CmoCh15G015120.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGGCGCCAATCTCATCGGTCATTTCGTCCTCCTTCTTCGGATCTAAACCTCTCTCCTCTGTTCTTCTTCTTCTTCTTGCTTCAATTCCTTCCGCTCCCACTGCGATTCTGATCTCTCTCTCTCAGGTGAATTCTTCTCCTTTCTACTGCTACATTTTGAATTTCTGCTCTCATTTTTCTTCTCTTCCATGCTCCCTTCGCTTTTCTTTTTGTTTCTTACAACCTCTTCATATTTGTTTTCCTCGACTTGTCTCGTCTCCTCCTCATCTGACTCAATCCATTGCTTTTCCAGGTTTTCTTATTGCTAAATTGTTAATGTCTTTTGTATCGTTTCTTGCGGATGTTTTGTTAGTTTGGTAGACTTTTCGGCACTAGTATTATTCGCCGGAAAATATATTGATCACCACAGGATGATATTTGATTTTGAAACTATTGTTCTCAGTCTCTACAATTTTGGTTCATATTGTTGAGGCAAACGGTGCATTTTTCTTTTGCAATACATATTTTGTTTACGTTACCATCCAATTGCATCTTTGAATTTTTAGAACAGAATAAATCTGAGAATTGTTCTAAATCTGCGCATTTGTGATTTGCAATGAAGTTATGGCGTCTTCATATAGACCTGAGATCGTAGAAAGGGGTGATAAAGACAAAGACAAGAAGGAAGGTGAAAATGAAGAGAAGGGTGGATTCCTTAACAAAGTGAAAGGTTTTATGCATGACGTTGGCGAGAAGATTGAAGAAAAGATGAGTTTCGGGAAGCCGACTGCCGATGTCACTGGAATTCATATTATCTCGATCAATCTTGAGAAGGCTGAGATTGTCGTTGATGTTCTGGTTAAAAACCCTAATCCTGTTCCCATTCCTCTAATTGACATTAACTATTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGTCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTCTCAAAATTCCTCTGAAGTTGGTTTATGATGATATAAAGAACACATATAATGACATTAAACCTGGCAGTATCATTCCTTACAGGGTCAAGGTTGATCTAATTGTGGATGTGCCTGTTTTTGGGAGACTGACATTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGACGTCAGTATTGAGAAGATACATTTCCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTGAAATTGGAAAATAAGAATGACTTTGAGTTGGGATTGAAGGACCTCGACTGTGAAGTTTGGCTCTCTGATATTAGTATTGGACGCTCGGATCTCTCCAAATTTACACCCATTGATAAAAATGGGATCAGCTACGTCGACTTACCAATCACTTTCAGGCCTAAGGACTTCAGTTCGGCACTTTGGGAAATGATTAGAGGAAGAGGCACTGGCTACACCATAAAAGGGAATATTCGTGTCAACACACCTTTCGGTGAGATGAAGTTGCCCATCATTAAAGTGGGCGGTACCACTCGCCTCAAGAAGAATAGGGAGGATGGTGGTGAAGAGGATGAGAACTAGGTATGCGACATCTCCTTCTCTGTTATTACTACTGGTATGCGCAACTTGATTCAAAATAGAAATTCTTGGAACTTCACACTGCTCATTGAGAAAGCATATAAAATCTGAAATCACGACAGTTACTGGATGGACAAGTTCATCCATTCATATTCTTATACAAATAAGTTAGTTAATTAGAGGGACCTGCCTCCTTTCCTAGTTTGTTCAGCTTCGAATCAAAGGAGGTCATTCTTCCATAAGGTGTATAGGCTATATTAGAACTAACTCCTGATAGCTGATAGGGACGTCGATCAGAGGAAGTGAAAAAAGTTAGAGGGTCAATATGTTAGTTACTTGAAGGGTTCAGATACTGTGACTGTTAGGGATGAGCAAGACTAAAATTTTTTAGAGGCTAGAACGATGTACCGGATAGTTTACACGTTCGAAAATGTATTGTGAACCAGCATCTAACTTTTATTATGGGGTAGTCCACATTTTTCGAGCGAGAATGTACATATAACAGCCATGAGGATCTAAGTGAGGGCTTTTGTTAGTATTGACTAGTGAAAGTAGAGGTTATGAATGAATCAAGGTGAATTCTTCTGCATAATGTTTGTTTCTTTGTCTGTGGAGACGTTTATACTTGTCTGATATAGAGGTAATTGATTTTGCGGGTGCAGGAGTAAATAAAAGAGTACCATCTGGAGGAAGAGTGGGCGTTTTTTTTTTTTTTTTCTTATAAAAAGAAGTATGATGCCCTTCCATAGATATGCCAAGGGGTTGTTGACTGAACTCTTTTGTCACTTAATTGTCATGGTCTCTATGTAAGAGGGGTTTCCTTTTGTTTTAACTACTTAGTTTTGGCACTAACTTTGGATGGTG