CmoCh08G001160.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G001160.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	E3 ubiquitin-protein ligase (6.3.2.-)
Location	Cmo_Chr08 : 602767 .. 605274 (+)
Sequence length	1425

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCCATCCGAAATTGGGTCTGAAAAAGGAAGGGAAAAGAAAAAACCCCTTCGATTTTTAACTAATTTCTCGTTTTCTTATTAATAAATTTCCCTTCTCTCAATTTCTCCGATCTCAAAACCGCCCATTTGAGCCCTCCGATCAACAATTTTCAATCATTTTTCCGATCATTCTTCAGATTCCGTCAAGCCGGCGATATTAATGGCGGAATCATCTGACCCATCAAAACCCATCAATGGATTCTGATGTTCTTCCGATTGTCGGAGCGGAATCATTAATCATTCCAAGTCGGAGAGGCTTATTATTTTCCGAAAATGGAGTTGGATGGCCTCGAACGCGCGCCGCCGTCCATGGACGTGATGAACGAGGAGGACAAGACCCTTCAATGTCACTGTCAGTTTCCGTCGATTTCCAAGCCTCGGATCAGCAATAACGACAATCCGACCACTACAAGTGTCCACGAGCTGCTGGAATGTCCTGTCTGCACTAATTCTATGTATCCTCCAATTCATCAGGTTCCTTCAAGTTCGTTGCTGTTTTTGTTTCAATTCGTTTGGTGTTTGTGGTTTCTGATCTGTTTGATTATGCTGAAGCTGTGGGTTTGTTGTTTCAGAAATGTTCTGTTTAATGAGGCCTTTGGTTCATGAAATGAGTATCAATTGTTTGGTTAAACCCTTGCTGTTGCATATACTCATTTGCAAAATGAATAGCTTTTTTTGTTGTTTAGAGACAATTGTTGCTGTGCTTTAGCTTGTTATGTATCCTCGTCAGCCTCACGGTTTTAAAATCCGTCTACTAGAGAGAGATTTCCACACCCTCCATTGGGGAAGTGGGGTTCCTCTGTGTGACCTTGTGTAACAAGCCTAGCAGATATTGTTCACTTTGGCTTGTTATGTATCGTCGTTAGTCTCACGGTTGTAAAATCCATCAACTAGAGAGAGATTTCCACACCCTCCATTGGGGAAGGGGGGCTCCTCTTTGTGACCTCGTGTAACAAGCCTAGCAGATATTGTTCGCTTTGACTTGTTATGTATCGTCGTCAGTCTCACGGTTTTAAAATTTGTCTACTTGGGAGAGATTTACACACCCTTGTGAAGATACGTAACGGGTCAAAATGGACCATATCAACTAGCGGTAGGCTTGGGCGGTTACAAATGGTATCAAAGTCAGACACCAAGCTGTTTGTTAGTGAGGATAATGAACCGTCAAGAGGAATGGATTGTGAGATCCCACGATGGTTAGAGAGGGGAACGAAACATTCCTTAAAGGGTGTGGAAACCTCTCCCTGGGCAAACACGTTTTAAGGTCGTGAGGTTGATAGCGATACGTAACGAGTCAAAGCAAACAAGATTTGTGAGCAGTGAACTTGGACTATAAGAGGATGTTTTTTATAACCAGGATTTTATTATTGAGAACTCGGATTCTACCTTGAGATCTGTGGCTTCATCAAATGAGAAGATATTGCTGAATGTTGTGAACTTATTGTTTTGTTTGTGCAGTGTCCCAATGGACATACCCTCTGTTCTTCGTGTAAAACGAAGGTAGACAACCGTTGCCCGACGTGCAGACAAGAGCTCGGTGATATTAGATGTCTAGCATTAGAAAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCTCGGAGATATTGCCGTACTATAGTAAACTAAAACATGAATCTGCCTGTTACTTCAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGGGAGATTCCTTTCCTTGTTTCTCATCTTCGAGATGATCACAAAGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTACGTAAAGGCTAATCCATGCGAAGTTGAAAACGCTATATGGATGTTAACTGTGAGTATCTGTTGAACGATTTCACGAGACGATATCCAAGATCACGTCTTACTTCTTACGCGAGCTTCTGTTGATGGCTCTTATTTCACCTTTGTGCAGGTCTTCCACTGTTTTGACCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTTGGTATGGCACCAGTTTACATGGTGTTTCTCCGATTCATGGGCGACGAAACAGACGCCCGAAACTACAGTTACAGCCTCGAGGCCGGTGGGAATGGGAGGAAGCTAACGTGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTCCGAGACAGCCACGATGGCCTCATTATACATCGAAACATGGCACTGTTCTTCTCGGGCGGGGAAAGGAAAGAGCTGAAGTTGCGGATCATGGGACGGATTTGGAAAGAACAAAATAAGCAGTGATATTGTTGTTGAATCAGCTCATAAGTCTTTGCCAATCCTAATAAACAGTGTACACAAAGGTCTTGAAACCATCTTCGACTCCAACTTCTTGTAATTGGGAATAGCTTACAACATTAAACATTGAAGCTTGTTTTGAAAACTGTGTTCTTAGTTGTTCTTTTTCCAATAAGAAAAAAAGAGCAGAAAAGACAAA

