CmoCh10G005250.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G005250.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Stress induced protein
Location	Cmo_Chr10 : 2388571 .. 2389790 (-)
Sequence length	525

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCCATCCAACCAGACCACGGGAACAGGATGACCTTCAGGACATCGACGAGGCCGTTCCCTCAAATGGGTGTGGCTGTTTTCGGCTATTCGGGTTCAATCGGAACGGTAATTACGAAGGTAGAAGTCTTCTGCAGCGGCAACAGGGCTGGGAAGAGGAGTCTTGGATGGTGAGGAAATTGAAGAAGTTGAAGGAGGTTTCAGAAATGGTGGGTGGACCCAGATGGAAGAACTTCATCAGAAAAATGGGTGGCTTTTTTAAGAGGAAAAAACAGAGGAAAAACAGGTTTCAGTATGACCCTGAAAGCTATGCTCTCAATTTCGACGACGGTTTCGATGGGGAAGGCGACGATCATCACCCGCCAATTGCCTTTTCTACGAGGTTTTCTGTTCCTTTGGCTTCAAGTGATTGTTGATGCAAATATACCTCGAAATGGGAATCCTTTCCCATTTCTAAAATATCATATGGTGTTATATAACCAATTTGAACATAATTCAACCACTTAAGACATGTTCTCCCATATCGGGCGAGCGAGAACAGAATTTGAGAATTTTTACCGTTCCAATTTCTGCCCCACGAGATTACTAAAGAGGGTGATTGAGGTCTGAAACTTAATATGAAAATATTAGTTTACGTCTAAATCACCCACCCGTGTTTATTAATTAATTTAAATAAAACGTAATTAAATTAGTTTTTATTAATATTAAAATTATTTAAATGATTCACACGTAATTATTTTTATTTAATTTATTGAAAGTTAACAATGAAGAAAAGTGAATATTAGTAATGAGCTACAAGTAGGGGTTTTGGAATTTGGAGGGGACATAATGGTCATTTGGAGAGATTGGCCACGACTTCTAGACTTCGCCCTCACCAGTCACCGTTGCATAAACACGCCGGGAAAGATCCAAATCCTTCTCGCATTGCAATACTGAATTGTCAACTATTTCTCGATTTGAGAACTCGCGGTATAGGCAGCTACAGCCGCGAATTTCCTTCCTCCGCCGGAGATCGTCCTTCCAGTTTTCTATGTCTCAGGTCAGTGAAGTTCATTCTTTCGTTCGTTCCTGGATTTTCATCCCTTATTCTCTTATTTCATGTTGGAAATTATATGTTATGTGAATTTCCTTGTTTGGTTTTCGGTGAAATTAAGAGATGGCGTAATTTTTTTACTGTTCTGTTATCTACTTTTTGATGTGATTCTTCTAGATCTGA

mRNA sequence

ATGGCGACCCATCCAACCAGACCACGGGAACAGGATGACCTTCAGGACATCGACGAGGCCGTTCCCTCAAATGGGTGTGGCTGTTTTCGGCTATTCGGGTTCAATCGGAACGGTAATTACGAAGGTAGAAGTCTTCTGCAGCGGCAACAGGGCTGGGAAGAGGAGTCTTGGATGGTGAGGAAATTGAAGAAGTTGAAGGAGGTTTCAGAAATGGTGGGTGGACCCAGATGGAAGAACTTCATCAGAAAAATGGGTGGCTTTTTTAAGAGGAAAAAACAGAGGAAAAACAGGTTTCAGTATGACCCTGAAAGCTATGCTCTCAATTTCGACGACGGTTTCGATGGGGAAGGCGACGATCATCACCCGCCAATTGCCTTTTCTACGAGATCCAAATCCTTCTCGCATTGCAATACTGAATTGTCAACTATTTCTCGATTTGAGAACTCGCGGTATAGGCAGCTACAGCCGCGAATTTCCTTCCTCCGCCGGAGATCGTCCTTCCAGTTTTCTATGTCTCAGATCTGA

