CmoCh07G002650.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G002650.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSphingosine kinase 1
LocationCmo_Chr07 : 1303717 .. 1309312 (-)
Sequence length822
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAATCCGGAGTTCCAGAGCCTGTCCTTAACCACCGTCTCCTCCTTGACGACGGAATCGTCACGCCAATGATTCTCACAGCCGACGGTTGGCTTCGGTGGTCGGAGAAAGGCCAACGATCTCTGGCCATTGAGAAAGAGGTAATGGGATTCTCCATGGATGGTCCAAAGATTAGGATCAAAGCTCTCGTTAAGGACCGTGGTGGATTGTGGTGCTTTGGAAGCAGCGGAGCTTTGGTGAGGAAGGAGTTTGTGTTTCAGCCCCGTGAATGCATCGATTTGCTTGGTAACACGATCGTCCAGAATTCTGTCTGGTTCTAATATTGACTTCGAGTAGTTTAGAAAATGCATTGAAAGGGGGAGAAGGATTTTGCTGTGATCTGATTTGTTTGTGCCTGCTGATTGCCATGATGATTTAATGTTTTCGTTTCTCTCCTAGATCTCTCAAGAGCCAAACGGAAACTCATTATCTAATACTTCGTTCTTTATGCTGTTCATTCGGCTTAATTTCGAGAACAAGAGAAATCTTCTTATTGCGATTCTTCTCATTGCAAATTCCCGTCGTCACATGTTAGTTACGGAATAGGATGAATAATGTCCGTCAGTTTTTCTGCTGATTAAGAGTTGGAGAACACTCCAGGATCATCGGCGTTTTTAGTGCTTCAAACTTGTTCTGCGTAGTGTTCCTTTCCATTGTTTTCTGGAATAATGGCAACTCTGTTTCAAACTTGGTCTTTTTTGTTTGCTTAGGTGCCTTTATCTTTCTTTTCCCCCTATTTCCACGTTCTTACAAGCATCACCTTGTTTAGTAGGTAATAAACGGATTGCTAGGGCGAGATGATTGGGTTGATGCAATAAAGATGCCTTTAGGAGTAGTGCCTGCAGGTATCGTATTCTTAGCTTGTTCGTCTTTTTTTAGTATTACAACAAGAATTTGAACTTACTACATCTGAAGGAGATGTTTAAATGATATGCAGACTGGAATTGTAATGACCATGGATCATATCTAGTGAAAGAACATTCGTGTCTGATGGCACTCGATTTCTCAGATTTCCCCCTTAACCAACGAAAAGACACTCCCATTCTATTACCATTTATTGGAGTTCCTTGTTTGGAACAACAAGAATTCTGATAGTATTTACTGGGGTTCATATATGCATTGGCACTGGAAATGGAATGGTGATATCACTTCTTCATTCAAATGGTGGCCTTTGTACCCCATGCGATGCTACTCTAGCCATCCTTCAAGGTTAGTATAGTTTTGTCAATCTCCAATGTTCATCTTATTTTCCCTTATGATCGAGCTATTTTGCAAACAAATTTTAATTTCTTGCAGGCCATAAATGTTCATTGGATGTTCCCACCGTTTTGCAAGGAGAGGCTAAACATTTTTCTGTGTTGATGCTTGCTTGGGGTATCTCTAACTTTATCTCTCTTTAGTGTTACTGCTGGGTAGTTGAGGTTTATTTGTCCTTTTGCCGATGCAACTATTTCTGCCGAGTCACCTGTTGTTTGCTTCTGCAGAGTTATCTAAGTTGAGTACTTAGGAATGCTACAAGTTACTACTATATTTTATATGCGTGTTCAGAGATGACATATAATGCCATTATTTTATATTAAAGATGACATATAACTGTCCTTGATTTTCAAACATTATTCATTTGGATTGGTTTGAAGTGCTTCTGTTACAGACCAAGGACGCAATACAAGCAAAGAGTCCCCTAACACACAGATCATACCAAAATTAAGGTTATCCGTGACCTGGTTTAGATGTTAAAAGTCCAAGTTCACAAAATCAAATCTTCTTCATTGGCATGCTTCTTGTTAGGAATCACGAATCTTTGCAATGGTATGATATTGTCCACCTTAAACACGAGCTCTCGTGGCTTTACTTTGAACTTTCTCGTAAGGCCTCATAATGGTCTAATCTTAATGGCTGTGCTTAAGCTTGCTGTCGAAACAACTCGCGTGCTGTCTGTGGCATAGGCTTCTTGATCCCATGGCCGCATGCTCTAAGTCTGTATTTAGTTCAAAGGCTTCTGTTTTTGTATCTTGAGAAGTATTCAAGGAGCCAAATTGGTAAGTGGAAGATTGTTTTCAGTCCTGTCTCTGCTGTACAATTGGTGTGAAACAAGTCGGTGAACCTGGTAGATTGTGTGTGTACAAAAATGATTTGAATCTTAATGTGTTGAAAGTAAAATCTTGATATGTTAGACAGGAAAAGAGAGGCCCGAAGAAAACACATGCTTTTGCAAGCTACCAACTACTTTTACTTCTAGGTGTACAAAAGGCACGCGGATAATTTATTCTCGTGCTAAATCCTTCCAACTTTGTACCAAAAAACATAATTTCTTGTGCATACTCTCCATTGTTTCCACCTCCGTACCTTTGATTCAAGTCGTTTTTACGAGCCATCTGATTAAAATTTTATTTGATGGCGTGTATGAGATATTTATTTATAGTGCTTTATTGGTAGTGAGTCCACTTTGACTAATTTATTAAATTTGAAGTAAATGAAAAGTTGCCAACCCAGCCAACGAATGCTAGCCACCTTCCAATAATTTTTTTCTATATACTATTTATCTTTACCTAAATCTTAAAGCCCAACAAATATATAATTAAAAAAAAAAGGTTGACTTCTCCCATTGAGAAGATAAATCATAATAATTGCAAAATGTTTATATGACATAATTATATTACTAGTTGGACTAATTGAAATATTCAAAGTGAATCGACCAACTAAATTATATTTAATGTCATTTTATAGGTTGGTTTAATTAAATATTAGACATAAAATTCAATAAACTTTTAATTTGTAACGATTGGGAAAGTGAAGATAATAATTTTATTTTATATTTTAAATAAGTTTTTTCATTTTTATTCCAACTCTGATGCTCATCTGTTGAAGTTTCTTTTTTATTTGGCTTTGTCTTCCAAGAACAAAAAAACAAAATAATTTGTTTTAGTTTTCATATTAATTAAAAAAAAAAAACATACACACCGAGACAAAGTTACATAAATATTTTAAAGTCGAAATAAAACAAAATCTATTTTTCATTTCGGACTCGTAATTTATTTTAGTTAGTAGTGAAAACTATTTAACTTTTAATATTCATTAATAAATAAATAAATAAATAAAACAAAAACAGAGTTTCATGAGAGAAAAATATTTCAAAATTTAAATAAAACAAAACCTGTTTTTTATTTATGACTGTTATAATGATACGACATAATTTGTTTTAGTTAGTAGCAAAAACGGTTTAACTTTTAATATTAACTTAAAAAATAAAATAAATAAAATAGAGACAAAGTTACATATGGGAAAATATTTCAAAATTTAATTAAAATAACACCCGTTTTTCATTTCTTACAGTTATAATGAGACCACAAAATTTGTTTTAGTTAGTAGTGAAAACTGTTTAACTTTTAATATTCATTGAAACAGATAAAATAAATAAGACAGAGGCAGAGTTAGAAAAATATTTCAAAATTTAAATAAAACAAAATATGTTTTTTATTTCTGACTGTTATAATGACACGATATAATTTGTTTTTCGTTAATAATAAAAACCGTTTAACTTTTAATATTAATTGAAAAAAAAAACAAATAAAACGGTCACAGAATTACATATGAGAAAATATTTTAAAGTTTGAATAAAATAAAACCTGTTTTTCATTTATAACCGTTATAGTGACGCCACATCATTTATTTTAATTATTAGGAAAACTGTTTCACTATTAATATTAACTGAAAAAAATAAAATAAATAAAAACAAAGGTCAAGTTATATGAGGAAAAATATTTCAAAATTTAAATAAAACAAAATCTACTTTTTCATTTTTTATTGTTATAATTACATGACATAATTTATATTAGTGAGCGGTAGAAAATGGTTTAACTTTTAATATTAATTAAAAAATAAAATAAATAAAACAACATGTAGAAAAATATTTCAAAGTTTTAATGAAAACATTTTTTTATTGTTACAATGACACGACATAATTTGTTTTAGTTAGTAGTAAAAATCGTTTAACTTTTAATATTTATTAAAAAAAATAAAACAAATATAGAGTTTCATAGAAAAAAAATACTTCAAAATTTGAATAAAACAAAACGACATAATTTGTTTTAATTAATAATGAAAACTGTTTAATTTTTAATATTAATTGAAAAAATAAAATAAATAAGAGAGAGAGAGAGATACGTGGAGAGAAAATATTTCAAAATTTGAATAAAACAAAGCCTAATTTTACATTTCTAACTATTAAAATGACACGACATTCTTCTCCAAATACCTTCAACTTTGTATGGGTGGGTCCACTTAATTTGTAATTTATCATTTGTTTTTTTTCTTCATAAAAGTATATAAGTATTACTCTAAGAAGTGCTCATTTTATTCGTGGGTACCCGCCCCTTGAACGTGAAGGAGATCATAAGTTTAAACGCACACGCACACATATATATTTCAGTTGAAAAATTAGAGAAAAAAAAAACATAATTAACTATTAAACAAACTCTTTTCAATGAGGAAAAATGTAATAATAATAGTTTATAAGTAACAATAAAATAAAATGAAATAAATGTCCCATTTAAGTAATATTGAAACATACCAATCAAAAGTAAAATAAAGATTTGTATACGTATGATATTAATATCAATTTATAAATTAAAACTGCATTTAATTCTAAAAAACCGTATTTAAAGTTTAAAAATATATAATTAAAAAACACAGCTTTATTACTATATTCAATTGTGGCTGCCACAAAAGGTTAAATTATTTAATATATCAATTTAAAAAGTTCGCTGACCTCTACCACAAGGGCACTTAAGTAAATAAAAAATAAAGATATTTTTTAAATTTCAAATTTTATAGATATTTTTTTAATATTATTTAAAGATTTTTATGCATATTTTTAAAGACATTTAAACTCTTAGAAGGTATTTATGAAATATTATTAAAATTATAATTCTTTCGTTTTTAAAAATTTAAGGATATTTTTTAGATAAATTATAAAGTTTAAGAGCGCTTTTGGTTAATTTAACCTATATATTACTATATATATCCTCATCGTCATTTTATTTTATCGTTGAAAATGATATAATATTTGTAAAATAATAAGAAGTACCAACCACTATTTGATTTAAAAAAAAAAATGCACACACTATTTGATTTGAGCTCAAAAAATAAAAAGAGATGATTAATTAAAGAAATATAAAATAAGTGAGCAATAAAAAAATAAAAAAGAAAAGAAAAGAGGGAAGGACGGCAAATAATAAGGACAGAACACGAGTCGACGTGATTTTGAAGCCTCGTGGATTGATTGTATAATACAGTGAAAATAAAGAGAGAAAATAATAATAATAATAATAATTTGGATGTTATTTTCTTATGTTAATTTTGGTTGGTTTAAATACGTCGTTGTCTTCTCTCCAAACCCTCTTCTGGTCTGATACACATCCTGGGTCGCTTCTCGTCCCATGATTATTGCAGATCAGGTCGCGGCAACCACCATTACTCCTCTTCTCGCTTTCTTCTTCTTCTTCCGTTTCTCTCCTTTCAGACCTCTCCTTCCTCTATCACTTCCCTTTCTAG

