CmoCh11G011070.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G011070.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	B-box zinc finger family protein
Location	Cmo_Chr11 : 6193606 .. 6195044 (-)
Sequence length	1057

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATACTTTGGCTCCATCTTCGCGTTAAATCCACCTTGTGGAAAAGGCAACGCTCAGAGGTGAAATCGAGCCAACACAAGATTTGGTTTCTTCAGTGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGATCATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGCTCTGCTGATGAAGCCGCTCTTTGCCATGGCTGCGATCTCCATGTTCACCGCGCTAACAAGCTCGCCGGAAAGCACTCGAGATTCTCCCTACTTCAGCCGATCAAAATCGATTCTCCTCTTTGCGATATCTGTCAGGTATTTTTGATTCTGGCTCTGGAAAATGTTTCTGCTGCTGTGCGATTTGATTCTTTGTTTTGAGGTTTCTGTAAAATCGAATCAATGTTGCAGAGAATCTTCGCGTTCTTTTGTACCTTTCTTGGAAATATCTACTCTCTTTCGTCGGTTTCTGATCTCGTTCGTTTCTTCGATTTTTGGAGTTTGAATGATTTGGCGGAGAGGATTCTTATTTCTTTCTGAAATTTCAAATTAAAATCGATTTTGACCTCGGATTTCGTATGTAGGAACGGCGCGCGCTCGTATTCTGTCAACAAGATAGGGCCATTCTTTGCCGAGAATGCGACATTTCGATTCACGGAACGAACGAACGTACGCAGAAGCACAATCGATTTCTTCTCACAGGTGTGAAGCTTTCTTCGACTTCTTTTTCGTACCAAACATCTTCGTCCTCCAATGGCTACAATGCTGCCATGGATGTTAAAACTCGAAGCTCCCACGCTTGCAGCAAGAGCCCTAAAATGGCCGCGCACGAAACCTCGAGTTCTCCTTCCTCTGAAAAAGCTGCTCCGTCGACAAGTAATTACAAGGTCGAAGACGGCCAAGCAAGCGACGGAGGTTCGTTCTCGACTAGCAGCATATCGGAATATTTGGAGACATTGCCGGGATGGTGCGTGGAGGAGTTTCTCGATCCTTCCACCGCCGCTGCCAATCGTTTCTGTAAGGTTTGCAGTACGCCCTCTGCATAGATTGAGAGTACTTTCATGAACTTCCATATTCTTCTTCTTCCTCTTCATCTTCATCATCATCTTCTGATGGTTCCTACTTTGGATTGGTATAGTTTAACGGCGAAATTCTGGCAACTGGGAACCAAAATCTGGAGAGGCAACAGGAATCACTAGGCATCGAAAGATTTGGCAACACCTTGGAATTTGTAGGTAAATTTTCTCAAACTGGATTTTGGAATGGAGTTGGAATCTCCATGAAAACTTGTAGAGGTGAAAAAATGGCGGTGGCTGATAAGATCATCAGCAACTTTTGCTCTGAAAACAATTCTGGTAAAATCAAAAAACAAACAGAAACTAACTTTTTGTTTGTTGCTGCTGATTTGCATGTTTTACCTTACTCCCACTCTTTAGATTGC

