CmoCh09G013360.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGAAAGATATTTGTTTTGCACTGCAAATCTTCTCTTGGCTAGAGAGAGAGAGAGAATGGGATCGGCCACCGCCGGAGCTCAGTGGATTTCCGCCCCACCGACCGGGAGAAGTGGCCGACGCATGGGGATCCCATTTCAACCTTCCTTCCGATTTGCTTTTCCGATTAGCAATAGTATTGGGCAGTTGAAGGGCAAGAGAGAGATAAAGGGAGGCAAGGTGTGTTACAGCGCAGAGGGAGTGAAGGATGAGATAGAGGAGGAGGAGGCTTGTGAGCTTGTGAATGGAATGGAGCTTTCCATTGGAGAAGAAGCTCACCATTCAATCACTGCATATCTCTTCAAGGCAGTCAAGAACAATAATGGAACAGCTATTCTGCTCTTGACGGATCTCTTTGCCTTTCAAGACTCTTCTGTTCGAGACTTCGCCTATCGTCTCGCTTGCAATGGCTTCAAGTATGCTATCTAACCTTATGCTCCCTTCAAGCTTTTTCATTATAATTCATATCTTTGTTAAGAACCACAACTCTCCACAATTATATGATATTGTCCACTTTGAGCTTAAGCTCTCATAGTTTTGCTCTGTGCTTTCCTAAAAAGACTCACGTCAACAAAGATATATTCCTTACCTATAAACACATGATCGTGGGACTCTCTCTCTCTCTCGATCAGGCTTTTAATGTTTTCTCAACTTGAACTACAGTGTCTTGCTTCCAGATGTATTTCATGGAGATTCATGTGAGGAACAAAAGACTGTGGAAGACATAGCAGCAGCAACAAAATGGTTGGTTGACGAGTTTTCAGCAGCAGGGATCTCGAGGAAGCTTGGGATCGTGGGATTTGGGTACGGGGGAGGCCGGGTAATCGACGTTCTAGCTCAAGACAAGGGTTCCTATTTTTCCATTGGCGCCTCCTTATATGGCACTGAGGTTAATCCTTCTCTGGCTACCAAAGTCGAGGTTCCAGTATTGCTCATCTCAGGGGATAATGATCCACTTTGTCCAGTGAGTGTCATGAAGGATTTGGAGAAGGGGATGGGAGAAGGTTCTAAGTTGGTGATATTTGGGGGAAGAGGCCATGGCTTTGTTCACAAACCTGGATCTCCAGAAGAAGATGAAGATGCTGAGCAGGCTTTTCTTATGCTAAGAAATTGGCTGCATGATGGATTGGTTGCAACTAATATTGAGCCAACTGCATAGGTAATTAGGTAATAAATGAAGTAGCTAACTGGTGCTACTTGGGTTCCAACACGCCTAAATGGGGGATGGCTCACTTTTATGCATTTCAGCAATGGTGTAGCTAATCCTCTGTACCTATTTTTCAGGCTAAAAATGGCAGTTATCAAACAAGACGACTCCCTGCTACCTTAGCTCCCCAGCACTAAGGGGGTCTGGGTCTTTTCTACGAAATCATTGATGATAAACGTGAAAGAAAACATAGAAGCAATAAATTTCATCCTAACAAAGACATTATGGAAGGACATCAACCTAAAAAAGTAAAGTTTCCTTTGGAAAAGCACATAAATCCATTAGC CAAAATGAAAGATATTTGTTTTGCACTGCAAATCTTCTCTTGGCTAGAGAGAGAGAGAGAATGGGATCGGCCACCGCCGGAGCTCAGTGGATTTCCGCCCCACCGACCGGGAGAAGTGGCCGACGCATGGGGATCCCATTTCAACCTTCCTTCCGATTTGCTTTTCCGATTAGCAATAGTATTGGGCAGTTGAAGGGCAAGAGAGAGATAAAGGGAGGCAAGGTGTGTTACAGCGCAGAGGGAGTGAAGGATGAGATAGAGGAGGAGGAGGCTTGTGAGCTTGTGAATGGAATGGAGCTTTCCATTGGAGAAGAAGCTCACCATTCAATCACTGCATATCTCTTCAAGGCAGTCAAGAACAATAATGGAACAGCTATTCTGCTCTTGACGGATCTCTTTGCCTTTCAAGACTCTTCTGTTCGAGACTTCGCCTATCGTCTCGCTTGCAATGGCTTCAATGTCTTGCTTCCAGATGTATTTCATGGAGATTCATGTGAGGAACAAAAGACTGTGGAAGACATAGCAGCAGCAACAAAATGGTTGGTTGACGAGTTTTCAGCAGCAGGGATCTCGAGGAAGCTTGGGATCGTGGGATTTGGGTACGGGGGAGGCCGGGTAATCGACGTTCTAGCTCAAGACAAGGGTTCCTATTTTTCCATTGGCGCCTCCTTATATGGCACTGAGGTTAATCCTTCTCTGGCTACCAAAGTCGAGGTTCCAGTATTGCTCATCTCAGGGGATAATGATCCACTTTGTCCAGTGAGTGTCATGAAGGATTTGGAGAAGGGGATGGGAGAAGGTTCTAAGTTGGTGATATTTGGGGGAAGAGGCCATGGCTTTGTTCACAAACCTGGATCTCCAGAAGAAGATGAAGATGCTGAGCAGGCTTTTCTTATGCTAAGAAATTGGCTGCATGATGGATTGGTTGCAACTAATATTGAGCCAACTGCATAGGTAATTAGGTAATAAATGAAGTAGCTAACTGGTGCTACTTGGGTTCCAACACGCCTAAATGGGGGATGGCTCACTTTTATGCATTTCAGCAATGGTGTAGCTAATCCTCTGTACCTATTTTTCAGGCTAAAAATGGCAGTTATCAAACAAGACGACTCCCTGCTACCTTAGCTCCCCAGCACTAAGGGGGTCTGGGTCTTTTCTACGAAATCATTGATGATAAACGTGAAAGAAAACATAGAAGCAATAAATTTCATCCTAACAAAGACATTATGGAAGGACATCAACCTAAAAAAGTAAAGTTTCCTTTGGAAAAGCACATAAATCCATTAGC ATGGGATCGGCCACCGCCGGAGCTCAGTGGATTTCCGCCCCACCGACCGGGAGAAGTGGCCGACGCATGGGGATCCCATTTCAACCTTCCTTCCGATTTGCTTTTCCGATTAGCAATAGTATTGGGCAGTTGAAGGGCAAGAGAGAGATAAAGGGAGGCAAGGTGTGTTACAGCGCAGAGGGAGTGAAGGATGAGATAGAGGAGGAGGAGGCTTGTGAGCTTGTGAATGGAATGGAGCTTTCCATTGGAGAAGAAGCTCACCATTCAATCACTGCATATCTCTTCAAGGCAGTCAAGAACAATAATGGAACAGCTATTCTGCTCTTGACGGATCTCTTTGCCTTTCAAGACTCTTCTGTTCGAGACTTCGCCTATCGTCTCGCTTGCAATGGCTTCAATGTCTTGCTTCCAGATGTATTTCATGGAGATTCATGTGAGGAACAAAAGACTGTGGAAGACATAGCAGCAGCAACAAAATGGTTGGTTGACGAGTTTTCAGCAGCAGGGATCTCGAGGAAGCTTGGGATCGTGGGATTTGGGTACGGGGGAGGCCGGGTAATCGACGTTCTAGCTCAAGACAAGGGTTCCTATTTTTCCATTGGCGCCTCCTTATATGGCACTGAGGTTAATCCTTCTCTGGCTACCAAAGTCGAGGTTCCAGTATTGCTCATCTCAGGGGATAATGATCCACTTTGTCCAGTGAGTGTCATGAAGGATTTGGAGAAGGGGATGGGAGAAGGTTCTAAGTTGGTGATATTTGGGGGAAGAGGCCATGGCTTTGTTCACAAACCTGGATCTCCAGAAGAAGATGAAGATGCTGAGCAGGCTTTTCTTATGCTAAGAAATTGGCTGCATGATGGATTGGTTGCAACTAATATTGAGCCAACTGCATAG
