CmoCh08G002330.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G002330.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionVacuolar iron transporter (VIT) family protein
LocationCmo_Chr08 : 1406682 .. 1412045 (-)
Sequence length1919
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCGGAGTTCGTCGCCTCCGATGAACAGAGATAAGCATCTGCCGGAGGTGGAAACAGAGACGACGGGGGAGGATGACGAGGAACCAAGTGTTTTGCTACGGAGGAAGAAATTTCGTCGACGCGCTCAGTCTAGCTTCTCATCCACTGACAGCGACGAAACGTTCTCCGAGTATTCCGAGGGACGTAAATTCGTCGTTCGAGATGAACAACAACAAGAACAATGTAAGTTTCGGCAAATTATTCATCGCTGTTTGGATTTCTTTGTTCTTCTCCCGTTCTTGAAATGTACTTTAGTCGCCATTTGAAACTGGAATTTGAGGCTTAGAGGCGTGGAATCGATCGCCATTGTTGCGCTACTGTTATCACGACAGGAGGCCAAAATGAAGCTTCATTAGGCGAAAACACAGTTAAATTTATTCCTTCAAATACTTTCTAAATTCGTGGATCTACTCGATTTCCTTTCTTTTAATTAACCAATTCTCATTCCGTAAATCTTGGCGAAGAAGACGAAGACTACGTGTTCGACGAAGGGAAAGTGATCGCCACAGTTCGTTTTGTTTTGTTCTGATTTGTTAGGTTGCTTAATTAATAATTAATTCTCTTAATTACAGTATTAACTTTACGAAAACTTTTCTGCAGAACAAAATAAGTAACACGTCGTCATCGTTAATAATAATCAATCATTAATGTTCTTTAATTTTCTTGTATGTTTTAGCAACATATTCAGAACTCAGAGATACCGACAATTTAGAACTGGGTCCCGTCCTATGTCAAAATCCTCCTGCAATTTGTTCTTTCTGCTAGTAACTTGCAGCAAGCGTAATTGGGTTCTTTAGACTAACCAGAGCTCTTGAACGTTTAGGATTTGAATTTTTACTGTATGGATTCTTTCCCTAGGATAGGAGTTGGATTCTGTAACCAATCAAGAACAGAACCCTCAGTCAATTTTATCCACCCAAACAAATTGCAGGAGCCTTTTAATTCTGTCAATTATGCAACTGTTGAATGATGGGAAATTTGTTTTTCTTGCCATTGATCTATGGGAAGAACTTGAATGAAAAGCTCTGCTGAAGTTATGTGATTCTTATTATATTTTTGGTACCAAATTTGGGTATTCATTTGGAAATTCGATGTTTCCTTCCTGTTTTATGATTTCTTATTGTAACTTCAGGTACTGGATGCTCTATTGGATCTTCTCGGTTGAAAGTCGATGGTGATCGTCATGCTTTTTTTGAAGTAAGCCCCACTGATGAGATTGAAGCTATCAGCACAAGGAAAACAGGCTCGCTAAATGGCACTGGGATCAAGTTCCAGCATGATCAGATCCCTTCAGCTGTTTCTAATCAACCATCCAAGGGGGAAATTGAGGAGCAGGCTTCATATAAAAGAGTGGAGTTGAGGTCAGAAAATGGAACTCAAGTGGCGGATTTATATCTTGGAAGGATATATGAGAAACCCAGCTCGCATAATTTCTACTGTCCTAACTGTCACGCTTGTGTCACGAAGGTGATTATACGTGAAAGGGAATGGGTAAATAATACTGTTTCTAAACCAATTCCTTCTCCGGTTGATAGATTCAGATGCACCTCTTGCCTCAGTTTCCTCGCCCCTATAGGTGCGTTTCTCATTCTTATCTGATATATGTTGTATGGTTCAAACTGTACTGCAGCAGTTGACTCCTTTAAAATATGTGAGATCCCACGTCCCTCGGAGAGGGGAACAAAACATTATTTATAAGAGTGTAGAAACATCTTTCTAACAAACGCGTTTTAAAAACCTTAAGAGAAAACTCGGAAGAAAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGAGTTTGGGTCATTACAAATGATATTAGAGCTAGACCTCAGGACGTGTGCTAGCGAAGATGTTGAGCCCCAAAGGGGTTGGACACTGAGCGATGTGCCAGTAAGGACGCTGAACCCCGAAAGAGAGTGCACATCAGGGGATGTGCCAACGAGGATGTTGAGCCTCGAAGGGGGGTAAATTGTGAGATCTCACATCGGTTGGAGAGGGGAACAAAACATTCTTTATAAGGGTGTGGAAACATCTTCCTAACAGACATGTTTTTGTCTGTTTTAAAAAATTTTGAAGGAAAGTTCGAAAGAGAAAGCTCAAAGAGGACAATATTTGCTAGCGGTGGGTTTGGGCCGTTTCAAAATAATTCTCGATAGGTGTGAAAACTGTTGCCATCAATGGTTTTGCCACTTACTGATATTGAAAGAAAAGCGTCTCCCTTAAGGATGCCGGTGGCACATGCTGATTGAGGCTTAAAATAAAAAACACACTTTAGCTTTTGTGTTAAGATTAATCATCACTGTGAAGGTTATGCGGGAGTTGACTTGGAATCATGTAATTGTTTCATCTCTGTTTGCAATGTTTTCATAAATAGAGGGAAGGGACCTTTTGAAAATTGTCTTGGCCTTTGGAAACAGTCAAGGATAAAGGGTAGTTTATCATATATGTTTGTGTATGTTGTCAAATGGATCTTACCAGGATTACTGAGTTAAGCTATTTTTTCAATGGGCAGGTGCATGGCTCTTTCCTAAATTGGCTACTCCTGACCGTGAGGAAGAAGTTTTACCCGGACAAGGTATTTGATTTTGTACATGCTTTTGGTGTTTTATGTCTTTTTTTTTTAAACTTTTGAAGATTATCGTAATCGACATGAACTAAGATGCAAATTAGAAAGATTGATATTTCCAATGATACTTGAGCATGGAGAATAAATCTCATGATCCTCTTCATTCATCCATCTAATTTCTCTCCATTCTTAGTTTCCTTCTGGGAAATCAAAGCAGAAGAAGAAAGATCTTTCATCATTTATTTTCACAGCTACGCTTCTGATCCCTTTCCCAAAAAGGATAGAACATGCGTGGCTATTTGAAATTGATTCTTTGCATGTGAGGAAATTACTTTCTGCTGTCTATATAATGTTGAAGCATAGATTTATGAGGATATATGGTTGGAGGAATATCATACCCGTAGCAATAAGTTGGATGATGAAACTCCCACCTCAGCTAGTTTAGGGAATGATCATGGGTTTATAATCAAATAATATTCTCTCTATTGGTACGAGGGCCTTTTGGAAAAACCCAAAGTAAAGCCATGAGAGCTTATGCTCAAATTGGACAATATCATACCGTTGTAGAGAGTCAGGTTCATCTAACATGGTGTCAGAGCTATGCTCTAAACTTAGTCATGTCAATAGATTGGTAAATTCTCAACTGTCGAACAAAAAACTCCAAAAGAAAAAGAGTCGAGCCTTGATTAAGGGGAGGCATACTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTCCCACGTTGGCTAATTTAGGGAATGATCATGAGTTATAATCAAAGAAAACTCTCTCCATTGGTATGAGGCAATATCATACCATAGTGGAGAGTCGTGTTCATCTAACAAGATTATGACATCAAGTCAAAGCACGCACTCTCATGGTCTTTTCCTACTAAATATGCGCGCAGGAAATAACGCTGCAAGCATAGGGATCAGAGAAAGGGAGACATTTCAAGTGTTGCAGGAAACAAGAGATCATCAAAGAAGTCAAGTTGGTAGAGACACTTCCAGCGTTCCCGATCAGTCAGTTCATTGTGCAGTAACTGATAAAGTTGAAGGTGATCATGCTGTATCTAATTCAACGCCAACTCATTCTTCACGTAACACAACAATTGCCGATGAAGGAGTGAATATCAAACAAGGTAGAGGCAAAGTTGGAGTGAATATCAAACAAGGTAGAGGCAAAGTTAGAGTGAATATCAAACAAGGTAGAGGCAAAGTTTTAATAATTTATATTTGTTGAAATTAACAGAGATTTACTCGAGTTAATATTAATAGAGATTTATTAGTTGAAACAGGACGTGTGGTGGATAGAGGAGTAGAAGCTGAACCAAGTAGGTTTAACAGGTGGGAAATTGTGAAAAGTATAGTGTATGGTGGTTTATCTGAATCAATTACAAGCCTCGGCATTATGACATCTGCAGCGAGTGCCAATACTGCAATAGGTTATTATTTACTACTTTTTTCCATCCTGCTTATAGCATCTAAACTTCATTTGTATAAGAAACATGAACTTGAGTTGTACCATATATCTAGAACAGCATTTTTTAAACATTTTTGGATCTTCAAGAGATGCTAGAGTACGGACATCTCAAGTTACACCATAATATGGAACAGCATCTGTCTTTGAAACATGATATATCCTGGTTTTTTTTTACCTAAACTAAGTTGTGTCAAAATATTAATCTATTTTCACGTTCTTTTTGCAGGCAACATTATAGTTTTGGCATTGGCAAATCTGATTAGAGGGCTTTTTATCCTTGGACATAATGTAAGTAACTGACTTTCTGATAAACCGCAGAGATGAATGTTTATTTAATTTAGACCGATTACTAAAAGAAGTAGATGGTAGAGGAGATAGTGTGCGGGAGAATTGTTAAACTTTCTTACTAAATGGTTTCATCTCAAGACTCTTCGCGCATTTATATCGTGTCACGGTAGTATGTTGAGAAAGACTGTTTATGATTTGGCTTGTGTGATGGTAACACGAGGCACATTCGAGTTGTATTGATTACCTACTTTTTGGTCTCGTCGTATCTTTATTACTTTGTTCAAAATTCCATTACATTTTTGTTTGTTGAATCATAAGCTGTCTCTCATTAAACATACACAATTTTTCAGTTGAGAGGACTCAAGACCGAGCAGTTCAGAAGGACATCTCATGAACCAGTAGACCAATACGAAGTAGTACTGGGAAACCGAGAGAATTACGTTCTACATTGCACGCTTGCCATCATCTCATTCATACTCTTTGGCTTAGTCCCCACTCTGGTTTACGTTTTAACATTCACCAAGAGCAATAACAAGGATTTCAAGCTTGCAGCAGCGGTAGGAGCTTCTTTTTTATGCATCATATTGCTTGCTATTGGGAAGGCTTCCATTCAGAGACCAAAAAATTGGGATGCATACGCCAAAACAGTAGCGACTTACATCGTTATAGCAGCCTGGGCCGGAAGCTTCTCATACATGGCTGGGGATCTACTCGACAAGTTCATCAAGAAATACAATGATTGGTTTGAGCGAAGCCGCTCTGCATTCAGGCTCAATCTGCCTCTGCCTGAGATGAGTTTGGCGGAACCAGCATGGGGATCCTTGTGAGGTAGCTCCAAATATGAAGTTAGAACATTTTGTTATTTTCAACTACTTTCATTGTTGACAGAAACGCACTCAAAATCTCCAATTAATTCACTTTTTTTTGCAAGGAAGCCAAATGGATTGCATTGACTTCCTGTTTACAAAAAGGGAATAACAAATTCCAG

