CmoCh07G011720.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G011720.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	EF hand calcium-binding family protein
Location	Cmo_Chr07 : 6292807 .. 6294284 (+)
Sequence length	1020

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCCTCCGTCCTTACACTTATACAGAGTTTGCTCTCTTCTTCTTGTTCTTTGTTTTTCTTCTCCGGCCGGTGACCGCCGATCTTCTCTCTAGATTTCCTTGTTTCAGACTTTTTCTGAATCATTTTCTTGTAGATAAAGACTTCTGCATACGATTATCTTCTCGAGTGATCAGCAATGGCGGATCAACTCACCGACGATCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTCGACAAGGATGGCGACGGTTCGTTCTGATTCTATTCGATTATCTTTTGGTTGATTTTTATTTGATTCTGCACCGCTTTTCGTTGTCGTGTTCGTCAGTGTGCCGGATCTCTTGTTTCCATTTCTTCCTTTGGCATTGCTCTGTTTTTCGTTGGATTTTCTCCTTGCTATGTGTTTATTTTTTTATTTACACGGATTTTGTTATTCGTTTCGGTTTTTTTAAGAATTTGTTATTCTATTTTCTGCGATTCGTTTTGCGTGTTCGTTGGTGTTGGATCTGTGCATCCTTTTGCGGATTCAATATTGATTTCTAGTTTTGTATGACTTCGTTTAAACGTGGAAGCTCGTTTTTCCTGTGAGATGATTCTGATTCTGATTCTGAGTGAAAAATTTAATTACGATGGATGTCAATGTATCATAAGGATGTGGCGAATTCAATTCACTCATTTTTCCTTTGCCTTCATATCGATTTTACAGGTTGTATCACAACCAAGGAGCTTGGTACTGTTATGAGGTCACTAGGTCAGAATCCAACCGAAGCGGAGCTTCAGGACATGATTAATGAGGTCGATGCTGATGGCAATGGAACAATCGACTTTCCCGAGTTCCTAAACCTCATGGCTAGGAAGATGAAGGATACGGATTCCGAGGAGGAGTTGAAAGAGGCATTCCGAGTCTTCGATAAGGACCAGAATGGCTTCATCTCCGCTGCTGAGCTCCGCCATGTGATGACCAATCTCGGCGAGAAACTGACCGAGGAGGAGGTCGATGAGATGATCAGAGAGGCCGATGTGGATGGCGATGGCCAGATTAACTACGACGAATTCGTCAAGGTCATGATGGCCAAGTGAGAATCATGATGCCCCCCCTTCTACTATCACCAGAATTCAATGATAATAATTCTACTCAAAAAGCAAAAAAAAAATCGAGGGTTGGTTTACTTTATAACTGGATTCTCCTGATTTTCCCTTTGATTCCCGTCCATCAGTCTTCATCGTCAGTTTAAAAATTGGGGTTTTGTTTTATACAAAATCCTTATTAGGAAAATAGTTGTCTCTGCTTTGTTTGTGACGTCTTCAATTTGAATGTATCATTTGACAAGAAAAGTGTCTTCGCTGTTCCTCTTCTCTCCTTTTTCTTTGCCAACCTCTAATATGATTGATTATTTAGCCAAGTTACTTTAATCAACTTTTGTCCAACAGACGTGAATGATCCAGAATAGTTCAGAATTCTTAAATCACAG

mRNA sequence

TCTCTCCTCCGTCCTTACACTTATACAGAGTTTGCTCTCTTCTTCTTGTTCTTTGTTTTTCTTCTCCGGCCGGTGACCGCCGATCTTCTCTCTAGATTTCCTTGTTTCAGACTTTTTCTGAATCATTTTCTTGTAGATAAAGACTTCTGCATACGATTATCTTCTCGAGTGATCAGCAATGGCGGATCAACTCACCGACGATCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTCGACAAGGATGGCGACGGTTGTATCACAACCAAGGAGCTTGGTACTGTTATGAGGTCACTAGGTCAGAATCCAACCGAAGCGGAGCTTCAGGACATGATTAATGAGGTCGATGCTGATGGCAATGGAACAATCGACTTTCCCGAGTTCCTAAACCTCATGGCTAGGAAGATGAAGGATACGGATTCCGAGGAGGAGTTGAAAGAGGCATTCCGAGTCTTCGATAAGGACCAGAATGGCTTCATCTCCGCTGCTGAGCTCCGCCATGTGATGACCAATCTCGGCGAGAAACTGACCGAGGAGGAGGTCGATGAGATGATCAGAGAGGCCGATGTGGATGGCGATGGCCAGATTAACTACGACGAATTCGTCAAGGTCATGATGGCCAAGTGAGAATCATGATGCCCCCCCTTCTACTATCACCAGAATTCAATGATAATAATTCTACTCAAAAAGCAAAAAAAAAATCGAGGGTTGGTTTACTTTATAACTGGATTCTCCTGATTTTCCCTTTGATTCCCGTCCATCAGTCTTCATCGTCAGTTTAAAAATTGGGGTTTTGTTTTATACAAAATCCTTATTAGGAAAATAGTTGTCTCTGCTTTGTTTGTGACGTCTTCAATTTGAATGTATCATTTGACAAGAAAAGTGTCTTCGCTGTTCCTCTTCTCTCCTTTTTCTTTGCCAACCTCTAATATGATTGATTATTTAGCCAAGTTACTTTAATCAACTTTTGTCCAACAGACGTGAATGATCCAGAATAGTTCAGAATTCTTAAATCACAG

