CmoCh13G000930.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000930.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Copper transporter, putative
Location	Cmo_Chr13 : 546469 .. 547012 (+)
Sequence length	516

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCGCCGACAACGCATACCACCACCATATGCACGGAATGGCGCCGCCGAAGGATTCCTCCACCGCATCGCCGGAGATGACGCACGGCACGATGATGCTGCACATGACCTTCTTTTGGGGAGACAACGCCGAGATTCTGTTCAATCGCTGGCCTGGCGAACGCGGCGGCATGTACGCCTTGGCCTTGATCTTCGTTTTCGTGCTTGCTTTGATCGTCGAGTGGCTTTCGCATAGCCGATTGATTAAGGAAGATTCGAGCGCCGCGGCGGCAAGATTGATCCGGACTCTTTTGCATAGGGTTAGGGTTGGATTGGTGTATTTAGTGATGCTAGCCGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCCATCGGTGGCCATTGCCTCGGATTCTTGCTGTTTGGGAGTAGATTGTTCAAGAAATCGGCCGTGGCTTCTGGTAAATCCTCTGTTCTTCCTTCTCTTAGTTGTTGAAATCACGATGAAGGAATATGAAAATTTTCAATCCAATTGGTTTAGGTTTCGATTCAATTGTTAA

mRNA sequence

ATGGACGCCGCCGACAACGCATACCACCACCATATGCACGGAATGGCGCCGCCGAAGGATTCCTCCACCGCATCGCCGGAGATGACGCACGGCACGATGATGCTGCACATGACCTTCTTTTGGGGAGACAACGCCGAGATTCTGTTCAATCGCTGGCCTGGCGAACGCGGCGGCATGTACGCCTTGGCCTTGATCTTCGTTTTCGTGCTTGCTTTGATCGTCGAGTGGCTTTCGCATAGCCGATTGATTAAGGAAGATTCGAGCGCCGCGGCGGCAAGATTGATCCGGACTCTTTTGCATAGGGTTAGGGTTGGATTGGTGTATTTAGTGATGCTAGCCGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCCATCGGTGGCCATTGCCTCGGATTCTTGCTGTTTGGGAGTAGATTGTTCAAGAAATCGGCCGTGGCTTCTGTTGTTGAAATCACGATGAAGGAATATGAAAATTTTCAATCCAATTGGTTTAGGTTTCGATTCAATTGTTAA

Coding sequence (CDS)

ATGGACGCCGCCGACAACGCATACCACCACCATATGCACGGAATGGCGCCGCCGAAGGATTCCTCCACCGCATCGCCGGAGATGACGCACGGCACGATGATGCTGCACATGACCTTCTTTTGGGGAGACAACGCCGAGATTCTGTTCAATCGCTGGCCTGGCGAACGCGGCGGCATGTACGCCTTGGCCTTGATCTTCGTTTTCGTGCTTGCTTTGATCGTCGAGTGGCTTTCGCATAGCCGATTGATTAAGGAAGATTCGAGCGCCGCGGCGGCAAGATTGATCCGGACTCTTTTGCATAGGGTTAGGGTTGGATTGGTGTATTTAGTGATGCTAGCCGTCATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCCATCGGTGGCCATTGCCTCGGATTCTTGCTGTTTGGGAGTAGATTGTTCAAGAAATCGGCCGTGGCTTCTGTTGTTGAAATCACGATGAAGGAATATGAAAATTTTCAATCCAATTGGTTTAGGTTTCGATTCAATTGTTAA

Homology

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BLAST of CmoCh13G000930.1 vs. Swiss-Prot
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-38
Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = 1


Query: 9   HHHMHGMAPPKDSSTASPEMT-------------HGTMMLHMTFFWGDNAEILFNRWPGE 68
           H HMHGM  P  SS++SP                H  MM+HMTFFWG N E+LF+ WPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 69  RGGMYALALIFVFVLALIVEWLSHSRLIK---EDSSAAAARLIRTLLHRVRVGLVYLVML 128
             GMYAL LIFVF LA++ EWL+HS L++    DS+  AA LI+T ++ +R+GL YLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 129 AVMSFNVGVFLVAIGGHCLGFLLFGSRLFKKSA 146
           AVMSFN GVFLVA+ GH +GF+LFGS+ F+ ++
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTS 155

