CmoCh15G004370.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G004370.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr15 : 1973068 .. 1975391 (+)
Sequence length1548
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTTTATGCTTCTTTTATTTTGTTCCTTTTAATTTTATCGTCAATTTAGTCTAGTTCGTTAGGAATCTGGAATCCTTTGTTCTTTCACCGCTGGAGTTTGATATACGGTTCATTGTGCTGTGTCTCCCCTGATCCAATCTCAAGGCGTGGATCATCTAAACTTTTGTGGTTAAAATTTTAACACAGGAACCTCTCATATGCTGGATTTAAGATTTGGATGCTGGTTTTATGGTATTTTCACGATATAACAGTGCGCATCGCTAATTTCTTTAGTTTTCGCTTGAGATTCATTGATTATTTCGACACAATGCCTGTCATATGCTATCTCGCATACCGAATCTTTTTTAAGATCACTAATGTATTGATATCCATGCGGTGCAGAAATCGAAAGTGAATTCTAAGAAGTTAGTGAGATTTTGGTGCTGGATTGAAGTGATAAAAGATCAAGAAACTGTATTAAGCCGAGGTTTTGGAATAATGGCGGTACCAGAAAGTGAAGAGGTGCTAAACATTTTTCTTTGCTGTTCTCTGGATTTTGAAGCTCGTGCAAGTTTCTTCTTATATGGTTTTATAATTGTTGTCAGTAAATGTTCTATTGGCACTATGCAGGTTGGTTTTAAGCGCATTGGATTCTCAGTTAGTGATTCTGATGCAAATCTTCCTATCAAGAAAAGGAGATTTCCGACAGTGCATTTTTCTCCATCTCCATCTGAAGGTATATCTTCATTCCATCCAGATGGAAATTTATTGAAGATTGAGCGGCCATCTCCACCTAAAAAGGTATCTTCATTTAATCCCGATGAAAATTCGTTAGAGGTCGAACGGCCGAGTCTATCTGTGACAATAGTTTCAAGTTCTAGTGCAGACACATGTTATGGGTTGTCAAACAGGAACCAGGACTGTGCTTCTAATGAGAATAAACGAAAATCTGATACTCATTCATGCTATGTGGATATGGTCCAGAACGATATTGGGATGGAGTTGAGTTTCCGGGACCCGGTTTCGGGGGACATGAAGATAAGTCCTTGGTAACTGAAAAACACTCCGTTCATCGATCACCAGAGATCTACGGTGGGTTGAAGTTACCATCAACTGGCGTCGACTCGGATCCTCTTGGTAGTAACAAAGAGGAAGAAATTGATGTAAAAATGCCTGAAGAAAAGTGCGGCTCTTCAATTTGTCAAGTTGAAGGAGGAGCTGAAGCATCAGAGAAATTGGTTTCTTACCAGAGTGACCTGAATACGTAGGGTCTGATTGTGATGTTTCTCTTTTGCAATCAAGCAGGGAAAAATGGGATCTAAATACCTCAATGGATTCATAGGCCCTTTTAGGTTGTGAACATAAAGGCAACTCTATTAAAGCATTCATACCATCAAAAGAGCATCTTCATTTAAGAATCAATTCATCTTCTCCAAAGCCTACACTTGAAGAAGATCCTTATGTTTCTGAATATGAATCAGATGGTAACTGGAATATTGCCGAGGTTGAAGACGACGATGATGATAATAACATAGAAGAAGACTACGAAGATGGGGAGGTTCGGGAATCGATGCGAAAAGAGGTCCATGCTTGTGAGAAAAGAGAAATTGAGCCATTGGATCATGCTGATTGTGATGATAAGAAGATCAATTCTGCTGGATTGCCTGGTCATGAATGTTTCACATTAGGTCCTCTGGAACAGGAAACGAAACCCGAAAATAAGACTTTAAGAGTGAAGACAATGTTCATACTACAACTAAAAGTACATCTTGTGAGCAAGAACATGAAGATCTTTGTGTGAAAGAACTACATGCCGTAGAGAATACTATTGGTGAGGATGTAAACAGGCCTATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCGATCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCATTTGATGATTTGAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAATGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACAGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA

mRNA sequence

ATGGAGAAATCGAAAGTGAATTCTAAGAAGTTAGTGAGATTTTGGTGCTGGATTGAAGTGATAAAAGATCAAGAAACTGTATTAAGCCGAGGTTTTGGAATAATGGCGGTACCAGAAAGTGAAGAGGTTGGTTTTAAGCGCATTGGATTCTCAGTTAGTGATTCTGATGCAAATCTTCCTATCAAGAAAAGGAGATTTCCGACAGTGCATTTTTCTCCATCTCCATCTGAAGGTATATCTTCATTCCATCCAGATGGAAATTTATTGAAGATTGAGCGGCCATCTCCACCTAAAAAGGTATCTTCATTTAATCCCGATGAAAATTCGTTAGAGGTCGAACGGCCGAGTCTATCTGTGACAATAGTTTCAAGTTCTAGTGCAGACACATAACGATATTGGGATGGAGTTGAGTTTCCGGGACCCGGTTTCGGGGGACATGAAGATAAGTCCTTGGTAACTGAAAAACACTCCGTTCATCGATCACCAGAGATCTACGGTGGGTTGAAGTTACCATCAACTGGCGTCGACTCGGATCCTCTTGGTAGTAACAAAGAGGAAGAAATTGATGTAAAAATGCCTGAAGAAAAGTGCGGCTCTTCAATTTGTCAAGTTGAAGGAGGAGCTGAAGCATCAGAGAAATTGGCCCTTTTAGGTTGTGAACATAAAGGCAACTCTATTAAAGCATTCATACCATCAAAAGAGCATCTTCATTTAAGAATCAATTCATCTTCTCCAAAGCCTACACTTGAAGAAGATCCTTATGTTTCTGAATATGAATCAGATGGTAACTGGAATATTGCCGAGGTTGAAGACGACGATGATGATAATAACATAGAAGAAGACTACGAAGATGGGGAGGTTCGGGAATCGATGCGAAAAGAGGTCCATGCTTGTGAGAAAAGAGAAATTGAGCCATTGGATCATGCTGATTGTGATGATAAGAAGATCAATTCTGCTGGATTGCCTGGTCATGAATGTTTCACATTAGAACATGAAGATCTTTGTGTGAAAGAACTACATGCCGTAGAGAATACTATTGGTGAGGATGTAAACAGGCCTATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCGATCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCATTTGATGATTTGAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAATGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACAGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA

Coding sequence (CDS)

ATGCCTGAAGAAAAGTGCGGCTCTTCAATTTGTCAAGTTGAAGGAGGAGCTGAAGCATCAGAGAAATTGGCCCTTTTAGGTTGTGAACATAAAGGCAACTCTATTAAAGCATTCATACCATCAAAAGAGCATCTTCATTTAAGAATCAATTCATCTTCTCCAAAGCCTACACTTGAAGAAGATCCTTATGTTTCTGAATATGAATCAGATGGTAACTGGAATATTGCCGAGGTTGAAGACGACGATGATGATAATAACATAGAAGAAGACTACGAAGATGGGGAGGTTCGGGAATCGATGCGAAAAGAGGTCCATGCTTGTGAGAAAAGAGAAATTGAGCCATTGGATCATGCTGATTGTGATGATAAGAAGATCAATTCTGCTGGATTGCCTGGTCATGAATGTTTCACATTAGAACATGAAGATCTTTGTGTGAAAGAACTACATGCCGTAGAGAATACTATTGGTGAGGATGTAAACAGGCCTATGAAGGCTGCAGGAAGAAGCCAATTATCTCAATATGTTAATAAGGATCTTCTCCATTCTAAGCAAATCCACTTGATGATGTTCCGGGAAAGAAGGAACTTCTCATTCCAAAGAATTGATTCTAAGTCTCTAGTAAGATCCCGATCTCGCTCTCCGAGCCAATGTCTCTTTGAAAGATCTGATAGGTTTTATGGATGTCCCGACATGACACGTCGAAGATCTCCAAATTATAGGACAGACGGGACGAGATCGCCCGATCAGCATCCTATATGTGCGCATATGACAGGCCAAAGACAAGGATTCTGTTTCCTTTCACCATTTGATGATTTGAGGAATCAAACTGAAAGATTACCTCTTAGAAACAGAAGTTATGATGCTATAGATCATCAAGTAAGGATAGAGAGCAATGAGCTTTTTGATGATCCCGTACGCTCGGGTCAACTGAGCGAGTACAGTGGTGGCGAACCCGATGACAATAAAAGAAGATAA
Homology
[Close]
BLAST of CmoCh15G004370.1 vs. TrEMBL
Match: A0A0A0KNM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G503580 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 107/194 (55.15%), Postives = 125/194 (64.43%), Query Frame = 1 

