CmoCh12G004700.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G004700.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	B3 domain-containing protein
Location	Cmo_Chr12 : 2875151 .. 2877172 (+)
Sequence length	760

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAGAAGAAGAAGAAGAAGAGACCATGGGGATCGCTAATCTCTCATACGAGGAATGCCGCCATAAGAGACTCGAAGAAAACAAGAAGCGGATGGAAGCCCTAAATCTGCCTTTGCTTTCTCAAGCTCTCCTCCATTCTTCCCCTTCCAAATCCTCGCCTGTAATTCCATTTCATATTTCAATATCTCCTATTACTTACGCTAACTTTGTCAATGGATTGTTGTATTGTGCTTATTTTGCTACTTGACCGATTTCACAGAGTAAGCTCGCCAAGCCTCGCGTGACGCAGAAACAACTCGTAGTTGTGAGGAGATCCAGTCGCATAGCGAAACAATCCGCCCCCGTTTACGCCGAAGTAAGTCATTCTTGCCTTATTTTGCTTGCATTTGGATGATGAGCTCAAAGTTCACTGCTGCTTGCATTGGAGAGAGATTTTAGTCCTCGAAGAAACCTCTTCTTCATTGGTTCTGTTTCCTTTTCTTTTTTGACAGGTTGTTGTAAATCGTGTGGTGATTCCTAGAAGGTAGATGAATTAAAAAACAATTAGGATAAATGACTTTCCGTATGGTTGAATCATGTAGTATTGTTACCAATGTTCATTGTTTGGGGATTATAGGATCTCCAATGCTACAGATCTTTCAAATCGAGTTTATTCTTCGGATGAAGCAAGAAAAAATGCCTTTGAAAGAGCTGAGCGATTACAATCTGGATTAGAGACGAATTATCCCAACTTTATAAGGTCGATGCTTCCATCTCATGTTAGTGGTGGATTCTGGCTGGTAAGCTATTTGTTAAGCATATACGATCTTCTTCTGTCCCTTTCTGTTAAGCTTGATGAACTGGATGTGTGATATACTTTTATATGATATTTAATCAAAAAGTAGTTGTAAACGCAGGGCCTTCCTTCTCATTTCTGCAAGACGCACCTTCCAAATCGCGATGGAATTGTGACATTAATAGATGAAGATGGAGATGAATATCCAACAGTATATTTAGCACGAAAAACAGGACTCAGTGGCGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCTGATGGGGATGCTGTGATTTTTCAATTCATTAAACCTACAACGTGCAAGGTGATTGTTTTCCCTTCAAGTTAGTATGTATTTTTCTGAAAACTGTTTAAATGAAATGGTTCATCGTGGGAGCAAAATAAGTCATACCAAGTCTTAAAGAAAACTCATCCGATCCAAGTATGTTTTGCTTTAAGAAAACTTTGTTTGATTCTTTGGAAATTCTCAACTCCCAAGTCACAAATGATCAAAAAATTTGTAATCACTCGTTTCATGAGCTCAAGCTCAAGTCCAACATTAGCATATATTGTCCGCTTTAGCCTTTCCCTTATGGGTTTCCTCTCAAAATTTTAAAACGCATATGTGAGGGAGAGGTTTCCATGCCTTCATAAGGAATGTTTTGTTCTCTCTACAACCGATGTGGGATCTCACAATCCTTGGTTGGAGAGGAGAACGAAACATTCCGGGTGTGGAAATCTCTCCCTAACAGACACGTTTTAAAAACCTTGAGATAAAGCCCAGAAAGAAAAGCCCAAAACAGATAATATCGGATGGCGATGGATTTTGGCGATTATAAAACACAAGTTTCATTTTTCCCCTACAAGTTCATAGATTTTTCCTATTACTTCTGTTTCAGGTGTACATCTTTAGAGCGAATAGTTCCAGAAAAGATAGCAATTCTAACAGTAGCTAAATGACTGACATTTTCATCCCAACTCAGGTAATCTCTAAACAAAATCCCTTGCTAACACACCCATTTGAGTTCCCCATCAAAAACTAGAATTCTTTTTCTCCTTATGTATTGCTGCAATTTGCTTGAACTTTTTGAACCTAGGAAGAGCAAGCCTCCCTCTGATCTGGGTTGGTCCCTGTTCTTTTACTCATGTTTAAAACCACAATCTCCTGCTGGTTATTCTAAATTATTAAGTGCCATTATTCATTACAGGCAAGATGTTGCCGGGTGGAACGTGCACATACATAA

