CmoCh12G002150.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh12G002150.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr12 : 1416831 .. 1420915 (+)
Sequence length802
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATTTCTGGAGTTTTTGCAGCATCGAACTCCGTTTTCCTTGTTCGTACGTTATCCGTGCGAGTTTTCAAGCAGTCTGCGTCTTGGTTATCGAAGAATAGAGAGTATTCAGAACGCATAGGAGGAAACCGGCGGATCTGCAATGGATGTTTTCACAAGACATTTTTCTCTACTTCTCTCGATGCAAATTTCTGGAGTTTTTGCAGCATCGGACTCTGTTTTCCTTGTTCATACGTTATCCGTGCGAGTTTTCATCTTCGTGATGCAGGTATGCATTATTTCGCCGTCTCTAATTACGAAATTATGTTACTGTGCTCGATTGTGAAGAAACTTCTGGAAAAGGAGTTTCGATTACTTGTTTTTTTTTTTTTTTTTCCTTCTTTTACCTGAATCTGCATCCTTCGCGTTTTTGTTTTTGCTGTTGATTATTGCTCTGTTTTGGAGTTACGGCTTCAAGTTGGTGTAAACCGAAAAACATGAATGATGTGGATCTCTTGTTGCTTAAAACTGATGAAAAAAAGTTACGATTATCTTCTTGTAATATTCTACTAAGATTTTTGAGAGCGTGATTCTTATCGGATTGATTCCGCTGTTCTTCCTCCGCCGGTTCAAGCGGAGCCTAAAGTTTGCCTCGCAGGAAAACAACAATAATAGGCAGAAAAACCGAAATGTTTTTCACTGTATATTATAGGTGGATGCTCTCGATATTCTATCTTCAATCTTTCACAGCTTCGATAATCTGATATAGGAGAGAATGCAAAATGTCAGTATTTCTAAGTTCCATCATCTTTTGTTCTGAATTTCTGATAGAGATTGGTCAGTGTCTATAGCCTTTGTCAGTGTCTATCTTCAATCTTTCACTTCAATCTTTCACAGCTTCGATAATCTGATATAGAAGAGCATGCGAAATGTCAGTATTTCTAAATTCCATCATCTTTTGTTCTGACTTACTGATAAAGATTGGTCAGTGTCGATAGCATTAATATTTAGGAAATTGCCACATGCAGGTATCAAATAGTACTCCTGAGATGTTTGAATTATTTTATATTTCTACACTCTTTTGATTTTCTATCGAATTCACATTTCTATAATTTTATATGATTTTCTCTCAACTAATTCGTTGTTTGTAGTCCAGCTGATAGGTTCTTTTTTTAACCAGTGACCATCTTATATGACAGATCTCATTGAGTGGATCCAATTGACCTCAATTTTGGAGGTATTTTGTTACCTCTTGCAAGAAGGTAAGCTTTATAAACTAGATGGTTTAGTTATGTTTCTATTTTGTAAGTCTATTTTCAATAAGTTTGTTTCCATAACAAATGTTATAATAATGCTGGACCAACCACTCTTTTAAAAAATGCCGCAGCAGCATCAAGCACTTAATATTTCAGCTAAAGGAAAACGAACTGAAAGTTGTACTCCGTCATGGATGGCGGTCGATGAGGAAATAACCGGTACGTAATGAACTTTCCTTACATTATTTGTTTATTGTTAGTATCCGAACAATTTATTTCTTTAAACCTCAAATATTAAATTTTTGCTAAATAAAAAAACAACAAATATCATGGTAAAAAAGAAGAAAATGTTGAAAAAGAAATACTAACATTAATATAAATTTCTAGATTCTTACACTTCCTAAGTTAGTAATTTTACTGTTTACTTCAACATTTTATATTATTTTCCTTTTATCCATAAGTTGATGATCTGGATTGTATCTGAACCATAAACACAATAAAGAGGCCTATTAATGTTTATGAATTTTACGATGTCATGAAATAAGAAAAGTATAGGTAGAAAGAAAAAAAAAAGTTATTTTAAGAGTTATTTTCTGAATAAAAGTAGCTCCCAAAAAGAAAAATTATTTAGAATATTTATAAAAGAAATTGACATAAGCCTATAATTATGAACTTCTAGTATTCTATTTGAGTGTTTTGTTCCAAGATTATCAAGAGTGCTACATGAAAAGTAAAGTTATGAATTGTTCAAAGCTAAAGCATGTGTATATAAGATTGAGTAAAATGTCATCTTTATCAGTCAGTTATGAAGTTGATTTGAAAATTAAATGCATCCATATGTGTTATGATGTATAATTCCGATCAGAAAAGTAAATCGTAATGTTATGACAAAATAGGAAGACTCACCTTTGATTTTAAAAATATTACGAAGTCCTACAATTTATTGAATTCATCAATTTTGTATCAAATTGTTACATATAAAAATATGCGTTGTTCGTAAGTGGAGTATAAAGCAATTGTTTATGCCTTCAACTTTTTTTTTTCGAACAAGATTCAAATTAATAACTTATTTAATAACTTATTGAATTAAGAGTATATGCTTCATGAAAATTAAACTATCTTATTTTTAAATTTTGTCTTTTTTTAATATTTTTCCTGTGTCTAATGTATCTATAAATTTTAAGAAATATTGAATAGATCACCGAGGTTTTAGAAATTTTTAAAACTCCTTAAATGAAAAATTGATAGTCTAGAAGCCTCTTTAAGCACTAATAACTCTAAAACTTGGCTAATTGGTTTAACTTGATCAGGGAGCACCCAATGACTGCTATTTATGGAGGAAGAAGAAGCTGACTTCACATGAGCACCAATAAGGGAAGGAATCTGATGCTGCAAGTAATGAAGCTGAAACAGAGTTATTGCAGTAATTGTCGCCACAGTCGCCATACAAGGTAAGAGACTAAAATCCCGCTTAAATCACATTTTTAAATTAAAGCATGATCATTAAAATATATTAAGAACTAACGAATTAAAGTATTATCATTAAAATATATTAAGAACTAACGATACGATGCGCAACCAAAATACAACATTAGTTACTCCCGAAAGACTAACATCTCTTGGAAGCAAGATTTTTTTAGTAGAGTTTAAAGTTTACTCCGGTAGTTTCAACATATCAATTAGTTTATGTTATAATTGAGTGCTTTAAAGAAGAAAGAGATAATTTGGATAAAACCAAAGTTCAAATCTAATACAACTTTTTTGCCCGAGGAATAGATTGTTCGGTTTTCTTTTTTTTTTTTTGAACCAATTTATACCTAAATATTAAAGTGGTATCCATAAAACTCTAAACTAGTAATTATATTAATTTAAATCTAAATTTTCATTAGTGTGTCAATTTAAACTATTTATTAGATTTTGTTTAGAAAATGTTAGTTTATATGTGTGTAAACTTATATTTTATCAACTCAACTCTTAAACTCGGGTAAGTGAATTAATTTAGACTCCCAATTTAAAAATCGTTTATGTATTAATTTTTACAAATCTATTTCAAAATCCTTAATTGATTGAAATAAATAGTCTAAATTGATTCACTTACAAAAGTTTAGGAGTTTGATTGATATAATTATAAGTTTCATATATGGAAACTTACGTTTTTGAAAGACGACATTTCAAATGGTGCAAATTGATACATTAGTAAGAATTTTAGCTATTTAATTTTTCTTTATCAAATATCCTAATCTTCTCTGAGGTCAAAATTGAAAGATCATTTATTTTTTTGAGAGTTGAATAATGATTTCGTTTAGATCCTTCTAATTTGAAATTCATGTGACAGCCTAAAAATGAAACCTTCTCCATTGCTTTAGGAGGTTAAACTTTTTTACTCATTTGCTGATAATTAGTGAACACATCTTTTTATCTATTGAATAAAGAATAGAATACATTAGGTACGACGAGCATAATGCCCCTCCCCATATGTTTTTCTTTTCTTTTTCCCGAAAAGGAATAATTTAAAAGGATATATTGAACAAATCATAAACATACATTTTACGAAATATAATTAACCTGAGATTAAGGAGACTGATTTCCAACTTTTTTAACACTTTGAAATACACTATCTGCAGCCTTTCAACAGGTAAGAAGAGGGACTTGAGAAGCTTCTCGCAGTTGCACTTGCACTAGACGATTTTCCGTTTTCAGTTCCCTTGCCAGGTGTCCCACATTCGCTGAAGTCAAGTATCCGTCGCTCTTTCTACAAAAAATAAATAAACAACGAAAATATAAAATAAAAAAAAGTTGTGAATTTACGTTTTTTTTAGGTAGAAATGCTTCTGTTTTTCAATCAAG

