CmoCh13G000610.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000610.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pentatricopeptide repeat-containing family protein
Location	Cmo_Chr13 : 379271 .. 381331 (-)
Sequence length	2061

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCGTACCGGCCTCTTCTTCGACCCCTTCTCCGCCAGCAAGCTCATCGCAGCCTCTGCTCTTAAGTCCTCCTCCACTCTTGAGTATGCCCGTGATGTGTTCGACCAAATTCCCCATCCAAATCTCTACACTTGGAACACCCTCATTCGAGCTTACGCTTCCAGCGCCGACCCTTTTCAGAGTTTCGTGATATTTCTGGCCTTGCTTGATGAATGTGACGATTTGCCCAACAATTTCACTTTCCCGTTTGTCATCAAGGCCGCTTCGGAGCTAAAAGCGTCGCGGGTCGGCAGAGCTGTTCATGGAATGGCGATTAAGTTGTCGCTTGGTATGGATCAGTATATTCTTAATTCGCTTGTGCGATTCTATGGGGCGTGTGGGGATTTGAATATGGCTGAGCGATTGTTTGAGGGTATTTCTTGCAAAGATGTGGTGTCTTGGAATTCGATGATCTCGGCTTTTGCTCAGGGGAATTGTCCAGAAGATGCATTGGAGTTGTTCTTGAAAATGGAGGGGGCGAATGTGATGCCCAACTCTGTAACAATGGTGGGTGTTTTATCTGCTTGTGCGAAGAAGTTGGATTTGGAGTTTGGGAGGTGGGTTTGTTCGTACATTGAAAGGAAAGAAATTAGTGTGGATTTAACTCTGTGTAACGCCATGCTCGACATGTATACTAAATGTGGAAGCATTGGCGATGCAGAGAAGCTGTTCGACGAAATGCCTGAAAGAGATGTCTTCTCTTGGACTACCATGCTTGATGGGTATGCGAAAATGGGCGATTTCAATGCTGCTCGGAAGGTGTTTGATGAAATGCCTGTGAAAGAAATTGCTGCTTGGAATGCTCTCATATCTGCTTATGAACGAAATGGTAAGCCTAAGGAGGCTTTGGCCACTTTTAATGAGCTGCAGCTTAGTAAGATTGCCAAGCCCGATGAAGTCACTCTGGTCAGTTCTCTGTCAGCCTGTGCTCAATTGGGGGCAATTGATTTGGGTGGGTGGATTCATGTGTACATAAAGAGGGAAGGGATAAATCTAAACGGTCATTTAATTACTTCTCTTATAGACATGTATGCTAAATGTGGTGCTTTGGAGAAAGCTCTTGAGGTGTTCTATGCAGTGGAGGAGAAAGATGTGTATGTTTGGAGTGCCATGATTGCTGGCTTGGGAATGCACGGCCGTGGGAAGGCGGCGATCGAACTGTTCTTCAAAATGCAGGAAGCTAAGGTGAAGCCGAACGATGTGACATTTACGAATCTACTGTGTGCCTGCAGCCATGCTGGATTAGTCGACGAGGGACGAGCACTTTTCCATGAAATGGAGCCAGTTTATGGGGTTGTGCCGGGAACGAAACATTACGCTTGTATGGTTGATATTCTCGGCCGTGCCGGGTTTCTTGAAGAAGCTATGGAGTTGATCAATGAAATGCCTACAACTCCAAGCGCCTCGGTTTGGGGTGCTTTGCTTGGTGCCTGCAGCCTTCATATGAATGTTGAGCTTGCAGAGTTGGCTAGTGACCAATTGCTCAAGTTGGAGCCTAGGAATCATGGTGCTATTATACTTTTATCTAACGTATATGCCAAAACAGGAAGATGGGATAAGGTTTCTGAGTTGAGGAAACTAATGAGAGATTCTGAACTGAAAAAGGAGCCAGGTTGTAGCTCGGTAGAAGTCAACGGCATTGTCCACGAGTTTCTAGTTGGCGATAATTCCCACCCGTTATCCCGGGACATCTACTCGAAGCTGGACGAGATTGCAGCAAAACTAAAATCAGTTGGGTACGAACCAAACAAATCCCATCTTCTCCAGCTGATCGAAGAGGACGACGTCAAGGAACATGCCTTGAGCCTTCACAGCGAGAAGTTAGCCATCGCGTTCGGGCTTATCAGTTTGGCTCCATCTCAACCAATTCGAGTTGTGAAGAATCTTCGGATTTGTGGAGACTGTCATGAAGTCGCTAAGCTCATATCTAGAGTTTACAACCGAGATATATTAGTGCAAGATCGATATCGATTCCATCATTTTCGAGACGGTCATTGCTCGTGTATGGATTATTGGTAA

mRNA sequence

ATGCTTCGTACCGGCCTCTTCTTCGACCCCTTCTCCGCCAGCAAGCTCATCGCAGCCTCTGCTCTTAAGTCCTCCTCCACTCTTGAGTATGCCCGTGATGTGTTCGACCAAATTCCCCATCCAAATCTCTACACTTGGAACACCCTCATTCGAGCTTACGCTTCCAGCGCCGACCCTTTTCAGAGTTTCGTGATATTTCTGGCCTTGCTTGATGAATGTGACGATTTGCCCAACAATTTCACTTTCCCGTTTGTCATCAAGGCCGCTTCGGAGCTAAAAGCGTCGCGGGTCGGCAGAGCTGTTCATGGAATGGCGATTAAGTTGTCGCTTGGTATGGATCAGTATATTCTTAATTCGCTTGTGCGATTCTATGGGGCGTGTGGGGATTTGAATATGGCTGAGCGATTGTTTGAGGGTATTTCTTGCAAAGATGTGGTGTCTTGGAATTCGATGATCTCGGCTTTTGCTCAGGGGAATTGTCCAGAAGATGCATTGGAGTTGTTCTTGAAAATGGAGGGGGCGAATGTGATGCCCAACTCTGTAACAATGGTGGGTGTTTTATCTGCTTGTGCGAAGAAGTTGGATTTGGAGTTTGGGAGGTGGGTTTGTTCGTACATTGAAAGGAAAGAAATTAGTGTGGATTTAACTCTGTGTAACGCCATGCTCGACATGTATACTAAATGTGGAAGCATTGGCGATGCAGAGAAGCTGTTCGACGAAATGCCTGAAAGAGATGTCTTCTCTTGGACTACCATGCTTGATGGGTATGCGAAAATGGGCGATTTCAATGCTGCTCGGAAGGTGTTTGATGAAATGCCTGTGAAAGAAATTGCTGCTTGGAATGCTCTCATATCTGCTTATGAACGAAATGGTAAGCCTAAGGAGGCTTTGGCCACTTTTAATGAGCTGCAGCTTAGTAAGATTGCCAAGCCCGATGAAGTCACTCTGGTCAGTTCTCTGTCAGCCTGTGCTCAATTGGGGGCAATTGATTTGGGTGGGTGGATTCATGTGTACATAAAGAGGGAAGGGATAAATCTAAACGGTCATTTAATTACTTCTCTTATAGACATGTATGCTAAATGTGGTGCTTTGGAGAAAGCTCTTGAGGTGTTCTATGCAGTGGAGGAGAAAGATGTGTATGTTTGGAGTGCCATGATTGCTGGCTTGGGAATGCACGGCCGTGGGAAGGCGGCGATCGAACTGTTCTTCAAAATGCAGGAAGCTAAGGTGAAGCCGAACGATGTGACATTTACGAATCTACTGTGTGCCTGCAGCCATGCTGGATTAGTCGACGAGGGACGAGCACTTTTCCATGAAATGGAGCCAGTTTATGGGGTTGTGCCGGGAACGAAACATTACGCTTGTATGGTTGATATTCTCGGCCGTGCCGGGTTTCTTGAAGAAGCTATGGAGTTGATCAATGAAATGCCTACAACTCCAAGCGCCTCGGTTTGGGGTGCTTTGCTTGGTGCCTGCAGCCTTCATATGAATGTTGAGCTTGCAGAGTTGGCTAGTGACCAATTGCTCAAGTTGGAGCCTAGGAATCATGGTGCTATTATACTTTTATCTAACGTATATGCCAAAACAGGAAGATGGGATAAGGTTTCTGAGTTGAGGAAACTAATGAGAGATTCTGAACTGAAAAAGGAGCCAGGTTGTAGCTCGGTAGAAGTCAACGGCATTGTCCACGAGTTTCTAGTTGGCGATAATTCCCACCCGTTATCCCGGGACATCTACTCGAAGCTGGACGAGATTGCAGCAAAACTAAAATCAGTTGGGTACGAACCAAACAAATCCCATCTTCTCCAGCTGATCGAAGAGGACGACGTCAAGGAACATGCCTTGAGCCTTCACAGCGAGAAGTTAGCCATCGCGTTCGGGCTTATCAGTTTGGCTCCATCTCAACCAATTCGAGTTGTGAAGAATCTTCGGATTTGTGGAGACTGTCATGAAGTCGCTAAGCTCATATCTAGAGTTTACAACCGAGATATATTAGTGCAAGATCGATATCGATTCCATCATTTTCGAGACGGTCATTGCTCGTGTATGGATTATTGGTAA

Coding sequence (CDS)