BLAST of CmoCh09G013360.1 vs. TrEMBL
Match: A0A0A0KT04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652280 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 5.4e-115 Identity = 216/304 (71.05%), Postives = 247/304 (81.25%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. TrEMBL
Match: V4T3Z9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001943mg PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 2.6e-85 Identity = 160/255 (62.75%), Postives = 195/255 (76.47%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. TrEMBL
Match: A0A061FKZ6_THECC (Alpha/beta-Hydrolases superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_036508 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85 Identity = 157/252 (62.30%), Postives = 201/252 (79.76%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. TrEMBL
Match: A0A061FJU8_THECC (Alpha/beta-Hydrolases superfamily protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_036508 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85 Identity = 157/252 (62.30%), Postives = 201/252 (79.76%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. TrEMBL
Match: A0A061FJ42_THECC (Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_036508 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85 Identity = 157/252 (62.30%), Postives = 201/252 (79.76%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. TAIR10
Match: AT1G35420.2 (AT1G35420.2 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 276.2 bits (705), Expect = 2.4e-74 Identity = 130/242 (53.72%), Postives = 175/242 (72.31%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. TAIR10
Match: AT3G23570.1 (AT3G23570.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 52.8 bits (125), Expect = 4.3e-07 Identity = 49/202 (24.26%), Postives = 88/202 (43.56%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. TAIR10
Match: AT3G23600.1 (AT3G23600.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 52.0 bits (123), Expect = 7.4e-07 Identity = 44/196 (22.45%), Postives = 85/196 (43.37%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. NCBI nr
Match: gi|449447627|ref|XP_004141569.1| (PREDICTED: uncharacterized protein LOC101210518 [Cucumis sativus]) HSP 1 Score: 422.2 bits (1084), Expect = 7.7e-115 Identity = 216/304 (71.05%), Postives = 247/304 (81.25%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. NCBI nr
Match: gi|659119499|ref|XP_008459689.1| (PREDICTED: uncharacterized protein LOC103498731 [Cucumis melo]) HSP 1 Score: 421.0 bits (1081), Expect = 1.7e-114 Identity = 220/305 (72.13%), Postives = 249/305 (81.64%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. NCBI nr
Match: gi|568838486|ref|XP_006473242.1| (PREDICTED: carboxymethylenebutenolidase homolog [Citrus sinensis]) HSP 1 Score: 326.6 bits (836), Expect = 4.4e-86 Identity = 161/255 (63.14%), Postives = 195/255 (76.47%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. NCBI nr
Match: gi|567884217|ref|XP_006434667.1| (hypothetical protein CICLE_v10001943mg [Citrus clementina]) HSP 1 Score: 323.6 bits (828), Expect = 3.7e-85 Identity = 160/255 (62.75%), Postives = 195/255 (76.47%), Query Frame = 1
BLAST of CmoCh09G013360.1 vs. NCBI nr
Match: gi|590603935|ref|XP_007020131.1| (Alpha/beta-Hydrolases superfamily protein isoform 2, partial [Theobroma cacao]) HSP 1 Score: 323.2 bits (827), Expect = 4.9e-85 Identity = 157/252 (62.30%), Postives = 201/252 (79.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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