mRNA sequence

TACCGGAGTTCGTCGCCTCCGATGAACAGAGATAAGCATCTGCCGGAGGTGGAAACAGAGACGACGGGGGAGGATGACGAGGAACCAAGTGTTTTGCTACGGAGGAAGAAATTTCGTCGACGCGCTCAGTCTAGCTTCTCATCCACTGACAGCGACGAAACGTTCTCCGAGTATTCCGAGGGACGTAAATTCGTCGTTCGAGATGAACAACAACAAGAACAATAACAAAATAATAACTTGCAGCAAGCGATAGGAGTTGGATTCTGTACTGGATGCTCTATTGGATCTTCTCGGTTGAAAGTCGATGGTGATCGTCATGCTTTTTTTGAAGTAAGCCCCACTGATGAGATTGAAGCTATCAGCACAAGGAAAACAGGCTCGCTAAATGGCACTGGGATCAAGTTCCAGCATGATCAGATCCCTTCAGCTGTTTCTAATCAACCATCCAAGGGGGAAATTGAGGAGCAGGCTTCATATAAAAGAGTGGAGTTGAGGTCAGAAAATGGAACTCAAGTGGCGGATTTATATCTTGGAAGGATATATGAGAAACCCAGCTCGCATAATTTCTACTGTCCTAACTGTCACGCTTGTGTCACGAAGGTGATTATACGTGAAAGGGAATGGGTAAATAATACTGTTTCTAAACCAATTCCTTCTCCGGTTGATAGATTCAGATGCACCTCTTGCCTCAGTTTCCTCGCCCCTATAGGTGCATGGCTCTTTCCTAAATTGGCTACTCCTGACCGTGAGGAAGAAGTTTTACCCGGACAAGGAAATAACGCTGCAAGCATAGGGATCAGAGAAAGGGAGACATTTCAAGTGTTGCAGGAAACAAGAGATCATCAAAGAAGTCAAGTTGGTAGAGACACTTCCAGCGTTCCCGATCAGTCAGTTCATTGTGCAGTAACTGATAAAGTTGAAGGTGATCATGCTGTATCTAATTCAACGCCAACTCATTCTTCACGTAACACAACAATTGCCGATGAAGGAGTGAATATCAAACAAGGTAGAGGCAAAGTTGGAGTGAATATCAAACAAGGTAGAGGCAAAGTTAGAGTGAATATCAAACAAGGACGTGTGGTGGATAGAGGAGTAGAAGCTGAACCAAGTAGGTTTAACAGGTGGGAAATTGTGAAAAGTATAGTGTATGGTGGTTTATCTGAATCAATTACAAGCCTCGGCATTATGACATCTGCAGCGAGTGCCAATACTGCAATAGGCAACATTATAGTTTTGGCATTGGCAAATCTGATTAGAGGGCTTTTTATCCTTGGACATAATTTGAGAGGACTCAAGACCGAGCAGTTCAGAAGGACATCTCATGAACCAGTAGACCAATACGAAGTAGTACTGGGAAACCGAGAGAATTACGTTCTACATTGCACGCTTGCCATCATCTCATTCATACTCTTTGGCTTAGTCCCCACTCTGGTTTACGTTTTAACATTCACCAAGAGCAATAACAAGGATTTCAAGCTTGCAGCAGCGGTAGGAGCTTCTTTTTTATGCATCATATTGCTTGCTATTGGGAAGGCTTCCATTCAGAGACCAAAAAATTGGGATGCATACGCCAAAACAGTAGCGACTTACATCGTTATAGCAGCCTGGGCCGGAAGCTTCTCATACATGGCTGGGGATCTACTCGACAAGTTCATCAAGAAATACAATGATTGGTTTGAGCGAAGCCGCTCTGCATTCAGGCTCAATCTGCCTCTGCCTGAGATGAGTTTGGCGGAACCAGCATGGGGATCCTTGTGAGGTAGCTCCAAATATGAAGTTAGAACATTTTGTTATTTTCAACTACTTTCATTGTTGACAGAAACGCACTCAAAATCTCCAATTAATTCACTTTTTTTTGCAAGGAAGCCAAATGGATTGCATTGACTTCCTGTTTACAAAAAGGGAATAACAAATTCCAG

Coding sequence (CDS)

