CmoCh07G005320.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTCTTTTTCCCATTAAGCAAATTCAATGTTTTCCCGGTTCCCTCAAAGTTTGTAAAATTTTGGCATTCAACGTTCTCCAAATCTGCAAAACATCGTGGCCATCGCATTTGGGATCAATAATTTACCATCTCTTTTGCTTCTCTGCTTCGAGTAAATCGGATCACCGGCGTGAGTTTGATCAGTCACTCATTCTTTCGTATACAAAATGGCTACAATCTCTTCGTTCTTCTTGATTCTTTTCCCACATTTGGGTGTTTACTATATTGTTGTGCGTATTCTTTGTGTACTATCGATTTCAAACGTTTTTCATCTGCTTGTGGAGTGACACTATATTTCCCAATTGAAATCTGTTGGCTGTTCGCGAACTAGAATATTTCTCTCGTGCTTAAATCTAATATTTGGTTATTGGTATGTTCTGGGTTATCAGCATGATTTCTTCAGGATTTCTCGAGTTCAATGGAGCAGTGCAAGTTTATAATCATGCCTGTGATTCAAATCCTCATAATGTCTCTTTGATTTCTCTACCGGTTATCCGGAAGGGTTTTGATTCTGATGTACGGCTGTTTAGAAGAGGGATTTGTAGTATGAGAAATTTCAGGCTTTCAGATGTTTGTGCGACCCCGCAAGTTTCAATTATGAACCACATTACACCTGTTTCGGATTGGAATAGTGATGATTCTATGAGGCCATCAAGTAAGTCTGATTACCTATTAGGAATAATGGCTTCTAATCTTTTATTGGTTCCCAGGAGATTGAATTTCTTTGTAATGTCCATGAACTTTCCTCTTTAAAGTTGAAACAGCTCTGATATTAATTCGACATGGTGAGTCAATGTGGAATGAGAAGAATTTATTTACTGGCTCTGTTGATGTACCTTTAACAAGAAGAGGTGTAGAGGAAGCAATTGAAGCTGGTAAGAGGATCAGCAACCTACCGATCGACTACGTTTACACGTCTGCGTTAATTCGCTCACAAATGACAGCGGTGCTTGCTTTGATTCAACATCGCTGCAAAAAGGTGTATATCATGCATGGTGTTTTTTGTTCCTGCATCATAAAAAGTGGATAGCCTTTGATTAGCTTCTAGTCCTGAGTTTGATGAATTCAGAACTGCATACTAGTTGCTCAAGATGGTTGTAAGTTTGTAATATGAGGATGCATCTGCAAATTCCTTTCATTCCCATTAAGGAATTCTTATCATTGGATGAGAAGATTTTGTTGTTTAGAATACAGAGTTCAAGCTAATATTTAGAGGAAAATGGATGTTATTTTGATTGAAGTTTGATTGTTGTTTTTTAAACATTCCATAGCAGAAAATGGATGTTTCTAATTTAGACCATTTTATGCTTTCAGGTGCCCATCATTATCCATAATTGTAATGAACAGGCAGAGGCATGGAGCCAAATTTACAGTGATGAGGCTAGAAAGCAATCATTTCCGGTTATTAGAGCTTGGCAATTGAATGAAAGAATGTACTTTCTCTTTTCATGGGAATCTATATTTTCCTTCTATCTGAAGACTATACTAATTGTTTTGATGCACAAAACTATAATACAGGTATGGTGAGCTACAGGGACTGAATAAACAGGAGATTGCCAAAAGATATGGTGAAGAGCAAGTGCATGAATGGCGCCGGAGTTACGAAATTCCTCCGCCCGAGGGTGAGAGCTTGCAGATGTGCTCACAAAGAGCAGTTGGATATTTTAAAGAGCATGTAAGCACTCTTGGATTCTTGTTTTGATTATTTGAAACGGTAAGATTCTCACAGGGCAAGAAGGAATTGTAGATTGAACCACATCTGCAATCTGGGAAACATGTTATGGTTGCAGCCCATGCTAATACGCTAAGGTCTATTATCATGTACCTAGAAAAATTAACTTCTCGCCAGGTAGAGAGACCATATCCTACATGTTTTTCTTCAGTGTTCATGTTGCTACCTTCTAGTATAGCTTATTAATGAATGAATATTTGCTAGGAGACAGGTAATTGGGTTGGAAGTATCAACTGGGGTACCATTACTTTACATATACAAGGAGGGAACGTTTATGAAGCGAGGGAGTCCTGTCGGTTCTTCGGAAGCTGGCGTATATGCACTAACTAGGGCAAGAATATTCTACCTCTCCATCATCTTATGTTTATAATTACTGGTATCCTGATATTTGCTTGTAGAAATTCAAGAGTCATTTTCCTTGATTGCTTTGTTGCTCATCGATTGTGATGAAAATGGAGGAAAGAACATAATAGTTGCTGCTGTGGTCTACTGAGAGGAAAAATATCCAAAGAATAATTAGGGTCTTTGATAAACTGTTCTTTGATATTGGTTCTTGAGTGACCATAGACGTTTGGCGACGAGTGCATAGATTAGAACATAATTTGACCATTAATCTGCGATGACTTTTCCTCAAGGTTTTTAAAACGTGTTTGGTAGGGAGAGGTTTTCACACCCTTATCCCCTCTTCAACCGATGTGGGTTCTCACAATCCACTCCCCTTGGGGCCCAGCGTCCTCGCTGATACACCGCTTGGTGTCTAGCTCTGATACCATTTGTAATGACTCAAACCCATCGCTAGCAAATATTGTCGTCTTTGGGCTTTCCCTTTCAAGATTTCCCTCAAGGTTTTTAAAATGCGTTTGGTAGGAAAAGGTTTCTACACCCTTATCCCCTCTCCAACCCATATGGGATCTCAAAACAAGTGCTTATCTGAACTTAGGCCATCGTTTCTGTGCACAAACTCTGGAATGTTGCCACAAGCGAACACCGTATTATCCAAATGAGTTCTTTGCTAATCTAAAAGTTTGTGTTTAACCATCTTGATCTTAGATGTCAACTCCAAACAGTTAAAGCTTAAAAGGAATAAACAGAGGACTGCTACATGTTCTGTCTATCTTTCTCTACGCAATCACTTGATTGATTAGCATCTGCCCACTTCCTATATCTTATGCAGAATTTAGCACTTTACAGGCAAAAGTTGGACGAAATGTCATGCTGAATCCCTGAAATTCAGGTAAGAATATTTCGACTTGTTAGATTATTACCACTCAAGAGTATGATTGAAAACAAGGTTACTGCTTTTTTGATGTTGCAAATGAACTAGGAAACCGATCGACTTACCGGCTCGTGCTTCTTGTTGTTCTAAACCCAGATAGCTTATACTAATTACGGATTGTTTGTTGCTTGTATATGTTTCTATGGGATAGTGATCAATGTGTTCTTCAGTGTTATTGTTGAAGGTTATCTGCAGCGGGCATACCCACTTCCTGGAAAGACAAGGAGATGCATTCCACAAAAGCCATAGATACAAGTTTCCATCTTTTAGTATGGAAGATGATTTTAATTTTTCATTTATGTTTCATCCTAATATAATCTAAGTATTATTATCAACCAACACGAGTATAATTCAACCGTTA TGTTCTTTTTCCCATTAAGCAAATTCAATGTTTTCCCGGTTCCCTCAAAGTTTGTAAAATTTTGGCATTCAACGTTCTCCAAATCTGCAAAACATCGTGGCCATCGCATTTGGGATCAATAATTTACCATCTCTTTTGCTTCTCTGCTTCGAGTAAATCGGATCACCGGCCATGATTTCTTCAGGATTTCTCGAGTTCAATGGAGCAGTGCAAGTTTATAATCATGCCTGTGATTCAAATCCTCATAATGTCTCTTTGATTTCTCTACCGGTTATCCGGAAGGGTTTTGATTCTGATGTACGGCTGTTTAGAAGAGGGATTTGTAGTATGAGAAATTTCAGGCTTTCAGATGTTTGTGCGACCCCGCAAGTTTCAATTATGAACCACATTACACCTGTTTCGGATTGGAATAGTGATGATTCTATGAGGCCATCAATTGAAACAGCTCTGATATTAATTCGACATGGTGAGTCAATGTGGAATGAGAAGAATTTATTTACTGGCTCTGTTGATGTACCTTTAACAAGAAGAGGTGTAGAGGAAGCAATTGAAGCTGGTAAGAGGATCAGCAACCTACCGATCGACTACGTTTACACGTCTGCGTTAATTCGCTCACAAATGACAGCGGTGCTTGCTTTGATTCAACATCGCTGCAAAAAGGTGCCCATCATTATCCATAATTGTAATGAACAGGCAGAGGCATGGAGCCAAATTTACAGTGATGAGGCTAGAAAGCAATCATTTCCGGTTATTAGAGCTTGGCAATTGAATGAAAGAATGTATGGTGAGCTACAGGGACTGAATAAACAGGAGATTGCCAAAAGATATGGTGAAGAGCAAGTGCATGAATGGCGCCGGAGTTACGAAATTCCTCCGCCCGAGGGTGAGAGCTTGCAGATGTGCTCACAAAGAGCAGTTGGATATTTTAAAGAGCATATTGAACCACATCTGCAATCTGGGAAACATGTTATGGTTGCAGCCCATGCTAATACGCTAAGGTCTATTATCATGTACCTAGAAAAATTAACTTCTCGCCAGGTAATTGGGTTGGAAGTATCAACTGGGGTACCATTACTTTACATATACAAGGAGGGAACGTTTATGAAGCGAGGGAGTCCTGTCGGTTCTTCGGAAGCTGGCGTATATGCACTAACTAGGGCAAGAATATTCTACCTCTCCATCATCTTATGCAAAAGTTGGACGAAATGTCATGCTGAATCCCTGAAATTCAGTGTTATTGTTGAAGGTTATCTGCAGCGGGCATACCCACTTCCTGGAAAGACAAGGAGATGCATTCCACAAAAGCCATAGATACAAGTTTCCATCTTTTAGTATGGAAGATGATTTTAATTTTTCATTTATGTTTCATCCTAATATAATCTAAGTATTATTATCAACCAACACGAGTATAATTCAACCGTTA ATGATTTCTTCAGGATTTCTCGAGTTCAATGGAGCAGTGCAAGTTTATAATCATGCCTGTGATTCAAATCCTCATAATGTCTCTTTGATTTCTCTACCGGTTATCCGGAAGGGTTTTGATTCTGATGTACGGCTGTTTAGAAGAGGGATTTGTAGTATGAGAAATTTCAGGCTTTCAGATGTTTGTGCGACCCCGCAAGTTTCAATTATGAACCACATTACACCTGTTTCGGATTGGAATAGTGATGATTCTATGAGGCCATCAATTGAAACAGCTCTGATATTAATTCGACATGGTGAGTCAATGTGGAATGAGAAGAATTTATTTACTGGCTCTGTTGATGTACCTTTAACAAGAAGAGGTGTAGAGGAAGCAATTGAAGCTGGTAAGAGGATCAGCAACCTACCGATCGACTACGTTTACACGTCTGCGTTAATTCGCTCACAAATGACAGCGGTGCTTGCTTTGATTCAACATCGCTGCAAAAAGGTGCCCATCATTATCCATAATTGTAATGAACAGGCAGAGGCATGGAGCCAAATTTACAGTGATGAGGCTAGAAAGCAATCATTTCCGGTTATTAGAGCTTGGCAATTGAATGAAAGAATGTATGGTGAGCTACAGGGACTGAATAAACAGGAGATTGCCAAAAGATATGGTGAAGAGCAAGTGCATGAATGGCGCCGGAGTTACGAAATTCCTCCGCCCGAGGGTGAGAGCTTGCAGATGTGCTCACAAAGAGCAGTTGGATATTTTAAAGAGCATATTGAACCACATCTGCAATCTGGGAAACATGTTATGGTTGCAGCCCATGCTAATACGCTAAGGTCTATTATCATGTACCTAGAAAAATTAACTTCTCGCCAGGTAATTGGGTTGGAAGTATCAACTGGGGTACCATTACTTTACATATACAAGGAGGGAACGTTTATGAAGCGAGGGAGTCCTGTCGGTTCTTCGGAAGCTGGCGTATATGCACTAACTAGGGCAAGAATATTCTACCTCTCCATCATCTTATGCAAAAGTTGGACGAAATGTCATGCTGAATCCCTGAAATTCAGTGTTATTGTTGAAGGTTATCTGCAGCGGGCATACCCACTTCCTGGAAAGACAAGGAGATGCATTCCACAAAAGCCATAG
BLAST of CmoCh07G005320.1 vs. Swiss-Prot
Match: GPMA_PARUW (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Protochlamydia amoebophila (strain UWE25) GN=gpmA PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 3.8e-74 Identity = 128/221 (57.92%), Postives = 175/221 (79.19%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. Swiss-Prot
Match: GPMA_CHLFF (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia felis (strain Fe/C-56) GN=gpmA PE=3 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65 Identity = 125/226 (55.31%), Postives = 172/226 (76.11%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. Swiss-Prot
Match: GPMA_CHLMU (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia muridarum (strain MoPn / Nigg) GN=gpmA PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 5.5e-65 Identity = 120/228 (52.63%), Postives = 170/228 (74.56%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. Swiss-Prot
Match: GPMA_CHLCV (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydophila caviae (strain GPIC) GN=gpmA PE=3 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.1e-64 Identity = 123/226 (54.42%), Postives = 170/226 (75.22%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. Swiss-Prot
Match: GPMA_CHLTB (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) GN=gpmA PE=3 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.0e-63 Identity = 120/228 (52.63%), Postives = 166/228 (72.81%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. TrEMBL
Match: A0A0A0KLZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500580 PE=3 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 1.6e-151 Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. TrEMBL
Match: A0A067LHM7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24077 PE=3 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 4.9e-113 Identity = 208/326 (63.80%), Postives = 258/326 (79.14%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. TrEMBL