CTTGGCGCCAATCTCATCGGTCATTTCGTCCTCCTTCTTCGGATCTAAACCTCTCTCCTCTGTTCTTCTTCTTCTTCTTGCTTCAATTCCTTCCGCTCCCACTGCGATTCTGATCTCTCTCTCTCAGATGGCGTCTTCATATAGACCTGAGATCGTAGAAAGGGGTGATAAAGACAAAGACAAGAAGGAAGGTGAAAATGAAGAGAAGGGTGGATTCCTTAACAAAGTGAAAGGTTTTATGCATGACGTTGGCGAGAAGATTGAAGAAAAGATGAGTTTCGGGAAGCCGACTGCCGATGTCACTGGAATTCATATTATCTCGATCAATCTTGAGAAGGCTGAGATTGTCGTTGATGTTCTGGTTAAAAACCCTAATCCTGTTCCCATTCCTCTAATTGACATTAACTATTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGTCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTCTCAAAATTCCTCTGAAGTTGGTTTATGATGATATAAAGAACACATATAATGACATTAAACCTGGCAGTATCATTCCTTACAGGGTCAAGGTTGATCTAATTGTGGATGTGCCTGTTTTTGGGAGACTGACATTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGACGTCAGTATTGAGAAGATACATTTCCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTGAAATTGGAAAATAAGAATGACTTTGAGTTGGGATTGAAGGACCTCGACTGTGAAGTTTGGCTCTCTGATATTAGTATTGGACGCTCGGATCTCTCCAAATTTACACCCATTGATAAAAATGGGATCAGCTACGTCGACTTACCAATCACTTTCAGGCCTAAGGACTTCAGTTCGGCACTTTGGGAAATGATTAGAGGAAGAGGCACTGGCTACACCATAAAAGGGAATATTCGTGTCAACACACCTTTCGGTGAGATGAAGTTGCCCATCATTAAAGTGGGCGGTACCACTCGCCTCAAGAAGAATAGGGAGGATGGTGGTGAAGAGGATGAGAACTAGGAGTAAATAAAAGAGTACCATCTGGAGGAAGAGTGGGCGTTTTTTTTTTTTTTTTCTTATAAAAAGAAGTATGATGCCCTTCCATAGATATGCCAAGGGGTTGTTGACTGAACTCTTTTGTCACTTAATTGTCATGGTCTCTATGTAAGAGGGGTTTCCTTTTGTTTTAACTACTTAGTTTTGGCACTAACTTTGGATGGTG ATGGCGTCTTCATATAGACCTGAGATCGTAGAAAGGGGTGATAAAGACAAAGACAAGAAGGAAGGTGAAAATGAAGAGAAGGGTGGATTCCTTAACAAAGTGAAAGGTTTTATGCATGACGTTGGCGAGAAGATTGAAGAAAAGATGAGTTTCGGGAAGCCGACTGCCGATGTCACTGGAATTCATATTATCTCGATCAATCTTGAGAAGGCTGAGATTGTCGTTGATGTTCTGGTTAAAAACCCTAATCCTGTTCCCATTCCTCTAATTGACATTAACTATTTGATAGAGAGTGATGGCAGGAAACTGATCTCTGGTCTGATTCCTGATGCTGGAACAATTCATGCTCATGGAGAGGAGACTCTCAAAATTCCTCTGAAGTTGGTTTATGATGATATAAAGAACACATATAATGACATTAAACCTGGCAGTATCATTCCTTACAGGGTCAAGGTTGATCTAATTGTGGATGTGCCTGTTTTTGGGAGACTGACATTGCCACTTGAGAAAACTGGAGAGATCCCTATTCCTTACAAGCCCGACGTCAGTATTGAGAAGATACATTTCCAGAGATTTTCATTTGAAGAAACTGTTGCCATTCTCCATTTGAAATTGGAAAATAAGAATGACTTTGAGTTGGGATTGAAGGACCTCGACTGTGAAGTTTGGCTCTCTGATATTAGTATTGGACGCTCGGATCTCTCCAAATTTACACCCATTGATAAAAATGGGATCAGCTACGTCGACTTACCAATCACTTTCAGGCCTAAGGACTTCAGTTCGGCACTTTGGGAAATGATTAGAGGAAGAGGCACTGGCTACACCATAAAAGGGAATATTCGTGTCAACACACCTTTCGGTGAGATGAAGTTGCCCATCATTAAAGTGGGCGGTACCACTCGCCTCAAGAAGAATAGGGAGGATGGTGGTGAAGAGGATGAGAACTAG
BLAST of CmoCh15G015120.1 vs. Swiss-Prot
Match: LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.2e-18 Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. Swiss-Prot
Match: LEA14_GOSHI (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum GN=LEA14-A PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16 Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. Swiss-Prot
Match: LEA14_ARATH (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana GN=LEA14 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.9e-15 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. Swiss-Prot
Match: DRPD_CRAPL (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 44/152 (28.95%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. Swiss-Prot
Match: LEA2R_ARATH (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana GN=At2g46140 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TrEMBL
Match: A0A0A0LID3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G151040 PE=4 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 1.3e-156 Identity = 269/314 (85.67%), Postives = 299/314 (95.22%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TrEMBL