mRNA sequence

CGAAGAAGAAGAAGAAGAAGAGACCATGGGGATCGCTAATCTCTCATACGAGGAATGCCGCCATAAGAGACTCGAAGAAAACAAGAAGCGGATGGAAGCCCTAAATCTGCCTTTGCTTTCTCAAGCTCTCCTCCATTCTTCCCCTTCCAAATCCTCGCCTAGTAAGCTCGCCAAGCCTCGCGTGACGCAGAAACAACTCGTAGTTGTGAGGAGATCCAGTCGCATAGCGAAACAATCCGCCCCCGTTTACGCCGAAGTTGTTGTAAATCGTGTGGTGATTCCTAGAAGGATCTCCAATGCTACAGATCTTTCAAATCGAGTTTATTCTTCGGATGAAGCAAGAAAAAATGCCTTTGAAAGAGCTGAGCGATTACAATCTGGATTAGAGACGAATTATCCCAACTTTATAAGGTCGATGCTTCCATCTCATGTTAGTGGTGGATTCTGGCTGGTAAGCTATTTGTTAAGCATATACGATCTTCTTCTGTCCCTTTCTGTTAAGCTTGATGAACTGGATGGCCTTCCTTCTCATTTCTGCAAGACGCACCTTCCAAATCGCGATGGAATTGTGACATTAATAGATGAAGATGGAGATGAATATCCAACAGTATATTTAGCACGAAAAACAGGACTCAGTGGCGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCTGATGGGGATGCTGTGATTTTTCAATTCATTAAACCTACAACGTGCAAGGCAAGATGTTGCCGGGTGGAACGTGCACATACATAA

Coding sequence (CDS)

ATGGGGATCGCTAATCTCTCATACGAGGAATGCCGCCATAAGAGACTCGAAGAAAACAAGAAGCGGATGGAAGCCCTAAATCTGCCTTTGCTTTCTCAAGCTCTCCTCCATTCTTCCCCTTCCAAATCCTCGCCTAGTAAGCTCGCCAAGCCTCGCGTGACGCAGAAACAACTCGTAGTTGTGAGGAGATCCAGTCGCATAGCGAAACAATCCGCCCCCGTTTACGCCGAAGTTGTTGTAAATCGTGTGGTGATTCCTAGAAGGATCTCCAATGCTACAGATCTTTCAAATCGAGTTTATTCTTCGGATGAAGCAAGAAAAAATGCCTTTGAAAGAGCTGAGCGATTACAATCTGGATTAGAGACGAATTATCCCAACTTTATAAGGTCGATGCTTCCATCTCATGTTAGTGGTGGATTCTGGCTGGTAAGCTATTTGTTAAGCATATACGATCTTCTTCTGTCCCTTTCTGTTAAGCTTGATGAACTGGATGGCCTTCCTTCTCATTTCTGCAAGACGCACCTTCCAAATCGCGATGGAATTGTGACATTAATAGATGAAGATGGAGATGAATATCCAACAGTATATTTAGCACGAAAAACAGGACTCAGTGGCGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCTGATGGGGATGCTGTGATTTTTCAATTCATTAAACCTACAACGTGCAAGGCAAGATGTTGCCGGGTGGAACGTGCACATACATAA

Homology

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BLAST of CmoCh12G004700.1 vs. Swiss-Prot
Match: Y3918_ARATH (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana GN=At3g19184 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 9.6e-47
Identity = 116/240 (48.33%), Postives = 145/240 (60.42%), Query Frame = 1


Query: 4   ANLSYEECRHKRLEENKKRMEALNLPLLSQAL-LHSSPSKSSPSKLAKPRVTQ--KQLVV 63
           + LSYE+ R  R+EENKKRM  LNL  L+Q+L + SS S SS    AKPR  +       
Sbjct: 4   SELSYEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPSPAKPRTMRIPVDFSE 63

Query: 64  VRRSSRIAKQSAPVYAEVVVNRVVI-PRRISNATDLSNRVYSSDEARKNAFERAERLQSG 123
           VRRSSR AK   P Y E  +  +   PRR S   DL NRVY+SD+AR  AF+RAE+LQS 
Sbjct: 64  VRRSSR-AKGPPPSYKEFGLEPLERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQSS 123

Query: 124 LETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRD 183
           L++ Y +F + ML SHV+GGFWL                      GLP  FCK H+P RD
Sbjct: 124 LDSEYASFTKPMLQSHVTGGFWL----------------------GLPLPFCKAHMPKRD 183

Query: 184 GIVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRV 240
            I+TL+DE+ +E    YLA+K GLSGGW+GF++ H+L DGDAV+F  I  TT K    RV
Sbjct: 184 VIMTLVDEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRV 220

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BLAST of CmoCh12G004700.1 vs. Swiss-Prot
Match: Y5270_ARATH (B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana GN=At5g42700 PE=2 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 3.7e-46
Identity = 108/232 (46.55%), Postives = 135/232 (58.19%), Query Frame = 1


Query: 8   YEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVVVRRSSRI 67
           YEE R KR+EENKKRMEALNLP LSQ L  +S   S   K + PR  +K++V V+R    
Sbjct: 9   YEEFRLKRVEENKKRMEALNLPKLSQILNSTSVKISPMKKRSIPRTPEKKMVDVKR---- 68

Query: 68  AKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGLETNYPNF 127
                     V + R    R +    DL NRVY S+E R  A  RA + Q  L + YP+F
Sbjct: 69  ----------VHIQR----RGVGKKRDLLNRVYVSEEIRDEAISRANKFQDELGSGYPSF 128