ATGCTTCGTACCGGCCTCTTCTTCGACCCCTTCTCCGCCAGCAAGCTCATCGCAGCCTCTGCTCTTAAGTCCTCCTCCACTCTTGAGTATGCCCGTGATGTGTTCGACCAAATTCCCCATCCAAATCTCTACACTTGGAACACCCTCATTCGAGCTTACGCTTCCAGCGCCGACCCTTTTCAGAGTTTCGTGATATTTCTGGCCTTGCTTGATGAATGTGACGATTTGCCCAACAATTTCACTTTCCCGTTTGTCATCAAGGCCGCTTCGGAGCTAAAAGCGTCGCGGGTCGGCAGAGCTGTTCATGGAATGGCGATTAAGTTGTCGCTTGGTATGGATCAGTATATTCTTAATTCGCTTGTGCGATTCTATGGGGCGTGTGGGGATTTGAATATGGCTGAGCGATTGTTTGAGGGTATTTCTTGCAAAGATGTGGTGTCTTGGAATTCGATGATCTCGGCTTTTGCTCAGGGGAATTGTCCAGAAGATGCATTGGAGTTGTTCTTGAAAATGGAGGGGGCGAATGTGATGCCCAACTCTGTAACAATGGTGGGTGTTTTATCTGCTTGTGCGAAGAAGTTGGATTTGGAGTTTGGGAGGTGGGTTTGTTCGTACATTGAAAGGAAAGAAATTAGTGTGGATTTAACTCTGTGTAACGCCATGCTCGACATGTATACTAAATGTGGAAGCATTGGCGATGCAGAGAAGCTGTTCGACGAAATGCCTGAAAGAGATGTCTTCTCTTGGACTACCATGCTTGATGGGTATGCGAAAATGGGCGATTTCAATGCTGCTCGGAAGGTGTTTGATGAAATGCCTGTGAAAGAAATTGCTGCTTGGAATGCTCTCATATCTGCTTATGAACGAAATGGTAAGCCTAAGGAGGCTTTGGCCACTTTTAATGAGCTGCAGCTTAGTAAGATTGCCAAGCCCGATGAAGTCACTCTGGTCAGTTCTCTGTCAGCCTGTGCTCAATTGGGGGCAATTGATTTGGGTGGGTGGATTCATGTGTACATAAAGAGGGAAGGGATAAATCTAAACGGTCATTTAATTACTTCTCTTATAGACATGTATGCTAAATGTGGTGCTTTGGAGAAAGCTCTTGAGGTGTTCTATGCAGTGGAGGAGAAAGATGTGTATGTTTGGAGTGCCATGATTGCTGGCTTGGGAATGCACGGCCGTGGGAAGGCGGCGATCGAACTGTTCTTCAAAATGCAGGAAGCTAAGGTGAAGCCGAACGATGTGACATTTACGAATCTACTGTGTGCCTGCAGCCATGCTGGATTAGTCGACGAGGGACGAGCACTTTTCCATGAAATGGAGCCAGTTTATGGGGTTGTGCCGGGAACGAAACATTACGCTTGTATGGTTGATATTCTCGGCCGTGCCGGGTTTCTTGAAGAAGCTATGGAGTTGATCAATGAAATGCCTACAACTCCAAGCGCCTCGGTTTGGGGTGCTTTGCTTGGTGCCTGCAGCCTTCATATGAATGTTGAGCTTGCAGAGTTGGCTAGTGACCAATTGCTCAAGTTGGAGCCTAGGAATCATGGTGCTATTATACTTTTATCTAACGTATATGCCAAAACAGGAAGATGGGATAAGGTTTCTGAGTTGAGGAAACTAATGAGAGATTCTGAACTGAAAAAGGAGCCAGGTTGTAGCTCGGTAGAAGTCAACGGCATTGTCCACGAGTTTCTAGTTGGCGATAATTCCCACCCGTTATCCCGGGACATCTACTCGAAGCTGGACGAGATTGCAGCAAAACTAAAATCAGTTGGGTACGAACCAAACAAATCCCATCTTCTCCAGCTGATCGAAGAGGACGACGTCAAGGAACATGCCTTGAGCCTTCACAGCGAGAAGTTAGCCATCGCGTTCGGGCTTATCAGTTTGGCTCCATCTCAACCAATTCGAGTTGTGAAGAATCTTCGGATTTGTGGAGACTGTCATGAAGTCGCTAAGCTCATATCTAGAGTTTACAACCGAGATATATTAGTGCAAGATCGATATCGATTCCATCATTTTCGAGACGGTCATTGCTCGTGTATGGATTATTGGTAA

Homology

[Close]

BLAST of CmoCh13G000610.1 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 906.7 bits (2342), Expect = 1.5e-262
Identity = 426/686 (62.10%), Postives = 543/686 (79.15%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           M+RTG F DP+SASKL A +AL S ++LEYAR VFD+IP PN + WNTLIRAYAS  DP 
Sbjct: 53  MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPV 112

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
            S   FL ++ E    PN +TFPF+IKAA+E+ +  +G+++HGMA+K ++G D ++ NSL
Sbjct: 113 LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           +  Y +CGDL+ A ++F  I  KDVVSWNSMI+ F Q   P+ ALELF KME  +V  + 
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMVGVLSACAK  +LEFGR VCSYIE   ++V+LTL NAMLDMYTKCGSI DA++LFD 
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           M E+D  +WTTMLDGYA   D+ AAR+V + MP K+I AWNALISAYE+NGKP EAL  F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           +ELQL K  K +++TLVS+LSACAQ+GA++LG WIH YIK+ GI +N H+ ++LI MY+K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG LEK+ EVF +VE++DV+VWSAMI GL MHG G  A+++F+KMQEA VKPN VTFTN+
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
            CACSH GLVDE  +LFH+ME  YG+VP  KHYAC+VD+LGR+G+LE+A++ I  MP  P
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           S SVWGALLGAC +H N+ LAE+A  +LL+LEPRN GA +LLSN+YAK G+W+ VSELRK
Sbjct: 533 STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRK 592

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            MR + LKKEPGCSS+E++G++HEFL GDN+HP+S  +Y KL E+  KLKS GYEP  S 
Sbjct: 593 HMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQ 652

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           +LQ+IEE+++KE +L+LHSEKLAI +GLIS    + IRV+KNLR+CGDCH VAKLIS++Y
Sbjct: 653 VLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLY 712

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +R+I+V+DRYRFHHFR+G CSC D+W
Sbjct: 713 DREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]

BLAST of CmoCh13G000610.1 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 2.4e-167
Identity = 303/720 (42.08%), Postives = 436/720 (60.56%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSS-STLEYARDVFDQIPHPNLYTWNTLIRAYASSADP 60
           M++ GL    ++ SKLI    L      L YA  VF  I  PNL  WNT+ R +A S+DP
Sbjct: 56  MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 115

Query: 61  FQSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYI--- 120
             +  +++ ++     LPN++TFPFV+K+ ++ KA + G+ +HG  +KL   +D Y+   
Sbjct: 116 VSALKLYVCMIS-LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 175

Query: 121 ----------------------------LNSLVRFYGACGDLNMAERLFEGISCKDVVSW 180
                                         +L++ Y + G +  A++LF+ I  KDVVSW
Sbjct: 176 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 235

Query: 181 NSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIER 240
           N+MIS +A+    ++ALELF  M   NV P+  TMV V+SACA+   +E GR V  +I+ 
Sbjct: 236 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 295

Query: 241 KEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKV 300
                +L + NA++D+Y+KCG +  A  LF+ +P +DV SW T++ GY  M  +      
Sbjct: 296 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY------ 355

Query: 301 FDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGA 360
                                    KEAL  F E+ L     P++VT++S L ACA LGA
Sbjct: 356 -------------------------KEALLLFQEM-LRSGETPNDVTMLSILPACAHLGA 415

Query: 361 IDLGGWIHVYIKR--EGINLNGHLITSLIDMYAKCGALEKALEVFYAVEEKDVYVWSAMI 420
           ID+G WIHVYI +  +G+     L TSLIDMYAKCG +E A +VF ++  K +  W+AMI
Sbjct: 416 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 475

Query: 421 AGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGV 480
            G  MHGR  A+ +LF +M++  ++P+D+TF  LL ACSH+G++D GR +F  M   Y +
Sbjct: 476 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 535

Query: 481 VPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASD 540
            P  +HY CM+D+LG +G  +EA E+IN M   P   +W +LL AC +H NVEL E  ++
Sbjct: 536 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 595

Query: 541 QLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFL 600
            L+K+EP N G+ +LLSN+YA  GRW++V++ R L+ D  +KK PGCSS+E++ +VHEF+
Sbjct: 596 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 655

Query: 601 VGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHSEKLAIAF 660
           +GD  HP +R+IY  L+E+   L+  G+ P+ S +LQ +EE + KE AL  HSEKLAIAF
Sbjct: 656 IGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE-EWKEGALRHHSEKLAIAF 715

Query: 661 GLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGHCSCMDYW 687
           GLIS  P   + +VKNLR+C +CHE  KLIS++Y R+I+ +DR RFHHFRDG CSC DYW
Sbjct: 716 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of CmoCh13G000610.1 vs. Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 1.8e-151
Identity = 261/680 (38.38%), Postives = 416/680 (61.18%), Query Frame = 1


Query: 14  SKLIAASALKSSSTLEYARDVFDQIPHP-NLYTWNTLIRAYASSADPFQSFVIFLALLDE 73
           S L   S   SS  L YA +VF  IP P     +N  +R  + S++P ++ ++F   +  
Sbjct: 46  SFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEP-RATILFYQRIRH 105