mRNA sequence

GACCCATCCGAAATTGGGTCTGAAAAAGGAAGGGAAAAGAAAAAACCCCTTCGATTTTTAACTAATTTCTCGTTTTCTTATTAATAAATTTCCCTTCTCTCAATTTCTCCGATCTCAAAACCGCCCATTTGAGCCCTCCGATCAACAATTTTCAATCATTTTTCCGATCATTCTTCAGATTCCGTCAAGCCGGCGATATTAATGGCGGAATCATCTGACCCATCAAAACCCATCAATGGATTCTGATGTTCTTCCGATTGTCGGAGCGGAATCATTAATCATTCCAAGTCGGAGAGGCTTATTATTTTCCGAAAATGGAGTTGGATGGCCTCGAACGCGCGCCGCCGTCCATGGACGTGATGAACGAGGAGGACAAGACCCTTCAATGTCACTGTCAGTTTCCGTCGATTTCCAAGCCTCGGATCAGCAATAACGACAATCCGACCACTACAAGTGTCCACGAGCTGCTGGAATGTCCTGTCTGCACTAATTCTATGTATCCTCCAATTCATCAGTGTCCCAATGGACATACCCTCTGTTCTTCGTGTAAAACGAAGGTAGACAACCGTTGCCCGACGTGCAGACAAGAGCTCGGTGATATTAGATGTCTAGCATTAGAAAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCTCGGAGATATTGCCGTACTATAGTAAACTAAAACATGAATCTGCCTGTTACTTCAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGGGAGATTCCTTTCCTTGTTTCTCATCTTCGAGATGATCACAAAGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTACGTAAAGGCTAATCCATGCGAAGTTGAAAACGCTATATGGATGTTAACTGTCTTCCACTGTTTTGACCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTTGGTATGGCACCAGTTTACATGGTGTTTCTCCGATTCATGGGCGACGAAACAGACGCCCGAAACTACAGTTACAGCCTCGAGGCCGGTGGGAATGGGAGGAAGCTAACGTGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTCCGAGACAGCCACGATGGCCTCATTATACATCGAAACATGGCACTGTTCTTCTCGGGCGGGGAAAGGAAAGAGCTGAAGTTGCGGATCATGGGACGGATTTGGAAAGAACAAAATAAGCAGTGATATTGTTGTTGAATCAGCTCATAAGTCTTTGCCAATCCTAATAAACAGTGTACACAAAGGTCTTGAAACCATCTTCGACTCCAACTTCTTGTAATTGGGAATAGCTTACAACATTAAACATTGAAGCTTGTTTTGAAAACTGTGTTCTTAGTTGTTCTTTTTCCAATAAGAAAAAAAGAGCAGAAAAGACAAA

Coding sequence (CDS)

ATGGAGTTGGATGGCCTCGAACGCGCGCCGCCGTCCATGGACGTGATGAACGAGGAGGACAAGACCCTTCAATGTCACTGTCAGTTTCCGTCGATTTCCAAGCCTCGGATCAGCAATAACGACAATCCGACCACTACAAGTGTCCACGAGCTGCTGGAATGTCCTGTCTGCACTAATTCTATGTATCCTCCAATTCATCAGTGTCCCAATGGACATACCCTCTGTTCTTCGTGTAAAACGAAGGTAGACAACCGTTGCCCGACGTGCAGACAAGAGCTCGGTGATATTAGATGTCTAGCATTAGAAAAAATAGCCGAATCGCTTAAACTGGCTTGTAAATTCTGCACGTTCGGGTGCTCGGAGATATTGCCGTACTATAGTAAACTAAAACATGAATCTGCCTGTTACTTCAGACCATATACCTGCCCTTATGCTGGATCAGACTGCCCAATTGATGGGGAGATTCCTTTCCTTGTTTCTCATCTTCGAGATGATCACAAAGTCGATATGCATTCTGGATGCACGTTTAATCATCGTTACGTAAAGGCTAATCCATGCGAAGTTGAAAACGCTATATGGATGTTAACTGTCTTCCACTGTTTTGACCAGTATTTCTGTCTTCATTTTGAAGCCTTTCAGCTTGGTATGGCACCAGTTTACATGGTGTTTCTCCGATTCATGGGCGACGAAACAGACGCCCGAAACTACAGTTACAGCCTCGAGGCCGGTGGGAATGGGAGGAAGCTAACGTGGGAAGGCAACCCTCGAAGCATTCGGGACAACCACAAGAAAGTCCGAGACAGCCACGATGGCCTCATTATACATCGAAACATGGCACTGTTCTTCTCGGGCGGGGAAAGGAAAGAGCTGAAGTTGCGGATCATGGGACGGATTTGGAAAGAACAAAATAAGCAGTGA