mRNA sequence

ATGGATCAATCCGGAGTTCCAGAGCCTGTCCTTAACCACCGTCTCCTCCTTGACGACGGAATCGTCACGCCAATGATTCTCACAGCCGACGGTTGGCTTCGGTGGTCGGAGAAAGGCCAACGATCTCTGGCCATTGAGAAAGAGGTAATGGGATTCTCCATGGATGGTCCAAAGATTAGGATCAAAGCTCTCGTTAAGGACCGTGGTGGATTGTGGTGCTTTGGAAGCAGCGGAGCTTTGGTGAGGAAGGAGTTTGTGTTTCAGCCCCGTGAATGCATCGATTTGCTTGGGCGAGATGATTGGGTTGATGCAATAAAGATGCCTTTAGGAGTAGTGCCTGCAGACTGGAATTTATTTACTGGGGTTCATATATGCATTGGCACTGGAAATGGAATGGTGATATCACTTCTTCATTCAAATGGTGGCCTTTGTACCCCATGCGATGCTACTCTAGCCATCCTTCAAGGCCATAAATGTTCATTGGATGTTCCCACCGTTTTGCAAGGAGAGGCTAAACATTTTTCTGTGTTGATGCTTGCTTGGGCTTGCTGTCGAAACAACTCGCGTGCTGTCTGTGGCATAGGCTTCTTGATCCCATGGCCGCATGCTCTAAGTCTGTATTTAGTTCAAAGGCTTCTGTTTTTGTATCTTGAGAAGTATTCAAGGAGCCAAATTGGTAAGTGGAAGATTGTTTTCAGTCCTGTCTCTGCTGTACAATTGATCAGGTCGCGGCAACCACCATTACTCCTCTTCTCGCTTTCTTCTTCTTCTTCCGTTTCTCTCCTTTCAGACCTCTCCTTCCTCTATCACTTCCCTTTCTAG

Coding sequence (CDS)

ATGGATCAATCCGGAGTTCCAGAGCCTGTCCTTAACCACCGTCTCCTCCTTGACGACGGAATCGTCACGCCAATGATTCTCACAGCCGACGGTTGGCTTCGGTGGTCGGAGAAAGGCCAACGATCTCTGGCCATTGAGAAAGAGGTAATGGGATTCTCCATGGATGGTCCAAAGATTAGGATCAAAGCTCTCGTTAAGGACCGTGGTGGATTGTGGTGCTTTGGAAGCAGCGGAGCTTTGGTGAGGAAGGAGTTTGTGTTTCAGCCCCGTGAATGCATCGATTTGCTTGGGCGAGATGATTGGGTTGATGCAATAAAGATGCCTTTAGGAGTAGTGCCTGCAGACTGGAATTTATTTACTGGGGTTCATATATGCATTGGCACTGGAAATGGAATGGTGATATCACTTCTTCATTCAAATGGTGGCCTTTGTACCCCATGCGATGCTACTCTAGCCATCCTTCAAGGCCATAAATGTTCATTGGATGTTCCCACCGTTTTGCAAGGAGAGGCTAAACATTTTTCTGTGTTGATGCTTGCTTGGGCTTGCTGTCGAAACAACTCGCGTGCTGTCTGTGGCATAGGCTTCTTGATCCCATGGCCGCATGCTCTAAGTCTGTATTTAGTTCAAAGGCTTCTGTTTTTGTATCTTGAGAAGTATTCAAGGAGCCAAATTGGTAAGTGGAAGATTGTTTTCAGTCCTGTCTCTGCTGTACAATTGATCAGGTCGCGGCAACCACCATTACTCCTCTTCTCGCTTTCTTCTTCTTCTTCCGTTTCTCTCCTTTCAGACCTCTCCTTCCTCTATCACTTCCCTTTCTAG
Homology
[Close]
BLAST of CmoCh07G002650.1 vs. Swiss-Prot
Match: SPHK2_ARATH (Sphingosine kinase 2 OS=Arabidopsis thaliana GN=SPHK2 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.4e-16
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 1 

Query: 70  GLWCFGSSGALVRKEFVFQPRECID-LLGRDDWVDAIKMPLGVVPADWNLFTGVHICIGT 129
           G+ C    G LV         E ++ LL R DW +A+K+P+G+VPA            GT
Sbjct: 173 GIVCVSGDGILV---------EVVNGLLERADWRNALKLPIGMVPA------------GT 232

Query: 130 GNGMVISLLHSNGGLCTPCDATLAILQGHKCSLDVPTVLQGEAKHFSVLMLAW 182
           GNGM+ SLL + G  C    AT++I++GHK S+DV T+ QG  K FSVLMLAW
Sbjct: 233 GNGMIKSLLDTVGLRCCANSATISIIRGHKRSVDVATIAQGNTKFFSVLMLAW 264