Query: 74  CDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNM 133
                + F+F  ++KA S++ A   G  +HG+A K++   D ++    +  Y +CG +N 
Sbjct: 106 VGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINY 165

Query: 134 AERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAK 193
           A  +F+ +S +DVV+WN+MI  + +    ++A +LF +M+ +NVMP+ + +  ++SAC +
Sbjct: 166 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 225

Query: 194 KLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTM 253
             ++ + R +  ++   ++ +D  L  A++ MY   G +  A + F +M  R++F  T M
Sbjct: 226 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 285

Query: 254 LDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPD 313
           + GY+K G  + A+ +FD+   K++  W  +ISAY  +  P+EAL  F E+  S I KPD
Sbjct: 286 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI-KPD 345

Query: 314 EVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFY 373
            V++ S +SACA LG +D   W+H  I   G+     +  +LI+MYAKCG L+   +VF 
Sbjct: 346 VVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFE 405

Query: 374 AVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDE 433
            +  ++V  WS+MI  L MHG    A+ LF +M++  V+PN+VTF  +L  CSH+GLV+E
Sbjct: 406 KMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEE 465

Query: 434 GRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGAC 493
           G+ +F  M   Y + P  +HY CMVD+ GRA  L EA+E+I  MP   +  +WG+L+ AC
Sbjct: 466 GKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC 525

Query: 494 SLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPG 553
            +H  +EL + A+ ++L+LEP + GA++L+SN+YA+  RW+ V  +R++M +  + KE G
Sbjct: 526 RIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKG 585

Query: 554 CSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKE 613
            S ++ NG  HEFL+GD  H  S +IY+KLDE+ +KLK  GY P+   +L  +EE++ K+
Sbjct: 586 LSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKD 645

Query: 614 HALSLHSEKLAIAFGLISLAPSQP------IRVVKNLRICGDCHEVAKLISRVYNRDILV 673
             L  HSEKLA+ FGL++    +       IR+VKNLR+C DCH   KL+S+VY R+I+V
Sbjct: 646 LVL-WHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIV 705

Query: 674 QDRYRFHHFRDGHCSCMDYW 687
           +DR RFH +++G CSC DYW
Sbjct: 706 RDRTRFHCYKNGLCSCRDYW 722

[Close]

BLAST of CmoCh13G000610.1 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.5e-145
Identity = 269/688 (39.10%), Postives = 410/688 (59.59%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           +L  GL F  F  +KLI AS+  S   + +AR VFD +P P ++ WN +IR Y+ + + F
Sbjct: 44  LLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN-NHF 103

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           Q  ++  + +      P++FTFP ++KA S L   ++GR VH    +L    D ++ N L
Sbjct: 104 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 163

Query: 121 VRFYGACGDLNMAERLFEGISCKD--VVSWNSMISAFAQGNCPEDALELFLKMEGANVMP 180
           +  Y  C  L  A  +FEG+   +  +VSW +++SA+AQ   P +ALE+F +M   +V P
Sbjct: 164 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 223

Query: 181 NSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLF 240
           + V +V VL+A     DL+ GR + + + +  + ++  L  ++  MY KCG +  A+ LF
Sbjct: 224 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 283

Query: 241 DEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALA 300
           D+M   ++  W  M+ GYAK                               NG  +EA+ 
Sbjct: 284 DKMKSPNLILWNAMISGYAK-------------------------------NGYAREAID 343

Query: 301 TFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMY 360
            F+E+ ++K  +PD +++ S++SACAQ+G+++    ++ Y+ R     +  + ++LIDM+
Sbjct: 344 MFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 403

Query: 361 AKCGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFT 420
           AKCG++E A  VF    ++DV VWSAMI G G+HGR + AI L+  M+   V PNDVTF 
Sbjct: 404 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 463

Query: 421 NLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPT 480
            LL AC+H+G+V EG   F+ M   + + P  +HYAC++D+LGRAG L++A E+I  MP 
Sbjct: 464 GLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 523

Query: 481 TPSASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSEL 540
            P  +VWGALL AC  H +VEL E A+ QL  ++P N G  + LSN+YA    WD+V+E+
Sbjct: 524 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 583

Query: 541 RKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNK 600
           R  M++  L K+ GCS VEV G +  F VGD SHP   +I  +++ I ++LK  G+  NK
Sbjct: 584 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 643

Query: 601 SHLLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISR 660
              L  + +++ +E  L  HSE++AIA+GLIS     P+R+ KNLR C +CH   KLIS+
Sbjct: 644 DASLHDLNDEEAEE-TLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISK 694

Query: 661 VYNRDILVQDRYRFHHFRDGHCSCMDYW 687
           + +R+I+V+D  RFHHF+DG CSC DYW
Sbjct: 704 LVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of CmoCh13G000610.1 vs. Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 5.7e-145
Identity = 250/659 (37.94%), Postives = 401/659 (60.85%), Query Frame = 1


Query: 28  LEYARDVFDQIPHPNLYTWNTLIRAYASSADPFQSFVIFLALLDECDDLPNNFTFPFVIK 87
           L+ AR VFD++   N+ +W ++I  YA       +  +F  ++ + +  PN+ T   VI 
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244

Query: 88  AASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNMAERLFEGISCKDVVS 147
           A ++L+    G  V+       + ++  ++++LV  Y  C  +++A+RLF+     ++  
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304

Query: 148 WNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIE 207
            N+M S + +     +AL +F  M  + V P+ ++M+  +S+C++  ++ +G+    Y+ 
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364

Query: 208 RKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARK 267
           R        +CNA++DMY KC     A ++FD M  + V +W +++ GY + G+ +AA +
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424

Query: 268 VFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLG 327
            F+ MP K I +WN +IS   +    +EA+  F  +Q  +    D VT++S  SAC  LG
Sbjct: 425 TFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484

Query: 328 AIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFYAVEEKDVYVWSAMIA 387
           A+DL  WI+ YI++ GI L+  L T+L+DM+++CG  E A+ +F ++  +DV  W+A I 
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544

Query: 388 GLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGVV 447
            + M G  + AIELF  M E  +KP+ V F   L ACSH GLV +G+ +F+ M  ++GV 
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVS 604

Query: 448 PGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASDQ 507
           P   HY CMVD+LGRAG LEEA++LI +MP  P+  +W +LL AC +  NVE+A  A+++
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664

Query: 508 LLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFLV 567
           +  L P   G+ +LLSNVYA  GRW+ ++++R  M++  L+K PG SS+++ G  HEF  
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724

Query: 568 GDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHSEKLAIAFG 627
           GD SHP   +I + LDE++ +   +G+ P+ S++L  ++E + K   LS HSEKLA+A+G
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKE-KIFMLSRHSEKLAMAYG 784

Query: 628 LISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGHCSCMDYW 687
           LIS      IR+VKNLR+C DCH  AK  S+VYNR+I+++D  RFH+ R G CSC D+W
Sbjct: 785 LISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842

[Close]

BLAST of CmoCh13G000610.1 vs. TrEMBL
Match: A0A0A0M0R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G530130 PE=4 SV=1)

HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 612/686 (89.21%), Postives = 650/686 (94.75%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTGLFFDPFSASKL  ASAL S STL+YAR++FDQIP PNLYTWNTLIRAYASS+DPF
Sbjct: 48  MLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPF 107

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           QSFVIFL LLD+C+DLPN FTFPFVIKAASELKASRVG AVHGMAIKLS GMD YILNSL
Sbjct: 108 QSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSL 167

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           VRFYGACGDL+MAERLF+GISCKDVVSWNSMISAFAQGNCPEDALELFLKME  NVMPNS
Sbjct: 168 VRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNS 227

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMVGVLSACAKKLDLEFGRWVCSYIERK I VDLTLCNAMLDMYTKCGS+ DA+KLFDE
Sbjct: 228 VTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDE 287

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPERDVFSWT MLDGYAKMGD++AAR VF+ MPVKEIAAWN LISAYE+NGKPKEALA F
Sbjct: 288 MPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIF 347

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           NELQLSKIAKPDEVTLVS+LSACAQLGAIDLGGWIHVYIKREGI LN HLI+SL+DMYAK
Sbjct: 348 NELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAK 407

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG+LEKALEVFY+VEE+DVYVWSAMIAGLGMHGRGKAAI+LFF+MQEAKVKPN VTFTN+
Sbjct: 408 CGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNV 467

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSHAGLVDEGR  FHEMEPVYGVVP  KHYACMVDILGRAGFLEEAMELINEM TTP
Sbjct: 468 LCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTP 527

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           SASVWGALLGACSLHMNVEL ELASDQLLKLEPRNHGAI+LLSN+YAKTGRW+KVSELRK
Sbjct: 528 SASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRK 587

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
           LMRD+ELKKEPGCSS+E NG VHEFLVGDN+HPLS +IYSKL+EIA KLKSVGYEPNKSH
Sbjct: 588 LMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSH 647

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQLIEEDD+KE ALSLHSEKLAIAFGL++LAPSQPIRVVKNLRICGDCH  AKL+SRVY
Sbjct: 648 LLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVY 707

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +RDIL++DRYRFHHFRDGHCSCMDYW
Sbjct: 708 DRDILLRDRYRFHHFRDGHCSCMDYW 733