Coding sequence (CDS)

ATGGCGGATCAACTCACCGACGATCAGATCTCTGAGTTCAAGGAGGCCTTCAGCTTGTTCGACAAGGATGGCGACGGTTGTATCACAACCAAGGAGCTTGGTACTGTTATGAGGTCACTAGGTCAGAATCCAACCGAAGCGGAGCTTCAGGACATGATTAATGAGGTCGATGCTGATGGCAATGGAACAATCGACTTTCCCGAGTTCCTAAACCTCATGGCTAGGAAGATGAAGGATACGGATTCCGAGGAGGAGTTGAAAGAGGCATTCCGAGTCTTCGATAAGGACCAGAATGGCTTCATCTCCGCTGCTGAGCTCCGCCATGTGATGACCAATCTCGGCGAGAAACTGACCGAGGAGGAGGTCGATGAGATGATCAGAGAGGCCGATGTGGATGGCGATGGCCAGATTAACTACGACGAATTCGTCAAGGTCATGATGGCCAAGTGA

Homology

[Close]

BLAST of CmoCh07G011720.1 vs. Swiss-Prot
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3)

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-78
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. Swiss-Prot
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=3 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 2.9e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQI+EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 292.0 bits (746), Expect = 3.8e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 3.8e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2)

HSP 1 Score: 292.0 bits (746), Expect = 3.8e-78
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TrEMBL
Match: A0A0A0KYG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G340540 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TrEMBL
Match: A0A0N9LA80_CAMSI (Calmodulin 2 OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TrEMBL
Match: K4DI20_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TrEMBL
Match: Q38M72_SOLTU (Calmodulin OS=Solanum tuberosum GN=PGSC0003DMG400027384 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TrEMBL
Match: Q76ME6_TOBAC (Calmodulin NtCaM10 OS=Nicotiana tabacum GN=NtCaM10 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TAIR10
Match: AT3G43810.1 (AT3G43810.1 calmodulin 7)

HSP 1 Score: 292.0 bits (746), Expect = 2.1e-79
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TAIR10
Match: AT2G27030.3 (AT2G27030.3 calmodulin 5)

HSP 1 Score: 290.8 bits (743), Expect = 4.7e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMI+EADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TAIR10
Match: AT3G56800.1 (AT3G56800.1 calmodulin 3)

HSP 1 Score: 290.8 bits (743), Expect = 4.7e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMI+EADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIKEADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TAIR10
Match: AT5G21274.1 (AT5G21274.1 calmodulin 6)

HSP 1 Score: 290.4 bits (742), Expect = 6.2e-79
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKL++E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. TAIR10
Match: AT2G41110.2 (AT2G41110.2 calmodulin 2)

HSP 1 Score: 282.0 bits (720), Expect = 2.2e-76
Identity = 146/161 (90.68%), Postives = 149/161 (92.55%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGD------------GCITTKELGTVMRSLGQNPTEAE 60
           MADQLTDDQISEFKEAFSLFDKDGD            GCITTKELGTVMRSLGQNPTEAE
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGMLHPPFPSIIVGCITTKELGTVMRSLGQNPTEAE 60

Query: 61  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 120
           LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH
Sbjct: 61  LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 120

Query: 121 VMTNLGEKLTEEEVDEMIREADVDGDGQINYDEFVKVMMAK 150
           VMTNLGEKLT+EEVDEMI+EADVDGDGQINY+EFVKVMMAK
Sbjct: 121 VMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 161

[Close]

BLAST of CmoCh07G011720.1 vs. NCBI nr
Match: gi|659129294|ref|XP_008464615.1| (PREDICTED: calmodulin [Cucumis melo])

HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. NCBI nr
Match: gi|971538318|ref|XP_006340365.2| (PREDICTED: calmodulin-like [Solanum tuberosum])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. NCBI nr
Match: gi|922461111|ref|XP_013631799.1| (PREDICTED: calmodulin-like [Brassica oleracea var. oleracea])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. NCBI nr
Match: gi|1009287575|ref|NP_001308423.1| (calmodulin [Solanum lycopersicum])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

[Close]

BLAST of CmoCh07G011720.1 vs. NCBI nr
Match: gi|970062481|ref|XP_015058134.1| (PREDICTED: calmodulin-like [Solanum pennellii])

HSP 1 Score: 293.5 bits (750), Expect = 2.1e-76
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1


Query: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
           MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60

Query: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTEE 120
           NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLT+E
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120

Query: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 150
           EVDEMIREADVDGDGQINYDEFVKVMMAK
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMAK 149

The following BLAST results are available for this feature:

BLAST of CmoCh07G011720.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CALM_CAPAN	1.3e-78	99.33	Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3	[more]
CALM3_ORYSI	2.9e-78	98.66	Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=3 SV=2	[more]
CALM_EUPCH	3.8e-78	98.66	Calmodulin OS=Euphorbia characias PE=2 SV=4	[more]
CALM_BRYDI	3.8e-78	98.66	Calmodulin OS=Bryonia dioica PE=2 SV=2	[more]
CALM1_PETHY	3.8e-78	98.66	Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=1 SV=2	[more]

BLAST of CmoCh07G011720.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYG1_CUCSA	6.5e-77	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G340540 PE=4 SV=1	[more]
A0A0N9LA80_CAMSI	1.4e-76	99.33	Calmodulin 2 OS=Camellia sinensis PE=2 SV=1	[more]
K4DI20_SOLLC	1.4e-76	99.33	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
Q38M72_SOLTU	1.4e-76	99.33	Calmodulin OS=Solanum tuberosum GN=PGSC0003DMG400027384 PE=2 SV=1	[more]
Q76ME6_TOBAC	1.4e-76	99.33	Calmodulin NtCaM10 OS=Nicotiana tabacum GN=NtCaM10 PE=2 SV=1	[more]

BLAST of CmoCh07G011720.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43810.1	2.1e-79	98.66	calmodulin 7	[more]
AT2G27030.3	4.7e-79	97.99	calmodulin 5	[more]
AT3G56800.1	4.7e-79	97.99	calmodulin 3	[more]
AT5G21274.1	6.2e-79	97.99	calmodulin 6	[more]
AT2G41110.2	2.2e-76	90.68	calmodulin 2	[more]

BLAST of CmoCh07G011720.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129294\|ref\|XP_008464615.1\|	9.3e-77	100.00	PREDICTED: calmodulin [Cucumis melo]	[more]
gi\|971538318\|ref\|XP_006340365.2\|	2.1e-76	99.33	PREDICTED: calmodulin-like [Solanum tuberosum]	[more]
gi\|922461111\|ref\|XP_013631799.1\|	2.1e-76	99.33	PREDICTED: calmodulin-like [Brassica oleracea var. oleracea]	[more]
gi\|1009287575\|ref\|NP_001308423.1\|	2.1e-76	99.33	calmodulin [Solanum lycopersicum]	[more]
gi\|970062481\|ref\|XP_015058134.1\|	2.1e-76	99.33	PREDICTED: calmodulin-like [Solanum pennellii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh07G011720	CmoCh07G011720	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh07G011720.1	CmoCh07G011720.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G011720.1.exon.1	CmoCh07G011720.1.exon.1	exon
CmoCh07G011720.1.exon.2	CmoCh07G011720.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G011720.1.five_prime_UTR.1	CmoCh07G011720.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G011720.1.CDS.1	CmoCh07G011720.1.CDS.1	CDS
CmoCh07G011720.1.CDS.2	CmoCh07G011720.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G011720.1.three_prime_UTR.1	CmoCh07G011720.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 12..73 score: 1.9E-15coord: 83..146 score: 4.9
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 48..76 score: 2.5E-8coord: 12..40 score: 6.9E-8coord: 121..149 score: 6.1E-9coord: 85..113 score: 3.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 8..43 score: 16.661coord: 81..116 score: 17.554coord: 117..149 score: 15.294coord: 44..79 score: 14
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 3..68 score: 2.9E-42coord: 69..147 score: 1.3
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 2..147 score: 5.31
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 94..106 score: -coord: 21..33 score: -coord: 130..142 score: -coord: 57..69 scor
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 1..149 score: 4.4E
None	No IPR available	PANTHER	PTHR23050:SF153	CALMODULIN-1-RELATED	coord: 1..149 score: 4.4E