[Close]
BLAST of CmoCh07G002650.1 vs. Swiss-Prot
Match: SPHK1_ARATH (Sphingosine kinase 1 OS=Arabidopsis thaliana GN=SPHK1 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.2e-15
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 1 

Query: 6  VPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIRIKALV 65
          +P P +    +L +G+VTP+ LTA+G LR +E G+R   + KE++ F ++G K+R+K LV
Sbjct: 12 LPSPAIISDRVLVNGVVTPLTLTAEGELRSTESGRRKSTLAKEILSFVVEGNKVRVKTLV 71

Query: 66 KDRGGLWCFGSSGALVRKEFVFQP 90
          +  GG+ C GS+G   R +FVF+P
Sbjct: 72 EKGGGICCRGSAGDYARNDFVFEP 95

[Close]
BLAST of CmoCh07G002650.1 vs. TrEMBL
Match: A0A0A0KK35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517070 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-37
Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 1 

Query: 1   MDQSGVPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIR 60
           MDQSG  + +LNHR+LL DG VTPMILT DGWL+WSEK QR L+++KEV+GFSMDGPKIR
Sbjct: 1   MDQSGDSDFILNHRVLLPDGTVTPMILTTDGWLQWSEKSQRRLSVDKEVLGFSMDGPKIR 60

Query: 61  IKALVKDRGGLWCFGSSGALVRKEFVFQP-------------RECIDLLGRDDWVDAIKM 111
           IKALV+D GGL CFGSSGALVRKEFVFQP             RECIDL+GR   +  +  
Sbjct: 61  IKALVEDHGGLRCFGSSGALVRKEFVFQPLSEESRALWCLKLRECIDLIGRPKKLFVLVN 120

[Close]
BLAST of CmoCh07G002650.1 vs. TrEMBL
Match: M5WHA1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004781mg PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 62/123 (50.41%), Postives = 81/123 (65.85%), Query Frame = 1 

Query: 1   MDQSGVPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIR 60
           MD+    +P+L+ R+L++ G VTP+ L ADG LRWSE+GQRSL +EKEV+GF+ +GPKIR
Sbjct: 1   MDRPESAQPILSDRVLIN-GTVTPVTLFADGVLRWSERGQRSLIVEKEVLGFAAEGPKIR 60

Query: 61  IKALVKDRGGLWCFGSSGALVRKEFVFQP-------------RECIDLLGRDDWVDAIKM 111
           I+ALV+D  G+ C  S GA+VRKEFVF+P             RE ID LGR   +     
Sbjct: 61  IRALVEDGDGICCVASRGAVVRKEFVFKPLSEDSHRLWCQKLREHIDSLGRPKRLFVFVN 120

[Close]
BLAST of CmoCh07G002650.1 vs. TrEMBL
Match: F6H7U2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0181g00250 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.1e-21
Identity = 71/156 (45.51%), Postives = 86/156 (55.13%), Query Frame = 1 

Query: 70  GLWCFGSSGALVRKEFVFQPRECID-LLGRDDWVDAIKMPLGVVPADWNLFTGVHICIGT 129
           GL C    G LV         E ++ LL RDDW  AIKMP+GV+PA            GT
Sbjct: 171 GLICVSGDGILV---------EVVNGLLERDDWDSAIKMPIGVIPA------------GT 230

Query: 130 GNGMVISLLHSNGGLCTPCDATLAILQGHKCSLDVPTVLQGEAKHFSVLMLAWACCRN-- 189
           GNGM  SLL S G  C+P +A LAI++GHKCSLDV T+LQGE K FSVLMLAW    +  
Sbjct: 231 GNGMAKSLLDSVGDPCSPINAVLAIIRGHKCSLDVATILQGETKFFSVLMLAWGLVADID 290

Query: 190 -NSRAVCGIGFLIPWPHALSLYLVQRLLFLYLEKYS 222
             S     +G        L  Y +QR+  L+L KY+
Sbjct: 291 IESEKYRWMG-----SARLDFYALQRI--LHLRKYN 298

[Close]
BLAST of CmoCh07G002650.1 vs. TrEMBL
Match: A0A067JAU8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21363 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.5e-20
Identity = 60/113 (53.10%), Postives = 71/113 (62.83%), Query Frame = 1 

