CmoCh16G003950.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh16G003950.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr16 : 1823225 .. 1827103 (+)
Sequence length666
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATACTCAAACTCGGCCAATGCTACCATGTGCGGCCCCATGACATGCTAACAGGTACTCACTTCAGAAAGATGTATATCTATAAGTAATGCACATCCACATCCACAATGACAAGCAAACTCTAGAGTATGATGTTCTTACTGAGAAACAGTACCCAATTCAGCAGGCAAAGAGTTCTTGTAAGCCTCAGAGATACCGACAGCAGTCTTGGAGAGGTTGCTTCTCATATCTGAGATTTTGGATCTAACAAATTCTTTATATTGTGAGACAGAGTCAACACATGCAACTAGTTCACGAGCACATATCAGAATCTCTTCCTCTCCTTGCTTTATTGCTTCCTCATGCTTCACTTTCGCATTCTTCATACAATCACAGATCACAGTAAGTTTGGAGCAGATTCTAATTAAATAAACCAGACTGGAGTGGTGGAATGGCTTATAACAGTTACTAGTTAAGTGCTTTCCCTCCCAACTTAGGTGCAATACTTATAGAAATCTCTAACAAGCCCGACTTGGTTGCATTAACGAGCGTTAACGAAAGATTGATTACCAGTCGATCTAGATTTTGGACAAATCTACAAAGAAATTATCAATCAATCTTTATAAGTTGCGGGTGAAACACATCTCCAGTTCACATATCTGCACTTAGTTTCTATTTGATCCCTTAGTTTTCAAAGATAACACACTTTTGATCATTGAGATTTGAGCAAAGACAAAGACAAAGGGTTTTGTTTAGTGAAGGTGAATGGATTTTAGCACTCAAATAAAGGAGAGAGAGCAAAGTAGGAGGAACAAGAGTAGCGGAAGAAAGTGTTAGGAATCACGGATCTCCACAATGGTATGATATTATCCACTTTGAGCATAAGCTCCCGTGACTTTGTTTTGGGCTTTCCAAAAGGCCTCACACCAATAGAGATGCATTCCTAAACCCGTTATCATTCCCAAAATTAGCCAATATCAAAAAGCAAGAAAAAAAGGCTACACAAGCTAACAAAGTTTCAAACTCAGATAGTCAAGAGAACTAGTCAGGAAGTTAACGGCCAAATCATGATTCAGTTAGCCAACCGATAGTCAAGAGACCTTTAAGAACCATTTCTTAAGACAGTAATTATAGTGGGAGTATTAATACCTTCAAAAGCTCCCCTGCTTCTCTTTCCACGACATCTATGCTATGAGCTTCTAGTTGAAGATCCTCCACCATCTTCTTTGATTCTGTGGAGCATCTTAATGTATAATCTCGTATTTCATTTCTTAAAGAGTTCACTTGAGTTTCACCCTGAAAAATAGAAACCATTTACATGATCAGCAAATCATTCTGTACACGATAGTTCCTGGCAGGCAGCCAAGCAAAACCTTCATCAACAAAATGAAAACTGAAATGGTGAATTAAAATGAAACTATTTGCAGCCAAGTTCCATGTCTGACACTTAAGTTCTAATTAGAAACTTCGCTTACTTCTTCAATATGAGATTGAAGGGAAAGTATGTGACTGCGTCTAGACTCAATTTTAGCAGAATTTTCACTTGATTGCTGCCTGAGAGATATCAAATCTTCCAACTTCGTCATCGAACTTTTCTTTATGTCCTCTGCAAAGGAATCAAGTGAAGGCTTAATGGTTGTCTTATAGTCAACCCCCATCACATCAGCTGGTGTTGACCCCTTTGCATTCAGGAAGTACTGATGACAATTATCAAGCTTTAATCTAATAAGAACAAAAGGAAGTTGTATCAGCAAAGTAATTGTGCTGAATTGGTAAACGAAATTTCGAATTCAATAACAAAATATGTTCAGAAACTCATGCTTGTAAATATCATTTGAAATGGATAGGCTTCACAAGACGTGGGATTCACAAAAATAAATCACCAACAACTCTAAAGCTTAAGTTCATATGATAAATTTAATAACACAAATGTTCAACGGTTCCCTCGTTTGTGGGTTTGAAAATTTGTAGAAAACCCAACAAACGAAATCAATATTAATTGGAGAGGAAATGTCATTATATAGATTCGAATACAAGATCTTTTTCTCGAATACCACACAACGAACCATCCAACCAGCGAGGGGAGGATTGTAATAGAGCAGTCTCGCTAATTCTCTTTGTATGAAATTTGGAGGATTTCCCAACACACATCTCGGTTTAATCACCGATCAACACCAATCAACTCAAAAGCTTAAGCCGATGGGTTATAGTAAATTTAATCATATCAGCCCATCAACATAACTAAAGATAAAAGTACATGTTGAGGATTGTTCGAAGGGAGTCCTGCATTGACTAATTTAGGGAATGATCATGGGTTTATAAGTAAGGAATACATCACCAATGATATGTGGCCTTTTGGGGAAACCAAAAGCAAGGCCACAAGAGCTTATGCTCAAAGTAGGCAATATCATACCATTGTGGAGATCCGTGATTCCTAACAATACATTCCCTCGTAATAACAACTATATTTACCCAAACAATTCAATACAATAAAAAATTCTTGTCAGTTTGATAAGATCCTTACTAGAATGGTTTCAAAAAAACGATCTATAAGTAGTGGAAATAGATTTAAACTCGATTGAACAGGATGAAAGTATCAAGTTTGACACACCAGAAAACAAGAACTACATGATAACAACAATAAATAGAGAAAAGGGAAAGAAGGGCAACCTTCTCATAGCCTGGTTACATTCCCTTGCCATGGCCTCAAGCTCCTTAAATTTATTCCCCACTGTTGCATCAATATCCCATGTCTTCTCCTCCCACGAGTTCCTCGAGACTTCGGCATCACCAATGTCCCTCTCCACAGCCTGCAATTCTCTCCTCATCCTTTCCACATCTCTGGCATTAAACATCTGAGATTCCACCCTCATCTTCAGCTCTTCATTTTCTTCACAAATCTTCTTGTTCTCCTGCACTTTAACTTCCAACTCCTTTTCCTTTTCCTCCAATATCTTCTTCATTTCCTGCATCTTCTCACTATACCCACCAATCATTGTATGGAACTTCTTCACATCCTCTTCAAGCACAGTCTGCTGCTTCTCAAGAACCTCCCTCTGCGAGGGATCCGACCGCAACGCCTCGGCTTTGGCTTCGAGCTCCTTAACTTCCATCTCCAATCCATTCAAGCTTTCAACTGCATCATCCCTCCCTTTCTTTAACCGCTCCATAAACTCCTGATCCAAAGCTTCCACCGAATCATCATCCCCACGTATATATTGCACATAGCTATTCAGCACATATACATTCACATCGTTACTCGAAACAAACGAATCTGAATCGTTTGCAAGGTTATAGTTATAAACAGCAACCTGCACAAGCCAGTGAAGTAGGGCAAGAATTGGGTACCATTGATGAGGAGCAGGGGGAGTCTTGAGGATGCCCTTATTGATTTTGAAGGGATACCCTAGGGATTTGAGGACGATGGGGAGATCATCCTCAAGCTTCGTCGGGTGATAATCGAGACATTGAAGAAGCAAATGGATGGTTTCAGTGAGATCTTTGAGGGAAGGGGGAGAGAAGGGTTTGAATGTTAGATTGAAAGAGTGATTGAAAAGCTCCTTGAGAGACGAATTAATGGTGTTGACAGCAGAAATTTGAACGGCTCGCTCTTTGTACATGTCGATGGAGGCAGCGGCGGGACGAGCCATTCCGATGGAAGAAGGGCGGCTACTGGCAAAGCTGGCATCGGAATCGCGGCGGAATTGGGGAGTAGGTGGCGGTGGAGGATTGAAAGATCCCTTAGGATGGCGGCGGCCGTTTCCCTTCATCTAGTCTCCGGTCGATGTCTTCACAGTCTCCGGCGGGTACTTTTTCTGAAATTTCAATTTGAAAGATGGCATTCGGAAGGGGGCGGAGGGAACTTTGATTTATATCGCCACGTCATAGTCACGCACTGA