ATGACATCTGCAGCGAGTGCCAATACTGCAATAGGCAACATTATAGTTTTGGCATTGGCAAATCTGATTAGAGGGCTTTTTATCCTTGGACATAATTTGAGAGGACTCAAGACCGAGCAGTTCAGAAGGACATCTCATGAACCAGTAGACCAATACGAAGTAGTACTGGGAAACCGAGAGAATTACGTTCTACATTGCACGCTTGCCATCATCTCATTCATACTCTTTGGCTTAGTCCCCACTCTGGTTTACGTTTTAACATTCACCAAGAGCAATAACAAGGATTTCAAGCTTGCAGCAGCGGTAGGAGCTTCTTTTTTATGCATCATATTGCTTGCTATTGGGAAGGCTTCCATTCAGAGACCAAAAAATTGGGATGCATACGCCAAAACAGTAGCGACTTACATCGTTATAGCAGCCTGGGCCGGAAGCTTCTCATACATGGCTGGGGATCTACTCGACAAGTTCATCAAGAAATACAATGATTGGTTTGAGCGAAGCCGCTCTGCATTCAGGCTCAATCTGCCTCTGCCTGAGATGAGTTTGGCGGAACCAGCATGGGGATCCTTGTGA
Homology
[Close]
BLAST of CmoCh08G002330.1 vs. Swiss-Prot
Match: MEBL_ARATH (Membrane protein of ER body-like protein OS=Arabidopsis thaliana GN=MEBL PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.5e-28
Identity = 69/178 (38.76%), Postives = 115/178 (64.61%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTS---------HEPVDQ 60
           ++SAA +  ++ NI+VL LANL+ GL ++ HNL+ L+ E+  RT+          E   +
Sbjct: 564 ISSAAGSGASMLNILVLGLANLLGGLILIIHNLQELREEEPIRTTTEDNQTNGREEEEGR 623

Query: 61  YEVVLGNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIIL 120
           Y+ +LG REN+ LH T+AI+SFI+ G++P +VY  +F++ +NKD+K+A+  GAS  CI+L
Sbjct: 624 YKRLLGRRENFTLHATVAILSFIITGILPPVVYYFSFSEKHNKDYKVASVFGASLFCIVL 683

Query: 121 LAIGKASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRS 170
           LAI KA ++ P+   +Y K++  Y  IA      SY+ G+ L++ ++K+  W + S +
Sbjct: 684 LAIAKAHVRYPRG--SYLKSILYYGSIAVSVSGISYVVGNFLEQLLEKHG-WSDGSET 738

[Close]
BLAST of CmoCh08G002330.1 vs. Swiss-Prot
Match: MEB2_ARATH (Membrane protein of ER body 2 OS=Arabidopsis thaliana GN=MEB2 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-20
Identity = 57/163 (34.97%), Postives = 97/163 (59.51%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSHEPVDQYEVVLGNRE 60
           ++SA+++ ++  NI+ LA+ANL  GL +L  N + L     R +S +  D+YE +LG R 
Sbjct: 365 VSSASASGSSTMNILALAVANLAGGLIVLAQNFQDL-----RNSSDQEKDRYEELLGRRT 424

Query: 61  NYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGKASIQ 120
              +H  +A++S+I FGL+P LVY  +F ++  K++KL +    S +C+ILL   K  ++
Sbjct: 425 KSRIHILVAVMSYIFFGLIPPLVYAFSFYETGIKNYKLISVFLGSLVCVILLGSIKVYVR 484

Query: 121 RPKN----WDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKK 160
           +P N      AY K+ A Y  I   +   SY+ GD++ ++I+K
Sbjct: 485 KPTNSCGSTKAYLKSAAYYTSIVVASCGISYVVGDIMGEYIEK 522

[Close]
BLAST of CmoCh08G002330.1 vs. Swiss-Prot
Match: MEB1_ARATH (Membrane protein of ER body 1 OS=Arabidopsis thaliana GN=MEB1 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.5e-20
Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRR---TSHEPV------DQ 60
           +TSAA++  +  N++ L +ANL  GL +  H+L+ L  E+ R+   T   P       D+
Sbjct: 432 VTSAAASGASTLNVLALGVANLSSGLLLTVHSLQELINEKPRKQTNTDDSPEEGEGEEDR 491

Query: 61  YEVVLGNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNK--DFKLAAAVGASFLCI 120
           YE VLG RE   +H  +AI SF++FGL+P LVY  +F K   K  ++K+ A    S LCI
Sbjct: 492 YEEVLGRREYSRIHRVIAISSFVIFGLIPPLVYGFSFRKKMEKRQEYKVLAVYAVSLLCI 551

Query: 121 ILLAIGKASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKK---YNDWFER 169
           +LL+I KA + + ++   Y KT+  Y   A  A  FS   G L+ ++++K   Y+D  E 
Sbjct: 552 VLLSIAKAYVSKKRD---YVKTLFRYTTTATTASGFSQFVGYLVSQWLEKSGFYDDSPET 610

[Close]
BLAST of CmoCh08G002330.1 vs. TrEMBL
Match: A0A0A0K9Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G352490 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.3e-63
Identity = 133/194 (68.56%), Postives = 150/194 (77.32%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH----EPVDQYEVVL 60
           +TSAAS NT   NI+VL+LANLI GLFILGHNL GLK+EQFR ++     + VD+YEVVL
Sbjct: 610 VTSAASGNTGTRNIVVLSLANLISGLFILGHNLTGLKSEQFRTSNETDDDDRVDRYEVVL 669

Query: 61  GNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGK 120
           GNRENY+LH  LAI SF+ FGLVP LVY  +FTKSN+KD KLAA  GAS LCIILLA+GK
Sbjct: 670 GNRENYILHFVLAIFSFVFFGLVPPLVYGFSFTKSNDKDLKLAAVAGASLLCIILLALGK 729

