CmoCh14G014070.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATTAATTTTATTACTTTCAGAATAATTTCTGAACATGTCCTGAAATCAAACAAAAACAGCCGAATTCGGAGTTCTCCGCCCCAGATCGGCCACTACTCGGATCCTTTTACCATTTCTGATCACTTTCTGTTTGGGTTCGTGGAAAATTTTCTGATCAATCTACGAATAACTCCACAGAATTCAATTACTTCGTTCTCTGAAGTTTGACGAGTTTCTGATCCTCGGTGATTTCTACAGTTGTTTTGATTTCGCCTCTTTCTGTAGCAAATTCTAGGCAATCTTCCTCCGTACAAATTGCCTACATTTTGCTACTTCTTCCTCGAGGTGAGAACGTAGATTTTGATTTGCGTTCATTGAATCTCAGCGACGAACAATGGGAAATTCCTCCTCGATGCTCACTCAATATGATATTGAAGAAGTTCAACAGCACTGCGATAATCTGTGTGAGTGTTTTCGATTTCTGTTCTTTATTCTTTCTTTGGATACTCTACGCTTCTAATTTTCTCGGTTCTCGTTCATTTTGGGTCTGCAATTCAGTTACGCAACAAGAAATAGTGTCACTGTATCAGAGATTTTGTCAACTCGATCGAAACTCGAAGGGATACATCTTGTCCGACGAGTTCTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGGTTATTTGAACGATTTCTATGATTAATTTCTTGATGTAGTTAGATTCTGAGCCTGAGTTTGCGAAGTTCGTGTACTTCAATTGGTGAATGATAGTTTATCCTTTTCTTTTGGTATTCCCCAGAGGTTGCTGAAGATGGTTGATGGTTTGAACTTCAAAGATTTCGTGGCATTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACGTAAAATTGAATGTACGTATAAAATGCAGTCTTCCAATTGTTTAGATCCTGTCTGATGACACTCGACATTGGCTTGTTTGATAGTGTTCTCTTGTAATTCAAAAGTCGTGTTCAAAGTTTGGAGCAGAATTTTGGTTTATATTTCCAACTTTCCATACTTGATTGTACACCCTTTATCACATGATTTAGACATTCTAATATTTAAACAGATTGTTTAAGATCATTTTTTCCCCTTTTGCACTTCTGTCAAAACAATGCTCGTATGCTTATGTTTTCGATTCGATGGTGTTAGGAATTGTGAAATAACTATCCAATTTGATTGTAGTGTTCTTCCAGAAGTATGAAACAGTGAGAAAAAGTTGTCAAATGGGATTCTATTGAGGAGTTTTCAAATTCAACGTATTGTAATTGGCTCAATAGGGCCTAGGTAGATAGAGTAACGTAGTGAATTTGGTTGTTATTTTAGTTAGTTGATGTATGGGTTTTGATCCTAAAAGTTATGTGCATGATTTTGAGTAGCCATTTTGATATTTTCTTGGATAGTGTAAGAGTATTGGGTCAAAATGTATATCTTCGAACTTTTTGATCAATTAGGTGCGGGAAGGTATTTCACCACGTTGGACTATAAACTTCTCTCTTAAATAGCATTCTTTCTTTCTAGTGGAGGGGGGCCGCCTTTAGTAGTTATATCTCCTTCAGGGCACTCTTTTCATTGTTTTTTTCTTTTCTTGTTCTTGATTACAGCCACTAACATTATACTCGTTTAACGTATTACAAATTTGAGTGGCTAAAATCTTTTCTTTATAATTTGTTCTCGTTTCACTAGTTATGTTCAAAGTGTACGATGTGGACTTTAATGGGAAGGTGTCTTTCAATGACATAATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGGTACTCAAGACGCTGCACTAAATCTTAGGAGGCACTCACTGGGAGATTTGTATATATTTTCCATAGCTCATGATATGGCATGTTCTAAAGTTTTGCCCTTTTATCTCTTTTGTAGCAAGTCTTGAGCCAACTTCTGGAGGAAGCAGGTTACTCAAAGGAATCCCAGTTAACCCAGGAGGATTTCGTTATGGTTTGTTCTTACTATCATAAATCTCACTGTTTTTCATTTGGACCAACGAGGCATAGTGACATGCTTATCTGACACTATACAAACACAAAAATAATTGATACTTATTTGAAACTTGGATTAATCAAATTGAAAAAATGTACATAAATCGCCTAAAATTAACCAAATATCACCACAAAGATGAAGTAGCTGAAATGTCAAGGAAATACATGAATAGTAATTAACATTCACAATCATATTTGAAGTCTTATTATCAATAACAGTACCTCGTTGCTGAAGTTTAGTCATTTCAAATCTAAACTTGCTGATTCTTCAGCATCTGAACAAACACGTTCCACCTAATCATGGTCGAGTTGCTTCTTTTCTACACTTTAGAAGAACTGCTTCATTATTCACCACATGGTCTCTACCTCTATGTCAACTATTCCATGAATTTTGAGATCCCGTATAAACTATTATTGTACGGCCTTCTGTCATCTGAACTTGCTGAGAATCATTCATAATTTGCTTGATTCATATATTTCTTGTGCTGCAATATATATGTTATATGTATTTTTGTTCTTTTGCAGATTCTTGGCAATTCTGGCCTGAAAATGGAGGTTGAGGTGCCTGTCGATTAAGATGTTGAAGTTTGGAAACGATAGATTACTAGCTGAAGCATCATATATCAATGTCTTTCTCAAGCAATGTTCATTGTCGATGGACAACTTCAATTCCTCAAACATGTTCATTTATGCAATTATTTACTCAACTTAAGCCTGTGGCTCGTCTTTTTGTAGACAGATATTGATCTCAAAGATTACGAACTATCTTAATGAAAATCTCCCTAAAACCAATTATTTCTTGTCAAATTTGCATCAACTACTGTCTCTAACTTCGACTGAACTCGGAAGATCGAGCGATTGAGACATGATAAGTAGGAGAAATCTATTATCATAAACTGAGGGAATCTGATTAGCCATTTAGATTGTCTTAGATGTATGTATGTATGAGGATCATCTGAATTGGTTCTGGGTTATTCATTATACAATATACTTCCTAAGACCATCATATTTGGCTTTTATGGTGAAGATAAGGTTGATGGTTTTAGTATGCTGCAGGGTTTTGATGACGCCAAAGCTTCTGTAGAAATGGAGCCAAAACTTGCCAGCGTGTAG