mRNA sequence

ATAATACTTTGGCTCCATCTTCGCGTTAAATCCACCTTGTGGAAAAGGCAACGCTCAGAGGTGAAATCGAGCCAACACAAGATTTGGTTTCTTCAGTGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGATCATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGCTCTGCTGATGAAGCCGCTCTTTGCCATGGCTGCGATCTCCATGTTCACCGCGCTAACAAGCTCGCCGGAAAGCACTCGAGATTCTCCCTACTTCAGCCGATCAAAATCGATTCTCCTCTTTGCGATATCTGTCAGGAACGGCGCGCGCTCGTATTCTGTCAACAAGATAGGGCCATTCTTTGCCGAGAATGCGACATTTCGATTCACGGAACGAACGAACGTACGCAGAAGCACAATCGATTTCTTCTCACAGGTGTGAAGCTTTCTTCGACTTCTTTTTCGTACCAAACATCTTCGTCCTCCAATGGCTACAATGCTGCCATGGATGTTAAAACTCGAAGCTCCCACGCTTGCAGCAAGAGCCCTAAAATGGCCGCGCACGAAACCTCGAGTTCTCCTTCCTCTGAAAAAGCTGCTCCGTCGACAAGTAATTACAAGGTCGAAGACGGCCAAGCAAGCGACGGAGGTTCGTTCTCGACTAGCAGCATATCGGAATATTTGGAGACATTGCCGGGATGGTGCGTGGAGGAGTTTCTCGATCCTTCCACCGCCGCTGCCAATCGTTTCTGTAAGTTTAACGGCGAAATTCTGGCAACTGGGAACCAAAATCTGGAGAGGCAACAGGAATCACTAGGCATCGAAAGATTTGGCAACACCTTGGAATTTGTAGGTAAATTTTCTCAAACTGGATTTTGGAATGGAGTTGGAATCTCCATGAAAACTTGTAGAGGTGAAAAAATGGCGGTGGCTGATAAGATCATCAGCAACTTTTGCTCTGAAAACAATTCTGGTAAAATCAAAAAACAAACAGAAACTAACTTTTTGTTTGTTGCTGCTGATTTGCATGTTTTACCTTACTCCCACTCTTTAGATTGC

Coding sequence (CDS)

ATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGCTCTGCTGATGAAGCCGCTCTTTGCCATGGCTGCGATCTCCATGTTCACCGCGCTAACAAGCTCGCCGGAAAGCACTCGAGATTCTCCCTACTTCAGCCGATCAAAATCGATTCTCCTCTTTGCGATATCTGTCAGGAACGGCGCGCGCTCGTATTCTGTCAACAAGATAGGGCCATTCTTTGCCGAGAATGCGACATTTCGATTCACGGAACGAACGAACGTACGCAGAAGCACAATCGATTTCTTCTCACAGGTGTGAAGCTTTCTTCGACTTCTTTTTCGTACCAAACATCTTCGTCCTCCAATGGCTACAATGCTGCCATGGATGTTAAAACTCGAAGCTCCCACGCTTGCAGCAAGAGCCCTAAAATGGCCGCGCACGAAACCTCGAGTTCTCCTTCCTCTGAAAAAGCTGCTCCGTCGACAAGTAATTACAAGGTCGAAGACGGCCAAGCAAGCGACGGAGGTTCGTTCTCGACTAGCAGCATATCGGAATATTTGGAGACATTGCCGGGATGGTGCGTGGAGGAGTTTCTCGATCCTTCCACCGCCGCTGCCAATCGTTTCTGTAAGTTTAACGGCGAAATTCTGGCAACTGGGAACCAAAATCTGGAGAGGCAACAGGAATCACTAGGCATCGAAAGATTTGGCAACACCTTGGAATTTGTAGGTAAATTTTCTCAAACTGGATTTTGGAATGGAGTTGGAATCTCCATGAAAACTTGTAGAGGTGAAAAAATGGCGGTGGCTGATAAGATCATCAGCAACTTTTGCTCTGAAAACAATTCTGGTAAAATCAAAAAACAAACAGAAACTAACTTTTTGTTTGTTGCTGCTGATTTGCATGTTTTACCTTACTCCCACTCTTTAGATTGC

Homology

[Close]

BLAST of CmoCh11G011070.1 vs. Swiss-Prot
Match: BBX20_ARATH (B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.0e-53
Identity = 130/255 (50.98%), Postives = 157/255 (61.57%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI C VCD+ EASVFC ADEAALC+GCD HVH ANKLAGKH RFSL  P   D+PLCDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           C ERRAL+FCQ+DRAILCRECDI IH  NE T+KHNRFLLTGVK+S++  +Y  +S+SN 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 YNAAMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDG--QASDGGSFS-- 180
             A    KTR     S+ P  A++E  +S SS     S   Y +E+     SD GS S  
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSS--TTTSNCYYGIEENYHHVSDSGSGSGC 180

Query: 181 TSSISEYL-ETLPGWCVEEFLDPSTAAANRFCKFNGEILATGNQNLERQQESLGIERFGN 240
           T SISEYL ETLPGW VE+ L+  +      C    + + T N N E  +          
Sbjct: 181 TGSISEYLMETLPGWRVEDLLEHPS------CVSYEDNIITNNNNSESYR---------- 237

Query: 241 TLEFVGKFSQTGFWN 251
             +   +F   GFW+
Sbjct: 241 VYDGSSQFHHQGFWD 237

[Close]

