CmoCh15G015050.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTTCCAAGTGAAGTCCCAGAAGAAAGCTACTTTTGGACCATCCAAACCGATGACAACAACGATAATCTTCCGAACATGGCCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGACGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGGTTTTCGCCAAATCTTAAGGGACATGGAACTTGAACAACAACTCGTCGCCCAATTTTGATATATTATGTATCTATCAAACTCCTTCGCTTTCGGTTCAGTTCAGTTCGGTTTTGGAGTTGTTATGAAATAATGAATAAGAGTATGTGTTTGACGATGTGTCACGTCATAATTGGTTCTTATTCAAATTCATTATGTTTGAAATTTTAAGCTTTTCTGAATGGATAAAACAAGAGCCAATAGGCAATCATGAAGGATTTTGGTGGAAGGAGTAATAATTAATTATAACGTTGTAAAAGACAACCTAGTATGTGTTGTCGAAAGGGTGAGTGGTGTGGGAACAATTGCTTGTCAATTGTTTTTGCAAAAGAAGCCTGAGAGACTTGGACAAATGGTGGAGCTGCTGCTGATAGTGTGGCACATCATAAATGACTTTGGAAAAAGGACTATTTTACTTTATTTAGATTTCGTAACGTTTTTGTTTCTCGTGGACAGACATTAATCATCTTTGGCGGTGATCCAGCCGCACCTTCCAGTACAGCTACTTTGTTACGATTTCACTCCACTCACTAGTCCTGCCTTCAGCATCCTCTCCTTGCGGTTAAGGTAACGACTTCGGGCATGGCCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCTCGGGAACGAATTTACTGCTGTATGGCTGACCAACGATTACTAGCGATTTTGGCATCATGCAGGCGAGTTGCAGCCTACAATCTGAACTAAGGATAGGTTTCTGGAGTAGTTTCAGGTCCATGGCTCCTATTTCCAGCCTTCTCGGATCAACATTTGAGTGGTATAGTTAGATGTTTGTTTTCATTGTTTGACTTGGTCAAGGGTTTGATAGGGGTCTCTAGGTCTTTATGTCGAACAAATCTTGCCTAATTTCTCGGACTCGAGCCTCTAGCCCCGGTTTGAGAAGAAAGTTTTAAAAAACGGGGGCAGAGAGATTTCGAAAGAGAGTTTTGAAAGCAAGATTTGAGAAATTGGAAATGGTGTTATATAAGAATGTAAACAAAAAGGCAACAACGACGGCTTACTGCATATAACTATCGGGTAGGAAGAAGTTGACAACTAGTTATATCCCCCTCATACTGACCCAATATGGAATGGCAAATACCTATCTAGGATGAAAGAATATAAAAGGAGTTTGTAACGGGCATGCAACCATGGACAACACGTCTTGGACAAGCAAGACCGGGATATCCGTCATGCTGCCATTGACAACACGCCTTGGACATGCATGACTGTGACATCCTCCCCCACTCAATTGGTTGACGTCCTAGGCAACCGACTCATTACAACTCTATGTTGTAGACTGAGGTTGACTTTTAGGTCTCTTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCATAAACTACTTCACAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCACAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTCAATTAAACTACTTCACAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTTGGTTCGTTGGCTCTTGGCGTCTCCTCCGTCAAAGTTTCTCCTACATCTTTTGCTTCGGGATTTCTTCTTCAAACTAAAATCTCATGTTGA ATGCTTCTTCCAAGTGAAGTCCCAGAAGAAAGCTACTTTTGGACCATCCAAACCGATGACAACAACGATAATCTTCCGAACATGGCCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGACGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCACAATAGTCTCGTAGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTTGGTTCGTTGGCTCTTGGCGTCTCCTCCGTCAAAGTTTCTCCTACATCTTTTGCTTCGGGATTTCTTCTTCAAACTAAAATCTCATGTTGA ATGCTTCTTCCAAGTGAAGTCCCAGAAGAAAGCTACTTTTGGACCATCCAAACCGATGACAACAACGATAATCTTCCGAACATGGCCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGACGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCACAATAGTCTCGTAGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTCAATGTGTTTCCAGTTGATTTCAATGTTGTAGAGTCTCGTAAACTACTTCTTGGTTCGTTGGCTCTTGGCGTCTCCTCCGTCAAAGTTTCTCCTACATCTTTTGCTTCGGGATTTCTTCTTCAAACTAAAATCTCATGTTGA
BLAST of CmoCh15G015050.1 vs. Swiss-Prot
Match: BZIP8_ARATH (Basic leucine zipper 8 OS=Arabidopsis thaliana GN=BZIP8 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14 Identity = 46/114 (40.35%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. Swiss-Prot
Match: BZP43_ARATH (Basic leucine zipper 43 OS=Arabidopsis thaliana GN=BZIP43 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.0e-13 Identity = 43/110 (39.09%), Postives = 76/110 (69.09%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. Swiss-Prot
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana GN=BZIP2 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06 Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. Swiss-Prot
Match: BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana GN=BZIP53 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TrEMBL