Query: 22  KLALLGCEHKGNSIKAFIPSKEHLHLRINSSSPKPT---LEEDPYVSEYESDGNWNIAE- 81
           K  LL  E KGNSI   +PSKE+L L ++SS  KP    LEEDPY+SEYESDGNW+IAE 
Sbjct: 373 KQTLLDGEDKGNSIYDCMPSKENLDLSLDSSYLKPVQPVLEEDPYISEYESDGNWDIAEA 432

Query: 82  VEDDDDDNNIEEDYEDGEVRESMRK---EVHACEKREIEPLDHADCDDKKINSAGLPGHE 141
           V+DDD+DN++EEDYEDGEVRE++++   EV A EKREIEPLDHA CDDKKINS  LP HE
Sbjct: 433 VDDDDNDNHLEEDYEDGEVRETLQESEVEVLAYEKREIEPLDHAGCDDKKINSIRLPDHE 492

Query: 142 CFTL-------------------------------EHEDLCVKELHAVENTIGEDVNRPM 178
              L                               E+EDLCVKELHAVENTI  DVN+ +
Sbjct: 493 LHALGPLEQETKPENLDLRSEDDVRTTTNSKSYEQENEDLCVKELHAVENTISGDVNKAV 552

[Close]
BLAST of CmoCh15G004370.1 vs. TrEMBL
Match: A0A0A0KU39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G504130 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 96/159 (60.38%), Postives = 110/159 (69.18%), Query Frame = 1 

Query: 190 FRERRNFSFQR-----IDSKSLVRSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRTDG 249
           FRERRNFSFQR     IDSKS VRSR+RSPSQ    +RSDRF   P+MT RRSPNY TD 
Sbjct: 814 FRERRNFSFQRKTFPKIDSKSPVRSRARSPSQWFSSKRSDRFCERPNMTHRRSPNYMTDR 873

Query: 250 TRSPDQHPICAHMTGQRQGFCFLSPFDDL------------------RNQTERLPLRNRS 309
            RSPDQ  I  +M GQRQGF +LSP D+L                  RNQT+RLPLRNRS
Sbjct: 874 MRSPDQRSIRGYMPGQRQGFRYLSPPDELRDVGPAPDHGHMRPFIPNRNQTKRLPLRNRS 933

Query: 310 YDAIDHQVRIESNELFDDPVRSGQLSEYSGGEPDDNKRR 325
           YDAID + RIE++ LF  PVR GQL+ Y+GGEPDD++RR
Sbjct: 934 YDAIDPRGRIENDGLFYGPVRLGQLTGYNGGEPDDDERR 972

[Close]
BLAST of CmoCh15G004370.1 vs. TrEMBL
Match: A0A0A0KQR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G503570 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.5e-27
Identity = 77/138 (55.80%), Postives = 91/138 (65.94%), Query Frame = 1 

Query: 207 VRSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRTDGTRSPDQHPICAHMT-GQRQGFC 266
           VRSR+RSP+Q    +RSDRF    DMTRRRSPNYR +  R PDQ PI  HM   +RQGF 
Sbjct: 38  VRSRARSPNQWFSSKRSDRFCERSDMTRRRSPNYRMERMRPPDQRPIRGHMPPSRRQGFH 97

Query: 267 FLSPFDDLR------------------NQTERLPLRNRSYDAIDHQVRIESNELFDDPVR 325
           FLSP D+LR                  NQ ERLPLRNRSYDAID + +IE++E F  PVR
Sbjct: 98  FLSPADELRDVGPAPDHCHMRSIMPDRNQPERLPLRNRSYDAIDPEGKIENDEHFYGPVR 157

[Close]
BLAST of CmoCh15G004370.1 vs. TrEMBL
Match: W9S4N8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017256 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 47/139 (33.81%), Postives = 66/139 (47.48%), Query Frame = 1 

