CmoCh14G016850.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTACATTAATTTTTCTTTTTTCAAACTAATTCCATTCCTTTTCCCATAATGGCCTCAGCCGAGCCGGAATCTGCCAAGGAGGCACCGCCGCCTCCGCCCTCTACCGCTCCCCGAGGGAGAGTGAATTTGTCCCTGGTCGACTTCGGCCTGAGATTTGTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATGTGAGTTTTATTTATTTATTTATTTAAATATTTGAAATTATATAAACCTAATATGATATTTATCAAAAACTAAAATAATATATTAAGCATATATATATATATATATATATTAAAGTAATTTCTTGCTCGAGCTCGAAAATAAAAACTCCAAATAAATTAAAAAATAAATAAATATATATTGAGAAAAATAATTTTGAAATAAAAAAGCGACAATATAATCACTTAGAATAATATTGAGGTAATTGATTGTTTATTATATGTCATTTGGACATCTAATAATATAAATAAAGACCCTCGAGAAGTTGTATGGTGACGAAAATAGTTAGACCTCTTTATAATCCAACTCGATGAACCATATATTATAATCACAAAAATTATAAATAAAATACTAATAAAATTTAAAATTAATCTATGTATTAAAGACATATTTATATTCATGAAAATTATTATTATTATTATTGTTATTTATTTAATTTTGTTAAAAAATTAACTTAAATAACTAATATATAAGATTTTTTTTAATGTTCAACCAATATTATTTATAATTATTCAGCTTGATATTCATTAATTTATTTATTGATTTTGTCATTTTGAGTTAATTTATTTAATTAAATTGTTTTAAATGCATTTAAAAACTGAAATTAATGATACGGAATTAAAATATACAGATATTTCGTGGCTGCATTATCGTTGGCGGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGGTAATTTCTCTCTCTACTACTCACCGTTAAGTAACGGCGGTTAATTTAAATATTTTAATATCACTATTAATTATCACTCTAATTTTAAAACTAATATATTATCACTTTAATGTATAAATTTATTTGGAAATTGTGTGCAGTTGATATTGGGGGTGGTAGCCTCAGCAACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACTCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGGTGTTATTTTTTTATAAAATATTGTGTTAATTATA AATTACATTAATTTTTCTTTTTTCAAACTAATTCCATTCCTTTTCCCATAATGGCCTCAGCCGAGCCGGAATCTGCCAAGGAGGCACCGCCGCCTCCGCCCTCTACCGCTCCCCGAGGGAGAGTGAATTTGTCCCTGGTCGACTTCGGCCTGAGATTTGTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGTTGGCGGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGTTGATATTGGGGGTGGTAGCCTCAGCAACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACTCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGGTGTTATTTTTTTATAAAATATTGTGTTAATTATA ATGGCCTCAGCCGAGCCGGAATCTGCCAAGGAGGCACCGCCGCCTCCGCCCTCTACCGCTCCCCGAGGGAGAGTGAATTTGTCCCTGGTCGACTTCGGCCTGAGATTTGTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGTTGGCGGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGTTGATATTGGGGGTGGTAGCCTCAGCAACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAG
BLAST of CmoCh14G016850.1 vs. Swiss-Prot
Match: CSPL5_RICCO (CASP-like protein 1D1 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.9e-54 Identity = 114/193 (59.07%), Postives = 148/193 (76.68%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. Swiss-Prot
Match: CSPL7_VITVI (CASP-like protein 1D1 OS=Vitis vinifera GN=VIT_05s0020g01830 PE=2 SV=2) HSP 1 Score: 209.9 bits (533), Expect = 2.5e-53 Identity = 107/184 (58.15%), Postives = 140/184 (76.09%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. Swiss-Prot
Match: CSPLD_POPTR (CASP-like protein 1D1 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=2) HSP 1 Score: 205.7 bits (522), Expect = 4.7e-52 Identity = 109/197 (55.33%), Postives = 151/197 (76.65%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. Swiss-Prot
Match: CSPL7_SOYBN (CASP-like protein 1D2 OS=Glycine max PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.5e-45 Identity = 105/197 (53.30%), Postives = 137/197 (69.54%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. Swiss-Prot
Match: CSPL8_SOYBN (CASP-like protein 1D1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.2e-45 Identity = 105/197 (53.30%), Postives = 136/197 (69.04%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TrEMBL
Match: A0A0A0L552_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151480 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 2.0e-78 Identity = 161/196 (82.14%), Postives = 175/196 (89.29%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TrEMBL
Match: W9S0X6_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_008467 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.9e-53 Identity = 114/192 (59.38%), Postives = 144/192 (75.00%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TrEMBL
Match: A0A067L687_JATCU (CASP-like protein OS=Jatropha curcas GN=JCGZ_02018 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 7.3e-52 Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TrEMBL
Match: M5XMA7_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa011684mg PE=3 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 5.2e-50 Identity = 120/199 (60.30%), Postives = 145/199 (72.86%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TrEMBL
Match: A0A0B2SQZ7_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_020163 PE=3 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.2e-46 Identity = 109/196 (55.61%), Postives = 138/196 (70.41%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TAIR10
Match: AT4G15610.1 (AT4G15610.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 172.6 bits (436), Expect = 2.5e-43 Identity = 94/168 (55.95%), Postives = 123/168 (73.21%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TAIR10
Match: AT3G06390.1 (AT3G06390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 156.0 bits (393), Expect = 2.4e-38 Identity = 90/195 (46.15%), Postives = 132/195 (67.69%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 94.4 bits (233), Expect = 8.6e-20 Identity = 60/161 (37.27%), Postives = 97/161 (60.25%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TAIR10
Match: AT4G20390.1 (AT4G20390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16 Identity = 55/154 (35.71%), Postives = 86/154 (55.84%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14 Identity = 49/165 (29.70%), Postives = 90/165 (54.55%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. NCBI nr
Match: gi|659076669|ref|XP_008438804.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Cucumis melo]) HSP 1 Score: 306.6 bits (784), Expect = 3.1e-80 Identity = 167/198 (84.34%), Postives = 176/198 (88.89%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. NCBI nr
Match: gi|778678765|ref|XP_011651032.1| (PREDICTED: CASP-like protein 1D1 [Cucumis sativus]) HSP 1 Score: 300.1 bits (767), Expect = 2.9e-78 Identity = 161/196 (82.14%), Postives = 175/196 (89.29%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. NCBI nr
Match: gi|703132022|ref|XP_010105026.1| (hypothetical protein L484_008467 [Morus notabilis]) HSP 1 Score: 216.1 bits (549), Expect = 5.5e-53 Identity = 114/192 (59.38%), Postives = 144/192 (75.00%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. NCBI nr
Match: gi|255551653|ref|XP_002516872.1| (PREDICTED: CASP-like protein 1D1 [Ricinus communis]) HSP 1 Score: 213.0 bits (541), Expect = 4.7e-52 Identity = 114/193 (59.07%), Postives = 148/193 (76.68%), Query Frame = 1
BLAST of CmoCh14G016850.1 vs. NCBI nr
Match: gi|802578186|ref|XP_012069400.1| (PREDICTED: CASP-like protein 1D1 [Jatropha curcas]) HSP 1 Score: 211.8 bits (538), Expect = 1.0e-51 Identity = 109/188 (57.98%), Postives = 143/188 (76.06%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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