Query: 70  GLWCFGSSGALVRKEFVFQPRECID-LLGRDDWVDAIKMPLGVVPADWNLFTGVHICIGT 129
           G+ C    G LV         E ++ LL R+DW DAIK+PLG+VPA            GT
Sbjct: 172 GIVCVSGDGILV---------EVVNGLLAREDWSDAIKVPLGMVPA------------GT 231

Query: 130 GNGMVISLLHSNGGLCTPCDATLAILQGHKCSLDVPTVLQGEAKHFSVLMLAW 182
           GNGMV SLL S G  C P +A LAI++GHKCSLDV T+LQGE K FSVLML+W
Sbjct: 232 GNGMVKSLLDSVGEPCKPSNAILAIIRGHKCSLDVATILQGETKFFSVLMLSW 263

[Close]
BLAST of CmoCh07G002650.1 vs. TrEMBL
Match: W9R1S4_9ROSA (Sphingosine kinase 1 OS=Morus notabilis GN=L484_006390 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.6e-20
Identity = 59/128 (46.09%), Postives = 75/128 (58.59%), Query Frame = 1 

Query: 1   MDQSGVPEPVLNHRLLLDD-----GIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMD 60
           MDQ   PEP  + R +  D     G+ TP+ L+ADG +RWSE GQRSL +EKEV+GF+ D
Sbjct: 1   MDQ---PEPEQSRRPVFSDRVAVNGVYTPLTLSADGVIRWSEGGQRSLTVEKEVLGFATD 60

Query: 61  GPKIRIKALVKDRGGLWCFGSSGALVRKEFVF-------------QPRECIDLLGRDDWV 111
           G K+ I+ +V+  GG+ CFGS GALVRK FVF             + RE ID LGR   +
Sbjct: 61  GSKLEIRTVVEGGGGILCFGSRGALVRKNFVFLFSSEDSQKLLCLKLREFIDSLGRPKRL 120

[Close]
BLAST of CmoCh07G002650.1 vs. TAIR10
Match: AT4G21534.1 (AT4G21534.1 Diacylglycerol kinase family protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 1 

Query: 70  GLWCFGSSGALVRKEFVFQPRECID-LLGRDDWVDAIKMPLGVVPADWNLFTGVHICIGT 129
           G+ C    G LV         E ++ LL R DW +A+K+P+G+VPA            GT
Sbjct: 173 GIVCVSGDGILV---------EVVNGLLERADWRNALKLPIGMVPA------------GT 232

Query: 130 GNGMVISLLHSNGGLCTPCDATLAILQGHKCSLDVPTVLQGEAKHFSVLMLAW 182
           GNGM+ SLL + G  C    AT++I++GHK S+DV T+ QG  K FSVLMLAW
Sbjct: 233 GNGMIKSLLDTVGLRCCANSATISIIRGHKRSVDVATIAQGNTKFFSVLMLAW 264

[Close]
BLAST of CmoCh07G002650.1 vs. TAIR10
Match: AT4G21540.1 (AT4G21540.1 sphingosine kinase 1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 1 

Query: 6  VPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIRIKALV 65
          +P P +    +L +G+VTP+ LTA+G LR +E G+R   + KE++ F ++G K+R+K LV
Sbjct: 12 LPSPAIISDRVLVNGVVTPLTLTAEGELRSTESGRRKSTLAKEILSFVVEGNKVRVKTLV 71

Query: 66 KDRGGLWCFGSSGALVRKEFVFQP 90
          +  GG+ C GS+G   R +FVF+P
Sbjct: 72 EKGGGICCRGSAGDYARNDFVFEP 95

[Close]
BLAST of CmoCh07G002650.1 vs. NCBI nr
Match: gi|449434352|ref|XP_004134960.1| (PREDICTED: sphingosine kinase 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37
Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 1 

Query: 1   MDQSGVPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIR 60
           MDQSG  + +LNHR+LL DG VTPMILT DGWL+WSEK QR L+++KEV+GFSMDGPKIR
Sbjct: 1   MDQSGDSDFILNHRVLLPDGTVTPMILTTDGWLQWSEKSQRRLSVDKEVLGFSMDGPKIR 60

