CmoCh11G008910.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G008910.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF4228 domain protein
Location	Cmo_Chr11 : 4559591 .. 4560205 (+)
Sequence length	615

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAATGCCGCCGCCTCTCCATGTTATGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGTCACACCATCCCCTCCTTAGGCACCGACGACAAACTCATCGCCGGCGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGACGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGGAGTATGAAATTAGGCATTCACCCTATAAATTTGTAGGGTTTAAACTCAAACAAAAAGAAGGCTAA

mRNA sequence

ATGGGCAATGCCGCCGCCTCTCCATGTTATGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGTCACACCATCCCCTCCTTAGGCACCGACGACAAACTCATCGCCGGCGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGACGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGGAGTATGAAATTAGGCATTCACCCTATAAATTTGTAGGGTTTAAACTCAAACAAAAAGAAGGCTAA

Coding sequence (CDS)

ATGGGCAATGCCGCCGCCTCTCCATGTTATGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGTCACACCATCCCCTCCTTAGGCACCGACGACAAACTCATCGCCGGCGAGACCTACTTCATCCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTTTCCGGTCCTTGTCCGTTTGAGTATGTTCGAAACGCAAATGGAAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGACGACGGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGATCGAAGGGCCCGGTTTGGTCCCCCAAATTGGAGAGCATTTCGGAGTATGAAATTAGGCATTCACCCTATAAATTTGTAGGGTTTAAACTCAAACAAAAAGAAGGCTAA

Homology

[Close]

BLAST of CmoCh11G008910.1 vs. TrEMBL
Match: A0A0A0LZV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627480 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.6e-78
Identity = 152/213 (71.36%), Postives = 172/213 (80.75%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSR--RRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHAD 60
           MGNA  SPC +SIS+SR  RR S VKLVF++G T+ L G HH AGEIMF+FP+ M+CHA+
Sbjct: 1   MGNAV-SPCLLSISISRCHRRPSTVKLVFTNGPTKFLAGDHHFAGEIMFQFPDMMVCHAE 60

Query: 61  SFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCP 120
           SFFIGH IPSL  DD+LIAGETY ILP+D FAS DVL+TSSLA +GA      KFSGPCP
Sbjct: 61  SFFIGHPIPSLSIDDQLIAGETYLILPIDRFASVDVLSTSSLATIGAGNMSVEKFSGPCP 120

Query: 121 FEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-K 180
           FEYVR  NG+VLIKV PEFI+RLIS A       +GGGG FLCSTPELKKHYDQLVGS K
Sbjct: 121 FEYVRGTNGKVLIKVMPEFIVRLISQAAMDGGESEGGGGGFLCSTPELKKHYDQLVGSTK 180

Query: 181 GPVWSPKLESISEYEIRHSPYKFVGFKLKQKEG 205
           G VWSPKLE+ISEY+IR+SP +FVGFKLKQKEG
Sbjct: 181 GQVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of CmoCh11G008910.1 vs. TrEMBL
Match: A0A0D2N954_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G134300 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.7e-59
Identity = 123/205 (60.00%), Postives = 149/205 (72.68%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSF 60
           MGN+  SPC+          S+VKL+F +G TR+L GKH +AGE+MF FP+ M+CHADSF
Sbjct: 1   MGNSI-SPCF-----HPNPRSSVKLIFWEGNTRILTGKH-IAGEVMFEFPDKMVCHADSF 60

Query: 61  FIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAAL-GAQKAKTVKFSGPCPF 120
           FIGH IP LG DD L+ G+TYF+LPLD F   +VL+ SSLAAL  + K   + F G CPF
Sbjct: 61  FIGHPIPVLGIDDDLMPGQTYFVLPLDRFPCMNVLSASSLAALKSSPKPAPINF-GDCPF 120

Query: 121 EYVRNANGRVLIKVAPEFILRLI-SPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPK 180
           EYV+ +NGRVLIKV PEFI  LI    ++G    FLCSTPELKKHYD LVGSK  VWSPK
Sbjct: 121 EYVKGSNGRVLIKVLPEFITSLIHGSKEEGSENSFLCSTPELKKHYDMLVGSKEQVWSPK 180

Query: 181 LESISEYEIRHSPYKFVGFKLKQKE 204
           LE+ISEY+IR SP +F+G + KQKE
Sbjct: 181 LETISEYKIRFSPCRFIGLEWKQKE 197

[Close]