Homology

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BLAST of CmoCh08G001160.1 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 6.0e-139
Identity = 231/315 (73.33%), Postives = 262/315 (83.17%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDN-----------PTTTSVH 60
           M+LD ++    +MDV ++E+     H  + S+SK   +NN+            PTTTSVH
Sbjct: 1   MDLDSMD-CTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVH 60

Query: 61  ELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLK 120
           ELLECPVCTNSMYPPIHQC NGHTLCS+CK +V NRCPTCRQELGDIRCLALEK+AESL+
Sbjct: 61  ELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLE 120

Query: 121 LACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVD 180
           L CK  + GC EI PYYSKLKHE+ C FRPY+CPYAGS+C + G+IPFLV+HLRDDHKVD
Sbjct: 121 LPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVD 180

Query: 181 MHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGD 240
           MHSGCTFNHRYVK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGD
Sbjct: 181 MHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 240

Query: 241 ETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKE 300
           ET+ARNY+YSLE GG GRKL WEG PRS+RD+H+KVRDSHDGLII RNMALFFSGG+RKE
Sbjct: 241 ETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKE 300

Query: 301 LKLRIMGRIWKEQNK 305
           LKLR+ GRIWKEQ +
Sbjct: 301 LKLRVTGRIWKEQQQ 313

[Close]

BLAST of CmoCh08G001160.1 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 469.2 bits (1206), Expect = 3.5e-131
Identity = 218/291 (74.91%), Postives = 245/291 (84.19%), Query Frame = 1


Query: 12  SMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNSMYPPIHQCPNG 71
           S+D + ++D+  Q H QF S      +       TSV+ELLECPVCTNSMYPPIHQC NG
Sbjct: 5   SIDSVIDDDEIHQKH-QFSSTKSQGGATVVISPATSVYELLECPVCTNSMYPPIHQCHNG 64

Query: 72  HTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCSEILPYYSKLKH 131
           HTLCS+CK++V NRCPTCRQELGDIRCLALEK+AESL+L CK+   GC  I PYYSKLKH
Sbjct: 65  HTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKH 124

Query: 132 ESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENA 191
           ES C FRPY+CPYAGS+C   G+I FLV+HLRDDHKVDMH+GCTFNHRYVK+NP EVENA
Sbjct: 125 ESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENA 184

Query: 192 IWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSLEAGGNGRKLTW 251
            WMLTVF CF QYFCLHFEAFQLGMAPVYM FLRFMGDE DARNY+YSLE GG+GRK TW
Sbjct: 185 TWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTW 244

Query: 252 EGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWKEQ 303
           EG PRS+RD+H+KVRDSHDGLII RNMALFFSGG++KELKLR+ GRIWKEQ
Sbjct: 245 EGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]

BLAST of CmoCh08G001160.1 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 4.6e-131
Identity = 216/271 (79.70%), Postives = 238/271 (87.82%), Query Frame = 1


Query: 37  ISNNDNPT----TTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQE 96
           ++N   PT     TSV+ELLECPVCT SMYPPIHQC NGHTLCS+CK +V NRCPTCRQE
Sbjct: 43  VTNIVGPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQE 102

Query: 97  LGDIRCLALEKIAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPID 156
           LGDIRCLALEK+AESL+L CKF   GC EI PYYSKLKHES C FRPY+CPYAGS+C I 
Sbjct: 103 LGDIRCLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIV 162

Query: 157 GEIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAF 216
           G+IPFLV+HLRDDHKVDMH+G TFNHRYVK+NP EVENA WMLTVFHCF QYFCLHFEAF
Sbjct: 163 GDIPFLVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF 222

Query: 217 QLGMAPVYMVFLRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGL 276
           QLGM PVYM FLRFMGDE DAR+YSYSLE GG+GRKLTWEG PRSIRD+H+KVRDS+DGL
Sbjct: 223 QLGMGPVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGL 282

Query: 277 IIHRNMALFFSGGERKELKLRIMGRIWKEQN 304
           II RNMALFFSGG+RKELKLR+ G+IWKEQ+
Sbjct: 283 IIQRNMALFFSGGDRKELKLRVTGKIWKEQH 313

[Close]

BLAST of CmoCh08G001160.1 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.5e-121
Identity = 193/259 (74.52%), Postives = 224/259 (86.49%), Query Frame = 1


Query: 44  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEK 103
           +   V+ELLECPVCTN MYPPIHQCPNGHTLCS+CK +V N CPTCR ELG+IRCLALEK
Sbjct: 50  SNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEK 109

Query: 104 IAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLR 163
           +AESL++ C++   GC +I PYYSKLKHE  C FRPYTCPYAGS+C + G+IP LV HL+
Sbjct: 110 VAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLK 169

Query: 164 DDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVF 223
           DDHKVDMH GCTFNHRYVK+NP EVENA WMLTVF+CF + FCLHFEAFQLGMAPVYM F
Sbjct: 170 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 229

Query: 224 LRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFS 283
           LRFMGDE +A+ +SYSLE G +GRKLTW+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 230 LRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 289