BLAST of CmoCh11G011070.1 vs. Swiss-Prot
Match: BBX21_ARATH (B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 117/203 (57.64%), Postives = 141/203 (69.46%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKID--SPLC 60
           MKIRCDVCD+ EASVFC+ADEA+LC GCD  VH ANKLA KH RFSLL P   +  SPLC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQ-TSSS 120
           DICQ+++AL+FCQQDRAILC++CD SIH  NE T+KH+RFLLTGVKLS+TS  Y+ TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SNGYNAAMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFST 180
           S+  ++  D     S     +P       S+ P S K  P +   K+  G AS     ST
Sbjct: 121 SSSSSSNQDFSVPGSSI--SNPPPLKKPLSAPPQSNKIQPFS---KINGGDASVNQWGST 180

Query: 181 SSISEYL-ETLPGWCVEEFLDPS 200
           S+ISEYL +TLPGW VE+FLD S
Sbjct: 181 STISEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of CmoCh11G011070.1 vs. Swiss-Prot
Match: BBX24_ARATH (B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 68/148 (45.95%), Postives = 88/148 (59.46%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI+CDVC++A A+V C ADEAALC  CD+ +H ANKLA KH R  L   +    P CDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL-NSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTS------FSYQT 120
           CQE+ A +FC +DRA+LCR+CD SIH  N R+  H RFL TG+K++ TS           
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 SSSSNGYNAAMDVKTRSSHACSKSPKMA 143
              SN    A  +  +S+    + P  A
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSA 147

[Close]

BLAST of CmoCh11G011070.1 vs. Swiss-Prot
Match: BBX22_ARATH (B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.7e-28
Identity = 80/198 (40.40%), Postives = 104/198 (52.53%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI+C+VC+ AEA+V C ADEAALC  CD  +H ANKLAGKH R  L        P CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASAS-SIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQE     FC QDRA+LCR+CD++IH  N     H RFLLTG+K+   S     S+ S+ 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 YNAAMDVKTRSSHACSKSPKMAA----HETSSSPSSEKAAPSTSNYKVEDGQASDGGSFS 180
            N    ++T+        P+  A    H        E   P T   KV D  ++     S
Sbjct: 121 TNDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGT---KVNDQTSTKLPLVS 180

Query: 181 TSSISEYLETLPGWCVEE 195
           + S +    ++P W +EE
Sbjct: 181 SGSTT---GSIPQWQIEE 191

[Close]

BLAST of CmoCh11G011070.1 vs. Swiss-Prot
Match: BBX25_ARATH (B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 5.7e-28
Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI+CDVC++A A++ C ADEAALC  CD+ VH ANKLA KH R   L  +    P CDI
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRL-FLDSLSTKFPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           C E+ A +FC +DRA+LCR+CD + H  N R+  H RFL TG++++ +S S       N 
Sbjct: 61  CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNH 120

Query: 121 YN 123
           ++
Sbjct: 121 FD 121

[Close]

BLAST of CmoCh11G011070.1 vs. TrEMBL
Match: A0A0A0K4F8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G004690 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 3.9e-84
Identity = 175/212 (82.55%), Postives = 185/212 (87.26%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKIRCDVCDQ EASVFC ADEAALCH CDLHVHRANKLAGKHSRFSLLQPIK DSP CDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIH TNE TQKHNRFLLTGVKLSST FSYQTSSSSN 
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNA 120

Query: 121 --YNAAMDVKTRSSHACSKSPKMAAHE---TSSSPSSEKAAP--STSNYKV-EDGQA-SD 180
              +AAMDVKT SS+ACSK PKMA  +   +S+S S+EKA P  +++NY V +DGQA SD
Sbjct: 121 CDIDAAMDVKTGSSNACSKRPKMAPKDQQISSTSHSAEKATPPSTSNNYLVDQDGQALSD 180

Query: 181 GGSFSTSSISEYLETLPGWCVEEFLDPSTAAA 204
           GGSFSTSSISEYLETLPGWCVEEFLDPS AAA
Sbjct: 181 GGSFSTSSISEYLETLPGWCVEEFLDPSAAAA 212

[Close]

