CmoCh07G005540.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G005540.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr07 : 2492750 .. 2496407 (-)
Sequence length	1050

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGCGAATGTGGAAAATGTGTTTATAAAGGGAAATACAGAGAGGAGAAGGGTTCGGTAGGTAGGATGAGAGGAGGAAGTGGAGAGGAGAGGCAGATTTCAAAGGGCTGGCGGCGTTGAATTAATAAATAATTTCACCAAACACACACTACAAATTAAACAAGACAAGACGAGAAAATAAAAACTGGGTCATCATATTTGACCAGCGGCAATGGTTCCTACCCAACAACCCTCCTTCCAACCCATTACCAAGCGGGGGCTCTGCTTTGAGAAAAGTCTGCTTTAACCAATTAGGAAAACACGGGGTAGGTGAGGCCAGAGATTGGATTATAAACCCTAAAACAAAAAATCTAACACAAATAAAGTTAATAATGAAGCAATGGCGGCTACCCTTCTCTCCCGGGATCGTTCCTTTGTTCATCTACTTCATGATTGATTATCTACCCATGACTTTCTTTTCTCTTTTTATTCAAAAAAACAAAATTATTGAAATTATATATAAAATTAATTTATACCGATCTTATCAACTACCGGTGATAATGATAATATAATATTTTAATTATGTTAATGAGGTAGATATATGATTTTATTGTTCAATTTTGTTAAAATATTTTTTTATAGTAAATATTGGGATAAGAGAGAAAAAAAATTAAATATTGACCATGACTATTGTTATTAAAAATCTACGTTTCAATTTGTTGTAATAAAAAAAGACTATATCTAATTCCCTATTACATTTTATACTTTCAGATTTAAGTAGTAAGGTGTTAGGGCGTGGTTGTAATAATCTAAAAATTTGAGGGTTTAATTGGAATAAGAATTTTAGGGATTTATGCAATTTTCAAGTTTTAAAGGTTAGCGATGATTTTTCGGCAAATTTTATTTAATCAACGTGGTTGAATAGTGGTCCACTCTTTGAATGAAGGACACGTGGTCCCTTTTCTTTTCCCATTATATGACGTGGCGCGGGAGAACTCTTCCATGCATTTTTAAAATTTAAATATAAAACGATTTTTATTTTAAATTTCTGAAACTCTCACAAAGTAATGAAAGGGCTAATTTGGGCCCTACTAACTATATGAAGGAGATATTTCATGCGTAAATAAATGTAATTCTACTTCTCCCTGAATTCATCAAATAAGGCTATCAAGGGCCCAAATTAGCGGATCAAGAAGGCCATGGCCCAAAGTAGCGGATCAAGAATGCCAGGGCCCAAAGTAGCGGATCAAGAAGGCCATGGCTCAAAGTAACGGATCAAGAAGGTCAGGGCCCAAAGTAGCGGATCAAGAATGCCAGGGCCCAAATTAGCGGATCAAGAAGGCCAGGGCCCAAAGTAGCGGATCAAGAAGGCCCAATACTTGGACGCTGGTGGTTATCCAGTTTAACGGTTACAGTTATATAGTAATAGATCGCGCGTAAATCATTGAATTAATCGCCGTTTCCCCCTTCCAGTTCGAGGTTCCTCTCTTACCCCTTCCCACTTCCATTTTCTACTCCGAAGAAGGGACCTATGTCCCGTTTCCCATGTCTGAAAAAACCCTAATTTATTGAATCAGACGCTCTGAAGGTCTAAATTCCAAAACGATGTCGCTTGCTTTCCAATACCTTTCACTGAGTTCGTCGTCTCCTTCCCCTCCCCCTTCTTCAACCTTATACTTCTCCGCCTTCTTGTCCCGGAATCCGTGCTTGTCTCTTCGATTCGCCCCTTGCCGATTCCCTAGCACTCTGCATTTTCAAATTCTTGATCACAAGCTTCGAAGCCCTTATAATTTTGGTTCCATTAATGCCCATCAGTTCAATCCTCGAGTTTCTATATCTGAAGGAGCTGGACGGAGAGACGGTGATGATTTCGATATTGATTCTTTACTTTCAGCTGCTGAGTTGTTTTGCCTCGTTACGTCGTTGCTCGCTTCTGTTGGTTTTGCTTTGAATTTTGTGAAAGCCAGCTCTAAGAGTGTGTTTTTGGCGGTCTTCGGTGATAGGATTTTGGTTGGCGCAATTTTGTTTCTGGTGGCGGGGGTTGCAATTGGTGCTTGGATTCGTAGGCGGCAGTGGAATCGGATATATCGAGAGACGGCGAAGGGTGTATTGGAGGCGAATTTGGTGGAAAGAACTAACAAACTGGAGGAGGATTTGAGGAATTCGGCAACGCTTATTCGAGTATTGTCGAGGCAGCTGGAGAAGCTGGGGAATAGGTTTAGAGATACTCGAAAGGCTCTGAAGAAGCCCGTCGAGGAGGTAATTATAGTTCTCAGAAATTTTGAGGCTGTTTCTTTATTTCGAAATTTCAAGATGATATTTAACAAGTAAATGATGGTCTCCCTTGGAGACACTAACATGATGCTGACAAAGAAGTCGTATCTGGATGGACCATCAAAATGCTCTGAAACCTTTGATATTTGTTAAAATAAATGAATGATTACTGTAATTTTGCAAAACAGAAAAAAAGGTGAATCATTTCTATAAAGAGGTGCCTCAAAGAAAATGATATCTGAATGGTAATTCTGGTTGTAGTTATTTGTAATTCCAATTTCTTGAATTCTGTAAATATGGAAGAAGAAACGAAGTGAACCCAGTACTGAAATTTTTGGCATTGAACTCCAGCAAAACCCCAATAGAATGTTATTGTTAAGGAGCCGAATCCTGAAATGTAAGTTAGGGGGCAGTTTCATAACTGCCAAACATACTTCCCACAAAAGACATGAAGCTGAGACTATGAGTGAGTTAATTGTAGTGGAATTACAAGGATGTATGGTAGTGAAGAAAATTTATGTGCTGTAGGGGTTCAGTAGCAATATGAAATAACACTTTGAGAAGGTGAAAATGAACTTTAAGGTGTGATAGAATCATTCTTTTAACCTTTATAACCAGGCTTGATAACTGTATTACTTACATTTTGCTAAGATGAGATGCCATTTTCCGCCTCTAAGTATTGATCAATTTCTGAAGACTGCAGCTTTAGCTCAAAAAACCTCTGAGGCCACTCGAGCATTGGCAGTTCGGGGAGATATTCTGGAGAACGAGCTTGGGGAAATCCAGAAGGTCTTACTAGCTATGCAGGTGCATTAAATCTTCTGTTGAACGTTAATTCAACGGTTTTAAGTTTTGTCAAGGAGTGAATTAAGTTAATACAGATGAAGCATAGGGTACTGGTGTTTAAGAAAGTTGGAATTCTGATTAAAAAGAAACTCAAAAGAACACAATATAAAAAGATAGAATAATGTATAACTATTTGGTTTTTGGCTTTTCAAAATTGAGCTTGTTTTCTCATCATAGTAAAAATTCAAATGGTAATGAAATAGGTTTGTTGTTTGATTATTGCATATTCTAGGAGTGTTTGACATCTAATCTGATTTGGATTTATTGTTTGAGTTGGGATTGTAGGAACAACAACAAAAGCAACTTGAGTTGATTCTAGCAATAGGGAAGTCGGGAAAGATATGGGAAAGCAGACAAGAGCGTAGTGGAGAACAAAGTCCTTTTGGAAGGCACGATCTGATCGACGAACGCATAAATCAAAAGGAAGTCCTAGACGTTTGAGCTCTTTGAAGAAGAGAATGGAGATGGCTTAGGATTCTTTTCATACAAATTGGAATGGTAGTTTTTGCATAATGACAGAATAGGATTAAGGACTGTAATGTTGGTGGCAGTTTAA