[Close]

BLAST of CmoCh13G000610.1 vs. TrEMBL
Match: M5WLC4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001946mg PE=4 SV=1)

HSP 1 Score: 1062.4 bits (2746), Expect = 2.4e-307
Identity = 502/686 (73.18%), Postives = 592/686 (86.30%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTG+ FDP+SASKLI ASAL S S+L+YAR VFDQIP PN+YTWNTLIRAYASS+DP 
Sbjct: 53  MLRTGVLFDPYSASKLITASALSSFSSLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPA 112

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           +S ++FL +LD C + P+ +T+PF IKAASEL+A +VGR  HGMAIK SLG D YILNSL
Sbjct: 113 ESILVFLDMLDHCSECPDKYTYPFAIKAASELRALQVGRGFHGMAIKASLGSDIYILNSL 172

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           V FYG+CGDL++A R+F     KDVVSWNSMI+ FAQGNCP++ALELF +ME  NV PN 
Sbjct: 173 VHFYGSCGDLDLARRVFMKTPKKDVVSWNSMITVFAQGNCPQEALELFKEMEAENVKPND 232

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMV VLSACAKK+DLEFGRWVCS+I+R EI  +LTL NAMLDMY KCGS+ DA++LFD 
Sbjct: 233 VTMVSVLSACAKKVDLEFGRWVCSHIQRNEIKENLTLNNAMLDMYVKCGSVDDAKRLFDR 292

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPE+D+ SWTTMLDGYA++G++  A +VF  MP ++IAAWN LIS+YE++GKPKEALA F
Sbjct: 293 MPEKDIVSWTTMLDGYAQLGNYEEAWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVF 352

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           NELQ SK  KPDEVTLVS+L+ACAQLGAIDLGGWIHVYIK++ + LN HL TSLIDMYAK
Sbjct: 353 NELQKSKSPKPDEVTLVSTLAACAQLGAIDLGGWIHVYIKKQVMKLNCHLTTSLIDMYAK 412

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG L+KALEVF +VE +DV+VWSAMIAGL MHG+G+ A+E F KM EAKVKPN VTFTN+
Sbjct: 413 CGDLDKALEVFNSVERRDVFVWSAMIAGLAMHGQGRDALEFFSKMLEAKVKPNAVTFTNV 472

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH GLVDEGR  F++MEPVYGVVPG KHYACMVDILGR+G L+EA+ELI +MP  P
Sbjct: 473 LCACSHTGLVDEGRTFFYQMEPVYGVVPGIKHYACMVDILGRSGNLDEAVELIEKMPIPP 532

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           +ASVWGALLGAC LH NV LAE A   LL+L+PRNHGA +LLSN+YA+TG+WD+VS LRK
Sbjct: 533 TASVWGALLGACKLHGNVVLAEKACSHLLELDPRNHGAYVLLSNIYAETGKWDEVSGLRK 592

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            MRD+ +KKEPGCSS+EVNG VHEFLVGDNSHPL ++IYSKLDE+A +LKS GY PNKSH
Sbjct: 593 HMRDAGIKKEPGCSSIEVNGSVHEFLVGDNSHPLCKEIYSKLDEMALRLKSNGYVPNKSH 652

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQ +EE+D+K+HAL LHSEKLAIAFGLISL+PSQPI+VVKNLR+CGDCH VAKLIS++Y
Sbjct: 653 LLQFVEEEDMKDHALILHSEKLAIAFGLISLSPSQPIQVVKNLRVCGDCHSVAKLISKLY 712

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +R+IL++DRYRFHHFRDGHCSC DYW
Sbjct: 713 DREILLRDRYRFHHFRDGHCSCNDYW 738

[Close]

BLAST of CmoCh13G000610.1 vs. TrEMBL
Match: W9RP57_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022020 PE=4 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 1.1e-304
Identity = 493/686 (71.87%), Postives = 590/686 (86.01%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTGLFFDPFSASKLI   A+ S S+L+YA  VFDQIP PNLYTWNT+IRAYASS+DP 
Sbjct: 54  MLRTGLFFDPFSASKLITVCAMSSFSSLDYAHQVFDQIPKPNLYTWNTIIRAYASSSDPI 113

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           QS V+FL +LD+C + PN +T+PFV+KAASELKASRVGR  HGM +K SL  D +ILNSL
Sbjct: 114 QSIVVFLRMLDQCCESPNKYTYPFVLKAASELKASRVGRGFHGMVMKSSLASDVFILNSL 173

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           V FYG+C DL+ A R+F  I  KDVVSWNSMI AF +G+CP++A +LF +ME  N+ PN 
Sbjct: 174 VHFYGSCDDLDSAYRVFLNIPSKDVVSWNSMIKAFVEGDCPDEAFQLFREMEMENLKPND 233

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           +TMVGVL AC KK D+EFGRW+CSYI+R  I+V+LTL NAMLDMY KCGS+ DA++LFD+
Sbjct: 234 ITMVGVLCACGKKADIEFGRWLCSYIQRNGIAVNLTLNNAMLDMYVKCGSVEDAKELFDK 293

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPERDV SWTTMLDGY +MG ++ A +VF+ MP ++IAAWN LIS+YE+NG PKEAL+ F
Sbjct: 294 MPERDVVSWTTMLDGYTRMGKYDEALRVFEAMPNQDIAAWNVLISSYEQNGMPKEALSVF 353

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           ++LQ+SK AKPDEVTLVSSLSAC+QLG+ID G WIH+YIKR+GI LN HL TSLIDMYAK
Sbjct: 354 HKLQVSKSAKPDEVTLVSSLSACSQLGSIDPGRWIHIYIKRQGIKLNCHLTTSLIDMYAK 413

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG LEKALEVF +VE KDVYVWSAMIAGL MHG G+AAI+LF++M +AKVKPN VTFTN+
Sbjct: 414 CGDLEKALEVFDSVERKDVYVWSAMIAGLAMHGCGRAAIDLFYEMLKAKVKPNAVTFTNI 473

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH GL++EG +LF++MEPVY VVPG KHYACMVD+LGR+G L++++E I +MP  P
Sbjct: 474 LCACSHTGLLEEGTSLFYQMEPVYKVVPGVKHYACMVDMLGRSGRLKDSLEFIEKMPIPP 533

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           +AS+WGALLGAC LH NVELAE A  QLL+L+PRNHGA +LLSN+YA+T +WD+VS LRK
Sbjct: 534 TASIWGALLGACRLHGNVELAEHACGQLLELDPRNHGAYVLLSNIYARTDKWDRVSRLRK 593

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            MRDS +KKEPGCSS+E+NGIVHEFLVGDNSHPL +DIY KLDEIAA LK++GY PNKSH
Sbjct: 594 AMRDSGIKKEPGCSSIEINGIVHEFLVGDNSHPLCKDIYEKLDEIAATLKAIGYVPNKSH 653

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQL+EE+D+KE AL+LHSEKLAIAFGLIS APSQPIRVVKNLR+CGDCH VAKL+S+VY
Sbjct: 654 LLQLVEEEDMKEQALNLHSEKLAIAFGLISTAPSQPIRVVKNLRVCGDCHAVAKLVSKVY 713

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
            R+IL++DRYRFHHF+DGHCSC +YW
Sbjct: 714 KREILLRDRYRFHHFKDGHCSCGEYW 739

[Close]

BLAST of CmoCh13G000610.1 vs. TrEMBL
Match: F6GUS6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06420 PE=4 SV=1)

HSP 1 Score: 1045.0 bits (2701), Expect = 3.9e-302
Identity = 496/686 (72.30%), Postives = 583/686 (84.99%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTGLFFDPFSAS+LI A+AL    +L+YA+ VFDQIPHPNLYTWNTLIRAYASS++P 
Sbjct: 58  MLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPH 117

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           QS +IFL +L +  D P+ FTFPF+IKAASEL+    G+A HGM IK+ LG D +ILNSL
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           + FY  CG+L +  R+F  I  +DVVSWNSMI+AF QG CPE+ALELF +ME  NV PN 
Sbjct: 178 IHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNG 237

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           +TMVGVLSACAKK D EFGRWV SYIER  I   LTL NAMLDMYTKCGS+ DA++LFD+
Sbjct: 238 ITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDK 297

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPE+D+ SWTTML GYAK+G+++AA+ +FD MP ++IAAWNALISAYE+ GKPKEAL  F
Sbjct: 298 MPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF 357

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           +ELQLSK AKPDEVTLVS+LSACAQLGA+DLGGWIHVYIK++G+ LN HL TSLIDMY K
Sbjct: 358 HELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCK 417

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG L+KAL VF++VE KDV+VWSAMIAGL MHG GK AI LF KMQE KVKPN VTFTN+
Sbjct: 418 CGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNI 477

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH GLV+EGR  F++ME VYGV+PG KHYACMVDILGRAG LEEA+ELI +MP  P
Sbjct: 478 LCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAP 537

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           +ASVWGALLGAC++H NV LAE A  QL++LEP NHGA +LLSN+YAK G+WD+VS LRK
Sbjct: 538 AASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRK 597

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
           LMRD  LKKEPGCSS+EV+GIVHEFLVGDNSHP ++ IY+KLDEI A+L+++GY PNKSH
Sbjct: 598 LMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSH 657

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQL+EE+DVKE AL LHSEKLAIAFGLIS   SQPIR+VKNLR+CGDCH VAKL+S++Y
Sbjct: 658 LLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLY 717