mRNA sequence

ATGATACTCAAACTCGGCCAATGCTACCATGTGCGGCCCCATGACATGCTAACAGGTACTCACTTCAGAAAGATAGTTCACTTGAGTTTCACCCTGAAAAATAGAAACCATTTACATGATCAGCAAATCATTCTGTACACGATAGTTCCTGGCAGGCAGCCAAGCAAAACCTTCATCAACAAAATGAAAACTGAAATGGGATTTGAGGACGATGGGGAGATCATCCTCAAGCTTCGTCGGGTGATAATCGAGACATTGAAGAAGCAAATGGATGGTTTCAGTGAGATCTTTGAGGGAAGGGGGAGAGAAGGAGTGATTGAAAAGCTCCTTGAGAGACGAATTAATGGTGTTGACAGCAGAAATTTGAACGGCTCGCTCTTTGTACATGTCGATGGAGGCAGCGGCGGGACGAGCCATTCCGATGGAAGAAGGGCGGCTACTGGCAAAGCTGGCATCGGAATCGCGGCGGAATTGGGGAGTAGGTGGCGGTGGAGGATTGAAAGATCCCTTAGGATGGCGGCGGCCGTTTCCCTTCATCTAGTCTCCGGTCGATGTCTTCACAGTCTCCGGCGGGTACTTTTTCTGAAATTTCAATTTGAAAGATGGCATTCGGAAGGGGGCGGAGGGAACTTTGATTTATATCGCCACGTCATAGTCACGCACTGA

Coding sequence (CDS)

ATGATACTCAAACTCGGCCAATGCTACCATGTGCGGCCCCATGACATGCTAACAGGTACTCACTTCAGAAAGATAGTTCACTTGAGTTTCACCCTGAAAAATAGAAACCATTTACATGATCAGCAAATCATTCTGTACACGATAGTTCCTGGCAGGCAGCCAAGCAAAACCTTCATCAACAAAATGAAAACTGAAATGGGATTTGAGGACGATGGGGAGATCATCCTCAAGCTTCGTCGGGTGATAATCGAGACATTGAAGAAGCAAATGGATGGTTTCAGTGAGATCTTTGAGGGAAGGGGGAGAGAAGGAGTGATTGAAAAGCTCCTTGAGAGACGAATTAATGGTGTTGACAGCAGAAATTTGAACGGCTCGCTCTTTGTACATGTCGATGGAGGCAGCGGCGGGACGAGCCATTCCGATGGAAGAAGGGCGGCTACTGGCAAAGCTGGCATCGGAATCGCGGCGGAATTGGGGAGTAGGTGGCGGTGGAGGATTGAAAGATCCCTTAGGATGGCGGCGGCCGTTTCCCTTCATCTAGTCTCCGGTCGATGTCTTCACAGTCTCCGGCGGGTACTTTTTCTGAAATTTCAATTTGAAAGATGGCATTCGGAAGGGGGCGGAGGGAACTTTGATTTATATCGCCACGTCATAGTCACGCACTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh16G003950CmoCh16G003950gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh16G003950.1CmoCh16G003950.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh16G003950.1.exon.1CmoCh16G003950.1.exon.1exon
CmoCh16G003950.1.exon.2CmoCh16G003950.1.exon.2exon
CmoCh16G003950.1.exon.3CmoCh16G003950.1.exon.3exon
CmoCh16G003950.1.exon.4CmoCh16G003950.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh16G003950.1.CDS.1CmoCh16G003950.1.CDS.1CDS
CmoCh16G003950.1.CDS.2CmoCh16G003950.1.CDS.2CDS
CmoCh16G003950.1.CDS.3CmoCh16G003950.1.CDS.3CDS
CmoCh16G003950.1.CDS.4CmoCh16G003950.1.CDS.4CDS