mRNA sequence

ATGGGTAGCGAATGTGGAAAATGTGTTTATAAAGGGAAATACAGAGAGGAGAAGGGTTCGGTAGGTCTAAATTCCAAAACGATGTCGCTTGCTTTCCAATACCTTTCACTGAGTTCGTCGTCTCCTTCCCCTCCCCCTTCTTCAACCTTATACTTCTCCGCCTTCTTGTCCCGGAATCCGTGCTTGTCTCTTCGATTCGCCCCTTGCCGATTCCCTAGCACTCTGCATTTTCAAATTCTTGATCACAAGCTTCGAAGCCCTTATAATTTTGGTTCCATTAATGCCCATCAGTTCAATCCTCGAGTTTCTATATCTGAAGGAGCTGGACGGAGAGACGGTGATGATTTCGATATTGATTCTTTACTTTCAGCTGCTGAGTTGTTTTGCCTCGTTACGTCGTTGCTCGCTTCTGTTGGTTTTGCTTTGAATTTTGTGAAAGCCAGCTCTAAGAGTGTGTTTTTGGCGGTCTTCGGTGATAGGATTTTGGTTGGCGCAATTTTGTTTCTGGTGGCGGGGGTTGCAATTGGTGCTTGGATTCGTAGGCGGCAGTGGAATCGGATATATCGAGAGACGGCGAAGGGTGTATTGGAGGCGAATTTGGTGGAAAGAACTAACAAACTGGAGGAGGATTTGAGGAATTCGGCAACGCTTATTCGAGTATTGTCGAGGCAGCTGGAGAAGCTGGGGAATAGGTTTAGAGATACTCGAAAGGCTCTGAAGAAGCCCGTCGAGGAGACTGCAGCTTTAGCTCAAAAAACCTCTGAGGCCACTCGAGCATTGGCAGTTCGGGGAGATATTCTGGAGAACGAGCTTGGGGAAATCCAGAAGGTCTTACTAGCTATGCAGGAACAACAACAAAAGCAACTTGAGTTGATTCTAGCAATAGGGAAGTCGGGAAAGATATGGGAAAGCAGACAAGAGCGTAGTGGAGAACAAAGTCCTTTTGGAAGGCACGATCTGATCGACGAACGCATAAATCAAAAGGAAGTCCTAGACTTTTTGCATAATGACAGAATAGGATTAAGGACTGTAATGTTGGTGGCAGTTTAA

