CmoCh11G001910.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh11G001910.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr11 : 935140 .. 940344 (-)
Sequence length381
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GACGGCGCGAAGTTCATGGCAGCGCGCGAGCGAAAGCGGCTACAGGATACTTGTTCGCATTTTTTACGATCTTGGAGAGCGCGGCATGGCCGAGATCAAGGCCACACACATCGGCCAGACGCACCAAATACAGCAACACATCGGATAGCTCTTCTTCCAAATGCTCTCTCTCCGCCGCGCTCCAGTTCGGCAGCCCCCTTTCCACCTCCCCCTTCCACTGGAATATCTCCGATAGCTCTCCGACTTCGCCAACCTGCAAGGAATTGCAATTCATTAATCGAAAAGAGCAACATGTAAGATTCAGATTATTCCTCGTATATGTACTGATTTTGTTTGTTTTTAGGTCGAAATTGGAGATTGAGAAGTTAACTTCAATGTGTTTTTTGTTTGATTAATTACAAGTGCTAGGAGCAGGTTTCTAGGGCTGTGGTATTGTTCCCATCCTCGCACTTGAGCGAACTCTGCGAGCCTGTCCCTGAGTTCATGCAGTGAGACGTCTTTGGCGGTTTTCTCAGGTTCGTAAGAACGACTCTCCATTTCTCTCTCTCTGTGATCTGTTTTTCTCTGCTTGTGGTTGTGACCTCTGTGTTCGGTTGGGCGGTAAATTTATAGAAGTCAGTTTAGGGCAGAGAGAGAGGAGAGATAGGGAAGAATTTGATGATGATAGTGGGATGTGCACTTGAGGTGTTTGATAAAAAGATAAAACAGTAATTAAGGCATGTGAAGTGTGGGCAAGCTTGTCTCCATCTTTCCATTCATGGCTTCAAATCACCTATCTGCTGCTACACCTCATGCCTTGCCATGTCTCTCCACTTCTCTATACCTCAACTTCTTTCAACATTTTGAATTTGAAGGTTGTGCGACTTTTGGACCCTTGTTCCTACTTCAATTATATGTTTCTACTGTGTTAGTGTAGGTTCTTTAAGCTATATTTGAGAGTACTCTTAACCGGGTGGGCTTAATATGTCTTTTTGTCGAGCTAAAGCTGCTTTTTCTTCTCAAAATTAAGACAGTAAAAGATAACTTTGATAGCTGAAAAGGCACATGCAGAATAGTGTTTTTGGACAAGTGTTTGAGGTAGCTTTCATAACACTTTTAAACTCTGAAGACTCTTTAGATAACGATTCCACTTCCTGTTTCTTCTTTTATATAATATTTATGAACAAATGAGAAATTAGTCGAGGGGTAGTTCTTTTCCACCCTTATGATTCAAGATTAGTTTAGTTTTTTCTTAAAAAATTTATAACCCAGTTGTCTCAACTTCATCAATAATCAAGACAGAAAAAGGAATTGTTGTGAAGGGCGGAGGGAGAGAAACTGAGGGTGTAGGCACGTTATACAAATCCCGGAAATTGCGATGGAAGTTGGGGAAATTTATGACAAATCTTGTTCCATTTCCCCTTTTCCCAGCACCTAAACGCCCATTCTTTTCTTCCATTTCAACATCCTCTATCTCCCCAGCCATTCCCTCTACTTCTTTTTATTTCTTTTTCTTCTATTCTTTCTTTCTTTTCTGGTCAAAAGAAACTAGGAGTTTCAAAAAGTGGATAATAAATTAATTCACGATAGAGCTTACCCTTGAAAAGTTCTAAAAGTTCTATTAGTTTCTTAGTGTTTAACAAGCTTCTAAATACATTGTGTTTAAGAAATCATTGAATTTTAAAAGTTCCTAAACATCTGTTTGGTCCTTAAGATTTCATGTGTAGTATGTTTCCAACCTTTAATTTTATGTTATATAACGATTTATGTTTTATAAATCTAGAATATTTAACGAGATCTATTGGAAATAAAATTGAGAGTTCAATAGTGTATTAGACACTAAGTTGAAAGTCTAGAGACTTATTTGATACTTTTTATGGTTCAAAGATTCATAGATAAAGGGGTATGGTTGTATAGCGACTATGATAGTCTCACAAGTATAAGTCTATCCAAGAGAATAGGAAATTATGGAAGGAGAAGAAGGTAGGGGGATTTCTGTTCACCTCATGAAGTAGAAACTAAGCTGCTTACGAGCTAAGGGTTGCCCCTAGGCCATGAAAGCTATTCAAATAGCTTGGTGTAAAGTATCTGGTTTGGATTACTCAACTTCAAAAGTTGCTTTTAAGAAAATTATAAAAGAAAGGAAAAGAAAAAGACAAAAACATTGTAGAGAACAGAGTTAAATGGTTGATGATTGCAATGGAGAAAAGGAAAGTTGAGAGGAAATGGTACAGATTATGTGTATGAAAATGGGCAACCAATTATTGCTTCTAGAGCTATGTGGTTCTTTTGATTGAAAATTAGTTGCACCAAACACTTCAATTCTTGATTTTTTTTTCCCTTTAATCACTCCTTATCTTCCTAATCTCCTTCCCTCTCTAGCTCATTTTGTCTCTAGCTTAGGCCACATCCAATTATGGAAACGGCAAGCAATGTTCATAAAATTTTATTTGCCTATCTTAATTATTACTTGCCAATTGCTATAAAAGTTTCTTTTTGCAATTGACATCATTTTCCTCCTGAAAAAAGATGACAAATTGTACAAATAAATAAAAATGAACATACCCTTCAAGTAGCACTTTGTCTTTTTAGTTTCAATAGTACCTTTAAACCTTAAAAAAATAAAAGAAAAAAACCTCAAAAATACCCTTAAATTTAAAAAAAAAAACTAAAAAATACATTGATGATTAGTTTTAGTTGGCATGAAAATAGTTGATACATGTTTTAAAAACACTTTTTATCTTTAAAAAAAAAAAAAATTCAAAAATACTCTTTTAACTTTCAAAAGCGTTTAAAAATATCCTCGAGTTTTCAAAAGTTTTCTTAATACCTTAAACCTTTTTAAAAACTTGAAAAACACCTTAAAGTTTTTAAAAACTTCAAAAAAATCCTATGGTTAGTACAATGTTTCAAAATATTAATGAACTTTCAAAAGTAACATTAAAAAGAAAATAATCTATAAGGTATCTATAGACGATTTTTGTCTATATATCGACGATAAATTTTTTTTTTGAATTTTTTTATGAAGGTCGAAGGTGTGAATGCTATCTTTAAAATTTTATGGGTATTTTTCAAACATAATACGAACTAAGGATGTTTTTCAATTTTTTTAAATAGGTGAAGGATATTAATTAAACTTTTTAAAGTTTCAAGTTATTTTTGAAACATTACTAAAAGTTCAATAGTATTTTTTAAACATAACACTGACCGTCTCCATTCAAAATTAATGGCAAGAGTTTTTTTGGGACATTTTAAAAAGTTTATTATTGAAACTTTTGAAAATTTATAAGTATTTTTTAAACAAATTACAAGGATAATTTAATTAATTAGTTAATTAATTTACTTTGGATCTTTTTTTCCTTTTTTAACCTTTTCAATGTCTTGCTTCACTTTTATTCTTCTGTGACTTCTCATATCTTATTTCTCAACTTTATAAACAAATTTTAGGAGTTTGTTTGTGATTTATGTTATATAGATTAGAGGAACTCTCTTCAATTTTCAAATTGAGGGTTGTGTTATTTTGTTACGTAATATGCATAATTGTAAATATTAAATTTCAAACTAAGAAGGTTGAAATTAACGAACAATGAGTGAGGAAAAAGAAAAAGAAAAAGAAAAAAAAGATCGTCCTTCTTGCATTATTCCATTCCACAACAAGTGATCTTTTTATGTTTTTTAGTTTCTTTTTTCAACTTTAGGATAATTTTTTTTCTTTTTCCTTTTCTTTTTAGTCACATCTCAATTAGGATTCAAGGCAGCAATGATTTACATATTTCCCACTCGGTCTTTAATAAACAAAATAGATTCGCTATAAGAATAAATAATCTAAGGCTAAATTAATAAAAAAAATATTCTTAAATTTTGCACTTTTGTCTCAAAAATATCAAAGGATAAAGTGTATTAAAAAAGTGAGAAAAAAATGAGGAATTGGTCCTAATAGATGGAGGAGAGAGAGAAGAAATCAAGGAGAGAGGTGGTGTATGAAGTATGGAGAATTGGTTTTTGTTTATATAGCAACGATAATAAATTATATTTTTTAAAAAATTAAGTGTATCAATATTCACTCTCTAATACTTACGTTCACACTTACCATAATCCATCAAGAATTGATATCAAAACCTTATGGTAAGTGCATGTACAGAAGTTCACTACTATAAGAGATTTGTGGTTGTCTTGTCTGATTTATAAGTCTAACTTTATTTCTAACGTGAAAAAGATCATTTTTTATTATTTTGATCTAAGAACAAGAATTTACATATAGATGCATGTATATCTACTTTCTTGATGTGACAAATTACTTCAAAAGTTTTAGTATGTTATAGTGTGTGTTTGCATAGGTAAGGAAGAACTCTTATTAAACCAACTTGCCTTACAACTCTTATTAAACCAACTTGGGAAACGTTTTTATCTTTTTATTGACATTTTGTAAATGATGAATGCTTTTGTTTCCAAGATGATTGGCAATGATTGGCAATAAATTAAAGTGTGTAGGTATCCATATCTTATGCCTATGAAAGTATGAACAACTTTAGGTTATTCACATTTCTTCAACCAAAATCTTCATCACAAGGATGGAGAGGAGAAGCTATAGCTAATTTCATCTCCTCTTATGCCTTTTATGTTGATCAACATAGCTAGAACTTCATTTGGCCTTGCTGGTGTTGCTTAGTGCACTTCACCCGGATCTTGAGAAGTTCACACATCTCATCGACCTCCTCAACGAGGCCTGATCTCAAAACTTCAATTGGTACCATTCCCTACTCAACCCTTGTCTTCCTTTTCCCATCTCCCTTTTGGTGCATTCGACTAGACACTCTTCCCCTTCGTTGAGTGCTCGTCTTGCGACAAGTTTCATTGTCAAAACTTCAAAACTTCAAAACTATATACATTGCCTTTTATCGTAGCTTTTCATGTTTGTCCATACTCGGCTGCAACATAACCAATGGTTTCAGCCAACATGGTATTCACATGGCTGTCTATCATGTCTATAATTCTAGTCAAGCCCAAGTCTGTCACCTGTCTTGACTATCTTTATCGAGCAGAATATTACTGGCCTTAACATCATGATGTAAAACAAAAAGAAAACATTCATGGTGAGGATAGACCAGTGCTCGTGCCACATCAATTGCAAGATCAATGTGTTGTTGCCAGTTTAATTTGACTTGGTCCAGTTTGGGATCCTCCAAGTTCCTCCTTCCAGTATTCATCTACCAAAATCTTGTTTGA

mRNA sequence

GACGGCGCGAAGTTCATGGCAGCGCGCGAGCGAAAGCGGCTACAGGATACTTGTTCGCATTTTTTACGATCTTGGAGAGCGCGGCATGGCCGAGATCAAGGCCACACACATCGGCCAGACGCACCAAATACAGCAACACATCGGATAGCTCTTCTTCCAAATGCTCTCTCTCCGCCGCGCTCCAGTTCGGCAGCCCCCTTTCCACCTCCCCCTTCCACTGGAATATCTCCGATAGCTCTCCGACTTCGCCAACCTGCAAGGAATTGCAATTCATTAATCGAAAAGAGCAACATGTCGAAATTGGAGATTGAGAAGTTAACTTCAATTTTGGGATCCTCCAAGTTCCTCCTTCCAGTATTCATCTACCAAAATCTTGTTTGA

Coding sequence (CDS)

ATGGCAGCGCGCGAGCGAAAGCGGCTACAGGATACTTGTTCGCATTTTTTACGATCTTGGAGAGCGCGGCATGGCCGAGATCAAGGCCACACACATCGGCCAGACGCACCAAATACAGCAACACATCGGATAGCTCTTCTTCCAAATGCTCTCTCTCCGCCGCGCTCCAGTTCGGCAGCCCCCTTTCCACCTCCCCCTTCCACTGGAATATCTCCGATAGCTCTCCGACTTCGCCAACCTGCAAGGAATTGCAATTCATTAATCGAAAAGAGCAACATGTCGAAATTGGAGATTGAGAAGTTAACTTCAATTTTGGGATCCTCCAAGTTCCTCCTTCCAGTATTCATCTACCAAAATCTTGTTTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh11G001910CmoCh11G001910gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh11G001910.1CmoCh11G001910.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh11G001910.1.CDS.3CmoCh11G001910.1.CDS.3CDS
CmoCh11G001910.1.CDS.2CmoCh11G001910.1.CDS.2CDS
CmoCh11G001910.1.CDS.1CmoCh11G001910.1.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh11G001910.1.five_prime_UTR.1CmoCh11G001910.1.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh11G001910.1.exon.3CmoCh11G001910.1.exon.3exon
CmoCh11G001910.1.exon.2CmoCh11G001910.1.exon.2exon
CmoCh11G001910.1.exon.1CmoCh11G001910.1.exon.1exon