AAATTAATTTTATTACTTTCAGAATAATTTCTGAACATGTCCTGAAATCAAACAAAAACAGCCGAATTCGGAGTTCTCCGCCCCAGATCGGCCACTACTCGGATCCTTTTACCATTTCTGATCACTTTCTGTTTGGGTTCGTGGAAAATTTTCTGATCAATCTACGAATAACTCCACAGAATTCAATTACTTCGTTCTCTGAAGTTTGACGAGTTTCTGATCCTCGGTGATTTCTACAGTTGTTTTGATTTCGCCTCTTTCTGTAGCAAATTCTAGGCAATCTTCCTCCGTACAAATTGCCTACATTTTGCTACTTCTTCCTCGAGGTGAGAACGTAGATTTTGATTTGCGTTCATTGAATCTCAGCGACGAACAATGGGAAATTCCTCCTCGATGCTCACTCAATATGATATTGAAGAAGTTCAACAGCACTGCGATAATCTGTTTACGCAACAAGAAATAGTGTCACTGTATCAGAGATTTTGTCAACTCGATCGAAACTCGAAGGGATACATCTTGTCCGACGAGTTCTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGAGGTTGCTGAAGATGGTTGATGGTTTGAACTTCAAAGATTTCGTGGCATTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACGTAAAATTGAATTTATGTTCAAAGTGTACGATGTGGACTTTAATGGGAAGGTGTCTTTCAATGACATAATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGCAAGTCTTGAGCCAACTTCTGGAGGAAGCAGGTTACTCAAAGGAATCCCAGTTAACCCAGGAGGATTTCGTTATGATTCTTGGCAATTCTGGCCTGAAAATGGAGGTTGAGGGTTTTGATGACGCCAAAGCTTCTGTAGAAATGGAGCCAAAACTTGCCAGCGTGTAG ATGGGAAATTCCTCCTCGATGCTCACTCAATATGATATTGAAGAAGTTCAACAGCACTGCGATAATCTGTTTACGCAACAAGAAATAGTGTCACTGTATCAGAGATTTTGTCAACTCGATCGAAACTCGAAGGGATACATCTTGTCCGACGAGTTCTTATCAGTCCCAGAATTCGCTATGAATCCTCTTTCTCAGAGGTTGCTGAAGATGGTTGATGGTTTGAACTTCAAAGATTTCGTGGCATTTTTGTCTGCATTTAGTGCTAAAGCTAGCATCCAACGTAAAATTGAATTTATGTTCAAAGTGTACGATGTGGACTTTAATGGGAAGGTGTCTTTCAATGACATAATAGAAGTGCTACAGGATTTGTCTGGTCCCTTCATGTCTGATGACCAAAGAAAGCAAGTCTTGAGCCAACTTCTGGAGGAAGCAGGTTACTCAAAGGAATCCCAGTTAACCCAGGAGGATTTCGTTATGATTCTTGGCAATTCTGGCCTGAAAATGGAGGTTGAGGGTTTTGATGACGCCAAAGCTTCTGTAGAAATGGAGCCAAAACTTGCCAGCGTGTAG
BLAST of CmoCh14G014070.1 vs. Swiss-Prot
Match: CANB1_NAEGR (Calcineurin subunit B OS=Naegleria gruberi GN=CNB1 PE=3 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27 Identity = 67/172 (38.95%), Postives = 111/172 (64.53%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. Swiss-Prot
Match: CANB1_DICDI (Calcineurin subunit B type 1 OS=Dictyostelium discoideum GN=cnbA PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.3e-24 Identity = 53/168 (31.55%), Postives = 110/168 (65.48%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. Swiss-Prot
Match: CANB2_DICDI (Calcineurin subunit B type 2 OS=Dictyostelium discoideum GN=cnbB PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 8.3e-22 Identity = 61/174 (35.06%), Postives = 103/174 (59.20%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. Swiss-Prot
Match: CANB_NEUCR (Calcineurin subunit B OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cnb-1 PE=2 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21 Identity = 56/175 (32.00%), Postives = 112/175 (64.00%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. Swiss-Prot
Match: CANB_CRYNJ (Calcineurin subunit B OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNB1 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19 Identity = 50/148 (33.78%), Postives = 91/148 (61.49%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TrEMBL
Match: A0A0A0KTI1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006370 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 8.5e-82 Identity = 159/171 (92.98%), Postives = 163/171 (95.32%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TrEMBL
Match: A0A0A0KBS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432270 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 2.9e-74 Identity = 140/171 (81.87%), Postives = 161/171 (94.15%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TrEMBL