Query: 284 GGERKELKLRIMGRIWKEQ 303
           GG+R+ELKLR+ GRIWKE+
Sbjct: 290 GGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CmoCh08G001160.1 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 3.1e-119
Identity = 189/259 (72.97%), Postives = 222/259 (85.71%), Query Frame = 1


Query: 44  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEK 103
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK +V N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 104 IAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLR 163
           +AESL++ C++   GC +I PYYSKLKHE  C FR Y+CPYAGS+C + G+IP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 164 DDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVF 223
           DDHKVDMH GCTFNHRYVK+NP EVENA WMLTVF+CF + FCLHFEAFQLGMAPVYM F
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 224 LRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFS 283
           LRFMGDE +A+ +SYSLE G + RKLTW+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 284 GGERKELKLRIMGRIWKEQ 303
           G +++ELKLR+ GRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of CmoCh08G001160.1 vs. TrEMBL
Match: A0A0A0KF08_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_6G087840 PE=3 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 3.8e-172
Identity = 284/305 (93.11%), Postives = 291/305 (95.41%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60
           MELDG++   PSMDVM+EEDKTLQ HCQFPSISKPRI+NNDNPTTTSVHELLECPVCTNS
Sbjct: 1   MELDGID-GMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120
           MYPPIHQCPNGHTLCSSCKT+VDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC 
Sbjct: 61  MYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQ 120

Query: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EILPYYSKLKHESACY+RPYTCPYAGSDCPIDG IPFLVSHLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240
           VKANPCEVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGDETDARN+SYSL
Sbjct: 181 VKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSL 240

Query: 241 EAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300
           E GGNGRKL WEGNPRSIRDNHKKVRDSHDGLII RNMALFFSGGERKELKLRI GRIWK
Sbjct: 241 EVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWK 300

Query: 301 EQNKQ 306
           EQNKQ
Sbjct: 301 EQNKQ 304

[Close]

BLAST of CmoCh08G001160.1 vs. TrEMBL
Match: M5XLI4_PRUPE (E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 6.9e-142
Identity = 237/302 (78.48%), Postives = 263/302 (87.09%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60
           ME DG+E    S+D+M+E++   + H  F S+ KP  ++ + P TTSVHELLECPVCTNS
Sbjct: 1   MESDGIESVT-SLDMMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120
           MYPPIHQC NGHTLCS+CKT+V NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GC 
Sbjct: 61  MYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCP 120

Query: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EI PYYSKLKHE+ C FRPY CPYAGSDC   G+IPFLV+HLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EIFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240
           VK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGM PVYM FLRFMGDET+ARNY+YSL
Sbjct: 181 VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSL 240

Query: 241 EAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300
           E GGNGRKL WEGNPRSIRD+HKKVRDSHDGLII RNMALFFSGG+RKELKLR+ GRIWK
Sbjct: 241 EVGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWK 300

Query: 301 EQ 303
           EQ
Sbjct: 301 EQ 300

[Close]

BLAST of CmoCh08G001160.1 vs. TrEMBL
Match: V4U1Z4_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.5e-141
Identity = 241/311 (77.49%), Postives = 264/311 (84.89%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDN---------PTTTSVHEL 60
           MEL  +E   PS D+ +E++       QFPSISKP  + N+N         P TTSVHEL
Sbjct: 1   MELHSIE-CVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHEL 60

Query: 61  LECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLA 120
           LECPVCTNSMYPPIHQC NGHTLCS+CKT+V NRCPTCRQELGDIRCLALEK+AESL+L 
Sbjct: 61  LECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELP 120

Query: 121 CKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMH 180
           CK+ + GC EI PYYSKLKHE+ C FRPY CPYAGS+C I G+IPFLV+HLRDDHKVDMH
Sbjct: 121 CKYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMH 180

Query: 181 SGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDET 240
           SGCTFNHRYVK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGDET
Sbjct: 181 SGCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET 240

Query: 241 DARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELK 300
           +ARNY+YSLE GGNGRKLTWEG PRSIRD+HKKVRDSHDGLII RNMALFFSGG+RKELK
Sbjct: 241 EARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELK 300

Query: 301 LRIMGRIWKEQ 303
           LR+ GRIWKEQ
Sbjct: 301 LRVTGRIWKEQ 310

[Close]

BLAST of CmoCh08G001160.1 vs. TrEMBL
Match: A0A067H6D5_CITSI (E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.5e-141
Identity = 241/311 (77.49%), Postives = 264/311 (84.89%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDN---------PTTTSVHEL 60
           MEL  +E   PS D+ +E++       QFPSISKP  + N+N         P TTSVHEL
Sbjct: 1   MELHSIE-CVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHEL 60

Query: 61  LECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLA 120
           LECPVCTNSMYPPIHQC NGHTLCS+CKT+V NRCPTCRQELGDIRCLALEK+AESL+L 
Sbjct: 61  LECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELP 120

Query: 121 CKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMH 180
           CK+ + GC EI PYYSKLKHE+ C FRPY CPYAGS+C I G+IPFLV+HLRDDHKVDMH
Sbjct: 121 CKYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMH 180

Query: 181 SGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDET 240
           SGCTFNHRYVK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGDET
Sbjct: 181 SGCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDET 240