Query: 121 ASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSA-FRLNL 180
           A IQRP  WD Y KTVA+YIVIAA AG FSY+AG L+DK IKKY  WFE    A F L L
Sbjct: 730 AYIQRPNRWDVYIKTVASYIVIAAGAGGFSYLAGSLIDKCIKKYG-WFEEENPASFNLGL 789

Query: 181 PLPEMSLAEPAWGS 190
           PLPEMSL + AWGS
Sbjct: 790 PLPEMSLVKAAWGS 802

[Close]
BLAST of CmoCh08G002330.1 vs. TrEMBL
Match: M5VZT0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008617mg PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.3e-41
Identity = 98/189 (51.85%), Postives = 132/189 (69.84%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH---EPVDQYEVVLG 60
           +TSAASA+TA  NI+ LALANLI GLF++GHNL  LK ++ R  S    E VD+Y+ VLG
Sbjct: 140 VTSAASADTATLNILALALANLIGGLFVIGHNLWELKNDESRVPSSQTDELVDRYQKVLG 199

Query: 61  NRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGKA 120
            ++N++LH ++AI+SFI+FGLVP +VY  +F +SNN+D K+AA   AS LCII+LAIGKA
Sbjct: 200 KKDNFLLHASVAILSFIVFGLVPPVVYSFSFRQSNNRDLKMAAVAVASLLCIIILAIGKA 259

Query: 121 SIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLPL 180
             Q+P     Y KT+  Y+ I    G  SY+AGDL+DK I+K   WF  + S     LPL
Sbjct: 260 YTQKPPK---YIKTLLYYVAIGIGVGGVSYLAGDLIDKLIEKLG-WFSSNVSG---TLPL 319

Query: 181 PEMSLAEPA 187
           P+M++ +PA
Sbjct: 320 PQMAIVKPA 321

[Close]
BLAST of CmoCh08G002330.1 vs. TrEMBL
Match: A0A072TXA8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_8g012900 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 92/177 (51.98%), Postives = 123/177 (69.49%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSHEPV-DQYEVVLGNR 60
           +TSAASA+ A  NI+ LA+ANLI GLF LGH+LR LK  + +R++ E V DQY  VLG R
Sbjct: 359 VTSAASADAATLNIVALAIANLIGGLFALGHSLRELKANEPKRSNTEAVVDQYNEVLGQR 418

Query: 61  ENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGKASI 120
           +N++LH  +AI+SFI+FGL+P +VY  TF +++ KDFKLAA  GAS LCI LL+I KA I
Sbjct: 419 KNFILHAFIAILSFIIFGLIPPVVYGFTFRENDEKDFKLAAVAGASLLCITLLSIAKAYI 478

Query: 121 QRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLP 177
           +RP ++  Y +TV  Y+   A A   SY+AGD++ K I+K   WFE + S    N P
Sbjct: 479 KRPNSYSTYFQTVFYYVSTGAVATVLSYLAGDMMKKLIEKLG-WFEPASSFDLQNQP 534

[Close]
BLAST of CmoCh08G002330.1 vs. TrEMBL
Match: A0A072TKY1_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_8g012900 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 92/177 (51.98%), Postives = 123/177 (69.49%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSHEPV-DQYEVVLGNR 60
           +TSAASA+ A  NI+ LA+ANLI GLF LGH+LR LK  + +R++ E V DQY  VLG R
Sbjct: 400 VTSAASADAATLNIVALAIANLIGGLFALGHSLRELKANEPKRSNTEAVVDQYNEVLGQR 459

Query: 61  ENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGKASI 120
           +N++LH  +AI+SFI+FGL+P +VY  TF +++ KDFKLAA  GAS LCI LL+I KA I
Sbjct: 460 KNFILHAFIAILSFIIFGLIPPVVYGFTFRENDEKDFKLAAVAGASLLCITLLSIAKAYI 519

Query: 121 QRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLP 177
           +RP ++  Y +TV  Y+   A A   SY+AGD++ K I+K   WFE + S    N P
Sbjct: 520 KRPNSYSTYFQTVFYYVSTGAVATVLSYLAGDMMKKLIEKLG-WFEPASSFDLQNQP 575

[Close]
BLAST of CmoCh08G002330.1 vs. TrEMBL
Match: B9T3C2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1750150 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.8e-38
Identity = 98/194 (50.52%), Postives = 129/194 (66.49%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH---EPVDQYEVVLG 60
           +TSAASA+  I N +VLALANL+ GLFI+GHNLR LK EQ    S+   EPVD+Y+ +LG
Sbjct: 393 VTSAASADATILNTMVLALANLVGGLFIMGHNLRELKNEQPESNSNQTNEPVDRYQELLG 452

Query: 61  NRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGKA 120
            R+N+ LH T+AI+SF++FGLVP +VY  +F KS+N D+KLAA   AS LCI +LAI KA
Sbjct: 453 KRQNFFLHATVAILSFLVFGLVPPVVYGFSFRKSDNMDYKLAAVAAASLLCITILAICKA 512

Query: 121 SIQR-PKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLP 180
            ++R PKN   Y +TV  Y V+   A   SY+AG+L+ K I+K   +     S   + +P
Sbjct: 513 YVRRPPKN---YIETVLHYAVVGLMASGVSYLAGELIKKLIEKLGLF----NSEVAVTMP 572