Coding sequence (CDS)

ATGGCGACCCATCCAACCAGACCACGGGAACAGGATGACCTTCAGGACATCGACGAGGCCGTTCCCTCAAATGGGTGTGGCTGTTTTCGGCTATTCGGGTTCAATCGGAACGGTAATTACGAAGGTAGAAGTCTTCTGCAGCGGCAACAGGGCTGGGAAGAGGAGTCTTGGATGGTGAGGAAATTGAAGAAGTTGAAGGAGGTTTCAGAAATGGTGGGTGGACCCAGATGGAAGAACTTCATCAGAAAAATGGGTGGCTTTTTTAAGAGGAAAAAACAGAGGAAAAACAGGTTTCAGTATGACCCTGAAAGCTATGCTCTCAATTTCGACGACGGTTTCGATGGGGAAGGCGACGATCATCACCCGCCAATTGCCTTTTCTACGAGATCCAAATCCTTCTCGCATTGCAATACTGAATTGTCAACTATTTCTCGATTTGAGAACTCGCGGTATAGGCAGCTACAGCCGCGAATTTCCTTCCTCCGCCGGAGATCGTCCTTCCAGTTTTCTATGTCTCAGATCTGA

Homology

[Close]

BLAST of CmoCh10G005250.1 vs. TrEMBL
Match: A0A0A0LTG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G265630 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-49
Identity = 100/140 (71.43%), Postives = 116/140 (82.86%), Query Frame = 1


Query: 1   MATHPTRPR---------EQDDLQDIDEAVPSNGCGCFRLFGF--NRNGNYEGRSLLQRQ 60
           MATH TRP          +QDDLQDID+++ SNGCGCF+LFGF  NRN NYEG +LLQ++
Sbjct: 1   MATHQTRPPSTPYSPLTDQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGGNLLQQK 60

Query: 61  QGWEEESWMVRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNF 120
           QG EEESWMV++LKK++EVSEMV GP+WKNFIRKMGG+ K KK+R NRFQYDPESYALNF
Sbjct: 61  QGREEESWMVKRLKKVREVSEMVAGPKWKNFIRKMGGYLKGKKER-NRFQYDPESYALNF 120

Query: 121 DDGFDGEGDDHHPPIAFSTR 130
           D GFDGE DDHHPPI FS+R
Sbjct: 121 DGGFDGEEDDHHPPIGFSSR 139

[Close]

BLAST of CmoCh10G005250.1 vs. TrEMBL
Match: A0A0L9TR11_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g249200 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 1


Query: 1   MATHPTRPREQDDLQDIDEAVPSN-GCGCFRLFGFNR---NGNYEGRSLLQRQQGWEEES 60
           MA+H  RP E   ++D DEA  S  GCGCFR F   +    G+ EG+ LL  Q G E ES
Sbjct: 1   MASHEARPLE---MEDFDEASSSGCGCGCFRGFDLKKWWGEGDEEGKGLLDEQSG-EGES 60

Query: 61  WMVRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNFDDGFDGE 120
           W+V KL+K KE SE++ GP+WK FIRK+ G+ K+ KQ++NRFQYD  SY LNF+ G   +
Sbjct: 61  WVVEKLRKAKEASEVIAGPKWKTFIRKISGYGKKMKQQRNRFQYDEHSYNLNFNSG--AQ 120

Query: 121 GDDHHPPIAFSTR 130
            +D   P +FS R
Sbjct: 121 SEDEAMPYSFSAR 127

[Close]

BLAST of CmoCh10G005250.1 vs. TrEMBL
Match: A0A0S3R6U5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G421700 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-24
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 1


Query: 1   MATHPTRPREQDDLQDIDEAVPSN-GCGCFRLFGFNR---NGNYEGRSLLQRQQGWEEES 60
           MA+H  RP E   ++D DEA  S  GCGCFR F   +    G+ EG+ LL  Q G E ES
Sbjct: 1   MASHEARPLE---MEDFDEASSSGCGCGCFRGFDLKKWWGEGDEEGKGLLDEQSG-EGES 60

