CmoCh16G003770.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G003770.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr16 : 1729741 .. 1733124 (+)
Sequence length3384
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTACTGATAAGCAGAAAGAAGATGGGAAACCAAAGAAGAAATGCCATCGAAGAAACTTGCAGATTGAGGAATTCCCCACATTCACCAAATGGTTAGGGCCACGCGGTCGTTCAAGTTCCCGCGACGATACCAGTTCCAAATCTTATAAGCGAGGTGTTCCCTATCCCCCTGTTAGGAGGATACCTCGAGATTCGTCGAGTGGAGGTGGTGGGGTAGTTGCCTGCGATGTTTCCAAGGAAGACGGAGGAGTGGCTATAGGTGAGTCGATATCTGCGCGAGGGGGTTGCTGCTGTTGGCAACGCTCCAAATCTACTCAGCGGGAGTGTGGACTCAACTTCCATTTCTCTCTGAGGAAGAGCAAGGTTGTTACCAATGTTTCAGAGGGTGTCGCTGCTGGCGTTTCTGATGTTCGGGAGGAGCAGGTCGTGGAAGCGGGTGCTGTTATAAATAGGGAGGGGTGTGGTTGTAGATGTTCCCCAACGTTCCACATCTGCGGGAGGAGGAAGGTACCGCCCACCGGAGTTTCATACTTGCCTGAAAAGAGGAGTGGCCGTCGAAAGTCCAGATCTATTAGACGACGAGGCTTACCGGTCGTTGACGCTCCAAATCTTCACAAAGAAGAGGGACCGGCAACGGACGGCCCTGATGTGCTCAAGGAGGAAGTGGCTACTAGTTGTCCAGATTTGGTGAAGGAAGGAGAGGCCATCGCTGCTCCAGGTCCGTGCAAGGAGGGGAGTAGATCTTGTTGTTCACAATGGAAATGTTTACCGTCGTTTCCAATGTGTGGGAGGAAACTATCTGTCGTCGAGGAAGAGGTGACTATCGAGGAAGAGGTGAGTGTGTATGATCCAAATGGGCCGGAGGTTGAAGAAGTCGCTAATGGTCCAGAATCAGTGAAGGAAGGGGAGGCCACCATTGCTCCAGCTCCGTGCAAGGAGGGGAGTGAATCCTGTTCACAATGGAAATGTTCGCCGTCGATTCCGATGTGCGAGAGGAAAGTGGCTACCGGCGAGGAAGAGTTAACTGTTGTCAATGTTCCAAATTTGCTGGACGTAGAAGTCGCTAATGGTCCAGAATTAGTGCAGGAAGGAGAGGCCACCGATGCTCCATCTCTGTGCAAGAGGAGTGGATCCTGTTGTTCACAATGGAAATGTTTGCCGGCGTTTCCAATGTGCGGGAGGAAAGTGGCTACCAGCAAGGTAGAGTTAACTGTCGTCGATATTCCAAATTTGCTGGAGGTTGAAGAAGTCGCTAATGGTCCCGAATTAGTGAAGGAAGGAGTGGCCACCGGTTCTCCAGGTCCGTACAAGAAGAGGAGTGGATCCTGTTGTTCACAATGGAAATGGATGTGCGGGAGGAAAGTGGCTACCGGCAAGGAAGGCAAGGAAGGCAAGGAAGAGTTAACTGACGTCGATGTTCCAAATTTGCTGGAGGTAGAAGAAGTCGCTAATGGTCCAGAATTAGTCAAGGAAGGAGAGGCCACCGTTGCTCCAGGTCCGTGCAAGGAGGAGAGTGGATACTGTTTTCCACAATGGAAATGTTTGCCGTCGTTTCCGACGTGCGGGAGGAAACTGTCCGTCGTTGAGGAAGAGGTGACTGTCGATGATCCAAATGTGCCGGAAGTTGCTAATCGTCCAGATTTGGCCAAGGAAGGAGAGGCCACCGTTGCTCCTGATCCACGCAAGGAGGGGAGTGGTTGCTGTTCTCCACGACTGAAAGATGTGTCGGAGTTTCAGATACGCAATTCGAAAGTGGCTGCCGGCAAACAAGAGATGACCGTTGATGTTCCAAATGTGCTGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAATAAGCAAGACGACATCTGCCCTGAGAAGCAGGAAGTGATAGGTCTGCCGGGGTTTCAGATATGCAGTTCAAAAGTGGCAGCCGGCAAACAAGAGATGACCATCGATGTTCCAAATGTGCCGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAAGAAGCAAGACATCTGCACTGAGAAGAAGGAAGTGAAAGGTTTGCCGGAGTTTCAGGTATGCAGTTCGAAAGTGGCTGCTGGCAAACAAGAAAGGACGGTCGATGTTCCAAATGTGCCGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAAGAAGCAAGACGACATCTACCCTCAGAAGAAGGAAGTGGACGGCGATCCAAATACTGGAGAGGCGGTGGCTTCCTGCAGTTCTTCTTCAAATCTTCACGAGGAGGAGGAGAAGATCAATGCCAGCGTTCCAGAATTGCACAAAAATGGGAGTGGCTGCGGTTGGTTTAAATGGATGCCGTCATTCCTGATTTGCGGAAGTAAGGTGGTTTCCGACGTTCCAAATCCAAGCAGGGAGGAGAAAGTAGTCGCTGGTGATTCAGATATACAGGAGGGAGTAGGCGCTGCGGCTGTGGCTGTGGCTGCCGCTGCCGATTCCGATGCCGATTGGGAAGCGCAATCCAAATCCGCTCGACAGGGAAGTTGTTGGCCATTCCAGTGCTGCACAATATGGTGGCCGTCCAAACTTCTGTGCACGGGGGGGATGGATGTCAATGCCTCAAATCATCAAGAGGAAGAACAAGAGGAACCTCTCAGCGATAACAAGGAGAAGGTTGTTGACGTTCTTACAGTCAAGCACAACGAGAAAGGAGCGGCTATGGGCGTTCCAGATCTTCACGAAGAGGACGGTACAGTTGCCGACAAGCAGGTGGCTGTCGTCGACATTCCGGTTCCCCGTAAGGAAGAGAAGGAGTCTGCCGGTGATACTCTAGATCTTATTCAGAAGGAAAAGAAGGCATCTTCAGGCAAGGAGGAGGAGGAAAATGTGGGCTCTGTGGTTTCAGATTCGGGCAAGGAGGAGGGTGGCTGCTGTTGTAGCTTTAAACATGGGGGAAAGGAGGATGGCTGCTCCCGCCGCGGCAGCGGCAGCGGCCGCCACCGCCGTCAGAGTTCTAATTCTAGGGAAGGATGTTGGCCATTTCAGATCTGTGGGAAAGGGTGGTTAGGGCTACCAACATTCCTCATTTGCGGTAGGAGAAAAAAGTTGTCAGATAGTATTGCATCGGCTGGTAATGGCGTTTCAGTTTCAGACATTAGTAACGTGGTGGTGGCTGTCGCCGGTACTTCCAGCGTATTGGCTGTCGCCGGTACTTCCGGCATATTGGCTACCATCAATAGTTCTAAATCTATGCCTATGCCTATGCCTGGGTGTGGTTGTTGGTACTCCAAACCACCACGGAGGCGGTCGGTATCTATTGATAAGGAGGAAGGTGACAGTCGGTGTTCCAAATCTTCTAAGCGGAGGAGAGGGGGTTCCCGACGATCAGGAAGGAAAGAAAAAGAGGGAAAGGAAAGAAAAAGATAG

