CmoCh12G012840.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh12G012840.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr12 : 11349379 .. 11352646 (+)
Sequence length543
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGAAGAACAATTGATCAGGCGAAGACCTCCTGAATCAATCCAACCAATATCCTCTCTTCCACATCTTCAACAACATCTTCTGCCTCATTCATTGATTCTCGAATCGGCCACCACCAGCGCAAGCCTAAAATTCCGTTTGTCACTCCATTGATTTTTCTGTAATTTCTTAAAGATTCCATGCCGTCACTGGCAGTCGGCGGCGATTCCTCCGGCGAGATCCACAATCTCGATCTCCCTGCATTTGATGTAAGCAAACAACCGACTAATCTTCATTGATTTTTTAATTTGTTGGTCAGGCGAAATAAAACTAGTCAGAGCAAGTTTATGGTTGCAAAATTAATGCAGAATGTTCATACCATTAGCATTAAGACGGAAGAGCTCATTCGCGCGATTGGAAGGCGACGGATTGCTCGACATCGGACATTTCGGTGTAGTTCCAGGTTTGGTAACTGATCTTTCATTGTCTATGTACTTCGAGCTTTCTGTTGTGCAGCATGCGTGAATGAGAGAACTTTGGCTATCACTACTGTACTCTGTACGTGGAAAGAATTCATGAAAATTTTGATCTCAACAAAGAAAGCATGCGTAAAATTATACCACGTCTCAGATACTGAGAATAGACAGAAGAACAGCAGCTGATTAAACATATCTAGATAGGACTGAAGAACTTCATCCTTCTTGATTTAGAATTGAAGCCTCAATTATATGTTGTTGACTGAAAATTCGGATGATTATACTTTCTGTGTCATCGACATAATTATTTGTTGTCTTATTCCTGCATCAATAAAGACTTTCTTCCCTCTATTATTAACAAAAACAATAAATGTTGCAAGTTGTATGCATTATTAGAATTTATTTCGGATGACACAGGATCAAAATGTTACATTATGATGTTTATATATCTCTAGACATATAATATTTCTACTCTCAATATTAGTTATGCTAGTTCTAGATTATCTAAGTTCTATCAATAAGCCCATTGAGTTTTTTCCATGCGAATTTCGATGACATTTATTAGTTACTGTAATTGTAGATACTTTTGGATCATTTTGAAACCAGAAATTTTCATATCCTAAATGCTTTAAGTTCATATAAACTAAAATATTCTGAGATTTTAATGCAGATCTTAGTTTGACTTGCATTTGTAATCATAGCAAACTATGAGTTTTCTGCTCTGACTGTTCTAGTTATATTACTTAGGAGATTTACCACATGTTTGATGTCTGGAGCTACCGCCTTGTTCCTTCATATTTGGTAAAGAGGCTGGAGAATATGTTTTATCAGGCTTCTTAACATTGCTTTTGCTACCAAAGTTAATGGCCTGCAGAAAGAAATTTTCATTAGTTTTGATTTCCCATGCCGAAATTCTCGTACTCATCTCCAATCAAATTTTCCGAGCTTGTAACTTATCAATTTCTGCATTCATGCTGCAGTACCTTCTTCCAAAATAAGAACAGGAAACAGGAAAAGGCATATGAAAGCATGGGAATATAAGAAACTCTATAAATAGTTTTTGGACTTACCTCTGGTTTCTGTACCGAAACCTCGTTGATGACCTTTTCTGCAATTGCTTGATTCGTGCTGAATCGGCTGCACTCAAAGGCAGTGTTTGATGTAGGAGTTGAGTCCCGAGGGACATGTTCCCTCGTAGCATTTAGTTTACGTTGAAGTTTGCCAAGGGATCCATGCACTTGATCTTGAAACTTTGGTACAATCTTAGCTTGCGAAAGTGGATTTTTTCTAGCTACAATGTCTTTCTGTGATTCAAGAACTTTCCTATCAATTGCTTCTTTCCTCGGGCGATTTTGATCGAGTGGAATATGTGAAATCCTTTTTTTGGGCTTGATGACATTGATACATTCTTTTGGATTCCTATTATGTTCTTTTGGGTTTTGAGCTTCTTTTCTGTGATTTATCCTTGAGATTGCAGTCTCTTCTGCCCCTATTGACCCAAGCACTCTTTTGGAACTTAATACTTCTGCCTTATTGCTATTCCTTTGCTGAGGATGCTTTTCTTTCATCTTCAGTTTCATGAACTTTTTTTTGTTCAAAGCTTCGTCTTCCTCGAATACCCGTGCTTGTCTTTCCTCCCATTCAGCTTGTGAAACACGAAGAGGTTTTAGAAGTACAATTGGCGGGGCAGTATGGGTTAACTCTTCTCTTGAATGCCTGTAGCTGGAATAATTGAAATAGTCATCCACTTCCTTTGCAGAATGCTTAAGAATGCCTTTGAATTGATGAGTGTCAAGATTTGATTCTGTGGTTCTCTTCCCTATCTTGTGTGTAACTGCCTTCGACTTCTTTGTCTCGACCATTTCATTGCTAAACTTAGACCTTTGGAGATCTAAAATCTTTTCACTAGGTAAATGTCTGCCTAAAGTTTCATGCATTTGCTTTGGTTGAAGTTCTAGATCCTTTCGCTTTGCTATCAGATTTTTTCCACGACCCTTCTTTGTGGGATTTCGAGCAGTGTTGTACACCATTGAAGATTGTCCAGAGCTTGTGGATGCAAAATCTGAAGCTGAGTTTTCCATACCACTTTCAGGAAAACCGATTCGTTCGGCCATATTCGTTGTATTTGAAAATAAGAGTTGTCTAGCAAGGCGATCTCGGATCGTCTTCTTGAGTTCCTTAGCACCATCTCCATAAGAATAATCAGCCGAAAGCCGAGGTTTATGAAGTTCATTTCGGTTGAAACATGTTCTCTCCATGCCCATGTTTCCACTTGTCCTCTTTTCTATGCATTCATTTTTCTTCACCTGAGTCATGTACCTTGAAGTTTCCTGCAATTTCCCTAGAATGACCAAGGACTGCTGCAAATCAATAGCTCCTTCAAACAAATCTCTTGCAATTTGTTCAGATTGGCTATTATATTTCATACCATTGGACCACAAAACAATTGTCCGGTTCAGCTTCTGAGCTTCTCTGGACACTTCCATGAGTTGTGATGATGATGAACTGCTCAATTCATCCACAACTTCTTTGATGGTTGTTTCCTCTCTTGGTAACTTACAGTCCGAAAATTCGTAAAAGTTCTTCCTAGCTGTCCGGCTTTTGGTTTTCTTATCCATTTCTGATAGAACAACTTTCTTTATTCTGATACTGCTTTTATCAACTATGCCTTTCGGATCGTTACAAGTTATAAATGATCTGTAAATTCTTGATCTTAGACTTTCCTGAGGCATATCGTATTGATTGAGATCTCATATACATTGGCAGAGCATAATCAGCAGCTCCCGTTAGTAACTTTTATCCGTTGA