BLAST of CmoCh11G011070.1 vs. TrEMBL
Match: A0A061E0N0_THECC (B-box zinc finger family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_006809 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-63
Identity = 143/213 (67.14%), Postives = 164/213 (77.00%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI CDVCD+ EA VFCSADEAALC  CD  VH ANKLA KHSRFSLL P   +SPLCDI
Sbjct: 1   MKIWCDVCDKDEAVVFCSADEAALCESCDRRVHHANKLARKHSRFSLLHPTFKESPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFS---YQTSSS 120
           CQ RRA +FCQ+DRAILCRECD+ IH TNE TQKHNRFLLTGVKLSS+S S     TSSS
Sbjct: 61  CQVRRAFLFCQEDRAILCRECDLPIHRTNEHTQKHNRFLLTGVKLSSSSSSPCLNPTSSS 120

Query: 121 SNGYNA-AMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFS 180
           SNG+NA  +D +T+SS +C +   ++ +E  SSPS EK  PST++ KVED   SD  S S
Sbjct: 121 SNGHNATTIDSETKSSQSCKRFRSVSNNEIFSSPSIEKPLPSTTD-KVEDNCTSDTVSIS 180

Query: 181 TSSISEYL-ETLPGWCVEEFLDPSTAAANRFCK 209
           TSSISEYL ETLPGW V++FL+PS +AAN FCK
Sbjct: 181 TSSISEYLMETLPGWRVDDFLEPS-SAANGFCK 211

[Close]

BLAST of CmoCh11G011070.1 vs. TrEMBL
Match: A0A061DYV0_THECC (B-box zinc finger family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_006809 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.2e-62
Identity = 139/207 (67.15%), Postives = 160/207 (77.29%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI CDVCD+ EA VFCSADEAALC  CD  VH ANKLA KHSRFSLL P   +SPLCDI
Sbjct: 1   MKIWCDVCDKDEAVVFCSADEAALCESCDRRVHHANKLARKHSRFSLLHPTFKESPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFS---YQTSSS 120
           CQ RRA +FCQ+DRAILCRECD+ IH TNE TQKHNRFLLTGVKLSS+S S     TSSS
Sbjct: 61  CQVRRAFLFCQEDRAILCRECDLPIHRTNEHTQKHNRFLLTGVKLSSSSSSPCLNPTSSS 120

Query: 121 SNGYNA-AMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFS 180
           SNG+NA  +D +T+SS +C +   ++ +E  SSPS EK  PST++ KVED   SD  S S
Sbjct: 121 SNGHNATTIDSETKSSQSCKRFRSVSNNEIFSSPSIEKPLPSTTD-KVEDNCTSDTVSIS 180

Query: 181 TSSISEYL-ETLPGWCVEEFLDPSTAA 203
           TSSISEYL ETLPGW V++FL+PS+AA
Sbjct: 181 TSSISEYLMETLPGWRVDDFLEPSSAA 206

[Close]

BLAST of CmoCh11G011070.1 vs. TrEMBL
Match: W9S3C1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008433 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.5e-59
Identity = 139/237 (58.65%), Postives = 164/237 (69.20%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKIRCDVCD+ EASVFCSADEAALC GCD  VH ANKLA KH RFSLLQP   +SPLCDI
Sbjct: 1   MKIRCDVCDREEASVFCSADEAALCDGCDRRVHHANKLASKHPRFSLLQPTFKESPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQERR+ +FCQ+DRAILCRECDISIH  NE TQKHNRFLLTGVKLS++S  Y   +SS  
Sbjct: 61  CQERRSFLFCQEDRAILCRECDISIHRANEHTQKHNRFLLTGVKLSASSSLYNNQTSSTS 120

Query: 121 YNAAMDVKTR-SSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFSTSS 180
              + D++ + SS A +K  +  ++E S S S E   P  SN        +D  S+STSS
Sbjct: 121 -TTSTDLRIQPSSTATTKRSRTVSNEISGSASVE-INPVPSN--------TDNASYSTSS 180

Query: 181 ISEYL-ETLPGWCVEEFLDPSTAAANRFCKFNGEILATGNQNLERQQESLGIERFGN 236
           ISEYL ETLPGW VE+FLDPS  A+N FCK N   ++  + + E  + SL  E   N
Sbjct: 181 ISEYLMETLPGWHVEDFLDPS-FASNGFCKTNSHSVSFVDDDFESNKSSLSSEELVN 226