mRNA sequence

ATGGCCACTACTGATAAGCAGAAAGAAGATGGGAAACCAAAGAAGAAATGCCATCGAAGAAACTTGCAGATTGAGGAATTCCCCACATTCACCAAATGGTTAGGGCCACGCGGTCGTTCAAGTTCCCGCGACGATACCAGTTCCAAATCTTATAAGCGAGGTGTTCCCTATCCCCCTGTTAGGAGGATACCTCGAGATTCGTCGAGTGGAGGTGGTGGGGTAGTTGCCTGCGATGTTTCCAAGGAAGACGGAGGAGTGGCTATAGGTGAGTCGATATCTGCGCGAGGGGGTTGCTGCTGTTGGCAACGCTCCAAATCTACTCAGCGGGAGTGTGGACTCAACTTCCATTTCTCTCTGAGGAAGAGCAAGGTTGTTACCAATGTTTCAGAGGGTGTCGCTGCTGGCGTTTCTGATGTTCGGGAGGAGCAGGTCGTGGAAGCGGGTGCTGTTATAAATAGGGAGGGGTGTGGTTGTAGATGTTCCCCAACGTTCCACATCTGCGGGAGGAGGAAGGTACCGCCCACCGGAGTTTCATACTTGCCTGAAAAGAGGAGTGGCCGTCGAAAGTCCAGATCTATTAGACGACGAGGCTTACCGGTCGTTGACGCTCCAAATCTTCACAAAGAAGAGGGACCGGCAACGGACGGCCCTGATGTGCTCAAGGAGGAAGTGGCTACTAGTTGTCCAGATTTGGTGAAGGAAGGAGAGGCCATCGCTGCTCCAGGTCCGTGCAAGGAGGGGAGTAGATCTTGTTGTTCACAATGGAAATGTTTACCGTCGTTTCCAATGTGTGGGAGGAAACTATCTGTCGTCGAGGAAGAGGTGACTATCGAGGAAGAGGTGAGTGTGTATGATCCAAATGGGCCGGAGGTTGAAGAAGTCGCTAATGGTCCAGAATCAGTGAAGGAAGGGGAGGCCACCATTGCTCCAGCTCCGTGCAAGGAGGGGAGTGAATCCTGTTCACAATGGAAATGTTCGCCGTCGATTCCGATGTGCGAGAGGAAAGTGGCTACCGGCGAGGAAGAGTTAACTGTTGTCAATGTTCCAAATTTGCTGGACGTAGAAGTCGCTAATGGTCCAGAATTAGTGCAGGAAGGAGAGGCCACCGATGCTCCATCTCTGTGCAAGAGGAGTGGATCCTGTTGTTCACAATGGAAATGTTTGCCGGCGTTTCCAATGTGCGGGAGGAAAGTGGCTACCAGCAAGGTAGAGTTAACTGTCGTCGATATTCCAAATTTGCTGGAGGTTGAAGAAGTCGCTAATGGTCCCGAATTAGTGAAGGAAGGAGTGGCCACCGGTTCTCCAGGTCCGTACAAGAAGAGGAGTGGATCCTGTTGTTCACAATGGAAATGGATGTGCGGGAGGAAAGTGGCTACCGGCAAGGAAGGCAAGGAAGGCAAGGAAGAGTTAACTGACGTCGATGTTCCAAATTTGCTGGAGGTAGAAGAAGTCGCTAATGGTCCAGAATTAGTCAAGGAAGGAGAGGCCACCGTTGCTCCAGGTCCGTGCAAGGAGGAGAGTGGATACTGTTTTCCACAATGGAAATGTTTGCCGTCGTTTCCGACGTGCGGGAGGAAACTGTCCGTCGTTGAGGAAGAGGTGACTGTCGATGATCCAAATGTGCCGGAAGTTGCTAATCGTCCAGATTTGGCCAAGGAAGGAGAGGCCACCGTTGCTCCTGATCCACGCAAGGAGGGGAGTGGTTGCTGTTCTCCACGACTGAAAGATGTGTCGGAGTTTCAGATACGCAATTCGAAAGTGGCTGCCGGCAAACAAGAGATGACCGTTGATGTTCCAAATGTGCTGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAATAAGCAAGACGACATCTGCCCTGAGAAGCAGGAAGTGATAGGTCTGCCGGGGTTTCAGATATGCAGTTCAAAAGTGGCAGCCGGCAAACAAGAGATGACCATCGATGTTCCAAATGTGCCGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAAGAAGCAAGACATCTGCACTGAGAAGAAGGAAGTGAAAGGTTTGCCGGAGTTTCAGGTATGCAGTTCGAAAGTGGCTGCTGGCAAACAAGAAAGGACGGTCGATGTTCCAAATGTGCCGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAAGAAGCAAGACGACATCTACCCTCAGAAGAAGGAAGTGGACGGCGATCCAAATACTGGAGAGGCGGTGGCTTCCTGCAGTTCTTCTTCAAATCTTCACGAGGAGGAGGAGAAGATCAATGCCAGCGTTCCAGAATTGCACAAAAATGGGAGTGGCTGCGGTTGGTTTAAATGGATGCCGTCATTCCTGATTTGCGGAAGTAAGGTGGTTTCCGACGTTCCAAATCCAAGCAGGGAGGAGAAAGTAGTCGCTGGTGATTCAGATATACAGGAGGGAGTAGGCGCTGCGGCTGTGGCTGTGGCTGCCGCTGCCGATTCCGATGCCGATTGGGAAGCGCAATCCAAATCCGCTCGACAGGGAAGTTGTTGGCCATTCCAGTGCTGCACAATATGGTGGCCGTCCAAACTTCTGTGCACGGGGGGGATGGATGTCAATGCCTCAAATCATCAAGAGGAAGAACAAGAGGAACCTCTCAGCGATAACAAGGAGAAGGTTGTTGACGTTCTTACAGTCAAGCACAACGAGAAAGGAGCGGCTATGGGCGTTCCAGATCTTCACGAAGAGGACGGTACAGTTGCCGACAAGCAGGTGGCTGTCGTCGACATTCCGGTTCCCCGTAAGGAAGAGAAGGAGTCTGCCGGTGATACTCTAGATCTTATTCAGAAGGAAAAGAAGGCATCTTCAGGCAAGGAGGAGGAGGAAAATGTGGGCTCTGTGGTTTCAGATTCGGGCAAGGAGGAGGGTGGCTGCTGTTGTAGCTTTAAACATGGGGGAAAGGAGGATGGCTGCTCCCGCCGCGGCAGCGGCAGCGGCCGCCACCGCCGTCAGAGTTCTAATTCTAGGGAAGGATGTTGGCCATTTCAGATCTGTGGGAAAGGGTGGTTAGGGCTACCAACATTCCTCATTTGCGGTAGGAGAAAAAAGTTGTCAGATAGTATTGCATCGGCTGGTAATGGCGTTTCAGTTTCAGACATTAGTAACGTGGTGGTGGCTGTCGCCGGTACTTCCAGCGTATTGGCTGTCGCCGGTACTTCCGGCATATTGGCTACCATCAATAGTTCTAAATCTATGCCTATGCCTATGCCTGGGTGTGGTTGTTGGTACTCCAAACCACCACGGAGGCGGTCGGTATCTATTGATAAGGAGGAAGGTGACAGTCGGTGTTCCAAATCTTCTAAGCGGAGGAGAGGGGGTTCCCGACGATCAGGAAGGAAAGAAAAAGAGGGAAAGGAAAGAAAAAGATAG