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +R+IL++DRYRFHHFR+GHCSCMDYW
Sbjct: 718 DREILLRDRYRFHHFREGHCSCMDYW 743

[Close]

BLAST of CmoCh13G000610.1 vs. TrEMBL
Match: B9HP52_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0009s04930g PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 3.7e-292
Identity = 476/686 (69.39%), Postives = 573/686 (83.53%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTGLFFDP SA+KL  A AL S S+L+YA  VFDQIP PNLYTWNTLIRA+ASS  P 
Sbjct: 53  MLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPI 112

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           Q  ++F+ +L E    PN++TFPFVIKAA+E+ +   G+A+HGM +K S G D +I NSL
Sbjct: 113 QGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSL 172

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           + FY + GDL+ A  +F  I  KD+VSWNSMIS F QG  PE+AL+LF +M+  N  PN 
Sbjct: 173 IHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNR 232

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMVGVLSACAK++DLEFGRW C YIER  I ++L L NAMLDMY KCGS+ DA +LFD+
Sbjct: 233 VTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDK 292

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           M E+D+ SWTTM+DGYAK+GD++AAR+VFD MP ++I AWNALIS+Y++NGKPKEALA F
Sbjct: 293 MEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIF 352

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
            ELQL+K  KP+EVTL S+L+ACAQLGA+DLGGWIHVYIK++GI LN H+ TSLIDMY+K
Sbjct: 353 RELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSK 412

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG LEKALEVFY+VE +DV+VWSAMIAGL MHG G+AAI+LF KMQE KVKPN VTFTNL
Sbjct: 413 CGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNL 472

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH+GLVDEGR  F++M PVYGVVPG+KHYACMVDILGRAG LEEA+ELI +MP  P
Sbjct: 473 LCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVP 532

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           SASVWGALLGAC ++ NVELAE+A  +LL+ +  NHGA +LLSN+YAK G+WD VS LR+
Sbjct: 533 SASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQ 592

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            M+ S L+KEPGCSS+EVNGI+HEFLVGDNSHPLS +IYSKLDEI A++KS GY  ++SH
Sbjct: 593 HMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESH 652

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQ +EE+ +KEHAL+LHSEKLAIA+GLI + PSQPIR+VKNLR+CGDCH VAKLIS++Y
Sbjct: 653 LLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLY 712

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           NRDIL++DRYRFHHF  G+CSCMDYW
Sbjct: 713 NRDILLRDRYRFHHFSGGNCSCMDYW 738

[Close]

BLAST of CmoCh13G000610.1 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 906.7 bits (2342), Expect = 8.4e-264
Identity = 426/686 (62.10%), Postives = 543/686 (79.15%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           M+RTG F DP+SASKL A +AL S ++LEYAR VFD+IP PN + WNTLIRAYAS  DP 
Sbjct: 53  MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPV 112

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
            S   FL ++ E    PN +TFPF+IKAA+E+ +  +G+++HGMA+K ++G D ++ NSL
Sbjct: 113 LSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSL 172

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           +  Y +CGDL+ A ++F  I  KDVVSWNSMI+ F Q   P+ ALELF KME  +V  + 
Sbjct: 173 IHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASH 232

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMVGVLSACAK  +LEFGR VCSYIE   ++V+LTL NAMLDMYTKCGSI DA++LFD 
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           M E+D  +WTTMLDGYA   D+ AAR+V + MP K+I AWNALISAYE+NGKP EAL  F
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           +ELQL K  K +++TLVS+LSACAQ+GA++LG WIH YIK+ GI +N H+ ++LI MY+K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG LEK+ EVF +VE++DV+VWSAMI GL MHG G  A+++F+KMQEA VKPN VTFTN+
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
            CACSH GLVDE  +LFH+ME  YG+VP  KHYAC+VD+LGR+G+LE+A++ I  MP  P
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           S SVWGALLGAC +H N+ LAE+A  +LL+LEPRN GA +LLSN+YAK G+W+ VSELRK
Sbjct: 533 STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRK 592

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            MR + LKKEPGCSS+E++G++HEFL GDN+HP+S  +Y KL E+  KLKS GYEP  S 
Sbjct: 593 HMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQ 652

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           +LQ+IEE+++KE +L+LHSEKLAI +GLIS    + IRV+KNLR+CGDCH VAKLIS++Y
Sbjct: 653 VLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLY 712

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +R+I+V+DRYRFHHFR+G CSC D+W
Sbjct: 713 DREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]

BLAST of CmoCh13G000610.1 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 590.5 bits (1521), Expect = 1.3e-168
Identity = 303/720 (42.08%), Postives = 436/720 (60.56%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSS-STLEYARDVFDQIPHPNLYTWNTLIRAYASSADP 60
           M++ GL    ++ SKLI    L      L YA  VF  I  PNL  WNT+ R +A S+DP
Sbjct: 56  MIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDP 115

Query: 61  FQSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYI--- 120
             +  +++ ++     LPN++TFPFV+K+ ++ KA + G+ +HG  +KL   +D Y+   
Sbjct: 116 VSALKLYVCMIS-LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTS 175

Query: 121 ----------------------------LNSLVRFYGACGDLNMAERLFEGISCKDVVSW 180
                                         +L++ Y + G +  A++LF+ I  KDVVSW
Sbjct: 176 LISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSW 235

Query: 181 NSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIER 240
           N+MIS +A+    ++ALELF  M   NV P+  TMV V+SACA+   +E GR V  +I+ 
Sbjct: 236 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 295

Query: 241 KEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTMLDGYAKMGDFNAARKV 300
                +L + NA++D+Y+KCG +  A  LF+ +P +DV SW T++ GY  M  +      
Sbjct: 296 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY------ 355

Query: 301 FDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDEVTLVSSLSACAQLGA 360
                                    KEAL  F E+ L     P++VT++S L ACA LGA
Sbjct: 356 -------------------------KEALLLFQEM-LRSGETPNDVTMLSILPACAHLGA 415

Query: 361 IDLGGWIHVYIKR--EGINLNGHLITSLIDMYAKCGALEKALEVFYAVEEKDVYVWSAMI 420
           ID+G WIHVYI +  +G+     L TSLIDMYAKCG +E A +VF ++  K +  W+AMI
Sbjct: 416 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 475

Query: 421 AGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALFHEMEPVYGV 480
            G  MHGR  A+ +LF +M++  ++P+D+TF  LL ACSH+G++D GR +F  M   Y +
Sbjct: 476 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 535

Query: 481 VPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMNVELAELASD 540
            P  +HY CM+D+LG +G  +EA E+IN M   P   +W +LL AC +H NVEL E  ++
Sbjct: 536 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 595

Query: 541 QLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVEVNGIVHEFL 600
            L+K+EP N G+ +LLSN+YA  GRW++V++ R L+ D  +KK PGCSS+E++ +VHEF+
Sbjct: 596 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 655

Query: 601 VGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSLHSEKLAIAF 660
           +GD  HP +R+IY  L+E+   L+  G+ P+ S +LQ +EE + KE AL  HSEKLAIAF
Sbjct: 656 IGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE-EWKEGALRHHSEKLAIAF 715

Query: 661 GLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRDGHCSCMDYW 687
           GLIS  P   + +VKNLR+C +CHE  KLIS++Y R+I+ +DR RFHHFRDG CSC DYW
Sbjct: 716 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of CmoCh13G000610.1 vs. TAIR10
Match: AT4G14820.1 (AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 537.7 bits (1384), Expect = 1.0e-152
Identity = 261/680 (38.38%), Postives = 416/680 (61.18%), Query Frame = 1


Query: 14  SKLIAASALKSSSTLEYARDVFDQIPHP-NLYTWNTLIRAYASSADPFQSFVIFLALLDE 73
           S L   S   SS  L YA +VF  IP P     +N  +R  + S++P ++ ++F   +  
Sbjct: 46  SFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEP-RATILFYQRIRH 105

Query: 74  CDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSLVRFYGACGDLNM 133
                + F+F  ++KA S++ A   G  +HG+A K++   D ++    +  Y +CG +N 
Sbjct: 106 VGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINY 165

Query: 134 AERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNSVTMVGVLSACAK 193
           A  +F+ +S +DVV+WN+MI  + +    ++A +LF +M+ +NVMP+ + +  ++SAC +
Sbjct: 166 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 225

Query: 194 KLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDEMPERDVFSWTTM 253
             ++ + R +  ++   ++ +D  L  A++ MY   G +  A + F +M  R++F  T M
Sbjct: 226 TGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAM 285

Query: 254 LDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPD 313
           + GY+K G  + A+ +FD+   K++  W  +ISAY  +  P+EAL  F E+  S I KPD
Sbjct: 286 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI-KPD 345

Query: 314 EVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFY 373
            V++ S +SACA LG +D   W+H  I   G+     +  +LI+MYAKCG L+   +VF 
Sbjct: 346 VVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFE 405

Query: 374 AVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDE 433
            +  ++V  WS+MI  L MHG    A+ LF +M++  V+PN+VTF  +L  CSH+GLV+E
Sbjct: 406 KMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEE 465

Query: 434 GRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGAC 493
           G+ +F  M   Y + P  +HY CMVD+ GRA  L EA+E+I  MP   +  +WG+L+ AC
Sbjct: 466 GKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSAC 525