[Close]

BLAST of CmoCh13G000930.1 vs. Swiss-Prot
Match: COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-34
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 1


Query: 9   HHHMHGMAPPKDSSTA-SPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFV 68
           H HMH M PP  SS++ S   T   MM+HMTFFWG N E+LF+ WPG   GMYAL LI +
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FVLALIVEWLSHSRLIK-EDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAI 128
           F+LA+I EWL+HS +++   S+  AA L +T ++ ++ GL YLVMLAVMSFN GVF+VAI
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFLLFGSRLFKK 144
            G+ +GF LFGS  FKK
Sbjct: 123 AGYGVGFFLFGSTTFKK 139

[Close]

BLAST of CmoCh13G000930.1 vs. Swiss-Prot
Match: COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-31
Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 1


Query: 13  HGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFVFVLAL 72
           HG  PP   S+         +M+HMTFFWG N EILF+ WPG   GMY L LI VF+LA+
Sbjct: 3   HGNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAV 62

Query: 73  IVEWLSHSRLIKEDSSAAAAR-LIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAIGGHCL 132
           IVEWL+HS +++   S + A+ L++T ++ ++ GL YLVMLAVMSFN GVF+VAI G  +
Sbjct: 63  IVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAV 122

Query: 133 GFLLFGSRLFK 143
           GF+LFGS  FK
Sbjct: 123 GFMLFGSTAFK 133

[Close]

BLAST of CmoCh13G000930.1 vs. Swiss-Prot
Match: COPT1_ORYSJ (Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-28
Identity = 74/138 (53.62%), Postives = 87/138 (63.04%), Query Frame = 1


Query: 10  HHMHGMAPPKDSSTASPEMTHGTMM--LHMTFFWGDNAEILFNRWPGERGGMYALALIFV 69
           H M GM+PP   + A   M     M   HMTFFWG N+E+LF  WPG RGGMYALALIFV
Sbjct: 6   HDMGGMSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFV 65

Query: 70  FVLALIVEWLSHSR-----LIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVF 129
           F LA+IVE+L   R           + AA  L R  +H VRVG+ YL+MLA+MSFN GVF
Sbjct: 66  FALAVIVEFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVF 125

Query: 130 LVAIGGHCLGFLLFGSRL 141
           LVA+ GH  GFL F + L
Sbjct: 126 LVAVAGHAAGFLAFRAGL 143

[Close]

BLAST of CmoCh13G000930.1 vs. Swiss-Prot
Match: COPT2_ORYSJ (Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-25
Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 1


Query: 13  HGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFVFVLAL 72
           +GMA P       P        +HMTFFWG N E+LF  WPG RGGMYALA++F+F LA+
Sbjct: 6   NGMAMPPP-----PAPVKKARYMHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAV 65

Query: 73  IVEWLSH----SRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAIGG 132
           ++E+  +    +RL +  +  AAA L RT +H VRVG+ YL+MLA+MSFN GVFL  + G
Sbjct: 66  LLEFRGYRVLEARLARRRAPRAAAAL-RTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAG 125

Query: 133 HCLGFLLFGSRL 141
           H  GFL F + L
Sbjct: 126 HAAGFLAFRAGL 131

[Close]

BLAST of CmoCh13G000930.1 vs. TrEMBL
Match: A0A0A0LVF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-59
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 1


Query: 1   MDAADNAYHHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMY 60
           MDAA  A++HHMHGM PP DSSTASPEM H  MM+HMTFFWG NAEILF+RWPGER GMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVG 120
           ALALIF+FVLA +VEWL+H RLIKEDSS AAA LIRTL+H VRVGL YLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAIGGHCLGFLLFGSRLFKKS-AVASVVEI 153
           V LVAIGGHCLGF LFGS+ FK+S AV++ V++
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVSAYVKL 153

[Close]

BLAST of CmoCh13G000930.1 vs. TrEMBL
Match: A0A061GWU0_THECC (Copper transporter, putative OS=Theobroma cacao GN=TCM_041729 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-41
Identity = 92/141 (65.25%), Postives = 107/141 (75.89%), Query Frame = 1


Query: 5   DNAYHHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALAL 64
           +N  H HM+GM    D S A   M H  MM+HMTFFWG NAEILF+ WPG R GMY LAL
Sbjct: 2   ENMNHDHMNGM---NDESAAGGTMHHHMMMMHMTFFWGKNAEILFSGWPGTRTGMYVLAL 61