[Close]

BLAST of CmoCh11G011070.1 vs. TrEMBL
Match: B9H0W3_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s16810g PE=4 SV=2)

HSP 1 Score: 235.0 bits (598), Expect = 1.3e-58
Identity = 128/205 (62.44%), Postives = 155/205 (75.61%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKIRCDVCD  EA+VFC ADEAALC GCD  VH ANKLA KHSRFSL+ P   +SPLCDI
Sbjct: 1   MKIRCDVCDNVEATVFCCADEAALCDGCDHRVHHANKLASKHSRFSLVHPSFKESPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQERRAL+FCQ+DRAILCRECD+ IH  NE TQKHNRFLLTGVKLS++S S  T+SS++ 
Sbjct: 61  CQERRALLFCQEDRAILCRECDLPIHKANEHTQKHNRFLLTGVKLSASS-SLHTASSTST 120

Query: 121 YNAAMDVKTRSSHACSKSPKMA-AHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFSTSS 180
            N   ++ T S+   +  P +  ++E  SSPS E A+ +T+ Y  E+   SD GS STSS
Sbjct: 121 NNFDSNINTTSNR--NHQPYLKNSNEILSSPSVETASATTA-YNFEENHVSDNGSISTSS 180

Query: 181 ISEYLETLPGWCVEEFLDPSTAAAN 205
           ISEYLET+PGW +++FLDPS A+ N
Sbjct: 181 ISEYLETVPGWRIDDFLDPSFASNN 201

[Close]

BLAST of CmoCh11G011070.1 vs. TAIR10
Match: AT4G39070.1 (AT4G39070.1 B-box zinc finger family protein)

HSP 1 Score: 211.8 bits (538), Expect = 5.8e-55
Identity = 130/255 (50.98%), Postives = 157/255 (61.57%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI C VCD+ EASVFC ADEAALC+GCD HVH ANKLAGKH RFSL  P   D+PLCDI
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           C ERRAL+FCQ+DRAILCRECDI IH  NE T+KHNRFLLTGVK+S++  +Y  +S+SN 
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120

Query: 121 YNAAMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDG--QASDGGSFS-- 180
             A    KTR     S+ P  A++E  +S SS     S   Y +E+     SD GS S  
Sbjct: 121 AAAFGRAKTRPKSVSSEVPSSASNEVFTSSSS--TTTSNCYYGIEENYHHVSDSGSGSGC 180

Query: 181 TSSISEYL-ETLPGWCVEEFLDPSTAAANRFCKFNGEILATGNQNLERQQESLGIERFGN 240
           T SISEYL ETLPGW VE+ L+  +      C    + + T N N E  +          
Sbjct: 181 TGSISEYLMETLPGWRVEDLLEHPS------CVSYEDNIITNNNNSESYR---------- 237

Query: 241 TLEFVGKFSQTGFWN 251
             +   +F   GFW+
Sbjct: 241 VYDGSSQFHHQGFWD 237

[Close]

BLAST of CmoCh11G011070.1 vs. TAIR10
Match: AT1G75540.1 (AT1G75540.1 salt tolerance homolog2)

HSP 1 Score: 201.4 bits (511), Expect = 7.8e-52
Identity = 117/203 (57.64%), Postives = 141/203 (69.46%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKID--SPLC 60
           MKIRCDVCD+ EASVFC+ADEA+LC GCD  VH ANKLA KH RFSLL P   +  SPLC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DICQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQ-TSSS 120
           DICQ+++AL+FCQQDRAILC++CD SIH  NE T+KH+RFLLTGVKLS+TS  Y+ TS S
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 SNGYNAAMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFST 180
           S+  ++  D     S     +P       S+ P S K  P +   K+  G AS     ST
Sbjct: 121 SSSSSSNQDFSVPGSSI--SNPPPLKKPLSAPPQSNKIQPFS---KINGGDASVNQWGST 180

Query: 181 SSISEYL-ETLPGWCVEEFLDPS 200
           S+ISEYL +TLPGW VE+FLD S
Sbjct: 181 STISEYLMDTLPGWHVEDFLDSS 198

[Close]

BLAST of CmoCh11G011070.1 vs. TAIR10
Match: AT1G06040.1 (AT1G06040.1 B-box zinc finger family protein)