Query: 128 IRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDGIVTLIDE 187
           ++SML SHVSGGFWL                      GLP  FCK+HL   DG++TLIDE
Sbjct: 129 VKSMLQSHVSGGFWL----------------------GLPVQFCKSHLGLHDGVITLIDE 188

Query: 188 DGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRV 240
           +G+EY T+YLARK GLSGGW GF+VAH LA GD ++F+ ++ T  K    RV
Sbjct: 189 EGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRV 200

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BLAST of CmoCh12G004700.1 vs. Swiss-Prot
Match: Y3845_ORYSJ (B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica GN=Os03g0184500 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 9.7e-39
Identity = 99/239 (41.42%), Postives = 133/239 (55.65%), Query Frame = 1


Query: 7   SYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVVV---RR 66
           +YE  R + +EENK++MEALNL  LS A+   +P   SP K  + R+ +  +V     RR
Sbjct: 11  AYEAARERTVEENKRKMEALNLRHLSAAIA-VAPKTPSPMKQKRRRIIEAAVVAPSPPRR 70

Query: 67  SSRIAKQSAPVYAEVVVNRVV----IPRRISNATDLSNRVYSSDEARKNAFERAERLQSG 126
           S R+A      YAEV  +        PR+  ++  L+ R   S EAR  A  +AE L+S 
Sbjct: 71  SRRLANLPEVKYAEVAPDGAERMKRSPRKAIDSIYLATRGSISMEARLEAARKAEELESQ 130

Query: 127 LETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRD 186
           L+  +P+F++ ML SHV  GFWL                      GLP HFC+T+LP  D
Sbjct: 131 LDPEFPSFVKPMLHSHVVRGFWL----------------------GLPRHFCETYLPKHD 190

Query: 187 GIVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCR 239
            IVTL+DE  +++ T YLA K GLSGGW GF++ H L DGDA +FQ +KPTT K    R
Sbjct: 191 AIVTLLDEKDEQFDTNYLAYKNGLSGGWAGFALDHGLLDGDATVFQLVKPTTFKVHIIR 226

[Close]

BLAST of CmoCh12G004700.1 vs. Swiss-Prot
Match: Y6944_ORYSJ (B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica GN=Os06g0194400 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.9e-37
Identity = 97/239 (40.59%), Postives = 133/239 (55.65%), Query Frame = 1


Query: 7   SYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQK----QLVVVR 66
           SYEE R +++E NK+++E L L  LS A+  S+ SK SP K  K +        +   +R
Sbjct: 13  SYEEQRRRQVEANKRKLEELRLHHLSAAVRESA-SKPSPVKQRKRKARALPGAGEDAPLR 72

Query: 67  RSSRIAK-QSAPVYAEVVVNRVVIPRRI--SNATDLSNRVYSSDEARKNAFERAERLQSG 126
           RS R+A     P Y +   +     RR       DLSNRVY++DE R  A   A+ L+  
Sbjct: 73  RSGRVANLPEKPKYRDEFQDFEKRIRRSYGGKRRDLSNRVYATDEQRDYAINAAQELEEE 132

Query: 127 LETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRD 186
           L ++YP F++ ML SHV+GGFWL                       LP+HF + +LP RD
Sbjct: 133 LGSDYPIFVKPMLQSHVTGGFWL----------------------SLPTHFSRKYLPKRD 192

Query: 187 GIVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCR 239
             + L+DE+ DE+ T+YLA K GLSGGW+GFS+AHKL DGD ++FQ I+ T  K    R
Sbjct: 193 ETIRLVDEEDDEFDTLYLANKRGLSGGWRGFSIAHKLVDGDCLVFQLIQRTKFKVYIIR 228

[Close]

BLAST of CmoCh12G004700.1 vs. Swiss-Prot
Match: Y5814_ORYSJ (B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica GN=Os05g0481400 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-30
Identity = 85/237 (35.86%), Postives = 129/237 (54.43%), Query Frame = 1


Query: 4   ANLSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVT-QKQLVVVR 63
           A  +YEE R KR+ EN K +E L +  +S++LL ++  + S     KPR   +     VR
Sbjct: 10  AGAAYEEERRKRVLENLKHLEDLGIKKMSKSLLEAARLQKSTRASPKPRKKFEVGATEVR 69

Query: 64  RSSRIAKQSAPVYAEVVVNRVVIPRRISN------ATDLSNRVYSSDEARKNAFERAERL 123
           RSSR     +       +N  +  RR S         D + RV +S E ++ AF++AERL
Sbjct: 70  RSSRARNSVSYKENFDELNSFLCRRRGSRIRSTEQGRDYTGRV-ASYEQQQRAFKKAERL 129

Query: 124 QSGLETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLP 183
           Q+ L+   P+F+++M+ SHVS  FWL                      GLP+ FCK HLP
Sbjct: 130 QNSLDPENPSFVKTMVRSHVSSCFWL----------------------GLPTRFCKLHLP 189

