CmoCh09G013320.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCCTCAAGGATTTTGTGCAACCTTGTCTTGTGGCTGGAGTAGTTGAAAATGGTGACTCTCCAAAAGTAGCTATTGCACCCGAGCCTATTATGTATGATGTTGGTGCACACCTGAAGAAGAATTTCCTTCCCTTGCACCTGAGCCTATTACTTTAGATACTGCTGTTTCCACTGACATAGTTAACGCACTTTGAAGATCATCTAGATCACAGTCTCCACCCAATTACCTGAGGGACTCTCACCGCAATCTGTTGGCTCAATCCCTTATGAATTCATCCTCTGAACCATTTTACTTGAGCAAATTCATTTCCTTTGCTGTATATTCTCCTTTCATAAGCATTGGTGTTGAATTTTCCTCTGAATATTAGCCATAAAATTGAATTTCACATTTGGTTTAAGCTGGCAGAGCACTTATTCATGTAGACAATGCTTAAAAGTAAATGTGATGTCTGTTTCTTTTATTTTTTGCGTGGAATTCAGGGACTTGGATTGTTGACTGTGTCTGCAACATTACCTTATTCCAGCACTTCTGCCTGCCAACAGACAGAAAACCGTGTCCCATGTTCCCCCAGTCTCGTCCACGTAGTTTTATTTTTCTTCTCCTTATATATTGTGGCATTTGCTCAAGGGGGACATAAGCCTTGCGTCCAAGCTTTCGGAGCCGATCAATTTGATGGACAACATCCAGAAGAGAGAAAAGCTAAAAGCTCTTTCTTTAATTGGTGGTACTTTGGTATCTCTGTGGCCACTTTTGCAACAGTTACTATAGTGAGCTATGTGCAAGATAACCTTAGCTGGAGTCTTGGGTTTGGCATTCCTTGTATTGCTATGGTTTTTGCACTAGTAGTCTTCTTGCTTGGAACTAGACGTACAGGTACAGTAGCGAAGGAGATGTGGAAAACCCATTTGTGAGGATTGGACGGGTGTTTATCATGGCAGTACGAAATTGGCGAGTAATCTCTTCAGAAATAGCTCATGAAGAGGAAATCCTTCGCCTTTTACCGCGCCATAGCTCTCAACAGTTCAGGTAAATCAGAGGACTAAAAGAAGGGTAAAATGTAATAATCTTTTTTCTGTTCAGAAATATAGTTGGATATGGATATCTGATATTTATAGTAAAAAGTGGGTAGAGGAATATAGGGAAGATATTTATAGCAAGTGGTTATATGTTAAGCAGGTAAAAAGTTGTTTATAGTAAACACTATTTATAGTAAAAAGTTAGGTAGATATTTATAGCATGGGGTTATATGGTTTATAGTAAACTATTTATAGTAAAAAGTTAGGTAGATATTTATAGCAAGGATTATATAAAAGTTGGGAAACAGGGGAATAGGTAGATATTTATTGTGTTATATGTTAAAGCTATATACAGTACACTAAAACTACATCTATATATATACTTAGTCAGTGATTTGAACCATATTTTCTCTGTATTCTTGTACTGTATTCTTTGTATTGAAAAACCATATCCTTTAGTCATATATATACTCGTCGTTATTTTTTTTTCTACTGATCTTTGTGTTCATCTAGGTATTTTCTTATATATATATATACTCGCATATTTTCTCTCTACTGGTCTTTGTGTTCATCTAGATTGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAAATTGAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCAAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCGAGTGTGTGCATTGTTGTTCTTTTTGTTGATCTGGATCGAGTGTGTGCATTATTGTTCTTTTTGTTGATTTGGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTCATATAGATCGAATGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCAAGTGAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTGATCTAGATCGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATTGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTTGTGTTCATCTAGATTGAGTGTGTGCATTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTCTTTTGTTGTTCTTTGTGTTCATCTAGATCGAGTGTGTGTGTTGTTGTTCTTTGTGTTCATCTACATCGAGTGTGTGCATTATTGTGCAATCCTAACACCATTTTATATTGTATGCATTATCGTAACTGTTTTCTTTCCTGGATTCTATAATTTGGTCGGTTCCTAGACAAAGCTTTGATTGTACCTAATAGTTTGAAGGAAGACGGTCATGCTTGTTGTGAATGTTTGCTGAATCCACCACACCTAAATGGTGTGAAAGTTATCTTATTTATAATCAAATAAATTACAAGGATATGAAAATAGTAATAAATGGAAATAACAATAAATGGAAAGATACCTATAGTAATAAGGCAAATATCTATATTTGCCTTATAATAAAATATCAAATATAATATATATGGTAAACTATAATTTATTACTAAATATCCTTAACACTTGTACTATCAGTGAAGTTGAGGAAGCAAAAGCATTAGTAGGGCTTGCCCCCATATGGGTTACATGCTTAGCATATGGTATTGTATTCTCTCAGTCATCAACTTTCTTTACAAAACAAGGAGTCACAATGGACAGATCAATAGTTCCTGGATTTGAAGTACCTGCTGCTTCACTTCAATCCTTTATCAGTCTGTCCATTGGCATTTCCATCCTAATATACGATTGCGAGACGTTTCACCGGGAAACCTTCTGGAAT ATTTCCTCAAGGATTTTGTGCAACCTTGTCTTGTGGCTGGAGTAGTTGAAAATGGTGACTCTCCAAAAGTAGCTATTGCACCCGAGCCTATTATGTATGATGGACTTGGATTGTTGACTGTGTCTGCAACATTACCTTATTCCAGCACTTCTGCCTGCCAACAGACAGAAAACCGTGTCCCATGTTCCCCCAGTCTCGTCCACGTAGTTTTATTTTTCTTCTCCTTATATATTGTGGCATTTGCTCAAGGGGGACATAAGCCTTGCGTCCAAGCTTTCGGAGCCGATCAATTTGATGGACAACATCCAGAAGAGAGAAAAGCTAAAAGCTCTTTCTTTAATTGGTGGTACTTTGGTATCTCTGTGGCCACTTTTGCAACAGTTACTATAGTGAGCTATGTGCAAGATAACCTTAGCTGGAGTCTTGGGTTTGGCATTCCTTGTATTGCTATGACGTACAGGTACAGTAGCGAAGGAGATGTGGAAAACCCATTTGTGAGGATTGGACGGGTGTTTATCATGGCAGTACGAAATTGGCGAGTAATCTCTTCAGAAATAGCTCATGAAGAGGAAATCCTTCGCCTTTTACCGCGCCATAGCTCTCAACAGTTCAGTTGGATATGGATATCTGATATTTATAGTAAAAAGTGGGTAGAGGAATATAGGGAAGATATTTATAGCAAGTGGTTATATGTTAAGCAGTCATCAACTTTCTTTACAAAACAAGGAGTCACAATGGACAGATCAATAGTTCCTGGATTTGAAGTACCTGCTGCTTCACTTCAATCCTTTATCAGTCTGTCCATTGGCATTTCCATCCTAATATACGATTGCGAGACGTTTCACCGGGAAACCTTCTGGAAT ATGTATGATGGACTTGGATTGTTGACTGTGTCTGCAACATTACCTTATTCCAGCACTTCTGCCTGCCAACAGACAGAAAACCGTGTCCCATGTTCCCCCAGTCTCGTCCACGTAGTTTTATTTTTCTTCTCCTTATATATTGTGGCATTTGCTCAAGGGGGACATAAGCCTTGCGTCCAAGCTTTCGGAGCCGATCAATTTGATGGACAACATCCAGAAGAGAGAAAAGCTAAAAGCTCTTTCTTTAATTGGTGGTACTTTGGTATCTCTGTGGCCACTTTTGCAACAGTTACTATAGTGAGCTATGTGCAAGATAACCTTAGCTGGAGTCTTGGGTTTGGCATTCCTTGTATTGCTATGACGTACAGGTACAGTAGCGAAGGAGATGTGGAAAACCCATTTGTGAGGATTGGACGGGTGTTTATCATGGCAGTACGAAATTGGCGAGTAATCTCTTCAGAAATAGCTCATGAAGAGGAAATCCTTCGCCTTTTACCGCGCCATAGCTCTCAACAGTTCAGTTGGATATGGATATCTGATATTTATAGTAAAAAGTGGGTAGAGGAATATAGGGAAGATATTTATAGCAAGTGGTTATATGTTAAGCAGTCATCAACTTTCTTTACAAAACAAGGAGTCACAATGGACAGATCAATAGTTCCTGGATTTGAAGTACCTGCTGCTTCACTTCAATCCTTTATCAGTCTGTCCATTGGCATTTCCATCCTAATATACGATTGCGAGACGTTTCACCGGGAAACCTTCTGGAAT
BLAST of CmoCh09G013320.1 vs. Swiss-Prot
Match: PTR9_ARATH (Protein NRT1/ PTR FAMILY 5.10 OS=Arabidopsis thaliana GN=NPF5.10 PE=2 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.2e-62 Identity = 135/269 (50.19%), Postives = 173/269 (64.31%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. Swiss-Prot
Match: PTR25_ARATH (Protein NRT1/ PTR FAMILY 5.12 OS=Arabidopsis thaliana GN=NPF5.12 PE=2 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.4e-51 Identity = 124/271 (45.76%), Postives = 161/271 (59.41%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. Swiss-Prot
Match: PTR24_ARATH (Protein NRT1/ PTR FAMILY 5.11 OS=Arabidopsis thaliana GN=NPF5.11 PE=2 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.3e-46 Identity = 115/268 (42.91%), Postives = 155/268 (57.84%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. Swiss-Prot
Match: PTR22_ARATH (Protein NRT1/ PTR FAMILY 5.14 OS=Arabidopsis thaliana GN=NPF5.14 PE=2 SV=2) HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46 Identity = 113/273 (41.39%), Postives = 149/273 (54.58%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. Swiss-Prot
Match: PTR23_ARATH (Protein NRT1/ PTR FAMILY 5.13 OS=Arabidopsis thaliana GN=NPF5.13 PE=2 SV=2) HSP 1 Score: 187.2 bits (474), Expect = 2.3e-46 Identity = 114/277 (41.16%), Postives = 153/277 (55.23%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TrEMBL
Match: A0A0A0KPF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G167000 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 6.4e-72 Identity = 133/181 (73.48%), Postives = 151/181 (83.43%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TrEMBL
Match: A0A061FKY1_THECC (Major facilitator superfamily protein OS=Theobroma cacao GN=TCM_036497 PE=3 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71 Identity = 155/275 (56.36%), Postives = 183/275 (66.55%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TrEMBL
Match: A0A0B0P940_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03296 PE=3 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 3.5e-70 Identity = 153/275 (55.64%), Postives = 182/275 (66.18%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TrEMBL
Match: V4SJK9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000719mg PE=3 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 4.6e-70 Identity = 146/275 (53.09%), Postives = 181/275 (65.82%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TrEMBL
Match: A0A059BVA5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02994 PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.0e-69 Identity = 148/277 (53.43%), Postives = 175/277 (63.18%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TAIR10
Match: AT1G22540.1 (AT1G22540.1 Major facilitator superfamily protein) HSP 1 Score: 240.4 bits (612), Expect = 1.3e-63 Identity = 135/269 (50.19%), Postives = 173/269 (64.31%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TAIR10
Match: AT1G72140.1 (AT1G72140.1 Major facilitator superfamily protein) HSP 1 Score: 204.5 bits (519), Expect = 7.7e-53 Identity = 124/271 (45.76%), Postives = 161/271 (59.41%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TAIR10
Match: AT1G72130.1 (AT1G72130.1 Major facilitator superfamily protein) HSP 1 Score: 188.0 bits (476), Expect = 7.5e-48 Identity = 115/268 (42.91%), Postives = 155/268 (57.84%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TAIR10
Match: AT1G72120.1 (AT1G72120.1 Major facilitator superfamily protein) HSP 1 Score: 187.6 bits (475), Expect = 9.7e-48 Identity = 113/273 (41.39%), Postives = 149/273 (54.58%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. TAIR10
Match: AT1G72125.1 (AT1G72125.1 Major facilitator superfamily protein) HSP 1 Score: 187.2 bits (474), Expect = 1.3e-47 Identity = 114/277 (41.16%), Postives = 153/277 (55.23%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. NCBI nr
Match: gi|778708284|ref|XP_011656158.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Cucumis sativus]) HSP 1 Score: 333.2 bits (853), Expect = 4.1e-88 Identity = 176/275 (64.00%), Postives = 202/275 (73.45%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. NCBI nr
Match: gi|659073329|ref|XP_008437003.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Cucumis melo]) HSP 1 Score: 328.6 bits (841), Expect = 1.0e-86 Identity = 176/275 (64.00%), Postives = 200/275 (72.73%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. NCBI nr
Match: gi|659074637|ref|XP_008437711.1| (PREDICTED: uncharacterized protein LOC103483057 [Cucumis melo]) HSP 1 Score: 322.8 bits (826), Expect = 5.5e-85 Identity = 176/275 (64.00%), Postives = 199/275 (72.36%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. NCBI nr
Match: gi|659073325|ref|XP_008437001.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Cucumis melo]) HSP 1 Score: 318.9 bits (816), Expect = 7.9e-84 Identity = 174/275 (63.27%), Postives = 194/275 (70.55%), Query Frame = 1
BLAST of CmoCh09G013320.1 vs. NCBI nr
Match: gi|778700257|ref|XP_011654841.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.10-like isoform X2 [Cucumis sativus]) HSP 1 Score: 310.8 bits (795), Expect = 2.2e-81 Identity = 166/275 (60.36%), Postives = 196/275 (71.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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