Query: 181 LPEMSLAEP-AWGS 190
             EMS   P AW S
Sbjct: 573 RSEMSSGRPAAWAS 579

[Close]
BLAST of CmoCh08G002330.1 vs. TAIR10
Match: AT4G27870.1 (AT4G27870.1 Vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.0e-29
Identity = 69/178 (38.76%), Postives = 115/178 (64.61%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTS---------HEPVDQ 60
           ++SAA +  ++ NI+VL LANL+ GL ++ HNL+ L+ E+  RT+          E   +
Sbjct: 564 ISSAAGSGASMLNILVLGLANLLGGLILIIHNLQELREEEPIRTTTEDNQTNGREEEEGR 623

Query: 61  YEVVLGNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIIL 120
           Y+ +LG REN+ LH T+AI+SFI+ G++P +VY  +F++ +NKD+K+A+  GAS  CI+L
Sbjct: 624 YKRLLGRRENFTLHATVAILSFIITGILPPVVYYFSFSEKHNKDYKVASVFGASLFCIVL 683

Query: 121 LAIGKASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRS 170
           LAI KA ++ P+   +Y K++  Y  IA      SY+ G+ L++ ++K+  W + S +
Sbjct: 684 LAIAKAHVRYPRG--SYLKSILYYGSIAVSVSGISYVVGNFLEQLLEKHG-WSDGSET 738

[Close]
BLAST of CmoCh08G002330.1 vs. TAIR10
Match: AT5G24290.1 (AT5G24290.1 Vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 100.9 bits (250), Expect = 8.9e-22
Identity = 57/163 (34.97%), Postives = 97/163 (59.51%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSHEPVDQYEVVLGNRE 60
           ++SA+++ ++  NI+ LA+ANL  GL +L  N + L     R +S +  D+YE +LG R 
Sbjct: 365 VSSASASGSSTMNILALAVANLAGGLIVLAQNFQDL-----RNSSDQEKDRYEELLGRRT 424

Query: 61  NYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGKASIQ 120
              +H  +A++S+I FGL+P LVY  +F ++  K++KL +    S +C+ILL   K  ++
Sbjct: 425 KSRIHILVAVMSYIFFGLIPPLVYAFSFYETGIKNYKLISVFLGSLVCVILLGSIKVYVR 484

Query: 121 RPKN----WDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKK 160
           +P N      AY K+ A Y  I   +   SY+ GD++ ++I+K
Sbjct: 485 KPTNSCGSTKAYLKSAAYYTSIVVASCGISYVVGDIMGEYIEK 522

[Close]
BLAST of CmoCh08G002330.1 vs. TAIR10
Match: AT4G27860.1 (AT4G27860.1 vacuolar iron transporter (VIT) family protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 67/182 (36.81%), Postives = 102/182 (56.04%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRR---TSHEPV------DQ 60
           +TSAA++  +  N++ L +ANL  GL +  H+L+ L  E+ R+   T   P       D+
Sbjct: 432 VTSAAASGASTLNVLALGVANLSSGLLLTVHSLQELINEKPRKQTNTDDSPEEGEGEEDR 491

Query: 61  YEVVLGNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNK--DFKLAAAVGASFLCI 120
           YE VLG RE   +H  +AI SF++FGL+P LVY  +F K   K  ++K+ A    S LCI
Sbjct: 492 YEEVLGRREYSRIHRVIAISSFVIFGLIPPLVYGFSFRKKMEKRQEYKVLAVYAVSLLCI 551

Query: 121 ILLAIGKASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKK---YNDWFER 169
           +LL+I KA + + ++   Y KT+  Y   A  A  FS   G L+ ++++K   Y+D  E 
Sbjct: 552 VLLSIAKAYVSKKRD---YVKTLFRYTTTATTASGFSQFVGYLVSQWLEKSGFYDDSPET 610

[Close]
BLAST of CmoCh08G002330.1 vs. NCBI nr
Match: gi|659116407|ref|XP_008458058.1| (PREDICTED: uncharacterized protein LOC103497596 isoform X3 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63
Identity = 132/193 (68.39%), Postives = 152/193 (78.76%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH----EPVDQYEVVL 60
           +TSAASANT  GNI+VL+LANLI GLFILGHNL GLK+EQFR ++     + VD+YEVVL
Sbjct: 547 VTSAASANTGTGNIVVLSLANLISGLFILGHNLTGLKSEQFRTSNETDDDDHVDRYEVVL 606

Query: 61  GNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGK 120
           GNRENY+LH  LAI SF+LFGLVP LVY  +FTKSN+KD KL A  GAS LCI LLA+GK
Sbjct: 607 GNRENYILHFVLAIFSFVLFGLVPPLVYGFSFTKSNDKDLKLTAVAGASLLCITLLALGK 666

Query: 121 ASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLP 180
           A IQRP  WD Y KTV +YIVIAA AG FSY+AG+L+DK +KKY  WFE +  AF L LP
Sbjct: 667 AYIQRPNRWDVYIKTVVSYIVIAAGAGGFSYLAGNLIDKCVKKYG-WFEEN-PAFNLGLP 726

Query: 181 LPEMSLAEPAWGS 190
           LPEMSL + AWGS
Sbjct: 727 LPEMSLVKAAWGS 737

[Close]
BLAST of CmoCh08G002330.1 vs. NCBI nr
Match: gi|659116405|ref|XP_008458057.1| (PREDICTED: uncharacterized protein LOC103497596 isoform X2 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63
Identity = 132/193 (68.39%), Postives = 152/193 (78.76%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH----EPVDQYEVVL 60
           +TSAASANT  GNI+VL+LANLI GLFILGHNL GLK+EQFR ++     + VD+YEVVL
Sbjct: 608 VTSAASANTGTGNIVVLSLANLISGLFILGHNLTGLKSEQFRTSNETDDDDHVDRYEVVL 667