Query: 184 NRDGIVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCK 234
            ++  + L DE+G E+ +VY+  +TGLSGGW+GF++ H L DGD+++F+  +P   K
Sbjct: 190 PKEYKMVLEDEEGGEFDSVYIGNRTGLSGGWRGFAMHHNLEDGDSLVFELAEPDRFK 223

[Close]

BLAST of CmoCh12G004700.1 vs. TrEMBL
Match: A0A0A0LNH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359980 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 5.8e-99
Identity = 187/238 (78.57%), Postives = 202/238 (84.87%), Query Frame = 1


Query: 1   MGIANLSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVV 60
           MGIANLSYEECR KRLEENKKRMEALNLP+LSQAL+ SSPSKSSPSKL KPRVTQK+LVV
Sbjct: 1   MGIANLSYEECRRKRLEENKKRMEALNLPMLSQALIDSSPSKSSPSKLTKPRVTQKELVV 60

Query: 61  VRRSSRIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGL 120
           VRRSSR+AKQ+APVYAEV++NRVVIPRRIS A DLSNRVY+SDEARK AFERAE+LQSGL
Sbjct: 61  VRRSSRVAKQTAPVYAEVIINRVVIPRRISKARDLSNRVYASDEARKEAFERAEQLQSGL 120

Query: 121 ETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDG 180
           E NYP+FI+SML SHVSGGFWL                      GLPSHFCK  LPNRDG
Sbjct: 121 EPNYPSFIKSMLQSHVSGGFWL----------------------GLPSHFCKNRLPNRDG 180

Query: 181 IVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCR 239
           ++TLIDEDGDEYPT+YLARKTGLSGGWKGF+VAHKLADGDAVIFQFIKPTTCK    R
Sbjct: 181 VMTLIDEDGDEYPTIYLARKTGLSGGWKGFAVAHKLADGDAVIFQFIKPTTCKVHILR 216

[Close]

BLAST of CmoCh12G004700.1 vs. TrEMBL
Match: A0A0A0LKX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359985 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 162/233 (69.53%), Postives = 178/233 (76.39%), Query Frame = 1


Query: 1   MGIANLSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVV 60
           MGI+NLSYEECR KR+EENKKRMEALNLPLLSQALL SSPSKSSP          KQLVV
Sbjct: 1   MGISNLSYEECRQKRVEENKKRMEALNLPLLSQALLDSSPSKSSP----------KQLVV 60

Query: 61  VRRSSRIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGL 120
           VRRSSR+AKQ  PVYAEV+V+RV IPRRIS A D S + Y+SDEARK AFERA  LQSGL
Sbjct: 61  VRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALELQSGL 120

Query: 121 ETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDG 180
           E NYP+ I+SM+ SHVSG FWL                      GLPSHFCKTHLP  DG
Sbjct: 121 EPNYPSCIKSMVRSHVSGCFWL----------------------GLPSHFCKTHLPKNDG 180

Query: 181 IVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCK 234
           ++TLIDEDGDEYP +YLARKTG SGGWKGFS+AHKL+DGDAV+FQ IKPT CK
Sbjct: 181 VMTLIDEDGDEYPIIYLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 201

[Close]

BLAST of CmoCh12G004700.1 vs. TrEMBL
Match: A0A061FCQ7_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_033870 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 8.7e-71
Identity = 146/237 (61.60%), Postives = 174/237 (73.42%), Query Frame = 1


Query: 6   LSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPS-KSSPSKLAKPRVTQKQLVVVRRS 65
           LSYEECR KR+EENKKRMEALNLP LSQAL   +PS K SP K  KPR  +KQLVVVRRS
Sbjct: 8   LSYEECRRKRVEENKKRMEALNLPQLSQAL--RTPSFKPSPRKQVKPRTGEKQLVVVRRS 67

Query: 66  SRIAKQSAPVYAEVVVNRVVIP-RRISNATDLSNRVYSSDEARKNAFERAERLQSGLETN 125
           SR+A + APVY EV+V +V+IP RR+S   DLSNRVY+SDEAR  A E+AE+L+SGLE +
Sbjct: 68  SRVANKPAPVYHEVLVEKVIIPRRRVSKHRDLSNRVYASDEARAEALEKAEKLESGLEPD 127

Query: 126 YPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDGIVT 185
           +P   +SML SHV+GGFWL                      GLP HFCK +LP RD ++T
Sbjct: 128 FPTLTKSMLQSHVTGGFWL----------------------GLPVHFCKRNLPKRDEVMT 187

Query: 186 LIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRVE 241
           LIDE+G EYP +YLARKTGLSGGWKGF+VAHKL DGDA++FQ ++PTT K    RV+
Sbjct: 188 LIDEEGQEYPAIYLARKTGLSGGWKGFAVAHKLVDGDALVFQLVRPTTFKVYIIRVK 220

[Close]

BLAST of CmoCh12G004700.1 vs. TrEMBL
Match: A0A059BSX9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02358 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.6e-70
Identity = 143/234 (61.11%), Postives = 168/234 (71.79%), Query Frame = 1