Query: 65  IFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLV 124
           I VFVL  +VEW+SHS+LIK  S+  AA +++TLLH +RVGL YLVMLAVMSFN GVFL 
Sbjct: 62  IVVFVLGFMVEWISHSQLIKPGSTHVAAGVVQTLLHALRVGLAYLVMLAVMSFNGGVFLA 121

Query: 125 AIGGHCLGFLLFGSRLFKKSA 146
           A+ GH LGFLLFGSR+FKKS+
Sbjct: 122 AVAGHTLGFLLFGSRVFKKSS 139

[Close]

BLAST of CmoCh13G000930.1 vs. TrEMBL
Match: D7SK60_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05750 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40
Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 1   MDAADNAYHHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMY 60
           MD   +  H HMH M+PP  +ST  P M H  MM+HMTF+WG  AEILF+ WPG R GMY
Sbjct: 1   MDHDHDHDHGHMH-MSPPPANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMY 60

Query: 61  ALALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVG 120
           ALALI VFV+A+IVEWLSH +LIK  S+  AA +++TLLH +R+GL Y+VMLA+MSFN G
Sbjct: 61  ALALIVVFVMAIIVEWLSHFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGG 120

Query: 121 VFLVAIGGHCLGFLLFGSRLFKKS 145
           +FLVA+ GH +GFL+FGSRLF+ S
Sbjct: 121 MFLVAVAGHAVGFLVFGSRLFRGS 143

[Close]

BLAST of CmoCh13G000930.1 vs. TrEMBL
Match: E9LK41_VITVI (Copper transporter OS=Vitis vinifera GN=CTr4 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40
Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 1   MDAADNAYHHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMY 60
           MD   +  H HMH M+PP  +ST  P M H  MM+HMTF+WG  AEILF+ WPG R GMY
Sbjct: 18  MDHDHDHDHGHMH-MSPPPANSTGMPPMHHMEMMMHMTFYWGKKAEILFSGWPGTRSGMY 77

Query: 61  ALALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVG 120
           ALALI VFV+A+IVEWLSH +LIK  S+  AA +++TLLH +R+GL Y+VMLA+MSFN G
Sbjct: 78  ALALIVVFVMAIIVEWLSHFQLIKPGSTHVAAGVVQTLLHAIRMGLEYMVMLALMSFNGG 137

Query: 121 VFLVAIGGHCLGFLLFGSRLFKKS 145
           +FLVA+ GH +GFL+FGSRLF+ S
Sbjct: 138 MFLVAVAGHAVGFLVFGSRLFRGS 160

[Close]

BLAST of CmoCh13G000930.1 vs. TrEMBL
Match: E9LK42_VITVI (Copper transporter OS=Vitis vinifera GN=CTr5 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.3e-40
Identity = 87/141 (61.70%), Postives = 109/141 (77.30%), Query Frame = 1


Query: 9   HHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFVF 68
           H HMH M+PP  +ST    M H  MM+HMTF+WG  AEILF+ WPG R GMYALALI VF
Sbjct: 5   HDHMH-MSPPPANSTGMSPMHHMEMMMHMTFYWGKEAEILFSGWPGARSGMYALALIVVF 64

Query: 69  VLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAIGG 128
           V+ +IVEWLS+ RLIK  S+ AAA L++TLLH +R+GL Y+VMLA+MSFN GVFLVA+ G
Sbjct: 65  VMGIIVEWLSYCRLIKPGSTHAAAGLVQTLLHTIRIGLAYMVMLALMSFNGGVFLVAVAG 124

Query: 129 HCLGFLLFGSRLFKKSAVASV 150
           H +GFL+FGSR+ + S + S+
Sbjct: 125 HAVGFLVFGSRVCRGSEMVSL 144

[Close]

BLAST of CmoCh13G000930.1 vs. TAIR10
Match: AT5G59030.1 (AT5G59030.1 copper transporter 1)

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-39
Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = 1


Query: 9   HHHMHGMAPPKDSSTASPEMT-------------HGTMMLHMTFFWGDNAEILFNRWPGE 68
           H HMHGM  P  SS++SP                H  MM+HMTFFWG N E+LF+ WPG 
Sbjct: 3   HDHMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGT 62