Match: A0A0K9S0G6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_008030 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.4e-16 Identity = 50/77 (64.94%), Postives = 66/77 (85.71%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TrEMBL
Match: A0A061E947_THECC (Basic leucine-zipper 42 OS=Theobroma cacao GN=TCM_011390 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.3e-16 Identity = 53/115 (46.09%), Postives = 81/115 (70.43%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TrEMBL
Match: A0A0D2PWI5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G251000 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.9e-16 Identity = 53/113 (46.90%), Postives = 79/113 (69.91%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TrEMBL
Match: M5WTK9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011644mg PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.0e-16 Identity = 51/93 (54.84%), Postives = 69/93 (74.19%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TrEMBL
Match: A0A0J8C8A5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g140290 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.0e-16 Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TAIR10
Match: AT1G13600.1 (AT1G13600.1 basic leucine-zipper 58) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18 Identity = 55/128 (42.97%), Postives = 84/128 (65.62%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TAIR10
Match: AT2G04038.1 (AT2G04038.1 basic leucine-zipper 48) HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17 Identity = 54/110 (49.09%), Postives = 78/110 (70.91%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TAIR10
Match: AT1G68880.1 (AT1G68880.1 basic leucine-zipper 8) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15 Identity = 46/114 (40.35%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TAIR10
Match: AT3G30530.1 (AT3G30530.1 basic leucine-zipper 42) HSP 1 Score: 76.6 bits (187), Expect = 2.0e-14 Identity = 47/107 (43.93%), Postives = 72/107 (67.29%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. TAIR10
Match: AT5G38800.1 (AT5G38800.1 basic leucine-zipper 43) HSP 1 Score: 75.9 bits (185), Expect = 3.4e-14 Identity = 43/110 (39.09%), Postives = 76/110 (69.09%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. NCBI nr
Match: gi|659089912|ref|XP_008445746.1| (PREDICTED: ocs element-binding factor 1-like [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20 Identity = 72/123 (58.54%), Postives = 83/123 (67.48%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. NCBI nr
Match: gi|470136812|ref|XP_004304176.1| (PREDICTED: basic leucine zipper 43 [Fragaria vesca subsp. vesca]) HSP 1 Score: 94.7 bits (234), Expect = 2.0e-16 Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. NCBI nr
Match: gi|902238608|gb|KNA25250.1| (hypothetical protein SOVF_008030 [Spinacia oleracea]) HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16 Identity = 50/77 (64.94%), Postives = 66/77 (85.71%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. NCBI nr
Match: gi|1021476969|ref|XP_016173391.1| (PREDICTED: basic leucine zipper 43-like [Arachis ipaensis]) HSP 1 Score: 93.6 bits (231), Expect = 4.4e-16 Identity = 51/86 (59.30%), Postives = 70/86 (81.40%), Query Frame = 1
BLAST of CmoCh15G015050.1 vs. NCBI nr
Match: gi|720006062|ref|XP_010257863.1| (PREDICTED: basic leucine zipper 43-like [Nelumbo nucifera]) HSP 1 Score: 93.2 bits (230), Expect = 5.8e-16 Identity = 50/90 (55.56%), Postives = 69/90 (76.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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