Query: 7   SYEECRHKRLEENKKRMEALNLPLLSQALLHSSPS-KSSPSKLAKPRVTQKQLVVVRRSS 66
           SYEECR KRLEENKKRMEALNLP LSQ+L  SS S  S+P K +KPR  +K++VVVRRSS
Sbjct: 9   SYEECRRKRLEENKKRMEALNLPQLSQSLRSSSSSPNSTPMKQSKPRTVEKRVVVVRRSS 68

Query: 67  RIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGLETNYP 126
           R+A   APVY EVV++RV +PRRI    D  N VY+S EAR+ A E+AE+LQS LE  YP
Sbjct: 69  RVANMPAPVYREVVIDRVAVPRRIFKRRDPLNLVYASAEAREYALEKAEQLQSTLEPQYP 128

Query: 127 NFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDGIVTLI 186
             ++SMLPSHVSGGFWL                      GL   FCK+ LP  DG++TL+
Sbjct: 129 TLVKSMLPSHVSGGFWL----------------------GLSVQFCKSSLPKNDGVITLV 188

Query: 187 DEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRV 240
           DEDG+E+PT+YLARKTGLSGGWKGFSVAH+L DGDAV+FQ IKPTT K    RV
Sbjct: 189 DEDGEEFPTIYLARKTGLSGGWKGFSVAHELTDGDAVVFQLIKPTTMKVYIIRV 220

[Close]

BLAST of CmoCh12G004700.1 vs. TrEMBL
Match: A0A0D2QCC6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G131600 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 7.4e-70
Identity = 140/235 (59.57%), Postives = 174/235 (74.04%), Query Frame = 1


Query: 6   LSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVVVRRSS 65
           +SYEE R KR+EENKKRMEALNLP LS  LLH+   K SP K  K R  +KQLVVVRRSS
Sbjct: 9   MSYEEIRQKRVEENKKRMEALNLPQLS-TLLHTPSFKPSPRKQMKLRTVEKQLVVVRRSS 68

Query: 66  RIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGLETNYP 125
           R+A + APVY EV+V++V+IPRR+S   DLSNRVY+SDEAR  A E+AE+L+SGL+ ++P
Sbjct: 69  RVANKPAPVYQEVLVDKVMIPRRVSKHRDLSNRVYASDEARAEALEKAEKLESGLDPHFP 128

Query: 126 NFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDGIVTLI 185
            FI+SML SHV+GGFWL                      GLP HFCKT+LP RD ++TL+
Sbjct: 129 VFIKSMLQSHVTGGFWL----------------------GLPVHFCKTNLPKRDEVMTLV 188

Query: 186 DEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRVE 241
           DE+G EYPT+YLA+KTGLSGGWKGF+VAH+L DGDA++FQ ++ TT K    RV+
Sbjct: 189 DEEGHEYPTIYLAKKTGLSGGWKGFAVAHRLVDGDAIVFQLLQRTTFKVYIIRVK 220

[Close]

BLAST of CmoCh12G004700.1 vs. TAIR10
Match: AT3G19184.1 (AT3G19184.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 188.3 bits (477), Expect = 5.4e-48
Identity = 116/240 (48.33%), Postives = 145/240 (60.42%), Query Frame = 1


Query: 4   ANLSYEECRHKRLEENKKRMEALNLPLLSQAL-LHSSPSKSSPSKLAKPRVTQ--KQLVV 63
           + LSYE+ R  R+EENKKRM  LNL  L+Q+L + SS S SS    AKPR  +       
Sbjct: 4   SELSYEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPSPAKPRTMRIPVDFSE 63

Query: 64  VRRSSRIAKQSAPVYAEVVVNRVVI-PRRISNATDLSNRVYSSDEARKNAFERAERLQSG 123
           VRRSSR AK   P Y E  +  +   PRR S   DL NRVY+SD+AR  AF+RAE+LQS 
Sbjct: 64  VRRSSR-AKGPPPSYKEFGLEPLERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQSS 123

Query: 124 LETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRD 183
           L++ Y +F + ML SHV+GGFWL                      GLP  FCK H+P RD
Sbjct: 124 LDSEYASFTKPMLQSHVTGGFWL----------------------GLPLPFCKAHMPKRD 183

Query: 184 GIVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRV 240
            I+TL+DE+ +E    YLA+K GLSGGW+GF++ H+L DGDAV+F  I  TT K    RV
Sbjct: 184 VIMTLVDEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRV 220

[Close]

BLAST of CmoCh12G004700.1 vs. TAIR10
Match: AT5G42700.1 (AT5G42700.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-47
Identity = 108/232 (46.55%), Postives = 135/232 (58.19%), Query Frame = 1


Query: 8   YEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVVVRRSSRI 67
           YEE R KR+EENKKRMEALNLP LSQ L  +S   S   K + PR  +K++V V+R    
Sbjct: 9   YEEFRLKRVEENKKRMEALNLPKLSQILNSTSVKISPMKKRSIPRTPEKKMVDVKR---- 68