Coding sequence (CDS)

ATGGGTAGCGAATGTGGAAAATGTGTTTATAAAGGGAAATACAGAGAGGAGAAGGGTTCGGTAGGTCTAAATTCCAAAACGATGTCGCTTGCTTTCCAATACCTTTCACTGAGTTCGTCGTCTCCTTCCCCTCCCCCTTCTTCAACCTTATACTTCTCCGCCTTCTTGTCCCGGAATCCGTGCTTGTCTCTTCGATTCGCCCCTTGCCGATTCCCTAGCACTCTGCATTTTCAAATTCTTGATCACAAGCTTCGAAGCCCTTATAATTTTGGTTCCATTAATGCCCATCAGTTCAATCCTCGAGTTTCTATATCTGAAGGAGCTGGACGGAGAGACGGTGATGATTTCGATATTGATTCTTTACTTTCAGCTGCTGAGTTGTTTTGCCTCGTTACGTCGTTGCTCGCTTCTGTTGGTTTTGCTTTGAATTTTGTGAAAGCCAGCTCTAAGAGTGTGTTTTTGGCGGTCTTCGGTGATAGGATTTTGGTTGGCGCAATTTTGTTTCTGGTGGCGGGGGTTGCAATTGGTGCTTGGATTCGTAGGCGGCAGTGGAATCGGATATATCGAGAGACGGCGAAGGGTGTATTGGAGGCGAATTTGGTGGAAAGAACTAACAAACTGGAGGAGGATTTGAGGAATTCGGCAACGCTTATTCGAGTATTGTCGAGGCAGCTGGAGAAGCTGGGGAATAGGTTTAGAGATACTCGAAAGGCTCTGAAGAAGCCCGTCGAGGAGACTGCAGCTTTAGCTCAAAAAACCTCTGAGGCCACTCGAGCATTGGCAGTTCGGGGAGATATTCTGGAGAACGAGCTTGGGGAAATCCAGAAGGTCTTACTAGCTATGCAGGAACAACAACAAAAGCAACTTGAGTTGATTCTAGCAATAGGGAAGTCGGGAAAGATATGGGAAAGCAGACAAGAGCGTAGTGGAGAACAAAGTCCTTTTGGAAGGCACGATCTGATCGACGAACGCATAAATCAAAAGGAAGTCCTAGACTTTTTGCATAATGACAGAATAGGATTAAGGACTGTAATGTTGGTGGCAGTTTAA

Homology

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BLAST of CmoCh07G005540.1 vs. TrEMBL
Match: A0A0A0KK16_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499810 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 8.2e-123
Identity = 249/312 (79.81%), Postives = 265/312 (84.94%), Query Frame = 1


Query: 23  LNSKTMSLAFQYLSLSSSSPSPPPSSTLYFSAFLSRNPCLSLRFAPCRFPSTLHFQILDH 82
           L S TMSL FQ LSL+S SPS   SST  FS FLSRNPC+SL F P RFP+TLHFQILD+
Sbjct: 69  LISNTMSLPFQSLSLTSPSPS---SSTFCFSTFLSRNPCVSLPFPPSRFPNTLHFQILDY 128

Query: 83  KLRSPYNFGSINAHQFNPRVSISEGAGRRDGD--DFDIDSLLSAAELFCLVTSLLASVGF 142
           K RSP+NFGSINAH F PRVS S G GRR G   DFDIDSLLSA E FCLV SL+ SVGF
Sbjct: 129 KFRSPFNFGSINAHHFCPRVSTSGGVGRRPGGVADFDIDSLLSATEFFCLVASLIGSVGF 188

Query: 143 ALNFVKASSKSVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVLEANL 202
           ALN  K  SKS+FLAVFGD +LVG ILFLVAGVAIGAWIRRRQWNR++RETAKGVLE NL
Sbjct: 189 ALNCAKTRSKSLFLAVFGDGVLVGTILFLVAGVAIGAWIRRRQWNRVFRETAKGVLEVNL 248

Query: 203 VERTNKLEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRAL 262
           +E+TNKLEEDLR+SATLIRVLSRQLEKLG RFR TRKALKKPVEETAALAQKTSEATRAL
Sbjct: 249 MEKTNKLEEDLRSSATLIRVLSRQLEKLGIRFRVTRKALKKPVEETAALAQKTSEATRAL 308

Query: 263 AVRGDILENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQERSGEQSPFGRHDL 322
           AVRGDILE EL EIQKVLLAMQEQQQKQL+LILAIG SGK+WESRQE SG QS  GRHDL
Sbjct: 309 AVRGDILEKELAEIQKVLLAMQEQQQKQLDLILAIGNSGKMWESRQEHSGGQSHVGRHDL 368

Query: 323 IDERINQKEVLD 333
           IDE +N KEV D
Sbjct: 369 IDEHLNGKEVQD 377

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BLAST of CmoCh07G005540.1 vs. TrEMBL
Match: W9QZ57_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022154 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 2.3e-72
Identity = 177/303 (58.42%), Postives = 209/303 (68.98%), Query Frame = 1


Query: 30  LAFQYLSLSSSSPSPPPSSTLYFSAFLSRN--PCLSLRFAPCRFPSTLHFQILDHKLRSP 89
           ++F  L L ++SP   P  TLYF+A   +N    L LR A   F S  HF I + +L SP
Sbjct: 1   MSFASLDLLTNSP---PRFTLYFAANPPKNHHTLLPLRIASRHFASRSHFHISNRQLPSP 60

Query: 90  YNFGSINAHQFNPRVSISEGAGRRDGDDFDIDSLLSAAELFCLVTSLLASVGFALNFVKA 149
               S   H+F   V  SEG  RRDGD  D DS LS  E  C+ +S + S+GFA+N V +
Sbjct: 61  CCSNSPRTHRFRLGVFESEGPVRRDGD-LDFDSFLSIVETLCVFSSAVVSLGFAVNCVVS 120

Query: 150 SSK-SVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVLEANLVERTNK 209
           SSK +V  A  G+ IL   +L +VAG+ IGAWIRRRQW R    + +G LE NL+ER  K
Sbjct: 121 SSKKTVMAAAMGNGILSCGMLVMVAGLGIGAWIRRRQWRRFCSGSVRGGLEVNLLERVEK 180

Query: 210 LEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRALAVRGDI 269
           LEEDLRNSATLIRV+SRQLEKLG RFR TRKALK+P+ ETAALAQK SEATRALAV+ DI
Sbjct: 181 LEEDLRNSATLIRVISRQLEKLGIRFRVTRKALKEPLAETAALAQKNSEATRALAVQEDI 240

Query: 270 LENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQERSGEQSPFGRHDLIDERIN 329
           LE ELGEIQKVLLAMQEQQQKQLELILAIGK+GK++E+R ERS EQ     HD   E + 
Sbjct: 241 LEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLFETRPERSQEQERIEIHDSTAESLK 299

[Close]

BLAST of CmoCh07G005540.1 vs. TrEMBL
Match: M5VZD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009241mg PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.5e-65
Identity = 160/288 (55.56%), Postives = 187/288 (64.93%), Query Frame = 1


Query: 45  PPSSTLYFSAFLSRNPCLSLRFAPCRFPSTLHFQILDHKLRSPYNFGSINAHQFNPRVSI 104
           PP  TLY +  L + P L          S  HF I +H L +P+N  S+++H    RV  
Sbjct: 13  PPRFTLYITTSLPKTPAL----LSLPITSRPHFPISNHSLPNPHNSTSLSSHHSRLRVYE 72

Query: 105 SEGAGRRD---GDDFDIDSLLSAAELFCLVTSLLASVGFALNFVKASSKSVFLAVFGDRI 164
           S+G  + +      F++D  L+ AE  CL +S + SVGFALN    S K   L   G+ +
Sbjct: 73  SDGTLQSNDVVNGAFNLDYFLTVAEFLCLASSAIVSVGFALNCAVLSLKKTALVAMGNSV 132

Query: 165 LVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVLEANLVERTNKLEEDLRNSATLIRVL 224
           L    + LV  V IGAWIR RQW RI RE+ KG LE NL ER  KLEEDLR+SAT+IRVL
Sbjct: 133 LASGAVALVMAVGIGAWIRMRQWRRICRESVKGGLEVNLFERIEKLEEDLRSSATIIRVL 192

Query: 225 SRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRALAVRGDILENELGEIQKVLLAM 284
           SRQLEKLG RFR TRKALK+P+ ETAALAQK SEATRALAV+ D LE ELGEIQKVLLAM
Sbjct: 193 SRQLEKLGIRFRVTRKALKEPIAETAALAQKNSEATRALAVQEDNLEKELGEIQKVLLAM 252

Query: 285 QEQQQKQLELILAIGKSGKIWESRQERSGEQSPFGRHDLIDERINQKE 330
           QEQQQKQLELILAI  SGK+ ESRQ R  EQS     D  +E   QKE
Sbjct: 253 QEQQQKQLELILAIATSGKLRESRQVRDQEQSTTIIRDSSEEDSKQKE 296

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BLAST of CmoCh07G005540.1 vs. TrEMBL
Match: A0A067K3Y0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18648 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.5e-57
Identity = 145/274 (52.92%), Postives = 187/274 (68.25%), Query Frame = 1


Query: 45  PPSSTLYFSAFLS---RNPCLSLRFAPCRFPSTLHFQILDHKLRSPYNFGSINAHQFNPR 104
           P   T YF+  +S   +NP +S R       ++ H Q   +K +S  NF ++ ++ F  +
Sbjct: 13  PSRITFYFTTPISLSLQNPNISPRILSRHLATSFHCQTFRYKPKSSLNF-TLKSNSFPLK 72

Query: 105 VSISEGA-GRRDGDDFDIDSLLSAAELFCLVTSLLASVGFALNFVKASSKSVFLAVFG-D 164
               +G       D F++D+ LS AE+ C+++S + +V +A+N    SSK    AV G +
Sbjct: 73  AYQYDGVVPTPSSDGFNLDAFLSIAEILCIISSAVVTVCYAVNSTFLSSKRTVFAVIGSN 132