Match: A0A067KCH2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19252 PE=4 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 4.5e-144 Identity = 251/317 (79.18%), Postives = 291/317 (91.80%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TrEMBL
Match: B9T526_RICCO (Late embryogenesis abundant protein Lea14-A, putative OS=Ricinus communis GN=RCOM_0211380 PE=4 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 3.8e-143 Identity = 244/314 (77.71%), Postives = 287/314 (91.40%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TrEMBL
Match: A0A068VED3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00002111001 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 2.5e-142 Identity = 246/316 (77.85%), Postives = 285/316 (90.19%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TrEMBL
Match: A0A0V0IGK0_SOLCH (Putative chilling-responsive protein-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 510.8 bits (1314), Expect = 1.2e-141 Identity = 245/320 (76.56%), Postives = 283/320 (88.44%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TAIR10
Match: AT2G44060.1 (AT2G44060.1 Late embryogenesis abundant protein, group 2) HSP 1 Score: 466.1 bits (1198), Expect = 1.7e-131 Identity = 223/306 (72.88%), Postives = 263/306 (85.95%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TAIR10
Match: AT1G01470.1 (AT1G01470.1 Late embryogenesis abundant protein) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. TAIR10
Match: AT2G46140.1 (AT2G46140.1 Late embryogenesis abundant protein) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. NCBI nr
Match: gi|449442405|ref|XP_004138972.1| (PREDICTED: uncharacterized protein LOC101217348 [Cucumis sativus]) HSP 1 Score: 560.5 bits (1443), Expect = 1.9e-156 Identity = 269/314 (85.67%), Postives = 299/314 (95.22%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. NCBI nr
Match: gi|659114748|ref|XP_008457211.1| (PREDICTED: uncharacterized protein LOC103496938 [Cucumis melo]) HSP 1 Score: 555.8 bits (1431), Expect = 4.7e-155 Identity = 268/314 (85.35%), Postives = 295/314 (93.95%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. NCBI nr
Match: gi|802676232|ref|XP_012081906.1| (PREDICTED: uncharacterized protein LOC105641870 [Jatropha curcas]) HSP 1 Score: 518.8 bits (1335), Expect = 6.4e-144 Identity = 251/317 (79.18%), Postives = 291/317 (91.80%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. NCBI nr
Match: gi|255585293|ref|XP_002533345.1| (PREDICTED: uncharacterized protein LOC8261701 [Ricinus communis]) HSP 1 Score: 515.8 bits (1327), Expect = 5.4e-143 Identity = 244/314 (77.71%), Postives = 287/314 (91.40%), Query Frame = 1
BLAST of CmoCh15G015120.1 vs. NCBI nr
Match: gi|661877011|emb|CDP19086.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 513.1 bits (1320), Expect = 3.5e-142 Identity = 246/316 (77.85%), Postives = 285/316 (90.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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