Query: 241 DARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELK 300
           +ARNY+YSLE GGNGRKLTWEG PRSIRD+HKKVRDSHDGLII RNMALFFSGG+RKELK
Sbjct: 241 EARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELK 300

Query: 301 LRIMGRIWKEQ 303
           LR+ GRIWKEQ
Sbjct: 301 LRVTGRIWKEQ 310

[Close]

BLAST of CmoCh08G001160.1 vs. TrEMBL
Match: A0A067K098_JATCU (E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_14254 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 6.5e-140
Identity = 238/319 (74.61%), Postives = 265/319 (83.07%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPR--------ISNNDNPTTT------ 60
           MELD +E  P S   + +ED+    H QFPS+ KP+        I+NN+N  +       
Sbjct: 1   MELDCIETVPSSD--LTDEDEIHHHHHQFPSVPKPQSNNININIINNNNNNNSNTVSSAI 60

Query: 61  ---SVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEK 120
              SVHELLECPVCTNSMYPPIHQC NGHTLCS+CKT+V NRCPTCRQELGDIRCLALEK
Sbjct: 61  QSISVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEK 120

Query: 121 IAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLR 180
           +AESL+L CK+ + GC EI PYYSKLKHE+ C FRPY+CPYAGS+C + G+IPFLV+HLR
Sbjct: 121 VAESLELPCKYMSLGCPEIFPYYSKLKHEALCNFRPYSCPYAGSECAVVGDIPFLVAHLR 180

Query: 181 DDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVF 240
           DDHKVDMHSGCTFNHRYVK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM F
Sbjct: 181 DDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAF 240

Query: 241 LRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFS 300
           LRFMGDET+ARNYSYSLE GGNGRKL WEG PRSIRD+H+KVRDSHDGLII RNMALFFS
Sbjct: 241 LRFMGDETEARNYSYSLEVGGNGRKLVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFS 300

Query: 301 GGERKELKLRIMGRIWKEQ 303
           GG+RKELKLR+ GRIWKEQ
Sbjct: 301 GGDRKELKLRVTGRIWKEQ 317

[Close]

BLAST of CmoCh08G001160.1 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 495.0 bits (1273), Expect = 3.4e-140
Identity = 231/315 (73.33%), Postives = 262/315 (83.17%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDN-----------PTTTSVH 60
           M+LD ++    +MDV ++E+     H  + S+SK   +NN+            PTTTSVH
Sbjct: 1   MDLDSMD-CTSTMDVTDDEEIHQDRH-SYASVSKHHHTNNNTTNVNAAASGLLPTTTSVH 60

Query: 61  ELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLK 120
           ELLECPVCTNSMYPPIHQC NGHTLCS+CK +V NRCPTCRQELGDIRCLALEK+AESL+
Sbjct: 61  ELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLE 120

Query: 121 LACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVD 180
           L CK  + GC EI PYYSKLKHE+ C FRPY+CPYAGS+C + G+IPFLV+HLRDDHKVD
Sbjct: 121 LPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVD 180

Query: 181 MHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGD 240
           MHSGCTFNHRYVK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGD
Sbjct: 181 MHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 240

Query: 241 ETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKE 300
           ET+ARNY+YSLE GG GRKL WEG PRS+RD+H+KVRDSHDGLII RNMALFFSGG+RKE
Sbjct: 241 ETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKE 300

Query: 301 LKLRIMGRIWKEQNK 305
           LKLR+ GRIWKEQ +
Sbjct: 301 LKLRVTGRIWKEQQQ 313

[Close]

BLAST of CmoCh08G001160.1 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 468.8 bits (1205), Expect = 2.6e-132
Identity = 216/271 (79.70%), Postives = 238/271 (87.82%), Query Frame = 1


Query: 37  ISNNDNPT----TTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQE 96
           ++N   PT     TSV+ELLECPVCT SMYPPIHQC NGHTLCS+CK +V NRCPTCRQE
Sbjct: 43  VTNIVGPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQE 102

Query: 97  LGDIRCLALEKIAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPID 156
           LGDIRCLALEK+AESL+L CKF   GC EI PYYSKLKHES C FRPY+CPYAGS+C I 
Sbjct: 103 LGDIRCLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIV 162

Query: 157 GEIPFLVSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAF 216
           G+IPFLV+HLRDDHKVDMH+G TFNHRYVK+NP EVENA WMLTVFHCF QYFCLHFEAF
Sbjct: 163 GDIPFLVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF 222

Query: 217 QLGMAPVYMVFLRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGL 276
           QLGM PVYM FLRFMGDE DAR+YSYSLE GG+GRKLTWEG PRSIRD+H+KVRDS+DGL
Sbjct: 223 QLGMGPVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGL 282

Query: 277 IIHRNMALFFSGGERKELKLRIMGRIWKEQN 304
           II RNMALFFSGG+RKELKLR+ G+IWKEQ+
Sbjct: 283 IIQRNMALFFSGGDRKELKLRVTGKIWKEQH 313

[Close]

BLAST of CmoCh08G001160.1 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2)