Coding sequence (CDS)

ATGGCCACTACTGATAAGCAGAAAGAAGATGGGAAACCAAAGAAGAAATGCCATCGAAGAAACTTGCAGATTGAGGAATTCCCCACATTCACCAAATGGTTAGGGCCACGCGGTCGTTCAAGTTCCCGCGACGATACCAGTTCCAAATCTTATAAGCGAGGTGTTCCCTATCCCCCTGTTAGGAGGATACCTCGAGATTCGTCGAGTGGAGGTGGTGGGGTAGTTGCCTGCGATGTTTCCAAGGAAGACGGAGGAGTGGCTATAGGTGAGTCGATATCTGCGCGAGGGGGTTGCTGCTGTTGGCAACGCTCCAAATCTACTCAGCGGGAGTGTGGACTCAACTTCCATTTCTCTCTGAGGAAGAGCAAGGTTGTTACCAATGTTTCAGAGGGTGTCGCTGCTGGCGTTTCTGATGTTCGGGAGGAGCAGGTCGTGGAAGCGGGTGCTGTTATAAATAGGGAGGGGTGTGGTTGTAGATGTTCCCCAACGTTCCACATCTGCGGGAGGAGGAAGGTACCGCCCACCGGAGTTTCATACTTGCCTGAAAAGAGGAGTGGCCGTCGAAAGTCCAGATCTATTAGACGACGAGGCTTACCGGTCGTTGACGCTCCAAATCTTCACAAAGAAGAGGGACCGGCAACGGACGGCCCTGATGTGCTCAAGGAGGAAGTGGCTACTAGTTGTCCAGATTTGGTGAAGGAAGGAGAGGCCATCGCTGCTCCAGGTCCGTGCAAGGAGGGGAGTAGATCTTGTTGTTCACAATGGAAATGTTTACCGTCGTTTCCAATGTGTGGGAGGAAACTATCTGTCGTCGAGGAAGAGGTGACTATCGAGGAAGAGGTGAGTGTGTATGATCCAAATGGGCCGGAGGTTGAAGAAGTCGCTAATGGTCCAGAATCAGTGAAGGAAGGGGAGGCCACCATTGCTCCAGCTCCGTGCAAGGAGGGGAGTGAATCCTGTTCACAATGGAAATGTTCGCCGTCGATTCCGATGTGCGAGAGGAAAGTGGCTACCGGCGAGGAAGAGTTAACTGTTGTCAATGTTCCAAATTTGCTGGACGTAGAAGTCGCTAATGGTCCAGAATTAGTGCAGGAAGGAGAGGCCACCGATGCTCCATCTCTGTGCAAGAGGAGTGGATCCTGTTGTTCACAATGGAAATGTTTGCCGGCGTTTCCAATGTGCGGGAGGAAAGTGGCTACCAGCAAGGTAGAGTTAACTGTCGTCGATATTCCAAATTTGCTGGAGGTTGAAGAAGTCGCTAATGGTCCCGAATTAGTGAAGGAAGGAGTGGCCACCGGTTCTCCAGGTCCGTACAAGAAGAGGAGTGGATCCTGTTGTTCACAATGGAAATGGATGTGCGGGAGGAAAGTGGCTACCGGCAAGGAAGGCAAGGAAGGCAAGGAAGAGTTAACTGACGTCGATGTTCCAAATTTGCTGGAGGTAGAAGAAGTCGCTAATGGTCCAGAATTAGTCAAGGAAGGAGAGGCCACCGTTGCTCCAGGTCCGTGCAAGGAGGAGAGTGGATACTGTTTTCCACAATGGAAATGTTTGCCGTCGTTTCCGACGTGCGGGAGGAAACTGTCCGTCGTTGAGGAAGAGGTGACTGTCGATGATCCAAATGTGCCGGAAGTTGCTAATCGTCCAGATTTGGCCAAGGAAGGAGAGGCCACCGTTGCTCCTGATCCACGCAAGGAGGGGAGTGGTTGCTGTTCTCCACGACTGAAAGATGTGTCGGAGTTTCAGATACGCAATTCGAAAGTGGCTGCCGGCAAACAAGAGATGACCGTTGATGTTCCAAATGTGCTGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAATAAGCAAGACGACATCTGCCCTGAGAAGCAGGAAGTGATAGGTCTGCCGGGGTTTCAGATATGCAGTTCAAAAGTGGCAGCCGGCAAACAAGAGATGACCATCGATGTTCCAAATGTGCCGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAAGAAGCAAGACATCTGCACTGAGAAGAAGGAAGTGAAAGGTTTGCCGGAGTTTCAGGTATGCAGTTCGAAAGTGGCTGCTGGCAAACAAGAAAGGACGGTCGATGTTCCAAATGTGCCGGAGGTAGAAGAAGTCGCTAATGATGTTGTAAAGAAGCAAGACGACATCTACCCTCAGAAGAAGGAAGTGGACGGCGATCCAAATACTGGAGAGGCGGTGGCTTCCTGCAGTTCTTCTTCAAATCTTCACGAGGAGGAGGAGAAGATCAATGCCAGCGTTCCAGAATTGCACAAAAATGGGAGTGGCTGCGGTTGGTTTAAATGGATGCCGTCATTCCTGATTTGCGGAAGTAAGGTGGTTTCCGACGTTCCAAATCCAAGCAGGGAGGAGAAAGTAGTCGCTGGTGATTCAGATATACAGGAGGGAGTAGGCGCTGCGGCTGTGGCTGTGGCTGCCGCTGCCGATTCCGATGCCGATTGGGAAGCGCAATCCAAATCCGCTCGACAGGGAAGTTGTTGGCCATTCCAGTGCTGCACAATATGGTGGCCGTCCAAACTTCTGTGCACGGGGGGGATGGATGTCAATGCCTCAAATCATCAAGAGGAAGAACAAGAGGAACCTCTCAGCGATAACAAGGAGAAGGTTGTTGACGTTCTTACAGTCAAGCACAACGAGAAAGGAGCGGCTATGGGCGTTCCAGATCTTCACGAAGAGGACGGTACAGTTGCCGACAAGCAGGTGGCTGTCGTCGACATTCCGGTTCCCCGTAAGGAAGAGAAGGAGTCTGCCGGTGATACTCTAGATCTTATTCAGAAGGAAAAGAAGGCATCTTCAGGCAAGGAGGAGGAGGAAAATGTGGGCTCTGTGGTTTCAGATTCGGGCAAGGAGGAGGGTGGCTGCTGTTGTAGCTTTAAACATGGGGGAAAGGAGGATGGCTGCTCCCGCCGCGGCAGCGGCAGCGGCCGCCACCGCCGTCAGAGTTCTAATTCTAGGGAAGGATGTTGGCCATTTCAGATCTGTGGGAAAGGGTGGTTAGGGCTACCAACATTCCTCATTTGCGGTAGGAGAAAAAAGTTGTCAGATAGTATTGCATCGGCTGGTAATGGCGTTTCAGTTTCAGACATTAGTAACGTGGTGGTGGCTGTCGCCGGTACTTCCAGCGTATTGGCTGTCGCCGGTACTTCCGGCATATTGGCTACCATCAATAGTTCTAAATCTATGCCTATGCCTATGCCTGGGTGTGGTTGTTGGTACTCCAAACCACCACGGAGGCGGTCGGTATCTATTGATAAGGAGGAAGGTGACAGTCGGTGTTCCAAATCTTCTAAGCGGAGGAGAGGGGGTTCCCGACGATCAGGAAGGAAAGAAAAAGAGGGAAAGGAAAGAAAAAGATAG
Homology
[Close]
BLAST of CmoCh16G003770.1 vs. TrEMBL
Match: A0A0A0L996_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G204780 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.2e-51
Identity = 209/657 (31.81%), Postives = 291/657 (44.29%), Query Frame = 1 