Query: 165 RILVGAILFLVAGVAIGAWIRRRQWNRIYRETAK-GVLEANLVERTNKLEEDLRNSATLI 224
           R L   ++ ++ GV IGA IR+RQW R  R T + G    NLVER  KLEEDLR+SAT+I
Sbjct: 133 RALAWGLVVMMGGVLIGALIRKRQWLRFCRVTVREGRESVNLVERIEKLEEDLRSSATII 192

Query: 225 RVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRALAVRGDILENELGEIQKVL 284
           RVLSRQLEKLG RFR TRKALK+P+ ETAALA+K SEATRALA++ DILE ELGEIQKVL
Sbjct: 193 RVLSRQLEKLGIRFRVTRKALKEPIAETAALAKKNSEATRALAMQEDILEKELGEIQKVL 252

Query: 285 LAMQEQQQKQLELILAIGKSGKIWESRQERSGEQ 313
           LAMQEQQ+KQLELILAIGKSGK+WESRQE S +Q
Sbjct: 253 LAMQEQQEKQLELILAIGKSGKLWESRQEPSQQQ 285

[Close]

BLAST of CmoCh07G005540.1 vs. TrEMBL
Match: A0A059AKP1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00513 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-56
Identity = 153/299 (51.17%), Postives = 187/299 (62.54%), Query Frame = 1


Query: 29  SLAFQYLSLSSSSPSPPPSSTLYFSAFLS-RNPCLSLRFAPCRFPSTLHFQILDHKLRSP 88
           S A   LSL S+  + P   T +F  + S R P  S        P T H  +  +   S 
Sbjct: 12  SAAASRLSLCSTKNASPRRPTSFFPPYASQRVPAFSA-------PQT-HIVLPKNWPNSR 71

Query: 89  YNFGSINAHQFNPRVSISEGAGRRDG-DDFDIDSLLSAAELFCLVTSLLASVGFALNFVK 148
           +   S+    +  R   S+GA R +G   FD DS LS AEL CLV+S + SV FA+    
Sbjct: 72  HASASLKGCGYRVRAYPSDGAVRGEGVSHFDFDSFLSIAELLCLVSSAVVSVVFAV---- 131

Query: 149 ASSKSVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVL-EANLVERTN 208
              K       GDR+L   ++ LV GVA GAW+RRRQW R++ +  K  +   NLVER  
Sbjct: 132 ---KRAAFGAAGDRVLGWLVVALVGGVASGAWVRRRQWRRVFEQPGKAAVPNVNLVERVE 191

Query: 209 KLEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRALAVRGD 268
           KLEEDLR+S T+IRVLSRQLEKLG RFR TRK LK+P+ ETAALAQK SEATRALA++ D
Sbjct: 192 KLEEDLRSSTTMIRVLSRQLEKLGIRFRVTRKTLKEPIAETAALAQKNSEATRALAMQED 251

Query: 269 ILENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQ----ERSGEQSPFGRHDL 321
           ILE ELGEIQKVLLAMQ+QQQKQLELILAIGK+GK+WESR+    E + E +     DL
Sbjct: 252 ILEKELGEIQKVLLAMQDQQQKQLELILAIGKTGKLWESRRAPNPEHTNESASLAEEDL 295

[Close]

BLAST of CmoCh07G005540.1 vs. TAIR10
Match: AT5G65250.1 (AT5G65250.1 unknown protein)

HSP 1 Score: 178.7 bits (452), Expect = 6.1e-45
Identity = 136/320 (42.50%), Postives = 184/320 (57.50%), Query Frame = 1


Query: 27  TMSLAFQYLSLSSSSPSP-PPSSTLYFSAFLSRNPCLSLRFAPCRFPSTLHFQILDHKLR 86
           ++SL  +Y   S S+P      S L F+   +R    + R     FP  +    L H + 
Sbjct: 2   SLSLPSRYALFSGSTPVRISRRSNLCFAVSAAR----ASRRDSISFPQPI---FLRHVIS 61

Query: 87  SPYNF----------GSINAHQFNPRVSISEGAGRRDGDDFDIDSLLSAAELFCLVTSLL 146
           +  NF           SI + + +   ++ E A     D FD+ S +S AE  C+++S +
Sbjct: 62  TQSNFEIDRNYRAHASSIGSFEDSSSSNLLEDAS---SDGFDLGSFVSFAEALCILSSAV 121

Query: 147 ASVGFALNFVKASSKSVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGV 206
            SV  A+N+V            G ++L    + LV  VA G+W+RRRQW RI     KG 
Sbjct: 122 ISVVLAVNYVVVGE-------IGKKVLSLGFVGLVGSVATGSWLRRRQWMRI----CKGA 181

Query: 207 LEA---NLVERTNKLEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQK 266
            E+   NL+ R  KLE+DL++S +++RVLSR LEKLG RFR TRKALK+P+ ETAALAQK
Sbjct: 182 RESEGTNLIRRLEKLEKDLKSSTSIVRVLSRHLEKLGIRFRVTRKALKEPISETAALAQK 241

Query: 267 TSEATRALAVRGDILENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQERSGEQ 326
            SEATR L  + +ILE ELGEIQKVLLAMQEQQ+KQLELIL I KS K++ES    S +Q
Sbjct: 242 NSEATRVLVAQQEILEKELGEIQKVLLAMQEQQRKQLELILTIAKSSKLFES--STSSKQ 298

Query: 327 SPF-GRHDLIDERINQKEVL 332
           SP   R +  +E    K++L
Sbjct: 302 SPSEQRKNKAEEPSTPKQIL 298

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BLAST of CmoCh07G005540.1 vs. NCBI nr
Match: gi|449451421|ref|XP_004143460.1| (PREDICTED: uncharacterized protein LOC101207421 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 4.8e-124
Identity = 251/312 (80.45%), Postives = 267/312 (85.58%), Query Frame = 1


Query: 23  LNSKTMSLAFQYLSLSSSSPSPPPSSTLYFSAFLSRNPCLSLRFAPCRFPSTLHFQILDH 82
           L S TMSL FQ LSL+S SPS   SST  FS FLSRNPC+SL F P RFP+TLHFQILD+
Sbjct: 14  LISNTMSLPFQSLSLTSPSPS---SSTFCFSTFLSRNPCVSLPFPPSRFPNTLHFQILDY 73

Query: 83  KLRSPYNFGSINAHQFNPRVSISEGAGRRDGD--DFDIDSLLSAAELFCLVTSLLASVGF 142
           K RSP+NFGSINAH F PRVS S G GRR G   DFDIDSLLSA E FCLV SL+ SVGF
Sbjct: 74  KFRSPFNFGSINAHHFCPRVSTSGGVGRRPGGVADFDIDSLLSATEFFCLVASLIGSVGF 133

Query: 143 ALNFVKASSKSVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVLEANL 202
           ALN  K  SKS+FLAVFGD +LVG ILFLVAGVAIGAWIRRRQWNR++RETAKGVLE NL
Sbjct: 134 ALNCAKTRSKSLFLAVFGDGVLVGTILFLVAGVAIGAWIRRRQWNRVFRETAKGVLEVNL 193

Query: 203 VERTNKLEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRAL 262
           +E+TNKLEEDLR+SATLIRVLSRQLEKLG RFR TRKALKKPVEETAALAQKTSEATRAL
Sbjct: 194 MEKTNKLEEDLRSSATLIRVLSRQLEKLGIRFRVTRKALKKPVEETAALAQKTSEATRAL 253

Query: 263 AVRGDILENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQERSGEQSPFGRHDL 322
           AVRGDILE EL EIQKVLLAMQEQQQKQL+LILAIG SGK+WESRQE SG QS  GRHDL
Sbjct: 254 AVRGDILEKELAEIQKVLLAMQEQQQKQLDLILAIGNSGKMWESRQEHSGGQSHVGRHDL 313

Query: 323 IDERINQKEVLD 333
           IDER+NQKEV D
Sbjct: 314 IDERLNQKEVQD 322

[Close]

BLAST of CmoCh07G005540.1 vs. NCBI nr
Match: gi|659080048|ref|XP_008440583.1| (PREDICTED: uncharacterized protein LOC103484959 [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 6.9e-123
Identity = 251/316 (79.43%), Postives = 268/316 (84.81%), Query Frame = 1


Query: 23  LNSKTMSLAFQYLSLSSSSPSPPPSSTLYFSAFLSRNPCLSLRFAPCRFPSTLHFQILDH 82
           L+SKTMSL FQ LSL+S     P SSTL FS   SRNP +SL F P RFP+TLHFQILD+
Sbjct: 17  LHSKTMSLPFQSLSLTS-----PSSSTLCFSTLFSRNPSVSLGFPPSRFPNTLHFQILDY 76

Query: 83  KLRSPYNFGSINAHQFNPRVSISEGAGR------RDGDDFDIDSLLSAAELFCLVTSLLA 142
           K RSP+NFGSI+AHQF PRVS S G GR        G DFDIDSLLSAAELFCLV SL+ 
Sbjct: 77  KFRSPFNFGSIDAHQFCPRVSTSGGVGRIPGGGGGGGGDFDIDSLLSAAELFCLVASLIG 136

Query: 143 SVGFALNFVKASSKSVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVL 202
           SVGFALN  K  SKSVFLAVFGD +LVGAILFLVAGVAIGAWIRRRQWNR++RET KGVL
Sbjct: 137 SVGFALNCAKTRSKSVFLAVFGDGVLVGAILFLVAGVAIGAWIRRRQWNRVFRETVKGVL 196

Query: 203 EANLVERTNKLEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEA 262
           E NL+E+TNKLEEDLR+SATLIRVLSRQLEKLG RFR TRKALKKPVEETAALAQKTSEA
Sbjct: 197 EVNLMEKTNKLEEDLRSSATLIRVLSRQLEKLGIRFRVTRKALKKPVEETAALAQKTSEA 256

Query: 263 TRALAVRGDILENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQERSGEQSPFG 322
           TRALAVRGDILE EL EIQKVLLAMQEQQQKQLELILAIGKSGK+WESRQE SG QS  G
Sbjct: 257 TRALAVRGDILEKELAEIQKVLLAMQEQQQKQLELILAIGKSGKMWESRQEHSGGQSHIG 316