HSP 1 Score: 437.2 bits (1123), Expect = 8.4e-123
Identity = 193/259 (74.52%), Postives = 224/259 (86.49%), Query Frame = 1


Query: 44  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEK 103
           +   V+ELLECPVCTN MYPPIHQCPNGHTLCS+CK +V N CPTCR ELG+IRCLALEK
Sbjct: 50  SNNGVYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEK 109

Query: 104 IAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLR 163
           +AESL++ C++   GC +I PYYSKLKHE  C FRPYTCPYAGS+C + G+IP LV HL+
Sbjct: 110 VAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLK 169

Query: 164 DDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVF 223
           DDHKVDMH GCTFNHRYVK+NP EVENA WMLTVF+CF + FCLHFEAFQLGMAPVYM F
Sbjct: 170 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 229

Query: 224 LRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFS 283
           LRFMGDE +A+ +SYSLE G +GRKLTW+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 230 LRFMGDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 289

Query: 284 GGERKELKLRIMGRIWKEQ 303
           GG+R+ELKLR+ GRIWKE+
Sbjct: 290 GGDRQELKLRVTGRIWKEE 308

[Close]

BLAST of CmoCh08G001160.1 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 429.5 bits (1103), Expect = 1.7e-120
Identity = 189/259 (72.97%), Postives = 222/259 (85.71%), Query Frame = 1


Query: 44  TTTSVHELLECPVCTNSMYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEK 103
           ++  V+ELLECPVCTN MYPPIHQCPNGHTLCSSCK +V N CPTCR ELG+IRCLALEK
Sbjct: 47  SSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEK 106

Query: 104 IAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLR 163
           +AESL++ C++   GC +I PYYSKLKHE  C FR Y+CPYAGS+C + G+IP LV HL+
Sbjct: 107 VAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLK 166

Query: 164 DDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVF 223
           DDHKVDMH GCTFNHRYVK+NP EVENA WMLTVF+CF + FCLHFEAFQLGMAPVYM F
Sbjct: 167 DDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAF 226

Query: 224 LRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFS 283
           LRFMGDE +A+ +SYSLE G + RKLTW+G PRSIRD+H+KVRDS DGLII RN+AL+FS
Sbjct: 227 LRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFS 286

Query: 284 GGERKELKLRIMGRIWKEQ 303
           G +++ELKLR+ GRIWKE+
Sbjct: 287 GSDKEELKLRVTGRIWKEE 305

[Close]

BLAST of CmoCh08G001160.1 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein)

HSP 1 Score: 358.2 bits (918), Expect = 4.9e-99
Identity = 162/204 (79.41%), Postives = 180/204 (88.24%), Query Frame = 1


Query: 99  LALEKIAESLKLACKFCTFGCSEILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFL 158
           +ALEK+AESL+L CK+   GC  I PYYSKLKHES C FRPY+CPYAGS+C   G+I FL
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 159 VSHLRDDHKVDMHSGCTFNHRYVKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAP 218
           V+HLRDDHKVDMH+GCTFNHRYVK+NP EVENA WMLTVF CF QYFCLHFEAFQLGMAP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 219 VYMVFLRFMGDETDARNYSYSLEAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNM 278
           VYM FLRFMGDE DARNY+YSLE GG+GRK TWEG PRS+RD+H+KVRDSHDGLII RNM
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 279 ALFFSGGERKELKLRIMGRIWKEQ 303
           ALFFSGG++KELKLR+ GRIWKEQ
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]

BLAST of CmoCh08G001160.1 vs. NCBI nr
Match: gi|449445654|ref|XP_004140587.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus])

HSP 1 Score: 612.1 bits (1577), Expect = 5.4e-172
Identity = 284/305 (93.11%), Postives = 291/305 (95.41%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60
           MELDG++   PSMDVM+EEDKTLQ HCQFPSISKPRI+NNDNPTTTSVHELLECPVCTNS
Sbjct: 1   MELDGID-GMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120
           MYPPIHQCPNGHTLCSSCKT+VDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC 
Sbjct: 61  MYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQ 120

Query: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EILPYYSKLKHESACY+RPYTCPYAGSDCPIDG IPFLVSHLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240
           VKANPCEVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGDETDARN+SYSL
Sbjct: 181 VKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSL 240

Query: 241 EAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300
           E GGNGRKL WEGNPRSIRDNHKKVRDSHDGLII RNMALFFSGGERKELKLRI GRIWK
Sbjct: 241 EVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWK 300

Query: 301 EQNKQ 306
           EQNKQ
Sbjct: 301 EQNKQ 304

[Close]

BLAST of CmoCh08G001160.1 vs. NCBI nr
Match: gi|659120058|ref|XP_008459990.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo])