Query: 199  QRIDSKSLVRSRSRSPSQCLFER---SDRFYGCPDMTRRRSPN-YRTDGTRSPDQHPICA 258
            QRI SKS + SR+RSP      R    + F G PD+T RRSP  YR +  RSPD+     
Sbjct: 1096 QRIRSKSPLNSRTRSPGSWSSPRRRSPEGFAGHPDLTHRRSPQFYRVNRMRSPDRRCFAG 1155

Query: 259  HM----------TGQRQGFCFLSPFDDLRNQTERLPLRNRSYDAIDHQVRIESNELFDDP 318
             +          +G+  G          RN ++R+ LR+R +  +D Q R E +  F  P
Sbjct: 1156 EVVRRPDLRDMDSGRDHG--HPGSVMPNRNPSDRIVLRDRRFGGLDPQERSEGDNFFGGP 1215

Query: 319  VRSGQLSEYSGGEPDDNKR 324
            +  G+L E  G    D +R
Sbjct: 1216 MHPGRLQELGGDVSGDERR 1232

[Close]
BLAST of CmoCh15G004370.1 vs. TrEMBL
Match: V4VAV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033332mg PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.0e-06
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 1 

Query: 58  LEEDPYVSEYESDGNWNIAEVEDDDDDNNIEEDYEDGEVRESM---RKEVHACEKREIEP 117
           LEED Y S+YESDGN ++    D + D   EED+EDGEVRE +     E   CEKRE+EP
Sbjct: 597 LEEDSYGSDYESDGNLDLGTAMDTEQDGIREEDFEDGEVREPLADTTMEEPTCEKREVEP 656

Query: 118 LDHADCDDKKINSAGLPGHE 135
            +  D   ++++  GLP  +
Sbjct: 657 FNSDDSHKEQMSYVGLPSDD 676

[Close]
BLAST of CmoCh15G004370.1 vs. NCBI nr
Match: gi|778703200|ref|XP_011655334.1| (PREDICTED: uncharacterized protein LOC101204567 isoform X1 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 1.8e-40
Identity = 107/194 (55.15%), Postives = 125/194 (64.43%), Query Frame = 1 

Query: 22  KLALLGCEHKGNSIKAFIPSKEHLHLRINSSSPKPT---LEEDPYVSEYESDGNWNIAE- 81
           K  LL  E KGNSI   +PSKE+L L ++SS  KP    LEEDPY+SEYESDGNW+IAE 
Sbjct: 394 KQTLLDGEDKGNSIYDCMPSKENLDLSLDSSYLKPVQPVLEEDPYISEYESDGNWDIAEA 453

Query: 82  VEDDDDDNNIEEDYEDGEVRESMRK---EVHACEKREIEPLDHADCDDKKINSAGLPGHE 141
           V+DDD+DN++EEDYEDGEVRE++++   EV A EKREIEPLDHA CDDKKINS  LP HE
Sbjct: 454 VDDDDNDNHLEEDYEDGEVRETLQESEVEVLAYEKREIEPLDHAGCDDKKINSIRLPDHE 513

Query: 142 CFTL-------------------------------EHEDLCVKELHAVENTIGEDVNRPM 178
              L                               E+EDLCVKELHAVENTI  DVN+ +
Sbjct: 514 LHALGPLEQETKPENLDLRSEDDVRTTTNSKSYEQENEDLCVKELHAVENTISGDVNKAV 573

[Close]
BLAST of CmoCh15G004370.1 vs. NCBI nr
Match: gi|778703207|ref|XP_011655336.1| (PREDICTED: uncharacterized protein LOC101204567 isoform X2 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 1.8e-40
Identity = 107/194 (55.15%), Postives = 125/194 (64.43%), Query Frame = 1 

Query: 22  KLALLGCEHKGNSIKAFIPSKEHLHLRINSSSPKPT---LEEDPYVSEYESDGNWNIAE- 81
           K  LL  E KGNSI   +PSKE+L L ++SS  KP    LEEDPY+SEYESDGNW+IAE 
Sbjct: 373 KQTLLDGEDKGNSIYDCMPSKENLDLSLDSSYLKPVQPVLEEDPYISEYESDGNWDIAEA 432