Query: 4   TDKQKEDGKPKKKCHRRNLQIEEFPTFTKWLGPRGRSSSRDDTSSKSYKRGVPYPPVRRI 63
           T+K KE+ + +K  HRRN Q+EEFPTFTKWL   G S S +D  SKS +      P++R 
Sbjct: 3   TNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQRP 62

Query: 64  P--RDSSSGGGGVVACDVSKEDG--GVAIGESISARG--GCCCWQRSKSTQRECGLNFHF 123
           P    +SS     V  +V +E+G   +A+  SISARG  GCCCWQ SKST+REC L FH 
Sbjct: 63  PVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKFHI 122

Query: 124 SLRKSKVVTNVSEG-VAAGVSDVREEQVVEAGAVINREGCGCRCSPTFHICGRRKVPPTG 183
           SLRK KVV N +E  V A V +  EE  VE      ++GCGCRC  TF I  RRK    G
Sbjct: 123 SLRKRKVVANSTEAEVVAAVLNPPEEATVED----VKDGCGCRCLRTFKIFRRRKSRVVG 182

Query: 184 VSYLPEKRSGRRKSRSIRRRGLPVVDAPNLHKEEGPATDGPDVLKEEVATSCPDLVKEGE 243
           VS                          +L KEEG  TDG ++  EEVA+S  D++KE E
Sbjct: 183 VS--------------------------DLQKEEGAVTDGVNLRTEEVASSGSDMMKEEE 242

Query: 244 AIAAPGPCK-EGSRSCCSQWKCLPSFPMCGRKLSVVEEEVTIEEEVSVYDPNGPEVEEVA 303
            + AP   K E S  CC +WKC P+F +C R+  V  +E  +           P+VEEV 
Sbjct: 243 VVIAPDRRKEEESGCCCGRWKCSPTFQICRRRKVVAGKEEVV--------GGAPKVEEVG 302

Query: 304 NGPESVKEGEATIAPAPCKEGSESCSQWKCSPSIPMCERKVATGEEELTVVNVPNLLDVE 363
           N   + +E ++      C +    C   K     P       T E+E  V N  + LDV+
Sbjct: 303 NDNVTKQEEDS----VGCLQAFHICGGRKRVDDNP------KTSEKEPLVSNDSSNLDVQ 362

Query: 364 VANGPELVQEGEATDAPSLCKRSGSCCSQWKCLPAFPMCGRKVAT--------SKVELTV 423
                            +L K    CCS ++C+P F +CG + +          + E  +
Sbjct: 363 -----------------NLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVI 422

Query: 424 VDIPNLLEVEEVANGPELVKEGVATGSPGPYKKRSGSCCSQW---KWMCGRKVATGKEGK 483
           VD+ +  E+  V +G E     V          + G+C S W     +CG          
Sbjct: 423 VDVSDPPEMGSVVDGRERHSRPV----------QGGTCWSGWFPRFLLCG---------- 482

Query: 484 EGKEELTDVDVPNLLEVEEVANGPELVKEGEATVAPGPCKEESGYCFPQWKCLPSFPTCG 543
               E T VD PN  E EE A   +  KE +  VA     E S +   +       P   
Sbjct: 483 ----EGTAVDAPNHREEEEKAPS-DARKEEKVVVATAVGDEISDHDKEKPVAAIDIPVVN 542

Query: 544 RKLSVVEEEVTVD---DPNVPEVANRPDLAKEGEATVAPDPRKEGSGCCSPRLKDVSEFQ 603
            +   V    T+D   + NV    N  D+ K  E  V  D + EG GC     +  S  Q
Sbjct: 543 EEEVFVGAGDTLDLHKEKNVSS-CNIQDVRK--EEIVDSDEKVEGGGCGCWGKESGSRQQ 566

Query: 604 IRNSK--------------------VAAGKQEMTVDVPNVLEVEEVANDVVNKQDDI 619
            R+S+                    +  G+++++V +  ++E   V NDV +   ++
Sbjct: 603 HRSSRSMEGCWSFQICGRGCLPTLNICRGRKDVSVRISKLVEEGLVDNDVSDVHKEV 566

[Close]
BLAST of CmoCh16G003770.1 vs. NCBI nr
Match: gi|700202391|gb|KGN57524.1| (hypothetical protein Csa_3G204780 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 4.6e-51
Identity = 209/657 (31.81%), Postives = 291/657 (44.29%), Query Frame = 1 

Query: 4   TDKQKEDGKPKKKCHRRNLQIEEFPTFTKWLGPRGRSSSRDDTSSKSYKRGVPYPPVRRI 63
           T+K KE+ + +K  HRRN Q+EEFPTFTKWL   G S S +D  SKS +      P++R 
Sbjct: 3   TNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQRP 62

Query: 64  P--RDSSSGGGGVVACDVSKEDG--GVAIGESISARG--GCCCWQRSKSTQRECGLNFHF 123
           P    +SS     V  +V +E+G   +A+  SISARG  GCCCWQ SKST+REC L FH 
Sbjct: 63  PVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKFHI 122