Query: 68  AKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGLETNYPNF 127
                     V + R    R +    DL NRVY S+E R  A  RA + Q  L + YP+F
Sbjct: 69  ----------VHIQR----RGVGKKRDLLNRVYVSEEIRDEAISRANKFQDELGSGYPSF 128

Query: 128 IRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDGIVTLIDE 187
           ++SML SHVSGGFWL                      GLP  FCK+HL   DG++TLIDE
Sbjct: 129 VKSMLQSHVSGGFWL----------------------GLPVQFCKSHLGLHDGVITLIDE 188

Query: 188 DGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRV 240
           +G+EY T+YLARK GLSGGW GF+VAH LA GD ++F+ ++ T  K    RV
Sbjct: 189 EGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRV 200

[Close]

BLAST of CmoCh12G004700.1 vs. TAIR10
Match: AT5G58280.1 (AT5G58280.1 AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-25
Identity = 79/241 (32.78%), Postives = 119/241 (49.38%), Query Frame = 1


Query: 6   LSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKL---AKPRVTQKQLVVVR 65
           ++YEE R  RL+EN KR ++  + L    LL     K     L   A+PR          
Sbjct: 3   MAYEEARKLRLQENHKRFQSNFVALPQFQLLQQRNHKPIDKALLATAEPR---------- 62

Query: 66  RSSRIAKQSAPVYAEVVVN--RVVIPRRISNATDLSNRV--------YSSDEARKNAFER 125
           RSSR+    +    +VVV+  R    RR  +++  +  +        ++S E +  AF+ 
Sbjct: 63  RSSRVRTVISSYRDDVVVDTGRTSNLRRSRHSSTWATYISRPLHECKFASYEEKVGAFKA 122

Query: 126 AERLQSGLETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCK 185
           AE+ Q  L++ +P F++SM+ SHV   FWL                      GLPS FC 
Sbjct: 123 AEKFQRSLKSPHPYFVKSMVRSHVYSCFWL----------------------GLPSRFCA 182

Query: 186 THLPNRDGIVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTC 234
            + P     + L DE+G+ Y  VY+ R+ GLSGGWK F++ HKL DGDA++F+ ++P   
Sbjct: 183 DNFPEETMEIELEDEEGEVYEAVYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKF 211

[Close]

BLAST of CmoCh12G004700.1 vs. NCBI nr
Match: gi|659087782|ref|XP_008444633.1| (PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 2.0e-100
Identity = 192/244 (78.69%), Postives = 204/244 (83.61%), Query Frame = 1


Query: 1   MGIANLSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVV 60
           MGIANLSYEECR KRLEENKKRMEALNLPLLSQAL+ SSPSKSSPSKL KPRVTQKQLVV
Sbjct: 1   MGIANLSYEECRRKRLEENKKRMEALNLPLLSQALIDSSPSKSSPSKLTKPRVTQKQLVV 60

Query: 61  VRRSSRIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGL 120
           VRRSSR+AKQSAPVYAEVV+NRVVIPRRIS A DLSNRVY+SD ARK AFERAE+LQSGL
Sbjct: 61  VRRSSRVAKQSAPVYAEVVINRVVIPRRISKARDLSNRVYASDGARKRAFERAEQLQSGL 120

Query: 121 ETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDG 180
           E NYP+FI+SML SHVSGGFWL                      GLPSHFCK HLPNRDG
Sbjct: 121 EPNYPSFIKSMLQSHVSGGFWL----------------------GLPSHFCKIHLPNRDG 180

Query: 181 IVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRVE 240
           ++TLIDEDGDEYPT+YLARKTGLSGGWKGF+VAHKLADGDAVIFQFIKPTTCK    R  
Sbjct: 181 VMTLIDEDGDEYPTIYLARKTGLSGGWKGFAVAHKLADGDAVIFQFIKPTTCKVHILRAA 222

Query: 241 RAHT 245
            + T
Sbjct: 241 NSST 222

[Close]

BLAST of CmoCh12G004700.1 vs. NCBI nr
Match: gi|449470057|ref|XP_004152735.1| (PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 8.3e-99
Identity = 187/238 (78.57%), Postives = 202/238 (84.87%), Query Frame = 1


Query: 1   MGIANLSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVV 60
           MGIANLSYEECR KRLEENKKRMEALNLP+LSQAL+ SSPSKSSPSKL KPRVTQK+LVV
Sbjct: 1   MGIANLSYEECRRKRLEENKKRMEALNLPMLSQALIDSSPSKSSPSKLTKPRVTQKELVV 60

Query: 61  VRRSSRIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGL 120
           VRRSSR+AKQ+APVYAEV++NRVVIPRRIS A DLSNRVY+SDEARK AFERAE+LQSGL
Sbjct: 61  VRRSSRVAKQTAPVYAEVIINRVVIPRRISKARDLSNRVYASDEARKEAFERAEQLQSGL 120

Query: 121 ETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDG 180
           E NYP+FI+SML SHVSGGFWL                      GLPSHFCK  LPNRDG
Sbjct: 121 EPNYPSFIKSMLQSHVSGGFWL----------------------GLPSHFCKNRLPNRDG 180