mRNA sequence

ATGGAAGATGAAGAACAATTGATCAGGCGAAGACCTCCTGAATCAATCCAACCAATATCCTCTCTTCCACATCTTCAACAACATCTTCTGCCTCATTCATTGATTCTCGAATCGGCCACCACCAGCGCAAGCCTAAAATTCCATTCCATGCCGTCACTGGCAGTCGGCGGCGATTCCTCCGGCGAGATCCACAATCTCGATCTCCCTGCATTTGATAATGTTCATACCATTAGCATTAAGACGGAAGAGCTCATTCGCGCGATTGGAAGGCGACGGATTGCTCGACATCGGACATTTCGGTGTAGTTCCAGATTTTTTCCACGACCCTTCTTTGTGGGATTTCGAGCAGTGTTGTACACCATTGAAGATTGTCCAGAGCTTGTGGATGCAAAATCTGAAGCTGAGTTTTCCATACCACTTTCAGGAAAACCGATTCGTTCGGCCATATTCGTTACTTTCCTGAGGCATATCGTATTGATTGAGATCTCATATACATTGGCAGAGCATAATCAGCAGCTCCCGTTAGTAACTTTTATCCGTTGA

Coding sequence (CDS)

ATGGAAGATGAAGAACAATTGATCAGGCGAAGACCTCCTGAATCAATCCAACCAATATCCTCTCTTCCACATCTTCAACAACATCTTCTGCCTCATTCATTGATTCTCGAATCGGCCACCACCAGCGCAAGCCTAAAATTCCATTCCATGCCGTCACTGGCAGTCGGCGGCGATTCCTCCGGCGAGATCCACAATCTCGATCTCCCTGCATTTGATAATGTTCATACCATTAGCATTAAGACGGAAGAGCTCATTCGCGCGATTGGAAGGCGACGGATTGCTCGACATCGGACATTTCGGTGTAGTTCCAGATTTTTTCCACGACCCTTCTTTGTGGGATTTCGAGCAGTGTTGTACACCATTGAAGATTGTCCAGAGCTTGTGGATGCAAAATCTGAAGCTGAGTTTTCCATACCACTTTCAGGAAAACCGATTCGTTCGGCCATATTCGTTACTTTCCTGAGGCATATCGTATTGATTGAGATCTCATATACATTGGCAGAGCATAATCAGCAGCTCCCGTTAGTAACTTTTATCCGTTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh12G012840CmoCh12G012840gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh12G012840.1CmoCh12G012840.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh12G012840.1.exon.1CmoCh12G012840.1.exon.1exon
CmoCh12G012840.1.exon.2CmoCh12G012840.1.exon.2exon
CmoCh12G012840.1.exon.3CmoCh12G012840.1.exon.3exon
CmoCh12G012840.1.exon.4CmoCh12G012840.1.exon.4exon
CmoCh12G012840.1.exon.5CmoCh12G012840.1.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh12G012840.1.CDS.1CmoCh12G012840.1.CDS.1CDS
CmoCh12G012840.1.CDS.2CmoCh12G012840.1.CDS.2CDS
CmoCh12G012840.1.CDS.3CmoCh12G012840.1.CDS.3CDS
CmoCh12G012840.1.CDS.4CmoCh12G012840.1.CDS.4CDS
CmoCh12G012840.1.CDS.5CmoCh12G012840.1.CDS.5CDS