Query: 124 SLRKSKVVTNVSEG-VAAGVSDVREEQVVEAGAVINREGCGCRCSPTFHICGRRKVPPTG 183
           SLRK KVV N +E  V A V +  EE  VE      ++GCGCRC  TF I  RRK    G
Sbjct: 123 SLRKRKVVANSTEAEVVAAVLNPPEEATVED----VKDGCGCRCLRTFKIFRRRKSRVVG 182

Query: 184 VSYLPEKRSGRRKSRSIRRRGLPVVDAPNLHKEEGPATDGPDVLKEEVATSCPDLVKEGE 243
           VS                          +L KEEG  TDG ++  EEVA+S  D++KE E
Sbjct: 183 VS--------------------------DLQKEEGAVTDGVNLRTEEVASSGSDMMKEEE 242

Query: 244 AIAAPGPCK-EGSRSCCSQWKCLPSFPMCGRKLSVVEEEVTIEEEVSVYDPNGPEVEEVA 303
            + AP   K E S  CC +WKC P+F +C R+  V  +E  +           P+VEEV 
Sbjct: 243 VVIAPDRRKEEESGCCCGRWKCSPTFQICRRRKVVAGKEEVV--------GGAPKVEEVG 302

Query: 304 NGPESVKEGEATIAPAPCKEGSESCSQWKCSPSIPMCERKVATGEEELTVVNVPNLLDVE 363
           N   + +E ++      C +    C   K     P       T E+E  V N  + LDV+
Sbjct: 303 NDNVTKQEEDS----VGCLQAFHICGGRKRVDDNP------KTSEKEPLVSNDSSNLDVQ 362

Query: 364 VANGPELVQEGEATDAPSLCKRSGSCCSQWKCLPAFPMCGRKVAT--------SKVELTV 423
                            +L K    CCS ++C+P F +CG + +          + E  +
Sbjct: 363 -----------------NLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVI 422

Query: 424 VDIPNLLEVEEVANGPELVKEGVATGSPGPYKKRSGSCCSQW---KWMCGRKVATGKEGK 483
           VD+ +  E+  V +G E     V          + G+C S W     +CG          
Sbjct: 423 VDVSDPPEMGSVVDGRERHSRPV----------QGGTCWSGWFPRFLLCG---------- 482

Query: 484 EGKEELTDVDVPNLLEVEEVANGPELVKEGEATVAPGPCKEESGYCFPQWKCLPSFPTCG 543
               E T VD PN  E EE A   +  KE +  VA     E S +   +       P   
Sbjct: 483 ----EGTAVDAPNHREEEEKAPS-DARKEEKVVVATAVGDEISDHDKEKPVAAIDIPVVN 542

Query: 544 RKLSVVEEEVTVD---DPNVPEVANRPDLAKEGEATVAPDPRKEGSGCCSPRLKDVSEFQ 603
            +   V    T+D   + NV    N  D+ K  E  V  D + EG GC     +  S  Q
Sbjct: 543 EEEVFVGAGDTLDLHKEKNVSS-CNIQDVRK--EEIVDSDEKVEGGGCGCWGKESGSRQQ 566

Query: 604 IRNSK--------------------VAAGKQEMTVDVPNVLEVEEVANDVVNKQDDI 619
            R+S+                    +  G+++++V +  ++E   V NDV +   ++
Sbjct: 603 HRSSRSMEGCWSFQICGRGCLPTLNICRGRKDVSVRISKLVEEGLVDNDVSDVHKEV 566

The following BLAST results are available for this feature:
BLAST of CmoCh16G003770.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh16G003770.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L996_CUCSA3.2e-5131.81Uncharacterized protein OS=Cucumis sativus GN=Csa_3G204780 PE=4 SV=1[more]
BLAST of CmoCh16G003770.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh16G003770.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202391|gb|KGN57524.1|4.6e-5131.81hypothetical protein Csa_3G204780 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh16G003770CmoCh16G003770gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh16G003770.1CmoCh16G003770.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh16G003770.1.exon.1CmoCh16G003770.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh16G003770.1.CDS.1CmoCh16G003770.1.CDS.1CDS