BLAST of CmoCh11G008910.1 vs. TrEMBL
Match: A0A061GTT2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_040942 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-58
Identity = 122/207 (58.94%), Postives = 152/207 (73.43%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSF 60
           MGN+  SPC+   S      S VKL+F +G TR+L GKH +AGE+MF FP+ M+CHADSF
Sbjct: 1   MGNSI-SPCFHPNS-----RSLVKLIFWEGNTRILTGKH-IAGEVMFEFPDRMVCHADSF 60

Query: 61  FIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFE 120
           FIGH IP+LG DD+L+ G+TYF+LPLD FA  +VL+ SSLAAL +    +    G CPFE
Sbjct: 61  FIGHPIPALGIDDELMPGQTYFVLPLDRFAC-NVLSASSLAALNSSPKPSPINFGDCPFE 120

Query: 121 YVRNANGRVLIKVAPEFILRLISPADD----GGGGQFLCSTPELKKHYDQLVGSKGPVWS 180
           Y++ +NGRVLIKV PEFI RLI+ + +      G  FLCSTPELKKHY+ LVGSK  VWS
Sbjct: 121 YIKGSNGRVLIKVVPEFITRLINRSREEEIGSPGNSFLCSTPELKKHYEMLVGSKEQVWS 180

Query: 181 PKLESISEYEIRHSPYKFVGFKLKQKE 204
           PKLE+ISEY+IR SP +F+G + KQKE
Sbjct: 181 PKLETISEYKIRFSPCRFIGLEWKQKE 199

[Close]

BLAST of CmoCh11G008910.1 vs. TrEMBL
Match: A0A151U210_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_005912 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58
Identity = 117/209 (55.98%), Postives = 152/209 (72.73%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSF 60
           MGNA  +PC+   + +   SS+V L+F +G TR L GKH +AGEIMF FP+ ++CHADSF
Sbjct: 1   MGNAIRTPCFQLHNTNSSSSSSVNLIFWEGTTRSLKGKH-IAGEIMFEFPDKIVCHADSF 60

Query: 61  FIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFE 120
           FIGH IP+L  DD+L+ G+TYF+LP+DLFA    L+ +S++ALG+   K+    G CPFE
Sbjct: 61  FIGHPIPALSIDDELMPGQTYFVLPIDLFAC-HTLSVASISALGSCPNKSPIKFGACPFE 120

Query: 121 YVRNANGRVLIKVAPEFILRLISPADD------GGGGQFLCSTPELKKHYDQLVGSKGPV 180
           Y++ +NGRVLIKV PEFI RLIS   +      G    FLCSTPEL+KHY+QLV SK  V
Sbjct: 121 YLKGSNGRVLIKVMPEFITRLISGDKENNIGPPGSPSSFLCSTPELQKHYEQLVKSKDQV 180

Query: 181 WSPKLESISEYEIRHSPYKFVGFKLKQKE 204
           WSPKLE+ISEY+IR SP +F+G + K+KE
Sbjct: 181 WSPKLETISEYKIRFSPCRFIGLEWKEKE 207

[Close]

BLAST of CmoCh11G008910.1 vs. TrEMBL
Match: D7T157_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03470 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 118/208 (56.73%), Postives = 154/208 (74.04%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSF 60
           MGNA  SPC+   S      S+VKLVF +G TR+L GKH +AGEIMF FP+ M+CHADSF
Sbjct: 1   MGNAV-SPCFKQSS-----KSSVKLVFWEGTTRILTGKH-LAGEIMFEFPDRMVCHADSF 60

Query: 61  FIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAAL-GAQKAKTVKFSGPCPF 120
           FIG  +P+L  DD+LI  +TYF+LP+DLFA  +VL+ SSL+A   + K   +KFS  CP 
Sbjct: 61  FIGRVVPALAIDDELIPAQTYFVLPIDLFAC-NVLSASSLSAFTSSPKPSPIKFS-ECPL 120

Query: 121 EYVRNANGRVLIKVAPEFILRLISPADDGG----GGQFLCSTPELKKHYDQLVGSKGPVW 180
           EY++ +NGRV+IKV PEFI +LI+   + G       FLCSTPEL+KHY+QLVGSKG VW
Sbjct: 121 EYIKGSNGRVMIKVMPEFITKLITTGKEDGCSSPNNSFLCSTPELQKHYEQLVGSKGQVW 180

Query: 181 SPKLESISEYEIRHSPYKFVGFKLKQKE 204
           SPKLE+ISEY++R+SP +F+G + ++KE
Sbjct: 181 SPKLETISEYKLRYSPCRFIGLEWREKE 199