Match: E0CRH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05060 PE=3 SV=1) HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-111 Identity = 201/312 (64.42%), Postives = 252/312 (80.77%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. TrEMBL
Match: M5XCB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008103mg PE=3 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 1.0e-110 Identity = 206/336 (61.31%), Postives = 260/336 (77.38%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. TrEMBL
Match: A0A0D2USZ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G239400 PE=3 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 3.9e-110 Identity = 196/300 (65.33%), Postives = 248/300 (82.67%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. TAIR10
Match: AT1G22170.1 (AT1G22170.1 Phosphoglycerate mutase family protein) HSP 1 Score: 391.7 bits (1005), Expect = 5.0e-109 Identity = 187/263 (71.10%), Postives = 229/263 (87.07%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. TAIR10
Match: AT1G78050.1 (AT1G78050.1 phosphoglycerate/bisphosphoglycerate mutase) HSP 1 Score: 376.3 bits (965), Expect = 2.2e-104 Identity = 182/279 (65.23%), Postives = 232/279 (83.15%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. NCBI nr
Match: gi|659080119|ref|XP_008440622.1| (PREDICTED: phosphoglycerate mutase-like isoform X3 [Cucumis melo]) HSP 1 Score: 554.7 bits (1428), Expect = 1.3e-154 Identity = 267/334 (79.94%), Postives = 299/334 (89.52%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. NCBI nr
Match: gi|659080113|ref|XP_008440619.1| (PREDICTED: phosphoglycerate mutase-like isoform X1 [Cucumis melo]) HSP 1 Score: 548.1 bits (1411), Expect = 1.2e-152 Identity = 267/340 (78.53%), Postives = 299/340 (87.94%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. NCBI nr
Match: gi|449451455|ref|XP_004143477.1| (PREDICTED: phosphoglycerate mutase-like isoform X2 [Cucumis sativus]) HSP 1 Score: 543.9 bits (1400), Expect = 2.2e-151 Identity = 265/336 (78.87%), Postives = 299/336 (88.99%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. NCBI nr
Match: gi|778719210|ref|XP_011657979.1| (PREDICTED: phosphoglycerate mutase-like isoform X1 [Cucumis sativus]) HSP 1 Score: 537.3 bits (1383), Expect = 2.1e-149 Identity = 265/342 (77.49%), Postives = 299/342 (87.43%), Query Frame = 1
BLAST of CmoCh07G005320.1 vs. NCBI nr
Match: gi|659080117|ref|XP_008440621.1| (PREDICTED: phosphoglycerate mutase-like isoform X2 [Cucumis melo]) HSP 1 Score: 535.8 bits (1379), Expect = 6.1e-149 Identity = 263/340 (77.35%), Postives = 295/340 (86.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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