Query: 61  IKALVKDRGGLWCFGSSGALVRKEFVFQP-------------RECIDLLGRDDWVDAIKM 111
           IKALV+D GGL CFGSSGALVRKEFVFQP             RECIDL+GR   +  +  
Sbjct: 61  IKALVEDHGGLRCFGSSGALVRKEFVFQPLSEESRALWCLKLRECIDLIGRPKKLFVLVN 120

[Close]
BLAST of CmoCh07G002650.1 vs. NCBI nr
Match: gi|659078767|ref|XP_008439896.1| (PREDICTED: sphingosine kinase 1 isoform X1 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37
Identity = 81/123 (65.85%), Postives = 92/123 (74.80%), Query Frame = 1 

Query: 1   MDQSGVPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIR 60
           MDQS   + +LNHR+LL DG VTPMILT DGWL+WSEK QR L+I+KEV+GFSMDGPKIR
Sbjct: 1   MDQSEDSDSILNHRVLLPDGTVTPMILTTDGWLQWSEKSQRRLSIDKEVLGFSMDGPKIR 60

Query: 61  IKALVKDRGGLWCFGSSGALVRKEFVFQP-------------RECIDLLGRDDWVDAIKM 111
           IKALV+DRGGL CFG+SGALVRKEFVFQP             RECIDLLGR   +  +  
Sbjct: 61  IKALVEDRGGLRCFGNSGALVRKEFVFQPLSEESRALWCLKLRECIDLLGRPKKLFVLVN 120

[Close]
BLAST of CmoCh07G002650.1 vs. NCBI nr
Match: gi|645236865|ref|XP_008224941.1| (PREDICTED: sphingosine kinase 1-like isoform X1 [Prunus mume])

HSP 1 Score: 119.8 bits (299), Expect = 7.5e-24
Identity = 63/120 (52.50%), Postives = 80/120 (66.67%), Query Frame = 1 

Query: 4   SGVPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIRIKA 63
           S  P+PVL+ R+L++ G VTP+ L ADG LRWSE+GQRSL +EKEV+GF+ +GPKIRI+A
Sbjct: 6   SAQPQPVLSDRVLIN-GTVTPVTLFADGVLRWSERGQRSLIVEKEVLGFAAEGPKIRIRA 65

Query: 64  LVKDRGGLWCFGSSGALVRKEFVFQP-------------RECIDLLGRDDWVDAIKMPLG 111
           LV+D  G+ C  S GA+VRKEFVF+P             RE ID LGR   +     P G
Sbjct: 66  LVEDGDGICCVASRGAVVRKEFVFKPLSEDSHRLWCQKLREHIDSLGRPKRLFVFVNPFG 124

[Close]
BLAST of CmoCh07G002650.1 vs. NCBI nr
Match: gi|595868243|ref|XP_007211993.1| (hypothetical protein PRUPE_ppa004781mg [Prunus persica])

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 62/123 (50.41%), Postives = 81/123 (65.85%), Query Frame = 1 

Query: 1   MDQSGVPEPVLNHRLLLDDGIVTPMILTADGWLRWSEKGQRSLAIEKEVMGFSMDGPKIR 60
           MD+    +P+L+ R+L++ G VTP+ L ADG LRWSE+GQRSL +EKEV+GF+ +GPKIR
Sbjct: 1   MDRPESAQPILSDRVLIN-GTVTPVTLFADGVLRWSERGQRSLIVEKEVLGFAAEGPKIR 60

Query: 61  IKALVKDRGGLWCFGSSGALVRKEFVFQP-------------RECIDLLGRDDWVDAIKM 111
           I+ALV+D  G+ C  S GA+VRKEFVF+P             RE ID LGR   +     
Sbjct: 61  IRALVEDGDGICCVASRGAVVRKEFVFKPLSEDSHRLWCQKLREHIDSLGRPKRLFVFVN 120

[Close]
BLAST of CmoCh07G002650.1 vs. NCBI nr
Match: gi|302144199|emb|CBI23326.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 71/156 (45.51%), Postives = 86/156 (55.13%), Query Frame = 1 

Query: 70  GLWCFGSSGALVRKEFVFQPRECID-LLGRDDWVDAIKMPLGVVPADWNLFTGVHICIGT 129
           GL C    G LV         E ++ LL RDDW  AIKMP+GV+PA            GT
Sbjct: 188 GLICVSGDGILV---------EVVNGLLERDDWDSAIKMPIGVIPA------------GT 247