[Close]

BLAST of CmoCh11G008910.1 vs. TAIR10
Match: AT5G12340.1 (AT5G12340.1 unknown protein)

HSP 1 Score: 177.9 bits (450), Expect = 6.1e-45
Identity = 100/222 (45.05%), Postives = 136/222 (61.26%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGF-TRLLPG-KHHMAGEIMFRFPNTMICHAD 60
           MG +  + C+  I   RRR   V LVF +   T+ L G K H+AGEIMF FP+ ++CHAD
Sbjct: 1   MGRSLINSCFPII---RRRQGIVTLVFFEHVSTKTLCGFKKHVAGEIMFEFPDQIVCHAD 60

Query: 61  SFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGA------QKAKTVK 120
           SF+IG  IP+L  DD LI G+TYF+LP++ F  + +LTTS L+   +           + 
Sbjct: 61  SFYIGRQIPALAMDDYLIPGQTYFVLPIERF-QYKILTTSCLSIFNSNLENVRSNTPPLN 120

Query: 121 F---SGPCPFEYVRNANGRVLIKVAPEFILRLI--------SPADDGGGGQFLCSTPELK 180
           F   S P PFEY +  NG++LIKV+PEFI+ LI          A   G    +C++PELK
Sbjct: 121 FTAPSSPPPFEYSQGPNGKILIKVSPEFIISLICKNRNIREEEATSCGENSAICNSPELK 180

Query: 181 KHYDQLVGSKGPVWSPKLESISEYEIRHSPYKFVGFKLKQKE 204
           K YDQLVG++  +WSP L++ISE++IR SP +F G   KQ E
Sbjct: 181 KQYDQLVGTREHMWSPNLQTISEHKIRVSPLRFFGLNRKQDE 218

[Close]

BLAST of CmoCh11G008910.1 vs. TAIR10
Match: AT1G28190.1 (AT1G28190.1 unknown protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-15
Identity = 59/179 (32.96%), Postives = 86/179 (48.04%), Query Frame = 1


Query: 23  VKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTIPSLGTDDKLIAGETYF 82
           +KLV SDG  ++   +  +  E+   FP   IC +D  +IG   P L   + L  G  YF
Sbjct: 39  IKLVRSDGSLQVYD-RPVVVSELTKDFPKHKICRSDLLYIGQKTPVLSETETLKLGLNYF 98

Query: 83  ILPLDLFA---SFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANG-RVLIKVAPEFI 142
           +LP D F    SF  + T      G    K  +   P PF   +   G R+ I+V+ EF+
Sbjct: 99  LLPSDFFKNDLSFLTIATLKTPQNGGVLVKKTQ-QQPQPFLIQKGEKGERLRIRVSEEFV 158

Query: 143 LRLISPA----------DDGGGGQF---LCSTPELKKHYDQLVGSKGPVWSPKLESISE 185
             L+             ++ GGG+    +C+T +LKK Y QLVG +   W PKLE+I+E
Sbjct: 159 SELMMEGKKNRVNEEEEEEEGGGEGEGRVCTTVKLKKDYVQLVGLRR--WKPKLETITE 213

[Close]

BLAST of CmoCh11G008910.1 vs. NCBI nr
Match: gi|659098910|ref|XP_008450347.1| (PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo])

HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78
Identity = 152/213 (71.36%), Postives = 171/213 (80.28%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVS--RRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHAD 60
           MGNA  SPC +SIS+S  R R SAVKLVF+DG T+ L G HH AGEIMF+FP+ M+CHA+
Sbjct: 1   MGNAV-SPCLISISISLRRHRPSAVKLVFTDGPTKFLVGNHHFAGEIMFQFPDMMVCHAE 60

Query: 61  SFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCP 120
           SFFIGH IPSL  DD+L+ GETY +LP+D FAS DVL+TSSLA +GA      KFSGPCP
Sbjct: 61  SFFIGHPIPSLSIDDELLVGETYLVLPIDRFASVDVLSTSSLAMIGAGNMSAEKFSGPCP 120

Query: 121 FEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-K 180
           FEYVR  NGRVLIKV PEFI+RLISPA        GGGG FLCSTPELKKHYDQLVGS K
Sbjct: 121 FEYVRGTNGRVLIKVMPEFIVRLISPAAVDGGESGGGGGGFLCSTPELKKHYDQLVGSTK 180