Query: 82  VEDDDDDNNIEEDYEDGEVRESMRK---EVHACEKREIEPLDHADCDDKKINSAGLPGHE 141
           V+DDD+DN++EEDYEDGEVRE++++   EV A EKREIEPLDHA CDDKKINS  LP HE
Sbjct: 433 VDDDDNDNHLEEDYEDGEVRETLQESEVEVLAYEKREIEPLDHAGCDDKKINSIRLPDHE 492

Query: 142 CFTL-------------------------------EHEDLCVKELHAVENTIGEDVNRPM 178
              L                               E+EDLCVKELHAVENTI  DVN+ +
Sbjct: 493 LHALGPLEQETKPENLDLRSEDDVRTTTNSKSYEQENEDLCVKELHAVENTISGDVNKAV 552

[Close]
BLAST of CmoCh15G004370.1 vs. NCBI nr
Match: gi|659127163|ref|XP_008463558.1| (PREDICTED: uncharacterized protein LOC103501674 isoform X2 [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39
Identity = 105/200 (52.50%), Postives = 128/200 (64.00%), Query Frame = 1 

Query: 22  KLALLGCEHKGNSIKAFIPSKEHLHLRINSSSPKPTLEEDPYVSEYESDGNWNIAE-VED 81
           K  LL  E K NSI A +PSK HLHL ++SS  KP +EEDPY+SEYESDGNW+IAE V+D
Sbjct: 406 KQTLLDSEDKDNSIYACMPSKGHLHLSLDSSYLKPVVEEDPYISEYESDGNWDIAEAVDD 465

Query: 82  DDDDNNIEEDYEDGEVRESMRK---EVHACEKREIEPLDHADCD----------DKKINS 141
           DD+DN++EEDYEDGEVRE++++   EVHA EKREIEPLDHA CD          D ++ +
Sbjct: 466 DDNDNHLEEDYEDGEVRETLQETEVEVHAYEKREIEPLDHAGCDDKKINTIRLPDHELLA 525

Query: 142 AGLPGHEC---------------------FTLEHEDLCVKELHAVENTIGEDVNRPMKAA 187
            G    E                      +  E+EDLCVKELHAVEN+I  DVNRP+KA 
Sbjct: 526 LGPLEQETKPENLDHRSEDDVRTTTKSKSYEQENEDLCVKELHAVENSISGDVNRPVKAT 585

[Close]
BLAST of CmoCh15G004370.1 vs. NCBI nr
Match: gi|659127158|ref|XP_008463556.1| (PREDICTED: uncharacterized protein LOC103501674 isoform X1 [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 1.5e-39
Identity = 105/200 (52.50%), Postives = 128/200 (64.00%), Query Frame = 1 

Query: 22  KLALLGCEHKGNSIKAFIPSKEHLHLRINSSSPKPTLEEDPYVSEYESDGNWNIAE-VED 81
           K  LL  E K NSI A +PSK HLHL ++SS  KP +EEDPY+SEYESDGNW+IAE V+D
Sbjct: 427 KQTLLDSEDKDNSIYACMPSKGHLHLSLDSSYLKPVVEEDPYISEYESDGNWDIAEAVDD 486

Query: 82  DDDDNNIEEDYEDGEVRESMRK---EVHACEKREIEPLDHADCD----------DKKINS 141
           DD+DN++EEDYEDGEVRE++++   EVHA EKREIEPLDHA CD          D ++ +
Sbjct: 487 DDNDNHLEEDYEDGEVRETLQETEVEVHAYEKREIEPLDHAGCDDKKINTIRLPDHELLA 546

Query: 142 AGLPGHEC---------------------FTLEHEDLCVKELHAVENTIGEDVNRPMKAA 187
            G    E                      +  E+EDLCVKELHAVEN+I  DVNRP+KA 
Sbjct: 547 LGPLEQETKPENLDHRSEDDVRTTTKSKSYEQENEDLCVKELHAVENSISGDVNRPVKAT 606

[Close]
BLAST of CmoCh15G004370.1 vs. NCBI nr
Match: gi|778703228|ref|XP_011655341.1| (PREDICTED: uncharacterized protein LOC101204083 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36
Identity = 96/159 (60.38%), Postives = 110/159 (69.18%), Query Frame = 1 