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30
Identity = 68/148 (45.95%), Postives = 88/148 (59.46%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI+CDVC++A A+V C ADEAALC  CD+ +H ANKLA KH R  L   +    P CDI
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL-NSLSTKFPRCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTS------FSYQT 120
           CQE+ A +FC +DRA+LCR+CD SIH  N R+  H RFL TG+K++ TS           
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 SSSSNGYNAAMDVKTRSSHACSKSPKMA 143
              SN    A  +  +S+    + P  A
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSA 147

[Close]

BLAST of CmoCh11G011070.1 vs. TAIR10
Match: AT1G78600.2 (AT1G78600.2 light-regulated zinc finger protein 1)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-29
Identity = 80/198 (40.40%), Postives = 104/198 (52.53%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI+C+VC+ AEA+V C ADEAALC  CD  +H ANKLAGKH R  L        P CDI
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASAS-SIPKCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQE     FC QDRA+LCR+CD++IH  N     H RFLLTG+K+   S     S+ S+ 
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSP 120

Query: 121 YNAAMDVKTRSSHACSKSPKMAA----HETSSSPSSEKAAPSTSNYKVEDGQASDGGSFS 180
            N    ++T+        P+  A    H        E   P T   KV D  ++     S
Sbjct: 121 TNDDKTMETKPFVQSIPEPQKMAFDHHHHQQQQEQQEGVIPGT---KVNDQTSTKLPLVS 180

Query: 181 TSSISEYLETLPGWCVEE 195
           + S +    ++P W +EE
Sbjct: 181 SGSTT---GSIPQWQIEE 191

[Close]

BLAST of CmoCh11G011070.1 vs. TAIR10
Match: AT2G31380.1 (AT2G31380.1 salt tolerance homologue)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-29
Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI+CDVC++A A++ C ADEAALC  CD+ VH ANKLA KH R   L  +    P CDI
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRL-FLDSLSTKFPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           C E+ A +FC +DRA+LCR+CD + H  N R+  H RFL TG++++ +S S       N 
Sbjct: 61  CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNH 120

Query: 121 YN 123
           ++
Sbjct: 121 FD 121

[Close]

BLAST of CmoCh11G011070.1 vs. NCBI nr
Match: gi|659094446|ref|XP_008448064.1| (PREDICTED: B-box zinc finger protein 20-like isoform X1 [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 1.6e-91
Identity = 195/244 (79.92%), Postives = 206/244 (84.43%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKIRCDVCDQ EASVFC ADEAALCH CDLHVHRANKLAGKHSRFSLLQPIK DSP CDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIH TNE TQKHNRFLLTGVKLSST FSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 --YNAAMDVKTRSSHA-CSKSPKMAA--HETSSSPSSEKAA-PSTSNYKV-EDGQA-SDG 180
              +A MDVKT SS+A CSK PKMAA   + S+S S+EKA  PSTSN+ V +DGQA SDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSFSTSSISEYLETLPGWCVEEFLDPS-----TAAANRFCKF-NGEILATGNQNLERQQE 231
           GSFSTSSISEYLETLPGWCVEEFLDPS      AAANRFCK  NGEIL  GN NLE ++E
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRFCKINNGEILGFGNGNLEGEEE 240

[Close]

BLAST of CmoCh11G011070.1 vs. NCBI nr
Match: gi|659094448|ref|XP_008448065.1| (PREDICTED: B-box zinc finger protein 20-like isoform X2 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 1.0e-85
Identity = 183/221 (82.81%), Postives = 190/221 (85.97%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKIRCDVCDQ EASVFC ADEAALCH CDLHVHRANKLAGKHSRFSLLQPIK DSP CDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIH TNE TQKHNRFLLTGVKLSST FSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 --YNAAMDVKTRSSHA-CSKSPKMAA--HETSSSPSSEKAA-PSTSNYKV-EDGQA-SDG 180
              +A MDVKT SS+A CSK PKMAA   + S+S S+EKA  PSTSN+ V +DGQA SDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSFSTSSISEYLETLPGWCVEEFLDPS-----TAAANRFCK 209
           GSFSTSSISEYLETLPGWCVEEFLDPS      AAANRFCK
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRFCK 221

[Close]