Query: 181 GPVWSPKLESISEYEIRHSPYKFVGFKLKQKEG 205
           G VWSPKLE+ISEY+IR+SP +FVGFKLKQKEG
Sbjct: 181 GQVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of CmoCh11G008910.1 vs. NCBI nr
Match: gi|449442715|ref|XP_004139126.1| (PREDICTED: uncharacterized protein LOC101216872 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 5.2e-78
Identity = 152/213 (71.36%), Postives = 172/213 (80.75%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSR--RRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHAD 60
           MGNA  SPC +SIS+SR  RR S VKLVF++G T+ L G HH AGEIMF+FP+ M+CHA+
Sbjct: 1   MGNAV-SPCLLSISISRCHRRPSTVKLVFTNGPTKFLAGDHHFAGEIMFQFPDMMVCHAE 60

Query: 61  SFFIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCP 120
           SFFIGH IPSL  DD+LIAGETY ILP+D FAS DVL+TSSLA +GA      KFSGPCP
Sbjct: 61  SFFIGHPIPSLSIDDQLIAGETYLILPIDRFASVDVLSTSSLATIGAGNMSVEKFSGPCP 120

Query: 121 FEYVRNANGRVLIKVAPEFILRLISPA------DDGGGGQFLCSTPELKKHYDQLVGS-K 180
           FEYVR  NG+VLIKV PEFI+RLIS A       +GGGG FLCSTPELKKHYDQLVGS K
Sbjct: 121 FEYVRGTNGKVLIKVMPEFIVRLISQAAMDGGESEGGGGGFLCSTPELKKHYDQLVGSTK 180

Query: 181 GPVWSPKLESISEYEIRHSPYKFVGFKLKQKEG 205
           G VWSPKLE+ISEY+IR+SP +FVGFKLKQKEG
Sbjct: 181 GQVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of CmoCh11G008910.1 vs. NCBI nr
Match: gi|823129352|ref|XP_012447741.1| (PREDICTED: uncharacterized protein LOC105770917 [Gossypium raimondii])

HSP 1 Score: 236.1 bits (601), Expect = 5.4e-59
Identity = 123/205 (60.00%), Postives = 149/205 (72.68%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSF 60
           MGN+  SPC+          S+VKL+F +G TR+L GKH +AGE+MF FP+ M+CHADSF
Sbjct: 1   MGNSI-SPCF-----HPNPRSSVKLIFWEGNTRILTGKH-IAGEVMFEFPDKMVCHADSF 60

Query: 61  FIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAAL-GAQKAKTVKFSGPCPF 120
           FIGH IP LG DD L+ G+TYF+LPLD F   +VL+ SSLAAL  + K   + F G CPF
Sbjct: 61  FIGHPIPVLGIDDDLMPGQTYFVLPLDRFPCMNVLSASSLAALKSSPKPAPINF-GDCPF 120

Query: 121 EYVRNANGRVLIKVAPEFILRLI-SPADDGGGGQFLCSTPELKKHYDQLVGSKGPVWSPK 180
           EYV+ +NGRVLIKV PEFI  LI    ++G    FLCSTPELKKHYD LVGSK  VWSPK
Sbjct: 121 EYVKGSNGRVLIKVLPEFITSLIHGSKEEGSENSFLCSTPELKKHYDMLVGSKEQVWSPK 180

Query: 181 LESISEYEIRHSPYKFVGFKLKQKE 204
           LE+ISEY+IR SP +F+G + KQKE
Sbjct: 181 LETISEYKIRFSPCRFIGLEWKQKE 197

[Close]

BLAST of CmoCh11G008910.1 vs. NCBI nr
Match: gi|590584873|ref|XP_007015297.1| (Uncharacterized protein TCM_040942 [Theobroma cacao])

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58
Identity = 122/207 (58.94%), Postives = 152/207 (73.43%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSF 60
           MGN+  SPC+   S      S VKL+F +G TR+L GKH +AGE+MF FP+ M+CHADSF
Sbjct: 1   MGNSI-SPCFHPNS-----RSLVKLIFWEGNTRILTGKH-IAGEVMFEFPDRMVCHADSF 60

Query: 61  FIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFE 120
           FIGH IP+LG DD+L+ G+TYF+LPLD FA  +VL+ SSLAAL +    +    G CPFE
Sbjct: 61  FIGHPIPALGIDDELMPGQTYFVLPLDRFAC-NVLSASSLAALNSSPKPSPINFGDCPFE 120