Query: 61  GNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGK 120
           GNRENY+LH  LAI SF+LFGLVP LVY  +FTKSN+KD KL A  GAS LCI LLA+GK
Sbjct: 668 GNRENYILHFVLAIFSFVLFGLVPPLVYGFSFTKSNDKDLKLTAVAGASLLCITLLALGK 727

Query: 121 ASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLP 180
           A IQRP  WD Y KTV +YIVIAA AG FSY+AG+L+DK +KKY  WFE +  AF L LP
Sbjct: 728 AYIQRPNRWDVYIKTVVSYIVIAAGAGGFSYLAGNLIDKCVKKYG-WFEEN-PAFNLGLP 787

Query: 181 LPEMSLAEPAWGS 190
           LPEMSL + AWGS
Sbjct: 788 LPEMSLVKAAWGS 798

[Close]
BLAST of CmoCh08G002330.1 vs. NCBI nr
Match: gi|659116403|ref|XP_008458056.1| (PREDICTED: uncharacterized protein LOC103497596 isoform X1 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63
Identity = 132/193 (68.39%), Postives = 152/193 (78.76%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH----EPVDQYEVVL 60
           +TSAASANT  GNI+VL+LANLI GLFILGHNL GLK+EQFR ++     + VD+YEVVL
Sbjct: 611 VTSAASANTGTGNIVVLSLANLISGLFILGHNLTGLKSEQFRTSNETDDDDHVDRYEVVL 670

Query: 61  GNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGK 120
           GNRENY+LH  LAI SF+LFGLVP LVY  +FTKSN+KD KL A  GAS LCI LLA+GK
Sbjct: 671 GNRENYILHFVLAIFSFVLFGLVPPLVYGFSFTKSNDKDLKLTAVAGASLLCITLLALGK 730

Query: 121 ASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLP 180
           A IQRP  WD Y KTV +YIVIAA AG FSY+AG+L+DK +KKY  WFE +  AF L LP
Sbjct: 731 AYIQRPNRWDVYIKTVVSYIVIAAGAGGFSYLAGNLIDKCVKKYG-WFEEN-PAFNLGLP 790

Query: 181 LPEMSLAEPAWGS 190
           LPEMSL + AWGS
Sbjct: 791 LPEMSLVKAAWGS 801

[Close]
BLAST of CmoCh08G002330.1 vs. NCBI nr
Match: gi|659116409|ref|XP_008458059.1| (PREDICTED: uncharacterized protein LOC103497596 isoform X4 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 1.2e-63
Identity = 132/193 (68.39%), Postives = 152/193 (78.76%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH----EPVDQYEVVL 60
           +TSAASANT  GNI+VL+LANLI GLFILGHNL GLK+EQFR ++     + VD+YEVVL
Sbjct: 538 VTSAASANTGTGNIVVLSLANLISGLFILGHNLTGLKSEQFRTSNETDDDDHVDRYEVVL 597

Query: 61  GNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGK 120
           GNRENY+LH  LAI SF+LFGLVP LVY  +FTKSN+KD KL A  GAS LCI LLA+GK
Sbjct: 598 GNRENYILHFVLAIFSFVLFGLVPPLVYGFSFTKSNDKDLKLTAVAGASLLCITLLALGK 657

Query: 121 ASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSAFRLNLP 180
           A IQRP  WD Y KTV +YIVIAA AG FSY+AG+L+DK +KKY  WFE +  AF L LP
Sbjct: 658 AYIQRPNRWDVYIKTVVSYIVIAAGAGGFSYLAGNLIDKCVKKYG-WFEEN-PAFNLGLP 717

Query: 181 LPEMSLAEPAWGS 190
           LPEMSL + AWGS
Sbjct: 718 LPEMSLVKAAWGS 728

[Close]
BLAST of CmoCh08G002330.1 vs. NCBI nr
Match: gi|449464120|ref|XP_004149777.1| (PREDICTED: uncharacterized protein LOC101210214 isoform X1 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 3.4e-63
Identity = 133/194 (68.56%), Postives = 150/194 (77.32%), Query Frame = 1 

Query: 1   MTSAASANTAIGNIIVLALANLIRGLFILGHNLRGLKTEQFRRTSH----EPVDQYEVVL 60
           +TSAAS NT   NI+VL+LANLI GLFILGHNL GLK+EQFR ++     + VD+YEVVL
Sbjct: 610 VTSAASGNTGTRNIVVLSLANLISGLFILGHNLTGLKSEQFRTSNETDDDDRVDRYEVVL 669

Query: 61  GNRENYVLHCTLAIISFILFGLVPTLVYVLTFTKSNNKDFKLAAAVGASFLCIILLAIGK 120
           GNRENY+LH  LAI SF+ FGLVP LVY  +FTKSN+KD KLAA  GAS LCIILLA+GK
Sbjct: 670 GNRENYILHFVLAIFSFVFFGLVPPLVYGFSFTKSNDKDLKLAAVAGASLLCIILLALGK 729