Query: 130 GNGMVISLLHSNGGLCTPCDATLAILQGHKCSLDVPTVLQGEAKHFSVLMLAWACCRN-- 189
           GNGM  SLL S G  C+P +A LAI++GHKCSLDV T+LQGE K FSVLMLAW    +  
Sbjct: 248 GNGMAKSLLDSVGDPCSPINAVLAIIRGHKCSLDVATILQGETKFFSVLMLAWGLVADID 307

Query: 190 -NSRAVCGIGFLIPWPHALSLYLVQRLLFLYLEKYS 222
             S     +G        L  Y +QR+  L+L KY+
Sbjct: 308 IESEKYRWMG-----SARLDFYALQRI--LHLRKYN 315

The following BLAST results are available for this feature:
BLAST of CmoCh07G002650.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SPHK2_ARATH3.4e-1644.25Sphingosine kinase 2 OS=Arabidopsis thaliana GN=SPHK2 PE=1 SV=1[more]
SPHK1_ARATH2.2e-1542.86Sphingosine kinase 1 OS=Arabidopsis thaliana GN=SPHK1 PE=1 SV=1[more]
BLAST of CmoCh07G002650.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK35_CUCSA1.9e-3765.04Uncharacterized protein OS=Cucumis sativus GN=Csa_6G517070 PE=4 SV=1[more]
M5WHA1_PRUPE1.2e-2350.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004781mg PE=4 SV=1[more]
F6H7U2_VITVI7.1e-2145.51Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0181g00250 PE=4 SV=... [more]
A0A067JAU8_JATCU3.5e-2053.10Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21363 PE=4 SV=1[more]
W9R1S4_9ROSA4.6e-2046.09Sphingosine kinase 1 OS=Morus notabilis GN=L484_006390 PE=4 SV=1[more]
BLAST of CmoCh07G002650.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G21534.11.9e-1744.25 Diacylglycerol kinase family protein[more]
AT4G21540.11.2e-1642.86 sphingosine kinase 1[more]
BLAST of CmoCh07G002650.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434352|ref|XP_004134960.1|2.7e-3765.04PREDICTED: sphingosine kinase 1 isoform X1 [Cucumis sativus][more]
gi|659078767|ref|XP_008439896.1|2.7e-3765.85PREDICTED: sphingosine kinase 1 isoform X1 [Cucumis melo][more]
gi|645236865|ref|XP_008224941.1|7.5e-2452.50PREDICTED: sphingosine kinase 1-like isoform X1 [Prunus mume][more]
gi|595868243|ref|XP_007211993.1|1.7e-2350.41hypothetical protein PRUPE_ppa004781mg [Prunus persica][more]
gi|302144199|emb|CBI23326.3|1.0e-2045.51unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh07G002650CmoCh07G002650gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh07G002650.1CmoCh07G002650.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh07G002650.1.CDS.7CmoCh07G002650.1.CDS.7CDS
CmoCh07G002650.1.CDS.6CmoCh07G002650.1.CDS.6CDS
CmoCh07G002650.1.CDS.5CmoCh07G002650.1.CDS.5CDS
CmoCh07G002650.1.CDS.4CmoCh07G002650.1.CDS.4CDS
CmoCh07G002650.1.CDS.3CmoCh07G002650.1.CDS.3CDS
CmoCh07G002650.1.CDS.2CmoCh07G002650.1.CDS.2CDS
CmoCh07G002650.1.CDS.1CmoCh07G002650.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh07G002650.1.exon.7CmoCh07G002650.1.exon.7exon
CmoCh07G002650.1.exon.6CmoCh07G002650.1.exon.6exon
CmoCh07G002650.1.exon.5CmoCh07G002650.1.exon.5exon
CmoCh07G002650.1.exon.4CmoCh07G002650.1.exon.4exon
CmoCh07G002650.1.exon.3CmoCh07G002650.1.exon.3exon
CmoCh07G002650.1.exon.2CmoCh07G002650.1.exon.2exon
CmoCh07G002650.1.exon.1CmoCh07G002650.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12358SPHINGOSINE KINASEcoord: 95..181
score: 2.0
NoneNo IPR availablePANTHERPTHR12358:SF42SUBFAMILY NOT NAMEDcoord: 95..181
score: 2.0