Query: 494 SLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPG 553
            +H  +EL + A+ ++L+LEP + GA++L+SN+YA+  RW+ V  +R++M +  + KE G
Sbjct: 526 RIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKG 585

Query: 554 CSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKE 613
            S ++ NG  HEFL+GD  H  S +IY+KLDE+ +KLK  GY P+   +L  +EE++ K+
Sbjct: 586 LSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKD 645

Query: 614 HALSLHSEKLAIAFGLISLAPSQP------IRVVKNLRICGDCHEVAKLISRVYNRDILV 673
             L  HSEKLA+ FGL++    +       IR+VKNLR+C DCH   KL+S+VY R+I+V
Sbjct: 646 LVL-WHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIV 705

Query: 674 QDRYRFHHFRDGHCSCMDYW 687
           +DR RFH +++G CSC DYW
Sbjct: 706 RDRTRFHCYKNGLCSCRDYW 722

[Close]

BLAST of CmoCh13G000610.1 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 517.3 bits (1331), Expect = 1.4e-146
Identity = 269/688 (39.10%), Postives = 410/688 (59.59%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           +L  GL F  F  +KLI AS+  S   + +AR VFD +P P ++ WN +IR Y+ + + F
Sbjct: 44  LLVLGLQFSGFLITKLIHASS--SFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN-NHF 103

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           Q  ++  + +      P++FTFP ++KA S L   ++GR VH    +L    D ++ N L
Sbjct: 104 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 163

Query: 121 VRFYGACGDLNMAERLFEGISCKD--VVSWNSMISAFAQGNCPEDALELFLKMEGANVMP 180
           +  Y  C  L  A  +FEG+   +  +VSW +++SA+AQ   P +ALE+F +M   +V P
Sbjct: 164 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 223

Query: 181 NSVTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLF 240
           + V +V VL+A     DL+ GR + + + +  + ++  L  ++  MY KCG +  A+ LF
Sbjct: 224 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 283

Query: 241 DEMPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALA 300
           D+M   ++  W  M+ GYAK                               NG  +EA+ 
Sbjct: 284 DKMKSPNLILWNAMISGYAK-------------------------------NGYAREAID 343

Query: 301 TFNELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMY 360
            F+E+ ++K  +PD +++ S++SACAQ+G+++    ++ Y+ R     +  + ++LIDM+
Sbjct: 344 MFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 403

Query: 361 AKCGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFT 420
           AKCG++E A  VF    ++DV VWSAMI G G+HGR + AI L+  M+   V PNDVTF 
Sbjct: 404 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 463

Query: 421 NLLCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPT 480
            LL AC+H+G+V EG   F+ M   + + P  +HYAC++D+LGRAG L++A E+I  MP 
Sbjct: 464 GLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 523

Query: 481 TPSASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSEL 540
            P  +VWGALL AC  H +VEL E A+ QL  ++P N G  + LSN+YA    WD+V+E+
Sbjct: 524 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 583

Query: 541 RKLMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNK 600
           R  M++  L K+ GCS VEV G +  F VGD SHP   +I  +++ I ++LK  G+  NK
Sbjct: 584 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK 643

Query: 601 SHLLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISR 660
              L  + +++ +E  L  HSE++AIA+GLIS     P+R+ KNLR C +CH   KLIS+
Sbjct: 644 DASLHDLNDEEAEE-TLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISK 694

Query: 661 VYNRDILVQDRYRFHHFRDGHCSCMDYW 687
           + +R+I+V+D  RFHHF+DG CSC DYW
Sbjct: 704 LVDREIVVRDTNRFHHFKDGVCSCGDYW 694

[Close]

BLAST of CmoCh13G000610.1 vs. TAIR10
Match: AT5G48910.1 (AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 511.9 bits (1317), Expect = 6.0e-145
Identity = 261/609 (42.86%), Postives = 384/609 (63.05%), Query Frame = 1


Query: 101 VHGMAIKLSLGMDQYILNSLVRFYGACG----DLNMAERLFEGISCKDVVSWNSMISAFA 160
           +H + IK     D      ++RF         DL+ A ++F  +  ++  SWN++I  F+
Sbjct: 42  IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101

Query: 161 QGNCPED----ALELFLKMEGAN-VMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKEI 220
           + +  ED    A+ LF +M     V PN  T   VL ACAK   ++ G+ +     +   
Sbjct: 102 ESD--EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 161

Query: 221 SVDLTLCNAMLDMYTKCGSIGDAEKLFDE---------MPER-----DVFSWTTMLDGYA 280
             D  + + ++ MY  CG + DA  LF +         M +R     ++  W  M+DGY 
Sbjct: 162 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 221

Query: 281 KMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATFNELQLSKIAKPDEVTLV 340
           ++GD  AAR +FD+M  + + +WN +IS Y  NG  K+A+  F E++   I +P+ VTLV
Sbjct: 222 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI-RPNYVTLV 281

Query: 341 SSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAKCGALEKALEVFYAVEEK 400
           S L A ++LG+++LG W+H+Y +  GI ++  L ++LIDMY+KCG +EKA+ VF  +  +
Sbjct: 282 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 341

Query: 401 DVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNLLCACSHAGLVDEGRALF 460
           +V  WSAMI G  +HG+   AI+ F KM++A V+P+DV + NLL ACSH GLV+EGR  F
Sbjct: 342 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 401

Query: 461 HEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTPSASVWGALLGACSLHMN 520
            +M  V G+ P  +HY CMVD+LGR+G L+EA E I  MP  P   +W ALLGAC +  N
Sbjct: 402 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 461

Query: 521 VELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRKLMRDSELKKEPGCSSVE 580
           VE+ +  ++ L+ + P + GA + LSN+YA  G W +VSE+R  M++ +++K+PGCS ++
Sbjct: 462 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 521

Query: 581 VNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSHLLQLIEEDDVKEHALSL 640
           ++G++HEF+V D+SHP +++I S L EI+ KL+  GY P  + +L  +EE+D KE+ L  
Sbjct: 522 IDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEED-KENVLHY 581

Query: 641 HSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVYNRDILVQDRYRFHHFRD 687
           HSEK+A AFGLIS +P +PIR+VKNLRIC DCH   KLIS+VY R I V+DR RFHHF+D
Sbjct: 582 HSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQD 641

[Close]

BLAST of CmoCh13G000610.1 vs. NCBI nr
Match: gi|449455158|ref|XP_004145320.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucumis sativus])

HSP 1 Score: 1263.1 bits (3267), Expect = 0.0e+00
Identity = 612/686 (89.21%), Postives = 650/686 (94.75%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTGLFFDPFSASKL  ASAL S STL+YAR++FDQIP PNLYTWNTLIRAYASS+DPF
Sbjct: 48  MLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPF 107

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           QSFVIFL LLD+C+DLPN FTFPFVIKAASELKASRVG AVHGMAIKLS GMD YILNSL
Sbjct: 108 QSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSL 167

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           VRFYGACGDL+MAERLF+GISCKDVVSWNSMISAFAQGNCPEDALELFLKME  NVMPNS
Sbjct: 168 VRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNS 227

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMVGVLSACAKKLDLEFGRWVCSYIERK I VDLTLCNAMLDMYTKCGS+ DA+KLFDE
Sbjct: 228 VTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDE 287

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPERDVFSWT MLDGYAKMGD++AAR VF+ MPVKEIAAWN LISAYE+NGKPKEALA F
Sbjct: 288 MPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIF 347

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           NELQLSKIAKPDEVTLVS+LSACAQLGAIDLGGWIHVYIKREGI LN HLI+SL+DMYAK
Sbjct: 348 NELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAK 407

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG+LEKALEVFY+VEE+DVYVWSAMIAGLGMHGRGKAAI+LFF+MQEAKVKPN VTFTN+
Sbjct: 408 CGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNV 467

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSHAGLVDEGR  FHEMEPVYGVVP  KHYACMVDILGRAGFLEEAMELINEM TTP
Sbjct: 468 LCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTP 527

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           SASVWGALLGACSLHMNVEL ELASDQLLKLEPRNHGAI+LLSN+YAKTGRW+KVSELRK
Sbjct: 528 SASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRK 587

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
           LMRD+ELKKEPGCSS+E NG VHEFLVGDN+HPLS +IYSKL+EIA KLKSVGYEPNKSH
Sbjct: 588 LMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSH 647

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQLIEEDD+KE ALSLHSEKLAIAFGL++LAPSQPIRVVKNLRICGDCH  AKL+SRVY
Sbjct: 648 LLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVY 707

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +RDIL++DRYRFHHFRDGHCSCMDYW
Sbjct: 708 DRDILLRDRYRFHHFRDGHCSCMDYW 733

[Close]

BLAST of CmoCh13G000610.1 vs. NCBI nr
Match: gi|659115085|ref|XP_008457379.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Cucumis melo])

HSP 1 Score: 1258.4 bits (3255), Expect = 0.0e+00
Identity = 612/686 (89.21%), Postives = 648/686 (94.46%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTGLFFDPFSASKL  ASAL S STL+YAR+VFDQIP PNLYTWN LIRAYASS+DPF
Sbjct: 48  MLRTGLFFDPFSASKLFTASALSSFSTLDYARNVFDQIPQPNLYTWNILIRAYASSSDPF 107

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           QSFVIFL LLD+C+DLPNNFTFPFVIKAASELKASRVG AVHGMAIKLS GMD YILNSL
Sbjct: 108 QSFVIFLDLLDKCEDLPNNFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSL 167