Match: Q93VF2_EUCCA (Calcineurin-like protein OS=Eucalyptus camaldulensis GN=EcCBL1 PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.7e-72 Identity = 139/171 (81.29%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TrEMBL
Match: A0A059BYK8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03918 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.7e-72 Identity = 139/171 (81.29%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TrEMBL
Match: Q7FZ95_EUCGR (Calcineurin-like protein OS=Eucalyptus grandis GN=EgCBL1 PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.7e-72 Identity = 139/171 (81.29%), Postives = 158/171 (92.40%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TAIR10
Match: AT3G18430.1 (AT3G18430.1 Calcium-binding EF-hand family protein) HSP 1 Score: 262.7 bits (670), Expect = 1.8e-70 Identity = 130/171 (76.02%), Postives = 155/171 (90.64%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TAIR10
Match: AT3G51920.1 (AT3G51920.1 calmodulin 9) HSP 1 Score: 54.7 bits (130), Expect = 7.3e-08 Identity = 31/132 (23.48%), Postives = 69/132 (52.27%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TAIR10
Match: AT4G16350.1 (AT4G16350.1 calcineurin B-like protein 6) HSP 1 Score: 52.0 bits (123), Expect = 4.7e-07 Identity = 40/147 (27.21%), Postives = 74/147 (50.34%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TAIR10
Match: AT5G47100.1 (AT5G47100.1 calcineurin B-like protein 9) HSP 1 Score: 51.6 bits (122), Expect = 6.1e-07 Identity = 35/154 (22.73%), Postives = 76/154 (49.35%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. TAIR10
Match: AT4G17615.1 (AT4G17615.1 calcineurin B-like protein 1) HSP 1 Score: 48.1 bits (113), Expect = 6.8e-06 Identity = 38/165 (23.03%), Postives = 82/165 (49.70%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. NCBI nr
Match: gi|659108419|ref|XP_008454189.1| (PREDICTED: calcineurin subunit B-like [Cucumis melo]) HSP 1 Score: 311.6 bits (797), Expect = 9.3e-82 Identity = 159/171 (92.98%), Postives = 164/171 (95.91%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. NCBI nr
Match: gi|449468944|ref|XP_004152181.1| (PREDICTED: calcineurin subunit B-like [Cucumis sativus]) HSP 1 Score: 311.2 bits (796), Expect = 1.2e-81 Identity = 159/171 (92.98%), Postives = 163/171 (95.32%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. NCBI nr
Match: gi|449436166|ref|XP_004135865.1| (PREDICTED: calcineurin subunit B [Cucumis sativus]) HSP 1 Score: 286.2 bits (731), Expect = 4.2e-74 Identity = 140/171 (81.87%), Postives = 161/171 (94.15%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. NCBI nr
Match: gi|659122439|ref|XP_008461145.1| (PREDICTED: calcineurin subunit B-like [Cucumis melo]) HSP 1 Score: 285.8 bits (730), Expect = 5.5e-74 Identity = 140/171 (81.87%), Postives = 161/171 (94.15%), Query Frame = 1
BLAST of CmoCh14G014070.1 vs. NCBI nr
Match: gi|629105281|gb|KCW70750.1| (hypothetical protein EUGRSUZ_F03918 [Eucalyptus grandis]) HSP 1 Score: 278.9 bits (712), Expect = 6.7e-72 Identity = 139/171 (81.29%), Postives = 158/171 (92.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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