Query: 61  WMVRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNFDDGFDGE 120
           W+V KL+K KE SE++ GP+WK FIRK+ G+ K+ KQ++NRFQYD  SY LNF+ G   +
Sbjct: 61  WVVEKLRKAKEASEVIAGPKWKTFIRKISGYGKKMKQQRNRFQYDEHSYNLNFNSG--AQ 120

Query: 121 GDDHHPPIAFSTR 130
            +D   P +FS R
Sbjct: 121 SEDEAMPYSFSAR 127

[Close]

BLAST of CmoCh10G005250.1 vs. TrEMBL
Match: C1K028_VITVI (Stress induced protein OS=Vitis vinifera GN=SIUP1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.8e-23
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 1


Query: 10  EQDDLQDIDEAVPSNGCGC--FRLFGFNRNGNYEGRS--LLQRQQGWEEESWMVRKLKKL 69
           E+ +L +  + V ++GCGC  FRLFGFN   +++      L + +G    +W V+KLKK 
Sbjct: 28  ERGNLYEYQDPVSADGCGCGCFRLFGFNSGWSHDNNEDGHLFQARGERINTWWVKKLKKA 87

Query: 70  KEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNFDDG--FDGEGD 119
           KE SE++ GP+WKNFIRK+GG+F  K ++KNRFQYD ESYALNFDDG  FD E D
Sbjct: 88  KEFSEVLAGPKWKNFIRKLGGYFNNKNKKKNRFQYDAESYALNFDDGGDFDTEED 142

[Close]

BLAST of CmoCh10G005250.1 vs. TrEMBL
Match: A0A061GP65_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_038268 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-22
Identity = 59/117 (50.43%), Postives = 74/117 (63.25%), Query Frame = 1


Query: 4   HPTRPREQDDLQDIDEAVPSNGCGCFRLFGFN-RNGNYEGRSLLQRQQGWEEESWMVRKL 63
           H   P + +D+ D +E V   GC  F LF    R  + E    L  Q+G   ++W   KL
Sbjct: 12  HKHSPLQGEDVDDHEEEVWDKGCDWFSLFCLKWRRNDIEETDSLVHQRGEPTQTWWKSKL 71

Query: 64  KKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNFDDGFDGEGDD 120
           KK+KEVSE + GP+WKNFIRKM G+  +++ RKNRFQYD  SYALNFDDG D EGDD
Sbjct: 72  KKVKEVSEKLAGPKWKNFIRKMSGYCNKRRTRKNRFQYDSYSYALNFDDGADKEGDD 128

[Close]

BLAST of CmoCh10G005250.1 vs. TAIR10
Match: AT5G25240.1 (AT5G25240.1 unknown protein)

HSP 1 Score: 77.4 bits (189), Expect = 9.6e-15
Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 1


Query: 16  DIDEAVPSNGCGCFRLFGFNR--NGNYEGRSLLQRQQGW----EEE---SWMVRKLKKLK 75
           D +E     GCG FR F F R   G+ E RS    + GW    +EE   +W   KLK LK
Sbjct: 12  DYEETAAFCGCGYFRSFSFTRWRRGDDESRS----RGGWSGCLQEERRGNWGSEKLKGLK 71

Query: 76  EVSEMVGGPRWKNFIRKMGGFFKRKKQRKN-RFQYDPESYALNFDDGFDGEGDDHHP 123
           E+SE + GP+WKNFIR       RKK R++  F YD ++Y+LNFDDG  G+G D  P
Sbjct: 72  EISEKIAGPKWKNFIRSFSS--GRKKMRRDVDFTYDLKNYSLNFDDG--GDGKDSSP 120

[Close]

BLAST of CmoCh10G005250.1 vs. TAIR10
Match: AT5G62865.1 (AT5G62865.1 unknown protein)

HSP 1 Score: 58.2 bits (139), Expect = 6.0e-09
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 1