Query: 181 IVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCR 239
           ++TLIDEDGDEYPT+YLARKTGLSGGWKGF+VAHKLADGDAVIFQFIKPTTCK    R
Sbjct: 181 VMTLIDEDGDEYPTIYLARKTGLSGGWKGFAVAHKLADGDAVIFQFIKPTTCKVHILR 216

[Close]

BLAST of CmoCh12G004700.1 vs. NCBI nr
Match: gi|700207411|gb|KGN62530.1| (hypothetical protein Csa_2G359985 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 2.7e-81
Identity = 162/233 (69.53%), Postives = 178/233 (76.39%), Query Frame = 1


Query: 1   MGIANLSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSKLAKPRVTQKQLVV 60
           MGI+NLSYEECR KR+EENKKRMEALNLPLLSQALL SSPSKSSP          KQLVV
Sbjct: 1   MGISNLSYEECRQKRVEENKKRMEALNLPLLSQALLDSSPSKSSP----------KQLVV 60

Query: 61  VRRSSRIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGL 120
           VRRSSR+AKQ  PVYAEV+V+RV IPRRIS A D S + Y+SDEARK AFERA  LQSGL
Sbjct: 61  VRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALELQSGL 120

Query: 121 ETNYPNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDG 180
           E NYP+ I+SM+ SHVSG FWL                      GLPSHFCKTHLP  DG
Sbjct: 121 EPNYPSCIKSMVRSHVSGCFWL----------------------GLPSHFCKTHLPKNDG 180

Query: 181 IVTLIDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCK 234
           ++TLIDEDGDEYP +YLARKTG SGGWKGFS+AHKL+DGDAV+FQ IKPT CK
Sbjct: 181 VMTLIDEDGDEYPIIYLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 201

[Close]

BLAST of CmoCh12G004700.1 vs. NCBI nr
Match: gi|1009136289|ref|XP_015885454.1| (PREDICTED: B3 domain-containing protein At5g42700-like [Ziziphus jujuba])

HSP 1 Score: 286.2 bits (731), Expect = 5.4e-74
Identity = 149/235 (63.40%), Postives = 176/235 (74.89%), Query Frame = 1


Query: 6   LSYEECRHKRLEENKKRMEALNLPLLSQALLHSSPSKSSPSK-LAKPRVTQKQLVVVRRS 65
           +SYEECR KRLEENKKRMEALNLP ++Q+L +S   K SP K + KPR  +K++VVVRRS
Sbjct: 8   VSYEECRRKRLEENKKRMEALNLPKIAQSLRNSLTPKPSPMKSVKKPRTLEKEVVVVRRS 67

Query: 66  SRIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGLETNY 125
           SR+A   APVY EVV++RV+IPRRIS   DLSNRVY+SDEAR  A E AE+LQSGLE  Y
Sbjct: 68  SRVANLPAPVYKEVVIDRVLIPRRISKHRDLSNRVYASDEARAAAIEIAEKLQSGLEPQY 127

Query: 126 PNFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDGIVTL 185
           PNFI+SMLPSHV+GGFWL                      GLP HFCK +LP RD ++TL
Sbjct: 128 PNFIKSMLPSHVTGGFWL----------------------GLPVHFCKVNLPKRDEVMTL 187

Query: 186 IDEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRV 240
           IDEDG+EYPT+YLARKTGLSGGWKGFSVAH+L DGDA+IFQ ++P+  K    RV
Sbjct: 188 IDEDGNEYPTIYLARKTGLSGGWKGFSVAHELVDGDALIFQLVRPSAFKVYIVRV 220

[Close]

BLAST of CmoCh12G004700.1 vs. NCBI nr
Match: gi|702371665|ref|XP_010061764.1| (PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 276.9 bits (707), Expect = 3.3e-71
Identity = 145/234 (61.97%), Postives = 170/234 (72.65%), Query Frame = 1


Query: 7   SYEECRHKRLEENKKRMEALNLPLLSQALLHSSPS-KSSPSKLAKPRVTQKQLVVVRRSS 66
           SYEECR KRLEENKKRMEALNLP LSQ+L  SS S  S+P K +KPR  +K++VVVRRSS
Sbjct: 9   SYEECRRKRLEENKKRMEALNLPQLSQSLRSSSSSPNSTPMKQSKPRTVEKRVVVVRRSS 68

Query: 67  RIAKQSAPVYAEVVVNRVVIPRRISNATDLSNRVYSSDEARKNAFERAERLQSGLETNYP 126
           R+A   APVY EVV++RV +PRRI    D  N VY+S EAR+ A E+AE+LQS LE  YP
Sbjct: 69  RVANMPAPVYREVVIDRVAVPRRIFKRRDPLNLVYASAEAREYALEKAEQLQSTLEPQYP 128

Query: 127 NFIRSMLPSHVSGGFWLVSYLLSIYDLLLSLSVKLDELDGLPSHFCKTHLPNRDGIVTLI 186
             ++SMLPSHVSGGFWL  Y                 L GL   FCK+ LP  DG++TL+
Sbjct: 129 TLVKSMLPSHVSGGFWLSFY-----------------LQGLSVQFCKSSLPKNDGVITLV 188