HSP 1 Score: 610.5 bits (1573), Expect = 1.6e-171
Identity = 283/305 (92.79%), Postives = 291/305 (95.41%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60
           MELDG++   PSMDVM+EEDKTLQ HCQFPSISKPRI+NNDNPTTTSVHELLECPVCTNS
Sbjct: 1   MELDGID-GMPSMDVMDEEDKTLQRHCQFPSISKPRINNNDNPTTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120
           MYPPIHQCPNGHTLCSSCKT+VDNRCPTCRQELGDIRCLALEKIAESLKLACKF TFGC 
Sbjct: 61  MYPPIHQCPNGHTLCSSCKTRVDNRCPTCRQELGDIRCLALEKIAESLKLACKFSTFGCQ 120

Query: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EILPYYSKLKHESACY+RPYTCPYAGSDCPIDG IPFLVSHLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EILPYYSKLKHESACYYRPYTCPYAGSDCPIDGNIPFLVSHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240
           VKANPCEVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGDE+DARN+SYSL
Sbjct: 181 VKANPCEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESDARNFSYSL 240

Query: 241 EAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300
           E GGNGRKL WEGNPRSIRDNHKKVRDSHDGLII RNMALFFSGGERKELKLRI GRIWK
Sbjct: 241 EVGGNGRKLIWEGNPRSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWK 300

Query: 301 EQNKQ 306
           EQNKQ
Sbjct: 301 EQNKQ 304

[Close]

BLAST of CmoCh08G001160.1 vs. NCBI nr
Match: gi|1009142384|ref|XP_015888695.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Ziziphus jujuba])

HSP 1 Score: 520.0 bits (1338), Expect = 2.8e-144
Identity = 243/302 (80.46%), Postives = 264/302 (87.42%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60
           ME D +E  PPS DVM +ED+      QF ++SKP  + N N +TTSVHELLECPVCTNS
Sbjct: 1   MESDCIETVPPS-DVM-DEDEIQGRPLQFLTVSKPLSNTNSNSSTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120
           MYPPIHQC NGHTLCS+CKT V NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GCS
Sbjct: 61  MYPPIHQCHNGHTLCSTCKTMVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCS 120

Query: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EI PYYSKLKHES C FRPY CPYAGSDC + G+IPFLV+HLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EIFPYYSKLKHESLCNFRPYNCPYAGSDCSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240
           VK+NP EVENA WMLTVFHCF QYFCLHFEAFQL MAPVYM FLRFMGDET+ARNYSYSL
Sbjct: 181 VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLEMAPVYMAFLRFMGDETEARNYSYSL 240

Query: 241 EAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300
           E GGNGRKL WEGNPRSIRD+H+KVRDSHDGLII RNMALFFSGG+RKELKLR+ GRIWK
Sbjct: 241 EVGGNGRKLIWEGNPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWK 300

Query: 301 EQ 303
           EQ
Sbjct: 301 EQ 300

[Close]

BLAST of CmoCh08G001160.1 vs. NCBI nr
Match: gi|470141909|ref|XP_004306667.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 515.8 bits (1327), Expect = 5.3e-143
Identity = 238/302 (78.81%), Postives = 265/302 (87.75%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60
           M+ + +E  PPS D+M +ED+      Q  ++ KPR + N+NP TTSVHELLECPVCTNS
Sbjct: 1   MDPENMEIVPPS-DLM-DEDEIHGRPRQLFTVPKPRNNGNNNPGTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120
           MYPPIHQC NGHTLCS+CKT+V NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GC 
Sbjct: 61  MYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCP 120

Query: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EI PYYSKLKHE+ C FRPY CPYAGSDC + G+IPFLV+HLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EIFPYYSKLKHEAVCNFRPYNCPYAGSDCSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240
           VK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGMAPVYM FLRFMGDET+ARNY+YSL
Sbjct: 181 VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYTYSL 240

Query: 241 EAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300
           E GGNGRK+ WEGNPRSIRD+HKKVRDSHDGLII RNMALFFSGG+RKELKLR+ GRIWK
Sbjct: 241 EVGGNGRKIIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWK 300

Query: 301 EQ 303
           EQ
Sbjct: 301 EQ 300

[Close]

BLAST of CmoCh08G001160.1 vs. NCBI nr
Match: gi|645254668|ref|XP_008233143.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X2 [Prunus mume])

HSP 1 Score: 511.5 bits (1316), Expect = 9.9e-142
Identity = 237/302 (78.48%), Postives = 263/302 (87.09%), Query Frame = 1


Query: 1   MELDGLERAPPSMDVMNEEDKTLQCHCQFPSISKPRISNNDNPTTTSVHELLECPVCTNS 60
           ME DG+E    S+D+M+E++   + H  F S+ KP  ++ + P TTSVHELLECPVCTNS
Sbjct: 1   MESDGIESVT-SLDLMDEDEIHGRPH-HFVSVPKPHNNSINIPGTTSVHELLECPVCTNS 60

Query: 61  MYPPIHQCPNGHTLCSSCKTKVDNRCPTCRQELGDIRCLALEKIAESLKLACKFCTFGCS 120
           MYPPIHQC NGHTLCS+CKT+V NRCPTCRQELGDIRCLALEK+AESL+L CK+C+ GC 
Sbjct: 61  MYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCP 120