BLAST of CmoCh11G011070.1 vs. NCBI nr
Match: gi|659094450|ref|XP_008448066.1| (PREDICTED: B-box zinc finger protein 20-like isoform X3 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 4.3e-84
Identity = 181/219 (82.65%), Postives = 188/219 (85.84%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKIRCDVCDQ EASVFC ADEAALCH CDLHVHRANKLAGKHSRFSLLQPIK DSP CDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIH TNE TQKHNRFLLTGVKLSST FSYQTSSSSNG
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNG 120

Query: 121 --YNAAMDVKTRSSHA-CSKSPKMAA--HETSSSPSSEKAA-PSTSNYKV-EDGQA-SDG 180
              +A MDVKT SS+A CSK PKMAA   + S+S S+EKA  PSTSN+ V +DGQA SDG
Sbjct: 121 CDIDAPMDVKTGSSNASCSKRPKMAAKDQQISTSHSAEKATPPSTSNHLVDQDGQALSDG 180

Query: 181 GSFSTSSISEYLETLPGWCVEEFLDPS-----TAAANRF 207
           GSFSTSSISEYLETLPGWCVEEFLDPS      AAANRF
Sbjct: 181 GSFSTSSISEYLETLPGWCVEEFLDPSAAAAAAAAANRF 219

[Close]

BLAST of CmoCh11G011070.1 vs. NCBI nr
Match: gi|449461609|ref|XP_004148534.1| (PREDICTED: B-box zinc finger protein 20 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 5.6e-84
Identity = 175/212 (82.55%), Postives = 185/212 (87.26%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKIRCDVCDQ EASVFC ADEAALCH CDLHVHRANKLAGKHSRFSLLQPIK DSP CDI
Sbjct: 1   MKIRCDVCDQTEASVFCYADEAALCHACDLHVHRANKLAGKHSRFSLLQPIKKDSPPCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFSYQTSSSSNG 120
           CQERRALVFCQQDRAILCRECDISIH TNE TQKHNRFLLTGVKLSST FSYQTSSSSN 
Sbjct: 61  CQERRALVFCQQDRAILCRECDISIHETNEHTQKHNRFLLTGVKLSSTCFSYQTSSSSNA 120

Query: 121 --YNAAMDVKTRSSHACSKSPKMAAHE---TSSSPSSEKAAP--STSNYKV-EDGQA-SD 180
              +AAMDVKT SS+ACSK PKMA  +   +S+S S+EKA P  +++NY V +DGQA SD
Sbjct: 121 CDIDAAMDVKTGSSNACSKRPKMAPKDQQISSTSHSAEKATPPSTSNNYLVDQDGQALSD 180

Query: 181 GGSFSTSSISEYLETLPGWCVEEFLDPSTAAA 204
           GGSFSTSSISEYLETLPGWCVEEFLDPS AAA
Sbjct: 181 GGSFSTSSISEYLETLPGWCVEEFLDPSAAAA 212

[Close]

BLAST of CmoCh11G011070.1 vs. NCBI nr
Match: gi|590685301|ref|XP_007042065.1| (B-box zinc finger family protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 143/213 (67.14%), Postives = 164/213 (77.00%), Query Frame = 1


Query: 1   MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKIDSPLCDI 60
           MKI CDVCD+ EA VFCSADEAALC  CD  VH ANKLA KHSRFSLL P   +SPLCDI
Sbjct: 1   MKIWCDVCDKDEAVVFCSADEAALCESCDRRVHHANKLARKHSRFSLLHPTFKESPLCDI 60

Query: 61  CQERRALVFCQQDRAILCRECDISIHGTNERTQKHNRFLLTGVKLSSTSFS---YQTSSS 120
           CQ RRA +FCQ+DRAILCRECD+ IH TNE TQKHNRFLLTGVKLSS+S S     TSSS
Sbjct: 61  CQVRRAFLFCQEDRAILCRECDLPIHRTNEHTQKHNRFLLTGVKLSSSSSSPCLNPTSSS 120

Query: 121 SNGYNA-AMDVKTRSSHACSKSPKMAAHETSSSPSSEKAAPSTSNYKVEDGQASDGGSFS 180
           SNG+NA  +D +T+SS +C +   ++ +E  SSPS EK  PST++ KVED   SD  S S
Sbjct: 121 SNGHNATTIDSETKSSQSCKRFRSVSNNEIFSSPSIEKPLPSTTD-KVEDNCTSDTVSIS 180