Query: 26  CGCFRLFGFNRNGNYEGRSLLQRQQG----------WEEESWMVRKLKKLKEVSEMVGGP 85
           C CF  F  +R+    G S   R +            +E  W +R   K++E SE+V GP
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWWIRASLKIREWSEIVAGP 79

Query: 86  RWKNFIRKMGGFFKRKK--QRKNRFQYDPESYALNFDDGFDGEGDDH 121
           RWK FIR+     +R +      +FQYDP SY+LNFDD  D E D++
Sbjct: 80  RWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDD--DDEEDEY 124

[Close]

BLAST of CmoCh10G005250.1 vs. TAIR10
Match: AT3G01430.1 (AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1))

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-08
Identity = 33/98 (33.67%), Postives = 48/98 (48.98%), Query Frame = 1


Query: 54  EESWMVRKLKKLKEVSEMVGGPRWKNFIRKMG---------------------GFFKRKK 113
           +E W +R  ++++E SE+V GPRWK +IR+ G                     G    + 
Sbjct: 60  DERWWIRGWRRMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRS 119

Query: 114 QRKNRFQYDPESYALNFDDGFD-GEGDDHHPPIAFSTR 130
             + +F+YD  SY+LNFDDG   G  DD  P   +S R
Sbjct: 120 SDQGKFRYDQLSYSLNFDDGNQTGHFDDEFPYRDYSMR 157

[Close]

BLAST of CmoCh10G005250.1 vs. TAIR10
Match: AT3G48020.1 (AT3G48020.1 unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1


Query: 53  EEESWMVRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQR------KNRFQYDPESYA 112
           +E  W VR   K++E SE+V GPRWK FIR+    F R  +R       ++F+YDP SY 
Sbjct: 34  QEPRWWVRAFLKIREWSEIVAGPRWKTFIRR----FNRDPRRGQDWDDSDKFRYDPVSYT 93

Query: 113 LNFDDGFDGEGDD 120
           L+F+D  D + DD
Sbjct: 94  LSFEDE-DKDDDD 101

[Close]

BLAST of CmoCh10G005250.1 vs. TAIR10
Match: AT5G14890.1 (AT5G14890.1 NHL domain-containing protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 47/136 (34.56%), Postives = 64/136 (47.06%), Query Frame = 1


Query: 10  EQDDLQDIDEAV-PSNGCGCFRL--FGFNRNGNYEGRSLLQRQQGWE----EESWMVRKL 69
           E D   ++ EA+    GC CF L   G ++     G    QR +  +    +E W V   
Sbjct: 593 EMDATDEMHEAMFAKRGC-CFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSGW 652

Query: 70  KKLKEVSEMVGGPRWKNFIRKMG------GFFKRKKQRKNR--FQYDPESYALNFDDGFD 129
            K++E SE+V GP+WK FIR+ G      G       R     F+YD  SY+LNFDDG  
Sbjct: 653 MKMREWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDGKQ 712

[Close]

BLAST of CmoCh10G005250.1 vs. NCBI nr
Match: gi|659086372|ref|XP_008443900.1| (PREDICTED: uncharacterized protein LOC103487383 [Cucumis melo])

HSP 1 Score: 205.3 bits (521), Expect = 8.7e-50
Identity = 102/141 (72.34%), Postives = 117/141 (82.98%), Query Frame = 1


Query: 1   MATHPTRP----------REQDDLQDIDEAVPSNGCGCFRLFGF--NRNGNYEGRSLLQR 60
           MA+H TRP          ++QDDLQDID+++ SNGCGCF+LFGF  NRN NYEG +LLQ+
Sbjct: 1   MASHQTRPPSTPYSPLNDQQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGANLLQQ 60

Query: 61  QQGWEEESWMVRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALN 120
           +QG EEESWMV+KLKK+KEVSEMV GP+WKNFIRKMGG+ K KKQR NRFQYDPESYALN
Sbjct: 61  KQGREEESWMVKKLKKVKEVSEMVAGPKWKNFIRKMGGYLKGKKQR-NRFQYDPESYALN 120

Query: 121 FDDGFDGEGDDHHPPIAFSTR 130
           FD GFDGE DDHHPPI FS+R
Sbjct: 121 FDGGFDGEEDDHHPPIGFSSR 140

[Close]

BLAST of CmoCh10G005250.1 vs. NCBI nr
Match: gi|778665054|ref|XP_011648475.1| (PREDICTED: uncharacterized protein LOC105434480 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 7.3e-49
Identity = 100/140 (71.43%), Postives = 116/140 (82.86%), Query Frame = 1


Query: 1   MATHPTRPR---------EQDDLQDIDEAVPSNGCGCFRLFGF--NRNGNYEGRSLLQRQ 60
           MATH TRP          +QDDLQDID+++ SNGCGCF+LFGF  NRN NYEG +LLQ++
Sbjct: 1   MATHQTRPPSTPYSPLTDQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGGNLLQQK 60

Query: 61  QGWEEESWMVRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNF 120
           QG EEESWMV++LKK++EVSEMV GP+WKNFIRKMGG+ K KK+R NRFQYDPESYALNF
Sbjct: 61  QGREEESWMVKRLKKVREVSEMVAGPKWKNFIRKMGGYLKGKKER-NRFQYDPESYALNF 120

Query: 121 DDGFDGEGDDHHPPIAFSTR 130
           D GFDGE DDHHPPI FS+R
Sbjct: 121 DGGFDGEEDDHHPPIGFSSR 139

[Close]

BLAST of CmoCh10G005250.1 vs. NCBI nr
Match: gi|920688953|gb|KOM32936.1| (hypothetical protein LR48_Vigan01g249200 [Vigna angularis])

HSP 1 Score: 120.2 bits (300), Expect = 3.7e-24
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 1


Query: 1   MATHPTRPREQDDLQDIDEAVPSN-GCGCFRLFGFNR---NGNYEGRSLLQRQQGWEEES 60
           MA+H  RP E   ++D DEA  S  GCGCFR F   +    G+ EG+ LL  Q G E ES
Sbjct: 1   MASHEARPLE---MEDFDEASSSGCGCGCFRGFDLKKWWGEGDEEGKGLLDEQSG-EGES 60

Query: 61  WMVRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNFDDGFDGE 120
           W+V KL+K KE SE++ GP+WK FIRK+ G+ K+ KQ++NRFQYD  SY LNF+ G   +
Sbjct: 61  WVVEKLRKAKEASEVIAGPKWKTFIRKISGYGKKMKQQRNRFQYDEHSYNLNFNSG--AQ 120

Query: 121 GDDHHPPIAFSTR 130
            +D   P +FS R
Sbjct: 121 SEDEAMPYSFSAR 127

[Close]

BLAST of CmoCh10G005250.1 vs. NCBI nr
Match: gi|526118281|ref|NP_001267984.1| (stress induced protein [Vitis vinifera])

HSP 1 Score: 115.9 bits (289), Expect = 6.9e-23
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = 1


Query: 10  EQDDLQDIDEAVPSNGCGC--FRLFGFNRNGNYEGRS--LLQRQQGWEEESWMVRKLKKL 69
           E+ +L +  + V ++GCGC  FRLFGFN   +++      L + +G    +W V+KLKK 
Sbjct: 28  ERGNLYEYQDPVSADGCGCGCFRLFGFNSGWSHDNNEDGHLFQARGERINTWWVKKLKKA 87

Query: 70  KEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNFDDG--FDGEGD 119
           KE SE++ GP+WKNFIRK+GG+F  K ++KNRFQYD ESYALNFDDG  FD E D
Sbjct: 88  KEFSEVLAGPKWKNFIRKLGGYFNNKNKKKNRFQYDAESYALNFDDGGDFDTEED 142

[Close]

BLAST of CmoCh10G005250.1 vs. NCBI nr
Match: gi|703135768|ref|XP_010105979.1| (hypothetical protein L484_007613 [Morus notabilis])