Query: 69  RGGMYALALIFVFVLALIVEWLSHSRLIK---EDSSAAAARLIRTLLHRVRVGLVYLVML 128
             GMYAL LIFVF LA++ EWL+HS L++    DS+  AA LI+T ++ +R+GL YLVML
Sbjct: 63  SSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVML 122

Query: 129 AVMSFNVGVFLVAIGGHCLGFLLFGSRLFKKSA 146
           AVMSFN GVFLVA+ GH +GF+LFGS+ F+ ++
Sbjct: 123 AVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTS 155

[Close]

BLAST of CmoCh13G000930.1 vs. TAIR10
Match: AT3G46900.1 (AT3G46900.1 copper transporter 2)

HSP 1 Score: 147.5 bits (371), Expect = 7.4e-36
Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 1


Query: 9   HHHMHGMAPPKDSSTA-SPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFV 68
           H HMH M PP  SS++ S   T   MM+HMTFFWG N E+LF+ WPG   GMYAL LI +
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 69  FVLALIVEWLSHSRLIK-EDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAI 128
           F+LA+I EWL+HS +++   S+  AA L +T ++ ++ GL YLVMLAVMSFN GVF+VAI
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 129 GGHCLGFLLFGSRLFKK 144
            G+ +GF LFGS  FKK
Sbjct: 123 AGYGVGFFLFGSTTFKK 139

[Close]

BLAST of CmoCh13G000930.1 vs. TAIR10
Match: AT2G26975.1 (AT2G26975.1 Ctr copper transporter family)

HSP 1 Score: 137.5 bits (345), Expect = 7.7e-33
Identity = 70/131 (53.44%), Postives = 91/131 (69.47%), Query Frame = 1


Query: 13  HGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFVFVLAL 72
           HG  PP   S+         +M+HMTFFWG N EILF+ WPG   GMY L LI VF+LA+
Sbjct: 3   HGNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAV 62

Query: 73  IVEWLSHSRLIKEDSSAAAAR-LIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAIGGHCL 132
           IVEWL+HS +++   S + A+ L++T ++ ++ GL YLVMLAVMSFN GVF+VAI G  +
Sbjct: 63  IVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAV 122

Query: 133 GFLLFGSRLFK 143
           GF+LFGS  FK
Sbjct: 123 GFMLFGSTAFK 133

[Close]

BLAST of CmoCh13G000930.1 vs. TAIR10
Match: AT2G37925.1 (AT2G37925.1 copper transporter 4)

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-26
Identity = 61/125 (48.80%), Postives = 80/125 (64.00%), Query Frame = 1


Query: 21  SSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFVFVLALIVEWL--- 80
           ++T   +  H   +LH TF+WG N ++LF+ WPG   GMYALALIFVF LA + EWL   
Sbjct: 16  TTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARC 75

Query: 81  SHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAIGGHCLGFLLFG 140
           S +  IK+ +   A    RT ++ V+ G  YLV+LAV+SFN GVFL AI GH LGF +F 
Sbjct: 76  SDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFR 135

Query: 141 SRLFK 143
            R F+
Sbjct: 136 GRAFR 140

[Close]

BLAST of CmoCh13G000930.1 vs. TAIR10
Match: AT5G59040.1 (AT5G59040.1 copper transporter 3)

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-24
Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 1


Query: 12  MHGMAP----PKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALALIFV 71
           M G +P    P  SS       HG MM HMTFFWG   E+LF+ WPG    MY + L  +
Sbjct: 4   MSGSSPAAPAPSPSSFFQHRHRHGGMM-HMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVI 63

Query: 72  FVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLVAIG 131
           FV++   E LS    +K   ++    L++T ++ VR  L YLVMLAVMSFN GVF+ A+ 
Sbjct: 64  FVISAFSECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMA 123

Query: 132 GHCLGFLLFGSRLFKKSAVASVVEI 153
           G  LGF++FGSR F+ ++  S  E+
Sbjct: 124 GFGLGFMIFGSRAFRATSSNSHTEV 147

[Close]

BLAST of CmoCh13G000930.1 vs. NCBI nr
Match: gi|449455068|ref|XP_004145275.1| (PREDICTED: copper transporter 1-like [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 1.5e-59
Identity = 119/153 (77.78%), Postives = 133/153 (86.93%), Query Frame = 1