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           VRFYGACGDL+MAERLF+GISCKDVVSWNSMISAFAQGNCPEDALELFLKME  NVMPNS
Sbjct: 168 VRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNS 227

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMV VLSACAKKLDLEFGRWVCSYIERK I +DLTL NAMLDMYTKCGS+ DA+KLFDE
Sbjct: 228 VTMVCVLSACAKKLDLEFGRWVCSYIERKGIKMDLTLRNAMLDMYTKCGSVDDAQKLFDE 287

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPERDVFSWT MLDGYAKMGD++AAR VF+ MPVKEIAAWN LISAYE+NGKPKEALA F
Sbjct: 288 MPERDVFSWTIMLDGYAKMGDYDAARGVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIF 347

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           NELQLSKIAKPDEVTLVS+LSACAQLGAIDLGGWIHVYIKREGI+LN HLI+SL+DMYAK
Sbjct: 348 NELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIDLNCHLISSLVDMYAK 407

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CGALEKALEVFY+VEE+DVYVWSAMIAGLGMHGRGKAAI+LFF+MQEAKVKPN VTFTN+
Sbjct: 408 CGALEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNV 467

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH GLVDEGR  FHEMEPVYGVVP TKHYACMVDILGRAGFLEEAMELINEM  TP
Sbjct: 468 LCACSHTGLVDEGRVFFHEMEPVYGVVPETKHYACMVDILGRAGFLEEAMELINEMSITP 527

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           SASVWGALLGACSLHMNVEL ELASDQLLKLEPRNHGAI+LLSN+YAKTGRW+KVSELRK
Sbjct: 528 SASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRK 587

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
           LMRD+ELKKEPGCSS+EVNG VHEFLVGDN HPLS +IYSKLD+IA KLK VGYEPNKSH
Sbjct: 588 LMRDTELKKEPGCSSIEVNGNVHEFLVGDNLHPLSSNIYSKLDDIATKLKPVGYEPNKSH 647

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQLIEEDD+KE ALSLHSEKLAIAFGL+SLAPSQPIRVVKNLRICGDCHE AKL+SRVY
Sbjct: 648 LLQLIEEDDLKEQALSLHSEKLAIAFGLVSLAPSQPIRVVKNLRICGDCHEFAKLVSRVY 707

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +RDIL++DRYRFHHFRDGHCSCMDYW
Sbjct: 708 DRDILLRDRYRFHHFRDGHCSCMDYW 733

[Close]

BLAST of CmoCh13G000610.1 vs. NCBI nr
Match: gi|595832196|ref|XP_007206426.1| (hypothetical protein PRUPE_ppa001946mg [Prunus persica])

HSP 1 Score: 1062.4 bits (2746), Expect = 3.4e-307
Identity = 502/686 (73.18%), Postives = 592/686 (86.30%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTG+ FDP+SASKLI ASAL S S+L+YAR VFDQIP PN+YTWNTLIRAYASS+DP 
Sbjct: 53  MLRTGVLFDPYSASKLITASALSSFSSLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPA 112

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           +S ++FL +LD C + P+ +T+PF IKAASEL+A +VGR  HGMAIK SLG D YILNSL
Sbjct: 113 ESILVFLDMLDHCSECPDKYTYPFAIKAASELRALQVGRGFHGMAIKASLGSDIYILNSL 172

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           V FYG+CGDL++A R+F     KDVVSWNSMI+ FAQGNCP++ALELF +ME  NV PN 
Sbjct: 173 VHFYGSCGDLDLARRVFMKTPKKDVVSWNSMITVFAQGNCPQEALELFKEMEAENVKPND 232

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMV VLSACAKK+DLEFGRWVCS+I+R EI  +LTL NAMLDMY KCGS+ DA++LFD 
Sbjct: 233 VTMVSVLSACAKKVDLEFGRWVCSHIQRNEIKENLTLNNAMLDMYVKCGSVDDAKRLFDR 292

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPE+D+ SWTTMLDGYA++G++  A +VF  MP ++IAAWN LIS+YE++GKPKEALA F
Sbjct: 293 MPEKDIVSWTTMLDGYAQLGNYEEAWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVF 352

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           NELQ SK  KPDEVTLVS+L+ACAQLGAIDLGGWIHVYIK++ + LN HL TSLIDMYAK
Sbjct: 353 NELQKSKSPKPDEVTLVSTLAACAQLGAIDLGGWIHVYIKKQVMKLNCHLTTSLIDMYAK 412

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG L+KALEVF +VE +DV+VWSAMIAGL MHG+G+ A+E F KM EAKVKPN VTFTN+
Sbjct: 413 CGDLDKALEVFNSVERRDVFVWSAMIAGLAMHGQGRDALEFFSKMLEAKVKPNAVTFTNV 472

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH GLVDEGR  F++MEPVYGVVPG KHYACMVDILGR+G L+EA+ELI +MP  P
Sbjct: 473 LCACSHTGLVDEGRTFFYQMEPVYGVVPGIKHYACMVDILGRSGNLDEAVELIEKMPIPP 532

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           +ASVWGALLGAC LH NV LAE A   LL+L+PRNHGA +LLSN+YA+TG+WD+VS LRK
Sbjct: 533 TASVWGALLGACKLHGNVVLAEKACSHLLELDPRNHGAYVLLSNIYAETGKWDEVSGLRK 592

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            MRD+ +KKEPGCSS+EVNG VHEFLVGDNSHPL ++IYSKLDE+A +LKS GY PNKSH
Sbjct: 593 HMRDAGIKKEPGCSSIEVNGSVHEFLVGDNSHPLCKEIYSKLDEMALRLKSNGYVPNKSH 652

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQ +EE+D+K+HAL LHSEKLAIAFGLISL+PSQPI+VVKNLR+CGDCH VAKLIS++Y
Sbjct: 653 LLQFVEEEDMKDHALILHSEKLAIAFGLISLSPSQPIQVVKNLRVCGDCHSVAKLISKLY 712

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +R+IL++DRYRFHHFRDGHCSC DYW
Sbjct: 713 DREILLRDRYRFHHFRDGHCSCNDYW 738

[Close]

BLAST of CmoCh13G000610.1 vs. NCBI nr
Match: gi|645216337|ref|XP_008220652.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Prunus mume])

HSP 1 Score: 1059.7 bits (2739), Expect = 2.2e-306
Identity = 500/686 (72.89%), Postives = 591/686 (86.15%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTG  FDP+SASKLI ASAL S S+L+YAR VFDQIP PN+YTWNTLIRAYASS+DP 
Sbjct: 53  MLRTGALFDPYSASKLITASALSSFSSLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPA 112

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           +S +IFL +LD C + P+ +T+PF IKAASEL+A +VGR  HGMAIK SLG D YILNSL
Sbjct: 113 ESILIFLEMLDHCSECPDKYTYPFAIKAASELRALQVGRGFHGMAIKASLGSDIYILNSL 172

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           V FYG+CGDL++A R+F     KDVVSWNSMI+ FAQGNCP++ALELF +ME  NV PN 
Sbjct: 173 VHFYGSCGDLDLARRVFVKTPKKDVVSWNSMITVFAQGNCPQEALELFKEMEAENVKPND 232

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           VTMV VLSACAKK+DLEFGRWVCS+I+R EI  +LTL NAMLDMY KCGS+ DA++LFD 
Sbjct: 233 VTMVSVLSACAKKVDLEFGRWVCSHIQRNEIKENLTLNNAMLDMYVKCGSVEDAKRLFDR 292

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           MPE+D+ SWTTMLDGYA++G++  A +VF  MP ++IAAWN LIS+YE++GKPKEALA F
Sbjct: 293 MPEKDIVSWTTMLDGYAQLGNYEEAWRVFAAMPSQDIAAWNVLISSYEQSGKPKEALAVF 352

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
           NELQ SK  KPDEVTLVS+L+ACAQLGAIDLGGWIHVYIK++ + LN HL TSLIDMYAK
Sbjct: 353 NELQKSKSPKPDEVTLVSTLAACAQLGAIDLGGWIHVYIKKQVMKLNCHLTTSLIDMYAK 412

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG L+KALEVF +VE +DV+VWSAMIAGL MHG+G+ A+E F KM EAKVKPN VTFTN+
Sbjct: 413 CGDLDKALEVFNSVERRDVFVWSAMIAGLAMHGQGRDALEFFSKMLEAKVKPNAVTFTNV 472

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH GLVDEGR  F++MEPVYG++PG KHYACMVDILGR+G L+EA+ELI +MP  P
Sbjct: 473 LCACSHTGLVDEGRTFFYQMEPVYGILPGIKHYACMVDILGRSGNLDEAVELIEKMPIPP 532

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           +ASVWGALLGAC LH NV LAE A   LL+L+PRNHGA +LLSN+YA+TG+WD+VS LRK
Sbjct: 533 TASVWGALLGACKLHGNVVLAEKACSHLLELDPRNHGAYVLLSNIYAETGKWDEVSGLRK 592

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            MRD+ +KKEPGCSS+EVNG VHEFLVGDNSHPL ++IYSKLDE+A +LKS GY PNKSH
Sbjct: 593 HMRDAGIKKEPGCSSIEVNGSVHEFLVGDNSHPLCKEIYSKLDEMALRLKSNGYVPNKSH 652

