEMALACDLRIC                   GGTARLPRLVGKSIAKELIFTGRK     
Sbjct: 181 LEMALACDLRICGEDAKLSLPETGLAIIPGAGGTARLPRLVGKSIAKELIFTGRKVSGRD 240

Query: 241 -------------GPLAIKMAKKAIDEGLEGDLE-----------------SAMEVEDEC 272
                        G    K  + A +   +G L                  SAME+EDEC
Sbjct: 241 ALSIGLVNYCVSAGEAYTKALEIAQEINEKGPLAIRMAKKAINEGLEGDLESAMEIEDEC 300

[Close]

BLAST of CmoCh16G011650.1 vs. NCBI nr
Match: gi|778675284|ref|XP_011650382.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 3.9e-97
Identity = 208/333 (62.46%), Postives = 224/333 (67.27%), Query Frame = 1


Query: 1   MGAFRVLGGKLINLRTQLHHSPQNISIPAALLCRTFLTSNSSKGLRSFSHPWRYTHCRTL 60
           MGAF++    LINL  +L HS QN+ IPA  L +T  +S  S     FSHPWRYTHCRTL
Sbjct: 1   MGAFKIRSRNLINLPIELLHSSQNLPIPAKNLRQTVPSSTPSDAFNLFSHPWRYTHCRTL 60

Query: 61  ILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSDPSANVM 120
           IL+SL ++ VRLHRLSDSDSGIVE+HL RPE KNAI KDMLRGLRHAFESVDSDPS NVM
Sbjct: 61  ILDSLSTKPVRLHRLSDSDSGIVEIHLDRPEAKNAISKDMLRGLRHAFESVDSDPSVNVM 120

Query: 121 MICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEGAAFGGG 180
           MI SSVPKVFCAGADLKERK+M ASEVHS+VTSLRSAFTFLE L IPTISVIEGAA GGG
Sbjct: 121 MIRSSVPKVFCAGADLKERKKMAASEVHSFVTSLRSAFTFLEALPIPTISVIEGAALGGG 180

Query: 181 LEMALACDLRIC---------------------------GGTARLPRLVGKSIAKELIFT 240
           LEMALACDLRIC                           GGTARLPRLVGKSIAKELIFT
Sbjct: 181 LEMALACDLRICAHMVGHDPGEDAKLSLPETGLAIIPGAGGTARLPRLVGKSIAKELIFT 240

Query: 241 GRK------------------GPLAIKMAKKAIDEGLEGDLE-----------------S 272
           GRK                  G    K  + A +   +G L                  S
Sbjct: 241 GRKVSGRDALSIGLVNYCVSAGEAYTKALEIAQEINEKGPLAIRMAKKAINEGLEGDLES 300

[Close]

BLAST of CmoCh16G011650.1 vs. NCBI nr
Match: gi|743908280|ref|XP_011047589.1| (PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial-like [Populus euphratica])

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78
Identity = 165/271 (60.89%), Postives = 193/271 (71.22%), Query Frame = 1


Query: 55  THCRTLILESLFSESVRLHRLSDSDSGIVEVHLARPEVKNAIDKDMLRGLRHAFESVDSD 114
           TH   LIL+SL SESVRL RLSDSDSGIVEV+L RP  KN+I K+MLRGLR+AFE+++SD
Sbjct: 38  THRTLLILDSLSSESVRLRRLSDSDSGIVEVNLDRPAAKNSIGKEMLRGLRNAFETIESD 97

Query: 115 PSANVMMICSSVPKVFCAGADLKERKEMTASEVHSYVTSLRSAFTFLEGLCIPTISVIEG 174
            SA V++ICSSVPKVFCAGADLKERK MT SEV  +V SLRS F+ +E LC+PT++VIEG
Sbjct: 98  ISAQVVLICSSVPKVFCAGADLKERKTMTPSEVQDFVNSLRSTFSLIEALCVPTVAVIEG 157

Query: 175 AAFGGGLEMALACDLRIC-------------------GGTARLPRLVGKSIAKELIFTGR 234
           AA GGGLEMAL+CDLRIC                   GGT RLPRL+GKS+AKELIFTGR
Sbjct: 158 AALGGGLEMALSCDLRICGEDAVLGLPETGLAIIPGAGGTQRLPRLIGKSLAKELIFTGR 217

Query: 235 K-----------------------------------GPLAIKMAKKAIDEGLEGDLESAM 272
           K                                   GP+AI+MAKKAI+EGLE DL SA+
Sbjct: 218 KIDGREAMSMGLVNYSVPVGEAHSKALEIAREIIQKGPIAIRMAKKAINEGLEIDLPSAL 277

The following BLAST results are available for this feature:

BLAST of CmoCh16G011650.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ECH2M_ARATH	4.5e-69	53.90	Probable enoyl-CoA hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=At4g168...	[more]
AUHM_MOUSE	2.6e-37	36.64	Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=1 SV=1	[more]
AUHM_HUMAN	4.5e-37	35.88	Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1	[more]
AUHM_DICDI	6.7e-33	38.22	Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh...	[more]
ECHD2_MOUSE	5.7e-32	32.62	Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus G...	[more]

BLAST of CmoCh16G011650.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6S6_CUCSA	3.2e-98	64.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017300 PE=3 SV=1	[more]
A0A067L5Z9_JATCU	3.1e-77	61.57	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03456 PE=3 SV=1	[more]
B9T286_RICCO	4.1e-77	60.45	Methylglutaconyl-CoA hydratase, mitochondrial, putative OS=Ricinus communis GN=R...	[more]
A0A061G4B1_THECC	1.2e-76	57.34	ATP-dependent caseinolytic protease/crotonase family protein OS=Theobroma cacao ...	[more]
S8D3W8_9LAMI	5.1e-72	56.23	Uncharacterized protein OS=Genlisea aurea GN=M569_02653 PE=3 SV=1	[more]

BLAST of CmoCh16G011650.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16800.1	2.5e-70	53.90	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT3G06860.1	1.9e-09	31.01	multifunctional protein 2	[more]
AT1G60550.1	4.7e-08	26.11	enoyl-CoA hydratase/isomerase D	[more]
AT4G29010.1	1.8e-07	24.05	Enoyl-CoA hydratase/isomerase family	[more]

BLAST of CmoCh16G011650.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095860\|ref\|XP_008448801.1\|	1.8e-115	71.38	PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X2 [Cucumis mel...	[more]
gi\|659095858\|ref\|XP_008448800.1\|	1.6e-114	69.67	PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial isoform X1 [Cucumis mel...	[more]
gi\|700200703\|gb\|KGN55836.1\|	4.6e-98	64.00	hypothetical protein Csa_3G017300 [Cucumis sativus]	[more]
gi\|778675284\|ref\|XP_011650382.1\|	3.9e-97	62.46	PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Cucumis sativus]	[more]
gi\|743908280\|ref\|XP_011047589.1\|	1.1e-78	60.89	PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial-like [Populus euphratic...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001753	Enoyl-CoA_hydra/iso
IPR014748	Enoyl-CoA_hydra_C
IPR018376	Enoyl-CoA_hyd/isom_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh16G011650	CmoCh16G011650	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh16G011650.1	CmoCh16G011650.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G011650.1.exon.7	CmoCh16G011650.1.exon.7	exon
CmoCh16G011650.1.exon.6	CmoCh16G011650.1.exon.6	exon
CmoCh16G011650.1.exon.5	CmoCh16G011650.1.exon.5	exon
CmoCh16G011650.1.exon.4	CmoCh16G011650.1.exon.4	exon
CmoCh16G011650.1.exon.3	CmoCh16G011650.1.exon.3	exon
CmoCh16G011650.1.exon.2	CmoCh16G011650.1.exon.2	exon
CmoCh16G011650.1.exon.1	CmoCh16G011650.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G011650.1.five_prime_UTR.1	CmoCh16G011650.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G011650.1.CDS.1	CmoCh16G011650.1.CDS.1	CDS
CmoCh16G011650.1.CDS.2	CmoCh16G011650.1.CDS.2	CDS
CmoCh16G011650.1.CDS.3	CmoCh16G011650.1.CDS.3	CDS
CmoCh16G011650.1.CDS.4	CmoCh16G011650.1.CDS.4	CDS
CmoCh16G011650.1.CDS.5	CmoCh16G011650.1.CDS.5	CDS
CmoCh16G011650.1.CDS.6	CmoCh16G011650.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh16G011650.1.three_prime_UTR.1	CmoCh16G011650.1.three_prime_UTR.1	three_prime_UTR
CmoCh16G011650.1.three_prime_UTR.2	CmoCh16G011650.1.three_prime_UTR.2	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001753	Crotonase superfamily	PFAM	PF00378	ECH_1	coord: 216..271 score: 1.5E-6coord: 79..197 score: 3.0
IPR014748	Crontonase, C-terminal	GENE3D	G3DSA:1.10.12.10		coord: 217..271 score: 3.2
IPR018376	Enoyl-CoA hydratase/isomerase, conserved site	PROSITE	PS00166	ENOYL_COA_HYDRATASE	coord: 169..189 scor
None	No IPR available	PANTHER	PTHR11941	ENOYL-COA HYDRATASE-RELATED	coord: 60..271 score: 2.4
None	No IPR available	PANTHER	PTHR11941:SF61	PROTEIN ECH-5	coord: 60..271 score: 2.4