mRNA sequence

ATGCAAATTTCTGGAGTTTTTGCAGCATCGAACTCCGTTTTCCTTGTTCGTACGTTATCCGTGCGAGTTTTCAAGCAGTCTGCGTCTTGGTTATCGAAGAATAGAGAGTATTCAGAACGCATAGGAGGAAACCGGCGGATCTGCAATGGATGTTTTCACAAGACATTTTTCTCTACTTCTCTCGATGCAAATTTCTGGAGTTTTTGCAGCATCGGACTCTGTTTTCCTTGTTCATACGTTATCCGTGCGAGTTTTCATCTTCGTGATGCAGTGACCATCTTATATGACAGATCTCATTGAGTGGATCCAATTGACCTCAATTTTGGAGGTATTTTGTTACCTCTTGCAAGAAGCATCAAGCACTTAATATTTCAGCTAAAGGAAAACGAACTGAAAGTTGTACTCCGTCATGGATGGCGGTCGATGAGGAAATAACCGGGAGCACCCAATGACTGCTATTTATGGAGGAAGAAGAAGCTGACTTCACATGAGCACCAATAAGGGAAGGAATCTGATGCTGCAAGTAATGAAGCTGAAACAGAGTTATTGCAGTAATTGTCGCCACAGTCGCCATACAAGCCTTTCAACAGGTAAGAAGAGGGACTTGAGAAGCTTCTCGCAGTTGCACTTGCACTAGACGATTTTCCGTTTTCAGTTCCCTTGCCAGGTGTCCCACATTCGCTGAAGTCAAGTATCCGTCGCTCTTTCTACAAAAAATAAATAAACAACGAAAATATAAAATAAAAAAAAGTTGTGAATTTACGTTTTTTTTAGGTAGAAATGCTTCTGTTTTTCAATCAAG

Coding sequence (CDS)

ATGCAAATTTCTGGAGTTTTTGCAGCATCGAACTCCGTTTTCCTTGTTCGTACGTTATCCGTGCGAGTTTTCAAGCAGTCTGCGTCTTGGTTATCGAAGAATAGAGAGTATTCAGAACGCATAGGAGGAAACCGGCGGATCTGCAATGGATGTTTTCACAAGACATTTTTCTCTACTTCTCTCGATGCAAATTTCTGGAGTTTTTGCAGCATCGGACTCTGTTTTCCTTGTTCATACGTTATCCGTGCGAGTTTTCATCTTCGTGATGCAGTGACCATCTTATATGACAGATCTCATTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh12G002150CmoCh12G002150gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh12G002150.1CmoCh12G002150.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh12G002150.1.exon.1CmoCh12G002150.1.exon.1exon
CmoCh12G002150.1.exon.2CmoCh12G002150.1.exon.2exon
CmoCh12G002150.1.exon.3CmoCh12G002150.1.exon.3exon
CmoCh12G002150.1.exon.4CmoCh12G002150.1.exon.4exon
CmoCh12G002150.1.exon.5CmoCh12G002150.1.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh12G002150.1.CDS.1CmoCh12G002150.1.CDS.1CDS
CmoCh12G002150.1.CDS.2CmoCh12G002150.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh12G002150.1.three_prime_UTR.1CmoCh12G002150.1.three_prime_UTR.1three_prime_UTR
CmoCh12G002150.1.three_prime_UTR.2CmoCh12G002150.1.three_prime_UTR.2three_prime_UTR
CmoCh12G002150.1.three_prime_UTR.3CmoCh12G002150.1.three_prime_UTR.3three_prime_UTR
CmoCh12G002150.1.three_prime_UTR.4CmoCh12G002150.1.three_prime_UTR.4three_prime_UTR