Query: 121 YVRNANGRVLIKVAPEFILRLISPADD----GGGGQFLCSTPELKKHYDQLVGSKGPVWS 180
           Y++ +NGRVLIKV PEFI RLI+ + +      G  FLCSTPELKKHY+ LVGSK  VWS
Sbjct: 121 YIKGSNGRVLIKVVPEFITRLINRSREEEIGSPGNSFLCSTPELKKHYEMLVGSKEQVWS 180

Query: 181 PKLESISEYEIRHSPYKFVGFKLKQKE 204
           PKLE+ISEY+IR SP +F+G + KQKE
Sbjct: 181 PKLETISEYKIRFSPCRFIGLEWKQKE 199

[Close]

BLAST of CmoCh11G008910.1 vs. NCBI nr
Match: gi|1012362111|gb|KYP73294.1| (hypothetical protein KK1_005912 [Cajanus cajan])

HSP 1 Score: 233.0 bits (593), Expect = 4.6e-58
Identity = 117/209 (55.98%), Postives = 152/209 (72.73%), Query Frame = 1


Query: 1   MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSF 60
           MGNA  +PC+   + +   SS+V L+F +G TR L GKH +AGEIMF FP+ ++CHADSF
Sbjct: 1   MGNAIRTPCFQLHNTNSSSSSSVNLIFWEGTTRSLKGKH-IAGEIMFEFPDKIVCHADSF 60

Query: 61  FIGHTIPSLGTDDKLIAGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFE 120
           FIGH IP+L  DD+L+ G+TYF+LP+DLFA    L+ +S++ALG+   K+    G CPFE
Sbjct: 61  FIGHPIPALSIDDELMPGQTYFVLPIDLFAC-HTLSVASISALGSCPNKSPIKFGACPFE 120

Query: 121 YVRNANGRVLIKVAPEFILRLISPADD------GGGGQFLCSTPELKKHYDQLVGSKGPV 180
           Y++ +NGRVLIKV PEFI RLIS   +      G    FLCSTPEL+KHY+QLV SK  V
Sbjct: 121 YLKGSNGRVLIKVMPEFITRLISGDKENNIGPPGSPSSFLCSTPELQKHYEQLVKSKDQV 180

Query: 181 WSPKLESISEYEIRHSPYKFVGFKLKQKE 204
           WSPKLE+ISEY+IR SP +F+G + K+KE
Sbjct: 181 WSPKLETISEYKIRFSPCRFIGLEWKEKE 207

The following BLAST results are available for this feature:

BLAST of CmoCh11G008910.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G008910.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZV5_CUCSA	3.6e-78	71.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627480 PE=4 SV=1	[more]
A0A0D2N954_GOSRA	3.7e-59	60.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G134300 PE=4 SV=1	[more]
A0A061GTT2_THECC	1.1e-58	58.94	Uncharacterized protein OS=Theobroma cacao GN=TCM_040942 PE=4 SV=1	[more]
A0A151U210_CAJCA	3.2e-58	55.98	Uncharacterized protein OS=Cajanus cajan GN=KK1_005912 PE=4 SV=1	[more]
D7T157_VITVI	1.6e-57	56.73	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03470 PE=4 SV=...	[more]

BLAST of CmoCh11G008910.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12340.1	6.1e-45	45.05	unknown protein	[more]
AT1G28190.1	3.0e-15	32.96	unknown protein	[more]

BLAST of CmoCh11G008910.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098910\|ref\|XP_008450347.1\|	1.0e-78	71.36	PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]	[more]
gi\|449442715\|ref\|XP_004139126.1\|	5.2e-78	71.36	PREDICTED: uncharacterized protein LOC101216872 [Cucumis sativus]	[more]
gi\|823129352\|ref\|XP_012447741.1\|	5.4e-59	60.00	PREDICTED: uncharacterized protein LOC105770917 [Gossypium raimondii]	[more]
gi\|590584873\|ref\|XP_007015297.1\|	1.6e-58	58.94	Uncharacterized protein TCM_040942 [Theobroma cacao]	[more]
gi\|1012362111\|gb\|KYP73294.1\|	4.6e-58	55.98	hypothetical protein KK1_005912 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh11G008910	CmoCh11G008910	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh11G008910.1	CmoCh11G008910.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G008910.1.exon.1	CmoCh11G008910.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G008910.1.CDS.1	CmoCh11G008910.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..184 score: 2.4
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 4..203 score: 2.2
None	No IPR available	PANTHER	PTHR33052:SF4	SUBFAMILY NOT NAMED	coord: 4..203 score: 2.2