Query: 181 TSSISEYL-ETLPGWCVEEFLDPSTAAANRFCK 209
           TSSISEYL ETLPGW V++FL+PS +AAN FCK
Sbjct: 181 TSSISEYLMETLPGWRVDDFLEPS-SAANGFCK 211

The following BLAST results are available for this feature:

BLAST of CmoCh11G011070.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BBX20_ARATH	1.0e-53	50.98	B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1 SV=1	[more]
BBX21_ARATH	1.4e-50	57.64	B-box zinc finger protein 21 OS=Arabidopsis thaliana GN=BBX21 PE=1 SV=1	[more]
BBX24_ARATH	1.8e-29	45.95	B-box zinc finger protein 24 OS=Arabidopsis thaliana GN=BBX24 PE=1 SV=1	[more]
BBX22_ARATH	5.7e-28	40.40	B-box zinc finger protein 22 OS=Arabidopsis thaliana GN=BBX22 PE=1 SV=2	[more]
BBX25_ARATH	5.7e-28	48.36	B-box zinc finger protein 25 OS=Arabidopsis thaliana GN=BBX25 PE=1 SV=2	[more]

BLAST of CmoCh11G011070.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4F8_CUCSA	3.9e-84	82.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G004690 PE=4 SV=1	[more]
A0A061E0N0_THECC	2.2e-63	67.14	B-box zinc finger family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_0...	[more]
A0A061DYV0_THECC	7.2e-62	67.15	B-box zinc finger family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]
W9S3C1_9ROSA	2.5e-59	58.65	Uncharacterized protein OS=Morus notabilis GN=L484_008433 PE=4 SV=1	[more]
B9H0W3_POPTR	1.3e-58	62.44	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s16810g P...	[more]

BLAST of CmoCh11G011070.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39070.1	5.8e-55	50.98	B-box zinc finger family protein	[more]
AT1G75540.1	7.8e-52	57.64	salt tolerance homolog2	[more]
AT1G06040.1	1.0e-30	45.95	B-box zinc finger family protein	[more]
AT1G78600.2	3.2e-29	40.40	light-regulated zinc finger protein 1	[more]
AT2G31380.1	3.2e-29	48.36	salt tolerance homologue	[more]

BLAST of CmoCh11G011070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094446\|ref\|XP_008448064.1\|	1.6e-91	79.92	PREDICTED: B-box zinc finger protein 20-like isoform X1 [Cucumis melo]	[more]
gi\|659094448\|ref\|XP_008448065.1\|	1.0e-85	82.81	PREDICTED: B-box zinc finger protein 20-like isoform X2 [Cucumis melo]	[more]
gi\|659094450\|ref\|XP_008448066.1\|	4.3e-84	82.65	PREDICTED: B-box zinc finger protein 20-like isoform X3 [Cucumis melo]	[more]
gi\|449461609\|ref\|XP_004148534.1\|	5.6e-84	82.55	PREDICTED: B-box zinc finger protein 20 [Cucumis sativus]	[more]
gi\|590685301\|ref\|XP_007042065.1\|	3.2e-63	67.14	B-box zinc finger family protein, putative isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000315	Znf_B-box

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048583	regulation of response to stimulus
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh11G011070	CmoCh11G011070	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh11G011070.1	CmoCh11G011070.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G011070.1.CDS.3	CmoCh11G011070.1.CDS.3	CDS
CmoCh11G011070.1.CDS.2	CmoCh11G011070.1.CDS.2	CDS
CmoCh11G011070.1.CDS.1	CmoCh11G011070.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G011070.1.five_prime_UTR.1	CmoCh11G011070.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G011070.1.exon.3	CmoCh11G011070.1.exon.3	exon
CmoCh11G011070.1.exon.2	CmoCh11G011070.1.exon.2	exon
CmoCh11G011070.1.exon.1	CmoCh11G011070.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 56..95 score: 4.3E-7coord: 3..44 score: 1.
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 score: 1.3E-7coord: 53..100 score: 2.2
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 53..100 score: 9.869coord: 1..47 score: 9
None	No IPR available	PANTHER	PTHR31832	FAMILY NOT NAMED	coord: 1..208 score: 5.6
None	No IPR available	PANTHER	PTHR31832:SF6	SUBFAMILY NOT NAMED	coord: 1..208 score: 5.6