Query: 1   MDAADNAYHHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMY 60
           MDAA  A++HHMHGM PP DSSTASPEM H  MM+HMTFFWG NAEILF+RWPGER GMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVG 120
           ALALIF+FVLA +VEWL+H RLIKEDSS AAA LIRTL+H VRVGL YLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAIGGHCLGFLLFGSRLFKKS-AVASVVEI 153
           V LVAIGGHCLGF LFGS+ FK+S AV++ V++
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVSAYVKL 153

[Close]

BLAST of CmoCh13G000930.1 vs. NCBI nr
Match: gi|659115179|ref|XP_008457427.1| (PREDICTED: copper transporter 1 [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 4.5e-59
Identity = 119/153 (77.78%), Postives = 132/153 (86.27%), Query Frame = 1


Query: 1   MDAADNAYHHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMY 60
           MDAA  A++HHMHGM PP DSSTASPEM H  MM+HMTFFWG NAEILF+RWPGER GMY
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVG 120
           ALALI +FVLA +VEWL+H RLIKEDSS AAA LIRTL+H VRVGL YLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VFLVAIGGHCLGFLLFGSRLFKKS-AVASVVEI 153
           V LVAIGGHCLGF LFGSR FK+S AV++ V++
Sbjct: 121 VLLVAIGGHCLGFFLFGSRFFKRSEAVSAYVKL 153

[Close]

BLAST of CmoCh13G000930.1 vs. NCBI nr
Match: gi|1009108691|ref|XP_015886064.1| (PREDICTED: copper transporter 1-like [Ziziphus jujuba])

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41
Identity = 92/145 (63.45%), Postives = 109/145 (75.17%), Query Frame = 1


Query: 1   MDAADNAYHHHMHGMA-PPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGM 60
           M+  D+  HH M  MA PP  + T      H  MM+HMTFFWG NAEILFN+WPG   GM
Sbjct: 1   MEGMDHG-HHDMGDMASPPSMNGTEGMPHHHKMMMMHMTFFWGKNAEILFNKWPGTSTGM 60

Query: 61  YALALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNV 120
           Y LAL+F+FVLAL+VEWLSH +LIK+ S+  AA L++T LH +RVGL Y+VMLAVMSFNV
Sbjct: 61  YVLALVFIFVLALLVEWLSHCKLIKDGSNHVAAGLVQTFLHAIRVGLAYMVMLAVMSFNV 120

Query: 121 GVFLVAIGGHCLGFLLFGSRLFKKS 145
           GVFLVAI GH +GF  FGSR+FKKS
Sbjct: 121 GVFLVAIAGHTVGFFFFGSRVFKKS 144

[Close]

BLAST of CmoCh13G000930.1 vs. NCBI nr
Match: gi|590588707|ref|XP_007016269.1| (Copper transporter, putative [Theobroma cacao])

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-41
Identity = 92/141 (65.25%), Postives = 107/141 (75.89%), Query Frame = 1


Query: 5   DNAYHHHMHGMAPPKDSSTASPEMTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYALAL 64
           +N  H HM+GM    D S A   M H  MM+HMTFFWG NAEILF+ WPG R GMY LAL
Sbjct: 2   ENMNHDHMNGM---NDESAAGGTMHHHMMMMHMTFFWGKNAEILFSGWPGTRTGMYVLAL 61

Query: 65  IFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGVFLV 124
           I VFVL  +VEW+SHS+LIK  S+  AA +++TLLH +RVGL YLVMLAVMSFN GVFL 
Sbjct: 62  IVVFVLGFMVEWISHSQLIKPGSTHVAAGVVQTLLHALRVGLAYLVMLAVMSFNGGVFLA 121

Query: 125 AIGGHCLGFLLFGSRLFKKSA 146
           A+ GH LGFLLFGSR+FKKS+
Sbjct: 122 AVAGHTLGFLLFGSRVFKKSS 139

[Close]

BLAST of CmoCh13G000930.1 vs. NCBI nr
Match: gi|1000963312|ref|XP_015575496.1| (PREDICTED: copper transporter 1 [Ricinus communis])

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-41
Identity = 95/147 (64.63%), Postives = 108/147 (73.47%), Query Frame = 1