Query: 190 FRERRNFSFQR-----IDSKSLVRSRSRSPSQCLF-ERSDRFYGCPDMTRRRSPNYRTDG 249
           FRERRNFSFQR     IDSKS VRSR+RSPSQ    +RSDRF   P+MT RRSPNY TD 
Sbjct: 803 FRERRNFSFQRKTFPKIDSKSPVRSRARSPSQWFSSKRSDRFCERPNMTHRRSPNYMTDR 862

Query: 250 TRSPDQHPICAHMTGQRQGFCFLSPFDDL------------------RNQTERLPLRNRS 309
            RSPDQ  I  +M GQRQGF +LSP D+L                  RNQT+RLPLRNRS
Sbjct: 863 MRSPDQRSIRGYMPGQRQGFRYLSPPDELRDVGPAPDHGHMRPFIPNRNQTKRLPLRNRS 922

Query: 310 YDAIDHQVRIESNELFDDPVRSGQLSEYSGGEPDDNKRR 325
           YDAID + RIE++ LF  PVR GQL+ Y+GGEPDD++RR
Sbjct: 923 YDAIDPRGRIENDGLFYGPVRLGQLTGYNGGEPDDDERR 961

The following BLAST results are available for this feature:
BLAST of CmoCh15G004370.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh15G004370.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNM2_CUCSA1.2e-4055.15Uncharacterized protein OS=Cucumis sativus GN=Csa_5G503580 PE=4 SV=1[more]
A0A0A0KU39_CUCSA1.1e-3660.38Uncharacterized protein OS=Cucumis sativus GN=Csa_5G504130 PE=4 SV=1[more]
A0A0A0KQR7_CUCSA3.5e-2755.80Uncharacterized protein OS=Cucumis sativus GN=Csa_5G503570 PE=4 SV=1[more]
W9S4N8_9ROSA1.2e-0633.81Uncharacterized protein OS=Morus notabilis GN=L484_017256 PE=4 SV=1[more]
V4VAV3_9ROSI2.0e-0645.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033332mg PE=4 SV=1[more]
BLAST of CmoCh15G004370.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh15G004370.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703200|ref|XP_011655334.1|1.8e-4055.15PREDICTED: uncharacterized protein LOC101204567 isoform X1 [Cucumis sativus][more]
gi|778703207|ref|XP_011655336.1|1.8e-4055.15PREDICTED: uncharacterized protein LOC101204567 isoform X2 [Cucumis sativus][more]
gi|659127163|ref|XP_008463558.1|1.5e-3952.50PREDICTED: uncharacterized protein LOC103501674 isoform X2 [Cucumis melo][more]
gi|659127158|ref|XP_008463556.1|1.5e-3952.50PREDICTED: uncharacterized protein LOC103501674 isoform X1 [Cucumis melo][more]
gi|778703228|ref|XP_011655341.1|1.6e-3660.38PREDICTED: uncharacterized protein LOC101204083 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh15G004370CmoCh15G004370gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh15G004370.1CmoCh15G004370.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh15G004370.1.exon.1CmoCh15G004370.1.exon.1exon
CmoCh15G004370.1.exon.2CmoCh15G004370.1.exon.2exon
CmoCh15G004370.1.exon.3CmoCh15G004370.1.exon.3exon
CmoCh15G004370.1.exon.4CmoCh15G004370.1.exon.4exon
CmoCh15G004370.1.exon.5CmoCh15G004370.1.exon.5exon
CmoCh15G004370.1.exon.6CmoCh15G004370.1.exon.6exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh15G004370.1.five_prime_UTR.1CmoCh15G004370.1.five_prime_UTR.1five_prime_UTR
CmoCh15G004370.1.five_prime_UTR.2CmoCh15G004370.1.five_prime_UTR.2five_prime_UTR
CmoCh15G004370.1.five_prime_UTR.3CmoCh15G004370.1.five_prime_UTR.3five_prime_UTR
CmoCh15G004370.1.five_prime_UTR.4CmoCh15G004370.1.five_prime_UTR.4five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh15G004370.1.CDS.1CmoCh15G004370.1.CDS.1CDS
CmoCh15G004370.1.CDS.2CmoCh15G004370.1.CDS.2CDS
CmoCh15G004370.1.CDS.3CmoCh15G004370.1.CDS.3CDS