Query: 323 RHDLIDERINQKEVLD 333
           RHDLIDER+N+KEV D
Sbjct: 317 RHDLIDERLNRKEVQD 327

[Close]

BLAST of CmoCh07G005540.1 vs. NCBI nr
Match: gi|700193533|gb|KGN48737.1| (hypothetical protein Csa_6G499810 [Cucumis sativus])

HSP 1 Score: 448.4 bits (1152), Expect = 1.2e-122
Identity = 249/312 (79.81%), Postives = 265/312 (84.94%), Query Frame = 1


Query: 23  LNSKTMSLAFQYLSLSSSSPSPPPSSTLYFSAFLSRNPCLSLRFAPCRFPSTLHFQILDH 82
           L S TMSL FQ LSL+S SPS   SST  FS FLSRNPC+SL F P RFP+TLHFQILD+
Sbjct: 69  LISNTMSLPFQSLSLTSPSPS---SSTFCFSTFLSRNPCVSLPFPPSRFPNTLHFQILDY 128

Query: 83  KLRSPYNFGSINAHQFNPRVSISEGAGRRDGD--DFDIDSLLSAAELFCLVTSLLASVGF 142
           K RSP+NFGSINAH F PRVS S G GRR G   DFDIDSLLSA E FCLV SL+ SVGF
Sbjct: 129 KFRSPFNFGSINAHHFCPRVSTSGGVGRRPGGVADFDIDSLLSATEFFCLVASLIGSVGF 188

Query: 143 ALNFVKASSKSVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVLEANL 202
           ALN  K  SKS+FLAVFGD +LVG ILFLVAGVAIGAWIRRRQWNR++RETAKGVLE NL
Sbjct: 189 ALNCAKTRSKSLFLAVFGDGVLVGTILFLVAGVAIGAWIRRRQWNRVFRETAKGVLEVNL 248

Query: 203 VERTNKLEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRAL 262
           +E+TNKLEEDLR+SATLIRVLSRQLEKLG RFR TRKALKKPVEETAALAQKTSEATRAL
Sbjct: 249 MEKTNKLEEDLRSSATLIRVLSRQLEKLGIRFRVTRKALKKPVEETAALAQKTSEATRAL 308

Query: 263 AVRGDILENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQERSGEQSPFGRHDL 322
           AVRGDILE EL EIQKVLLAMQEQQQKQL+LILAIG SGK+WESRQE SG QS  GRHDL
Sbjct: 309 AVRGDILEKELAEIQKVLLAMQEQQQKQLDLILAIGNSGKMWESRQEHSGGQSHVGRHDL 368

Query: 323 IDERINQKEVLD 333
           IDE +N KEV D
Sbjct: 369 IDEHLNGKEVQD 377

[Close]

BLAST of CmoCh07G005540.1 vs. NCBI nr
Match: gi|703066113|ref|XP_010087627.1| (hypothetical protein L484_022154 [Morus notabilis])

HSP 1 Score: 280.8 bits (717), Expect = 3.3e-72
Identity = 177/303 (58.42%), Postives = 209/303 (68.98%), Query Frame = 1


Query: 30  LAFQYLSLSSSSPSPPPSSTLYFSAFLSRN--PCLSLRFAPCRFPSTLHFQILDHKLRSP 89
           ++F  L L ++SP   P  TLYF+A   +N    L LR A   F S  HF I + +L SP
Sbjct: 1   MSFASLDLLTNSP---PRFTLYFAANPPKNHHTLLPLRIASRHFASRSHFHISNRQLPSP 60

Query: 90  YNFGSINAHQFNPRVSISEGAGRRDGDDFDIDSLLSAAELFCLVTSLLASVGFALNFVKA 149
               S   H+F   V  SEG  RRDGD  D DS LS  E  C+ +S + S+GFA+N V +
Sbjct: 61  CCSNSPRTHRFRLGVFESEGPVRRDGD-LDFDSFLSIVETLCVFSSAVVSLGFAVNCVVS 120

Query: 150 SSK-SVFLAVFGDRILVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVLEANLVERTNK 209
           SSK +V  A  G+ IL   +L +VAG+ IGAWIRRRQW R    + +G LE NL+ER  K
Sbjct: 121 SSKKTVMAAAMGNGILSCGMLVMVAGLGIGAWIRRRQWRRFCSGSVRGGLEVNLLERVEK 180

Query: 210 LEEDLRNSATLIRVLSRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRALAVRGDI 269
           LEEDLRNSATLIRV+SRQLEKLG RFR TRKALK+P+ ETAALAQK SEATRALAV+ DI
Sbjct: 181 LEEDLRNSATLIRVISRQLEKLGIRFRVTRKALKEPLAETAALAQKNSEATRALAVQEDI 240

Query: 270 LENELGEIQKVLLAMQEQQQKQLELILAIGKSGKIWESRQERSGEQSPFGRHDLIDERIN 329
           LE ELGEIQKVLLAMQEQQQKQLELILAIGK+GK++E+R ERS EQ     HD   E + 
Sbjct: 241 LEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLFETRPERSQEQERIEIHDSTAESLK 299

[Close]