Query: 121 EILPYYSKLKHESACYFRPYTCPYAGSDCPIDGEIPFLVSHLRDDHKVDMHSGCTFNHRY 180
           EI PYYSKLKHE+ C FRPY CPYAGSDC   G+IPFLV+HLRDDHKVDMHSGCTFNHRY
Sbjct: 121 EIFPYYSKLKHEAVCNFRPYNCPYAGSDCSAVGDIPFLVTHLRDDHKVDMHSGCTFNHRY 180

Query: 181 VKANPCEVENAIWMLTVFHCFDQYFCLHFEAFQLGMAPVYMVFLRFMGDETDARNYSYSL 240
           VK+NP EVENA WMLTVFHCF QYFCLHFEAFQLGM PVYM FLRFMGDET+ARNY+YSL
Sbjct: 181 VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDETEARNYTYSL 240

Query: 241 EAGGNGRKLTWEGNPRSIRDNHKKVRDSHDGLIIHRNMALFFSGGERKELKLRIMGRIWK 300
           E GGNGRKL WEGNPRSIRD+HKKVRDSHDGLII RNMALFFSGG+RKELKLR+ GRIWK
Sbjct: 241 EVGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWK 300

Query: 301 EQ 303
           EQ
Sbjct: 301 EQ 300

The following BLAST results are available for this feature:

BLAST of CmoCh08G001160.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SINA3_ARATH	6.0e-139	73.33	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1	[more]
SINA5_ARATH	3.5e-131	74.91	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2	[more]
SINA4_ARATH	4.6e-131	79.70	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1	[more]
SINA2_ARATH	1.5e-121	74.52	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1	[more]
SINA1_ARATH	3.1e-119	72.97	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE...	[more]

BLAST of CmoCh08G001160.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF08_CUCSA	3.8e-172	93.11	E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_6G087840 PE=3 SV=1	[more]
M5XLI4_PRUPE	6.9e-142	78.48	E3 ubiquitin-protein ligase OS=Prunus persica GN=PRUPE_ppa008943mg PE=3 SV=1	[more]
V4U1Z4_9ROSI	1.5e-141	77.49	E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10021159mg PE=3 SV=1	[more]
A0A067H6D5_CITSI	1.5e-141	77.49	E3 ubiquitin-protein ligase OS=Citrus sinensis GN=CISIN_1g020592mg PE=3 SV=1	[more]
A0A067K098_JATCU	6.5e-140	74.61	E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_14254 PE=3 SV=1	[more]

BLAST of CmoCh08G001160.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61790.1	3.4e-140	73.33	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	2.6e-132	79.70	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	8.4e-123	74.52	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	1.7e-120	72.97	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	4.9e-99	79.41	TRAF-like superfamily protein	[more]

BLAST of CmoCh08G001160.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445654\|ref\|XP_004140587.1\|	5.4e-172	93.11	PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Cucumis sativus]	[more]
gi\|659120058\|ref\|XP_008459990.1\|	1.6e-171	92.79	PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis melo]	[more]
gi\|1009142384\|ref\|XP_015888695.1\|	2.8e-144	80.46	PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Ziziphus jujuba]	[more]
gi\|470141909\|ref\|XP_004306667.1\|	5.3e-143	78.81	PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Fragaria vesca subsp. vesca]	[more]
gi\|645254668\|ref\|XP_008233143.1\|	9.9e-142	78.48	PREDICTED: E3 ubiquitin-protein ligase SINAT3 isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR004162	SINA-like
IPR008974	TRAF-like
IPR013010	Znf_SIAH
IPR013083	Znf_RING/FYVE/PHD
IPR013323	SIAH-type domain
IPR018121	7-in-absentia-prot_TRAF-dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006511	ubiquitin-dependent protein catabolic process
GO:0007275	multicellular organism development
GO:0016567	protein ubiquitination

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh08G001160	CmoCh08G001160	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001160.1	CmoCh08G001160.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001160.1.exon.1	CmoCh08G001160.1.exon.1	exon
CmoCh08G001160.1.exon.2	CmoCh08G001160.1.exon.2	exon
CmoCh08G001160.1.exon.3	CmoCh08G001160.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001160.1.five_prime_UTR.1	CmoCh08G001160.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001160.1.CDS.1	CmoCh08G001160.1.CDS.1	CDS
CmoCh08G001160.1.CDS.2	CmoCh08G001160.1.CDS.2	CDS
CmoCh08G001160.1.CDS.3	CmoCh08G001160.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh08G001160.1.three_prime_UTR.1	CmoCh08G001160.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 54..90 score: 9
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	SEVEN IN ABSENTIA HOMOLOG	coord: 12..305 score: 2.2E
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 172..299 score: 2.3
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 107..298 score: 9.81
IPR013010	Zinc finger, SIAH-type	PROFILE	PS51081	ZF_SIAH	coord: 107..167 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 40..119 score: 2.5
IPR013323	SIAH-type domain	GENE3D	G3DSA:3.90.890.10		coord: 120..162 score: 3.3
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 96..294 score: 2.4
None	No IPR available	PANTHER	PTHR10315:SF34	E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED	coord: 12..305 score: 2.2E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 48..94 score: 2.6