Query: 121 ASIQRPKNWDAYAKTVATYIVIAAWAGSFSYMAGDLLDKFIKKYNDWFERSRSA-FRLNL 180
           A IQRP  WD Y KTVA+YIVIAA AG FSY+AG L+DK IKKY  WFE    A F L L
Sbjct: 730 AYIQRPNRWDVYIKTVASYIVIAAGAGGFSYLAGSLIDKCIKKYG-WFEEENPASFNLGL 789

Query: 181 PLPEMSLAEPAWGS 190
           PLPEMSL + AWGS
Sbjct: 790 PLPEMSLVKAAWGS 802

The following BLAST results are available for this feature:
BLAST of CmoCh08G002330.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MEBL_ARATH3.5e-2838.76Membrane protein of ER body-like protein OS=Arabidopsis thaliana GN=MEBL PE=2 SV... [more]
MEB2_ARATH1.6e-2034.97Membrane protein of ER body 2 OS=Arabidopsis thaliana GN=MEB2 PE=1 SV=1[more]
MEB1_ARATH3.5e-2036.81Membrane protein of ER body 1 OS=Arabidopsis thaliana GN=MEB1 PE=1 SV=1[more]
BLAST of CmoCh08G002330.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9Z7_CUCSA2.3e-6368.56Uncharacterized protein OS=Cucumis sativus GN=Csa_7G352490 PE=4 SV=1[more]
M5VZT0_PRUPE7.3e-4151.85Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008617mg PE=4 SV=1[more]
A0A072TXA8_MEDTR2.0e-3851.98Uncharacterized protein OS=Medicago truncatula GN=MTR_8g012900 PE=4 SV=1[more]
A0A072TKY1_MEDTR2.0e-3851.98Uncharacterized protein OS=Medicago truncatula GN=MTR_8g012900 PE=4 SV=1[more]
B9T3C2_RICCO5.8e-3850.52Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1750150 PE=4 SV=1[more]
BLAST of CmoCh08G002330.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27870.12.0e-2938.76 Vacuolar iron transporter (VIT) family protein[more]
AT5G24290.18.9e-2234.97 Vacuolar iron transporter (VIT) family protein[more]
AT4G27860.12.0e-2136.81 vacuolar iron transporter (VIT) family protein[more]
BLAST of CmoCh08G002330.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116407|ref|XP_008458058.1|1.2e-6368.39PREDICTED: uncharacterized protein LOC103497596 isoform X3 [Cucumis melo][more]
gi|659116405|ref|XP_008458057.1|1.2e-6368.39PREDICTED: uncharacterized protein LOC103497596 isoform X2 [Cucumis melo][more]
gi|659116403|ref|XP_008458056.1|1.2e-6368.39PREDICTED: uncharacterized protein LOC103497596 isoform X1 [Cucumis melo][more]
gi|659116409|ref|XP_008458059.1|1.2e-6368.39PREDICTED: uncharacterized protein LOC103497596 isoform X4 [Cucumis melo][more]
gi|449464120|ref|XP_004149777.1|3.4e-6368.56PREDICTED: uncharacterized protein LOC101210214 isoform X1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh08G002330CmoCh08G002330gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh08G002330.1CmoCh08G002330.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G002330.1.three_prime_UTR.1CmoCh08G002330.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G002330.1.CDS.3CmoCh08G002330.1.CDS.3CDS
CmoCh08G002330.1.CDS.2CmoCh08G002330.1.CDS.2CDS
CmoCh08G002330.1.CDS.1CmoCh08G002330.1.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G002330.1.five_prime_UTR.8CmoCh08G002330.1.five_prime_UTR.8five_prime_UTR
CmoCh08G002330.1.five_prime_UTR.7CmoCh08G002330.1.five_prime_UTR.7five_prime_UTR
CmoCh08G002330.1.five_prime_UTR.6CmoCh08G002330.1.five_prime_UTR.6five_prime_UTR
CmoCh08G002330.1.five_prime_UTR.5CmoCh08G002330.1.five_prime_UTR.5five_prime_UTR
CmoCh08G002330.1.five_prime_UTR.4CmoCh08G002330.1.five_prime_UTR.4five_prime_UTR
CmoCh08G002330.1.five_prime_UTR.3CmoCh08G002330.1.five_prime_UTR.3five_prime_UTR
CmoCh08G002330.1.five_prime_UTR.2CmoCh08G002330.1.five_prime_UTR.2five_prime_UTR
CmoCh08G002330.1.five_prime_UTR.1CmoCh08G002330.1.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G002330.1.exon.10CmoCh08G002330.1.exon.10exon
CmoCh08G002330.1.exon.9CmoCh08G002330.1.exon.9exon
CmoCh08G002330.1.exon.8CmoCh08G002330.1.exon.8exon
CmoCh08G002330.1.exon.7CmoCh08G002330.1.exon.7exon
CmoCh08G002330.1.exon.6CmoCh08G002330.1.exon.6exon
CmoCh08G002330.1.exon.5CmoCh08G002330.1.exon.5exon
CmoCh08G002330.1.exon.4CmoCh08G002330.1.exon.4exon
CmoCh08G002330.1.exon.3CmoCh08G002330.1.exon.3exon
CmoCh08G002330.1.exon.2CmoCh08G002330.1.exon.2exon
CmoCh08G002330.1.exon.1CmoCh08G002330.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31851FAMILY NOT NAMEDcoord: 2..186
score: 2.7
NoneNo IPR availablePANTHERPTHR31851:SF16MEMBRANE PROTEIN OF ER BODY 2coord: 2..186
score: 2.7