Query: 187 DEDGDEYPTVYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTTCKARCCRV 240
           DEDG+E+PT+YLARKTGLSGGWKGFSVAH+L DGDAV+FQ IKPTT K    RV
Sbjct: 189 DEDGEEFPTIYLARKTGLSGGWKGFSVAHELTDGDAVVFQLIKPTTMKVYIIRV 225

The following BLAST results are available for this feature:

BLAST of CmoCh12G004700.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3918_ARATH	9.6e-47	48.33	B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana GN=At3g19184 PE=2...	[more]
Y5270_ARATH	3.7e-46	46.55	B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana GN=At5g42700 PE=2...	[more]
Y3845_ORYSJ	9.7e-39	41.42	B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica GN=Os0...	[more]
Y6944_ORYSJ	6.9e-37	40.59	B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica GN=Os0...	[more]
Y5814_ORYSJ	2.8e-30	35.86	B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica GN=Os0...	[more]

BLAST of CmoCh12G004700.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNH0_CUCSA	5.8e-99	78.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359980 PE=4 SV=1	[more]
A0A0A0LKX3_CUCSA	1.9e-81	69.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359985 PE=4 SV=1	[more]
A0A061FCQ7_THECC	8.7e-71	61.60	AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao G...	[more]
A0A059BSX9_EUCGR	5.6e-70	61.11	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02358 PE=4 SV=1	[more]
A0A0D2QCC6_GOSRA	7.4e-70	59.57	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G131600 PE=4 SV=1	[more]

BLAST of CmoCh12G004700.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19184.1	5.4e-48	48.33	AP2/B3-like transcriptional factor family protein	[more]
AT5G42700.1	2.1e-47	46.55	AP2/B3-like transcriptional factor family protein	[more]
AT5G58280.1	3.8e-25	32.78	AP2/B3-like transcriptional factor family protein	[more]

BLAST of CmoCh12G004700.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659087782\|ref\|XP_008444633.1\|	2.0e-100	78.69	PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis melo]	[more]
gi\|449470057\|ref\|XP_004152735.1\|	8.3e-99	78.57	PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis sativus]	[more]
gi\|700207411\|gb\|KGN62530.1\|	2.7e-81	69.53	hypothetical protein Csa_2G359985 [Cucumis sativus]	[more]
gi\|1009136289\|ref\|XP_015885454.1\|	5.4e-74	63.40	PREDICTED: B3 domain-containing protein At5g42700-like [Ziziphus jujuba]	[more]
gi\|702371665\|ref\|XP_010061764.1\|	3.3e-71	61.97	PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Eucalyptus grandis...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003340	B3_DNA-bd
IPR015300	DNA-bd_pseudobarrel_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh12G004700	CmoCh12G004700	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh12G004700.1	CmoCh12G004700.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G004700.1.exon.1	CmoCh12G004700.1.exon.1	exon
CmoCh12G004700.1.exon.2	CmoCh12G004700.1.exon.2	exon
CmoCh12G004700.1.exon.3	CmoCh12G004700.1.exon.3	exon
CmoCh12G004700.1.exon.4	CmoCh12G004700.1.exon.4	exon
CmoCh12G004700.1.exon.5	CmoCh12G004700.1.exon.5	exon
CmoCh12G004700.1.exon.6	CmoCh12G004700.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G004700.1.five_prime_UTR.1	CmoCh12G004700.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh12G004700.1.CDS.1	CmoCh12G004700.1.CDS.1	CDS
CmoCh12G004700.1.CDS.2	CmoCh12G004700.1.CDS.2	CDS
CmoCh12G004700.1.CDS.3	CmoCh12G004700.1.CDS.3	CDS
CmoCh12G004700.1.CDS.4	CmoCh12G004700.1.CDS.4	CDS
CmoCh12G004700.1.CDS.5	CmoCh12G004700.1.CDS.5	CDS
CmoCh12G004700.1.CDS.6	CmoCh12G004700.1.CDS.6	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 165..233 score: 2.
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 149..240 score: 7.6
IPR003340	B3 DNA binding domain	PROFILE	PS50863	B3	coord: 149..244 score: 9
IPR015300	DNA-binding pseudobarrel domain	GENE3D	G3DSA:2.40.330.10		coord: 121..232 score: 2.2
IPR015300	DNA-binding pseudobarrel domain	unknown	SSF101936	DNA-binding pseudobarrel domain	coord: 165..233 score: 6.67
None	No IPR available	unknown	Coil	Coil	coord: 6..26 scor
None	No IPR available	PANTHER	PTHR31391	FAMILY NOT NAMED	coord: 1..142 score: 9.6E-113coord: 165..233 score: 9.6E
None	No IPR available	PANTHER	PTHR31391:SF9	SUBFAMILY NOT NAMED	coord: 165..233 score: 9.6E-113coord: 1..142 score: 9.6E