HSP 1 Score: 113.2 bits (282), Expect = 4.5e-22
Identity = 60/134 (44.78%), Postives = 86/134 (64.18%), Query Frame = 1


Query: 1   MATHPTRP--REQDDLQDIDEAVPSNGCGCFRLFGFNRNGNYEGRSLLQRQQGWEEESWM 60
           M T   +P  +E++ + D +++  S GCGCF   GF R  N E      ++Q  +E +W 
Sbjct: 1   MVTPMEKPVLKEENHIHDYEDSGSSTGCGCFWFLGFKRPRNNENGG--DKRQVRKETTWW 60

Query: 61  VRKLKKLKEVSEMVGGPRWKNFIRKMGGFFKRKKQRKNRFQYDPESYALNFDDGFDG--- 120
           V+K+ K+KE+SE+V GP+WK FIRK+GG+ K KKQ+  RFQYDP+SYALNFD G D    
Sbjct: 61  VKKMNKVKELSEVVAGPKWKTFIRKVGGYCKGKKQKNTRFQYDPQSYALNFDCGVDAAEE 120

Query: 121 EGDDHHPPIAFSTR 130
           E ++  P +  S+R
Sbjct: 121 EEEEDGPLLDISSR 132

The following BLAST results are available for this feature:

BLAST of CmoCh10G005250.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh10G005250.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTG0_CUCSA	5.1e-49	71.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G265630 PE=4 SV=1	[more]
A0A0L9TR11_PHAAN	2.6e-24	49.62	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g249200 PE=4 SV=1	[more]
A0A0S3R6U5_PHAAN	2.6e-24	49.62	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G421700 PE=...	[more]
C1K028_VITVI	4.8e-23	52.17	Stress induced protein OS=Vitis vinifera GN=SIUP1 PE=2 SV=1	[more]
A0A061GP65_THECC	3.1e-22	50.43	Uncharacterized protein OS=Theobroma cacao GN=TCM_038268 PE=4 SV=1	[more]

BLAST of CmoCh10G005250.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25240.1	9.6e-15	45.30	unknown protein	[more]
AT5G62865.1	6.0e-09	37.38	unknown protein	[more]
AT3G01430.1	3.9e-08	33.67	BEST Arabidopsis thaliana protein match is: NHL domain-containing pr...	[more]
AT3G48020.1	1.1e-07	43.84	unknown protein	[more]
AT5G14890.1	1.6e-06	34.56	NHL domain-containing protein	[more]

BLAST of CmoCh10G005250.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086372\|ref\|XP_008443900.1\|	8.7e-50	72.34	PREDICTED: uncharacterized protein LOC103487383 [Cucumis melo]	[more]
gi\|778665054\|ref\|XP_011648475.1\|	7.3e-49	71.43	PREDICTED: uncharacterized protein LOC105434480 [Cucumis sativus]	[more]
gi\|920688953\|gb\|KOM32936.1\|	3.7e-24	49.62	hypothetical protein LR48_Vigan01g249200 [Vigna angularis]	[more]
gi\|526118281\|ref\|NP_001267984.1\|	6.9e-23	52.17	stress induced protein [Vitis vinifera]	[more]
gi\|703135768\|ref\|XP_010105979.1\|	4.5e-22	44.78	hypothetical protein L484_007613 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh10G005250	CmoCh10G005250	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh10G005250.1	CmoCh10G005250.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G005250.1.CDS.3	CmoCh10G005250.1.CDS.3	CDS
CmoCh10G005250.1.CDS.2	CmoCh10G005250.1.CDS.2	CDS
CmoCh10G005250.1.CDS.1	CmoCh10G005250.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh10G005250.1.exon.3	CmoCh10G005250.1.exon.3	exon
CmoCh10G005250.1.exon.2	CmoCh10G005250.1.exon.2	exon
CmoCh10G005250.1.exon.1	CmoCh10G005250.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33168	FAMILY NOT NAMED	coord: 9..150 score: 1.5
None	No IPR available	PANTHER	PTHR33168:SF9	SUBFAMILY NOT NAMED	coord: 9..150 score: 1.5