Query: 10  HHMHGMAPPKDSSTASPE--------MTHGTMMLHMTFFWGDNAEILFNRWPGERGGMYA 69
           H M GM     SST +          M H  MM+HMTFFWG+NAEILF+ WPG R GMY 
Sbjct: 5   HDMPGMGGMTPSSTMNNTNSTGGGMMMHHHKMMMHMTFFWGENAEILFSGWPGARTGMYV 64

Query: 70  LALIFVFVLALIVEWLSHSRLIKEDSSAAAARLIRTLLHRVRVGLVYLVMLAVMSFNVGV 129
           LALIFVFVL+ +VEWLSHSRLIK  S    A LI+TLLH +RVGL YLVMLAVMSFN GV
Sbjct: 65  LALIFVFVLSFLVEWLSHSRLIKPGSPHVTAGLIQTLLHTMRVGLAYLVMLAVMSFNGGV 124

Query: 130 FLVAIGGHCLGFLLFGSRLFKKSAVAS 149
           FLVA+ GHCLGFL+FGSR+FKK+  A+
Sbjct: 125 FLVAVAGHCLGFLIFGSRVFKKTPPAA 151

The following BLAST results are available for this feature:

BLAST of CmoCh13G000930.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COPT1_ARATH	5.7e-38	53.59	Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2	[more]
COPT2_ARATH	1.3e-34	56.20	Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1	[more]
COPT6_ARATH	1.4e-31	53.44	Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1	[more]
COPT1_ORYSJ	1.8e-28	53.62	Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1	[more]
COPT2_ORYSJ	2.5e-25	49.24	Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1 SV=1	[more]

BLAST of CmoCh13G000930.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVF3_CUCSA	1.1e-59	77.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1	[more]
A0A061GWU0_THECC	1.7e-41	65.25	Copper transporter, putative OS=Theobroma cacao GN=TCM_041729 PE=4 SV=1	[more]
D7SK60_VITVI	1.1e-40	61.81	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g05750 PE=4 SV=...	[more]
E9LK41_VITVI	1.1e-40	61.81	Copper transporter OS=Vitis vinifera GN=CTr4 PE=2 SV=1	[more]
E9LK42_VITVI	3.3e-40	61.70	Copper transporter OS=Vitis vinifera GN=CTr5 PE=2 SV=1	[more]

BLAST of CmoCh13G000930.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59030.1	3.2e-39	53.59	copper transporter 1	[more]
AT3G46900.1	7.4e-36	56.20	copper transporter 2	[more]
AT2G26975.1	7.7e-33	53.44	Ctr copper transporter family	[more]
AT2G37925.1	5.3e-26	48.80	copper transporter 4	[more]
AT5G59040.1	5.0e-24	43.45	copper transporter 3	[more]

BLAST of CmoCh13G000930.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455068\|ref\|XP_004145275.1\|	1.5e-59	77.78	PREDICTED: copper transporter 1-like [Cucumis sativus]	[more]
gi\|659115179\|ref\|XP_008457427.1\|	4.5e-59	77.78	PREDICTED: copper transporter 1 [Cucumis melo]	[more]
gi\|1009108691\|ref\|XP_015886064.1\|	1.1e-41	63.45	PREDICTED: copper transporter 1-like [Ziziphus jujuba]	[more]
gi\|590588707\|ref\|XP_007016269.1\|	2.5e-41	65.25	Copper transporter, putative [Theobroma cacao]	[more]
gi\|1000963312\|ref\|XP_015575496.1\|	2.5e-41	64.63	PREDICTED: copper transporter 1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007274	Cop_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0005375	copper ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0035434	copper ion transmembrane transport

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh13G000930	CmoCh13G000930	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000930.1	CmoCh13G000930.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000930.1.exon.1	CmoCh13G000930.1.exon.1	exon
CmoCh13G000930.1.exon.2	CmoCh13G000930.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000930.1.CDS.1	CmoCh13G000930.1.CDS.1	CDS
CmoCh13G000930.1.CDS.2	CmoCh13G000930.1.CDS.2	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 2..143 score: 5.8
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 37..136 score: 7.1
None	No IPR available	PANTHER	PTHR12483:SF45	SUBFAMILY NOT NAMED	coord: 2..143 score: 5.8