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQ +EE+D+K+HAL LHSEKLAIAFGLISL+PSQPI+VVKNLR+CGDCH VAK+IS++Y
Sbjct: 653 LLQFVEEEDMKDHALILHSEKLAIAFGLISLSPSQPIQVVKNLRVCGDCHSVAKIISKLY 712

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
           +R+IL++DRYRFHHFRDGHCSC DYW
Sbjct: 713 DREILLRDRYRFHHFRDGHCSCNDYW 738

[Close]

BLAST of CmoCh13G000610.1 vs. NCBI nr
Match: gi|1009114528|ref|XP_015873737.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 1055.0 bits (2727), Expect = 5.4e-305
Identity = 498/686 (72.59%), Postives = 587/686 (85.57%), Query Frame = 1


Query: 1   MLRTGLFFDPFSASKLIAASALKSSSTLEYARDVFDQIPHPNLYTWNTLIRAYASSADPF 60
           MLRTGLFFDP+S+SKLI ASAL S S+L+YAR VFDQIP PNLYTWNTLIR YASS++P 
Sbjct: 46  MLRTGLFFDPYSSSKLITASALSSFSSLDYARRVFDQIPQPNLYTWNTLIRGYASSSEPS 105

Query: 61  QSFVIFLALLDECDDLPNNFTFPFVIKAASELKASRVGRAVHGMAIKLSLGMDQYILNSL 120
           QS V+FL +L    +LPN FT+PFVIKAASELK   +G   HGM IK SLG D +ILNSL
Sbjct: 106 QSIVVFLEMLYRGCELPNKFTYPFVIKAASELKDLLIGTGFHGMVIKSSLGSDVFILNSL 165

Query: 121 VRFYGACGDLNMAERLFEGISCKDVVSWNSMISAFAQGNCPEDALELFLKMEGANVMPNS 180
           + FYG+CGDL++A R+F  I  KD+VSWNSMI+AF QGN P    E+F +ME  NV PN 
Sbjct: 166 IHFYGSCGDLDLAYRVFLNIPKKDLVSWNSMITAFVQGNYPNKVFEMFREMELENVKPND 225

Query: 181 VTMVGVLSACAKKLDLEFGRWVCSYIERKEISVDLTLCNAMLDMYTKCGSIGDAEKLFDE 240
           +TM+GVLSACAKK+D+EFGRWVCSYIER EI V+LTL NAMLDMY KCGSI DA++LFD 
Sbjct: 226 ITMLGVLSACAKKVDIEFGRWVCSYIERNEIRVNLTLNNAMLDMYVKCGSIEDAKRLFDN 285

Query: 241 MPERDVFSWTTMLDGYAKMGDFNAARKVFDEMPVKEIAAWNALISAYERNGKPKEALATF 300
           M E+DV SWTTMLDGYA++  ++ A +VF+ MP ++IAAWN LIS+YE+NGKPKEALATF
Sbjct: 286 MQEKDVVSWTTMLDGYAQLEKYDEAHRVFEAMPCQDIAAWNVLISSYEQNGKPKEALATF 345

Query: 301 NELQLSKIAKPDEVTLVSSLSACAQLGAIDLGGWIHVYIKREGINLNGHLITSLIDMYAK 360
            +LQ SK AKPDEVTLVS+LS+CAQLGAIDLG WIHVYIK++GI +N HL TSLIDMYAK
Sbjct: 346 RKLQTSKTAKPDEVTLVSTLSSCAQLGAIDLGRWIHVYIKKQGIKMNCHLTTSLIDMYAK 405

Query: 361 CGALEKALEVFYAVEEKDVYVWSAMIAGLGMHGRGKAAIELFFKMQEAKVKPNDVTFTNL 420
           CG LE+ALEVF +VE KDV+ WSAMIAGL MHGRG+AA++LF +M EAKVKPN VTFTN+
Sbjct: 406 CGELEEALEVFNSVERKDVFNWSAMIAGLAMHGRGRAALDLFSRMLEAKVKPNAVTFTNI 465

Query: 421 LCACSHAGLVDEGRALFHEMEPVYGVVPGTKHYACMVDILGRAGFLEEAMELINEMPTTP 480
           LCACSH GLVDEGR LFH+MEP+YGVVPG KHY CMVDILGR+G L+EAM+ I EMP  P
Sbjct: 466 LCACSHTGLVDEGRNLFHQMEPIYGVVPGLKHYTCMVDILGRSGHLKEAMQFIEEMPIAP 525

Query: 481 SASVWGALLGACSLHMNVELAELASDQLLKLEPRNHGAIILLSNVYAKTGRWDKVSELRK 540
           +ASVWGALL +C LH NVELAE A  QLL+L+P+NHGA +LLSN+YAK+G+WD+VS LRK
Sbjct: 526 NASVWGALLASCRLHGNVELAEKACSQLLELDPKNHGAYVLLSNIYAKSGKWDQVSGLRK 585

Query: 541 LMRDSELKKEPGCSSVEVNGIVHEFLVGDNSHPLSRDIYSKLDEIAAKLKSVGYEPNKSH 600
            MRDS LKKEPGCS +EVNGI+HEFLVGDNSHPLS++IYSKLDE+A +LKSVGY PN+SH
Sbjct: 586 FMRDSGLKKEPGCSLIEVNGIIHEFLVGDNSHPLSKEIYSKLDEVATRLKSVGYAPNESH 645

Query: 601 LLQLIEEDDVKEHALSLHSEKLAIAFGLISLAPSQPIRVVKNLRICGDCHEVAKLISRVY 660
           LLQL+EE+ +KEHAL+LHSEKLAIA+GLI + PSQPIRVVKNLR+CGDCH  AKLISR+Y
Sbjct: 646 LLQLVEEEGMKEHALNLHSEKLAIAYGLIGMGPSQPIRVVKNLRVCGDCHSFAKLISRLY 705

Query: 661 NRDILVQDRYRFHHFRDGHCSCMDYW 687
            R+IL++DRYRFHHF++GHCSCMD+W
Sbjct: 706 EREILLRDRYRFHHFKEGHCSCMDFW 731

The following BLAST results are available for this feature:

BLAST of CmoCh13G000610.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP175_ARATH	1.5e-262	62.10	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
PPR21_ARATH	2.4e-167	42.08	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
PP311_ARATH	1.8e-151	38.38	Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN...	[more]
PP224_ARATH	2.5e-145	39.10	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN...	[more]
PP249_ARATH	5.7e-145	37.94	Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN...	[more]

BLAST of CmoCh13G000610.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0R9_CUCSA	0.0e+00	89.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G530130 PE=4 SV=1	[more]
M5WLC4_PRUPE	2.4e-307	73.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001946mg PE=4 SV=1	[more]
W9RP57_9ROSA	1.1e-304	71.87	Uncharacterized protein OS=Morus notabilis GN=L484_022020 PE=4 SV=1	[more]
F6GUS6_VITVI	3.9e-302	72.30	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g06420 PE=4 SV=...	[more]
B9HP52_POPTR	3.7e-292	69.39	Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP...	[more]

BLAST of CmoCh13G000610.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29760.1	8.4e-264	62.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	1.3e-168	42.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G14820.1	1.0e-152	38.38	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	1.4e-146	39.10	mitochondrial editing factor 22	[more]
AT5G48910.1	6.0e-145	42.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CmoCh13G000610.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455158\|ref\|XP_004145320.1\|	0.0e+00	89.21	PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic ...	[more]
gi\|659115085\|ref\|XP_008457379.1\|	0.0e+00	89.21	PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic ...	[more]
gi\|595832196\|ref\|XP_007206426.1\|	3.4e-307	73.18	hypothetical protein PRUPE_ppa001946mg [Prunus persica]	[more]
gi\|645216337\|ref\|XP_008220652.1\|	2.2e-306	72.89	PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic ...	[more]
gi\|1009114528\|ref\|XP_015873737.1\|	5.4e-305	72.59	PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031425	chloroplast RNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh13G000610	CmoCh13G000610	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000610.1	CmoCh13G000610.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000610.1.CDS.1	CmoCh13G000610.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh13G000610.1.exon.1	CmoCh13G000610.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 44..61 score: 0.59coord: 247..275 score: 3.4E-7coord: 279..305 score: 6.4E-6coord: 117..139 score: 0.68coord: 218..245 score: 2.1E-5coord: 524..545 score: 0.51coord: 453..476 score: 0.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 377..424 score: 2.1E-10coord: 143..192 score: 9.8
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 146..179 score: 1.6E-6coord: 380..413 score: 1.0E-6coord: 247..275 score: 1.6E-7coord: 453..476 score: 0.002coord: 279..312 score: 9.1E-5coord: 415..448 score: 8.9E-5coord: 218..246 score: 1.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 515..549 score: 6.928coord: 144..178 score: 11.718coord: 378..412 score: 10.852coord: 449..479 score: 7.815coord: 214..244 score: 9.953coord: 179..213 score: 5.503coord: 280..310 score: 7.191coord: 42..77 score: 7.224coord: 413..448 score: 8.374coord: 245..279 score: 11.641coord: 347..377 score: 7.783coord: 312..346 score: 6.434coord: 113..143 score:
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 291..421 score: 2.6E-10coord: 489..534 score: 2.6E-10coord: 225..290 score: 7.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 256..300 score: 4.09E-7coord: 464..535 score: 4.0
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..556 score:
None	No IPR available	PANTHER	PTHR24015:SF558	SUBFAMILY NOT NAMED	coord: 1..556 score: