CmoCh09G006950.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACATCAAAGTATATAACTGCCAGAAGCATCGTTGGACTAAAAATTTTTGGAATGTGGACGTTCTGTAATTTTTCACTTTCCAACTTTGCCCTGGCGGTTACTTGTACTTAGAGATGATAGAAGGGAGAAAACAATAAATTAGGAATTTTAAATTTTATGTTTAGTAATAAACTACACATAATTGAACAATAAAATAACTGTAATTATTTAACCAATTTTGATTAAATTTTTAATTAAATTTAATATTTTTTAAAAATAGAGAAACTAAAACTAAACCAAATAAATTTTAATAGAGTATTTATTGAATGTTAACGCGTGGACACTATAAATCTCAATGGAGTGTTAAAACTAATAGCTATATACACTATAAATAGTGTTAAAACTAATAGCTATAGACACTATAAATATTAATAGTTGTTAGTCGTGTGTTAGCGGTAGACGCTATATATTTGAATGGAATGCTAACTATTTTTAATTTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATTATAGGGATTGGTATGGGTGTTTCTGAAACTCCAAGTACAATAAAACCTCTTGTGGCGGCCATCACTTTTCATCAGTTATTTGAAGGTATGGGCCTAGGAGGATGCATCGCCCAGGCAAAGCTCAGAACCAGGGCAGCGGTGATAATGGCAGTTTTCTTCTGCCTGACAACGCCAATTGGGATAGCAACAGGCATTGGAGTAACCAACAGCTACGACGAAGATAGCCCAAAAGCACTCATAGTTGAGGGGATTCTGAACGCAGCCTCCGCTGGTATCTTAATGTATATGGCTCTTGTGGATTTTCTGGCTGCTGATTTTATGAGCCTTAGAATGCAGCGCAATGCAAAGCTTCAATTCTTTGCCGATGTTGCTCTTATTCTTGGAGCTGCTTTGATGTCTTTACTTGCCATATGGGCTTGA ATGTCGACATCAAAGTATATAACTGCCAGAAGCATCGTTGGACTAAAAATTTTTGGAATGTGGACGTTCTGGATTGGTATGGGTGTTTCTGAAACTCCAAGTACAATAAAACCTCTTGTGGCGGCCATCACTTTTCATCAGTTATTTGAAGGTATGGGCCTAGGAGGATGCATCGCCCAGGCAAAGCTCAGAACCAGGGCAGCGGTGATAATGGCAGTTTTCTTCTGCCTGACAACGCCAATTGGGATAGCAACAGGCATTGGAGTAACCAACAGCTACGACGAAGATAGCCCAAAAGCACTCATAGTTGAGGGGATTCTGAACGCAGCCTCCGCTGGTATCTTAATGTATATGGCTCTTGTGGATTTTCTGGCTGCTGATTTTATGAGCCTTAGAATGCAGCGCAATGCAAAGCTTCAATTCTTTGCCGATGTTGCTCTTATTCTTGGAGCTGCTTTGATGTCTTTACTTGCCATATGGGCTTGA ATGTCGACATCAAAGTATATAACTGCCAGAAGCATCGTTGGACTAAAAATTTTTGGAATGTGGACGTTCTGGATTGGTATGGGTGTTTCTGAAACTCCAAGTACAATAAAACCTCTTGTGGCGGCCATCACTTTTCATCAGTTATTTGAAGGTATGGGCCTAGGAGGATGCATCGCCCAGGCAAAGCTCAGAACCAGGGCAGCGGTGATAATGGCAGTTTTCTTCTGCCTGACAACGCCAATTGGGATAGCAACAGGCATTGGAGTAACCAACAGCTACGACGAAGATAGCCCAAAAGCACTCATAGTTGAGGGGATTCTGAACGCAGCCTCCGCTGGTATCTTAATGTATATGGCTCTTGTGGATTTTCTGGCTGCTGATTTTATGAGCCTTAGAATGCAGCGCAATGCAAAGCTTCAATTCTTTGCCGATGTTGCTCTTATTCTTGGAGCTGCTTTGATGTCTTTACTTGCCATATGGGCTTGA
BLAST of CmoCh09G006950.1 vs. Swiss-Prot
Match: ZIP9_ORYSJ (Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3) HSP 1 Score: 174.9 bits (442), Expect = 7.3e-43 Identity = 86/137 (62.77%), Postives = 113/137 (82.48%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. Swiss-Prot
Match: ZIP8_ORYSJ (Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-42 Identity = 84/137 (61.31%), Postives = 109/137 (79.56%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. Swiss-Prot
Match: ZIP5_ORYSJ (Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 3.6e-42 Identity = 84/137 (61.31%), Postives = 109/137 (79.56%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.0e-40 Identity = 81/137 (59.12%), Postives = 107/137 (78.10%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.6e-40 Identity = 84/137 (61.31%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TrEMBL
Match: A0A0A0L1S4_CUCSA (ZIP transporter OS=Cucumis sativus GN=Csa_4G618490 PE=3 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 9.2e-53 Identity = 110/137 (80.29%), Postives = 123/137 (89.78%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TrEMBL
Match: M1B061_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013109 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.0e-47 Identity = 101/137 (73.72%), Postives = 117/137 (85.40%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TrEMBL
Match: M1B059_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013108 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 2.6e-47 Identity = 100/137 (72.99%), Postives = 116/137 (84.67%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TrEMBL
Match: C4TNX4_TOBAC (Metal transporter OS=Nicotiana tabacum GN=NtZIP1 PE=2 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 3.4e-47 Identity = 98/137 (71.53%), Postives = 117/137 (85.40%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TrEMBL
Match: K4CEI0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 4.9e-46 Identity = 98/137 (71.53%), Postives = 116/137 (84.67%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TAIR10
Match: AT1G05300.1 (AT1G05300.1 zinc transporter 5 precursor) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41 Identity = 81/137 (59.12%), Postives = 107/137 (78.10%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TAIR10
Match: AT2G32270.1 (AT2G32270.1 zinc transporter 3 precursor) HSP 1 Score: 166.4 bits (420), Expect = 1.5e-41 Identity = 84/137 (61.31%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TAIR10
Match: AT1G10970.1 (AT1G10970.1 zinc transporter 4 precursor) HSP 1 Score: 161.0 bits (406), Expect = 6.1e-40 Identity = 81/137 (59.12%), Postives = 105/137 (76.64%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TAIR10
Match: AT1G60960.1 (AT1G60960.1 iron regulated transporter 3) HSP 1 Score: 157.5 bits (397), Expect = 6.8e-39 Identity = 80/137 (58.39%), Postives = 105/137 (76.64%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. TAIR10
Match: AT5G62160.1 (AT5G62160.1 zinc transporter 12 precursor) HSP 1 Score: 156.4 bits (394), Expect = 1.5e-38 Identity = 81/137 (59.12%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. NCBI nr
Match: gi|659129356|ref|XP_008464645.1| (PREDICTED: zinc transporter 5-like [Cucumis melo]) HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52 Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. NCBI nr
Match: gi|778695487|ref|XP_011654004.1| (PREDICTED: zinc transporter 8 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52 Identity = 110/137 (80.29%), Postives = 123/137 (89.78%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. NCBI nr
Match: gi|697112914|ref|XP_009610335.1| (PREDICTED: zinc transporter 5 [Nicotiana tomentosiformis]) HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47 Identity = 100/137 (72.99%), Postives = 116/137 (84.67%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. NCBI nr
Match: gi|565374343|ref|XP_006353723.1| (PREDICTED: zinc transporter 5-like [Solanum tuberosum]) HSP 1 Score: 196.8 bits (499), Expect = 2.9e-47 Identity = 101/137 (73.72%), Postives = 117/137 (85.40%), Query Frame = 1
BLAST of CmoCh09G006950.1 vs. NCBI nr
Match: gi|565374341|ref|XP_006353722.1| (PREDICTED: zinc transporter 5-like [Solanum tuberosum]) HSP 1 Score: 196.4 bits (498), Expect = 3.7e-47 Identity = 100/137 (72.99%), Postives = 116/137 (84.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
|