BLAST of CmoCh07G005540.1 vs. NCBI nr
Match: gi|645219279|ref|XP_008234961.1| (PREDICTED: uncharacterized protein LOC103333834 [Prunus mume])

HSP 1 Score: 259.2 bits (661), Expect = 1.0e-65
Identity = 162/288 (56.25%), Postives = 187/288 (64.93%), Query Frame = 1


Query: 45  PPSSTLYFSAFLSRNPCLSLRFAPCRFPSTLHFQILDHKLRSPYNFGSINAHQFNPRVSI 104
           PP  TLY +  L + P L          S  HF I +H L +P+N  S+++H    RV  
Sbjct: 13  PPRFTLYITTSLPKTPAL----LSLPITSRPHFPISNHSLPNPHNSTSLSSHHSRLRVYE 72

Query: 105 SEGAGRRD---GDDFDIDSLLSAAELFCLVTSLLASVGFALNFVKASSKSVFLAVFGDRI 164
           S+G  + +      F++D  LS AE  CL +S L SVGFALN    S K   L   G+ +
Sbjct: 73  SDGTLQSNDVVNGAFNLDYFLSVAEFLCLASSALVSVGFALNCAVLSLKKTALVAMGNNV 132

Query: 165 LVGAILFLVAGVAIGAWIRRRQWNRIYRETAKGVLEANLVERTNKLEEDLRNSATLIRVL 224
           L    + LV  V IGAWIR RQW RI RE+ KG LE NL ER  KLEEDLR+SAT+IRVL
Sbjct: 133 LASGAVALVMAVGIGAWIRMRQWRRICRESVKGGLEVNLFERIEKLEEDLRSSATIIRVL 192

Query: 225 SRQLEKLGNRFRDTRKALKKPVEETAALAQKTSEATRALAVRGDILENELGEIQKVLLAM 284
           SRQLEKLG RFR TRKALK+P+ ETAALAQK SEATRALAV+ D LE ELGEIQKVLLAM
Sbjct: 193 SRQLEKLGIRFRVTRKALKEPIAETAALAQKNSEATRALAVQEDNLEKELGEIQKVLLAM 252

Query: 285 QEQQQKQLELILAIGKSGKIWESRQERSGEQSPFGRHDLIDERINQKE 330
           QEQQQKQLELILAI  SGK+ ESRQ R  EQS     D  +E   QKE
Sbjct: 253 QEQQQKQLELILAIATSGKLRESRQVRDQEQSTTIIRDSSEEDSKQKE 296

The following BLAST results are available for this feature:

BLAST of CmoCh07G005540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh07G005540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK16_CUCSA	8.2e-123	79.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499810 PE=4 SV=1	[more]
W9QZ57_9ROSA	2.3e-72	58.42	Uncharacterized protein OS=Morus notabilis GN=L484_022154 PE=4 SV=1	[more]
M5VZD9_PRUPE	3.5e-65	55.56	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009241mg PE=4 SV=1	[more]
A0A067K3Y0_JATCU	3.5e-57	52.92	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18648 PE=4 SV=1	[more]
A0A059AKP1_EUCGR	1.3e-56	51.17	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00513 PE=4 SV=1	[more]

BLAST of CmoCh07G005540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65250.1	6.1e-45	42.50	unknown protein	[more]

BLAST of CmoCh07G005540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449451421\|ref\|XP_004143460.1\|	4.8e-124	80.45	PREDICTED: uncharacterized protein LOC101207421 [Cucumis sativus]	[more]
gi\|659080048\|ref\|XP_008440583.1\|	6.9e-123	79.43	PREDICTED: uncharacterized protein LOC103484959 [Cucumis melo]	[more]
gi\|700193533\|gb\|KGN48737.1\|	1.2e-122	79.81	hypothetical protein Csa_6G499810 [Cucumis sativus]	[more]
gi\|703066113\|ref\|XP_010087627.1\|	3.3e-72	58.42	hypothetical protein L484_022154 [Morus notabilis]	[more]
gi\|645219279\|ref\|XP_008234961.1\|	1.0e-65	56.25	PREDICTED: uncharacterized protein LOC103333834 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh07G005540	CmoCh07G005540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh07G005540.1	CmoCh07G005540.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G005540.1.CDS.5	CmoCh07G005540.1.CDS.5	CDS
CmoCh07G005540.1.CDS.4	CmoCh07G005540.1.CDS.4	CDS
CmoCh07G005540.1.CDS.3	CmoCh07G005540.1.CDS.3	CDS
CmoCh07G005540.1.CDS.2	CmoCh07G005540.1.CDS.2	CDS
CmoCh07G005540.1.CDS.1	CmoCh07G005540.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G005540.1.exon.5	CmoCh07G005540.1.exon.5	exon
CmoCh07G005540.1.exon.4	CmoCh07G005540.1.exon.4	exon
CmoCh07G005540.1.exon.3	CmoCh07G005540.1.exon.3	exon
CmoCh07G005540.1.exon.2	CmoCh07G005540.1.exon.2	exon
CmoCh07G005540.1.exon.1	CmoCh07G005540.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 267..287 scor
None	No IPR available	PANTHER	PTHR36408	FAMILY NOT NAMED	coord: 103..328 score: 1.1