CmoCh06G010070.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh06G010070.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description40S ribosomal protein S6
LocationCmo_Chr06 : 7921835 .. 7924810 (+)
Sequence length1218
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTGAAGGCGTAGCCGGCTCGCTCTTTGTTCGTCTCCACTCTGCGGCCGCCATTGCTATAATCGAAGCTCTTGAACATGAAGGTTCGACCTCGTAGATTTCTTTCTTTCTGACTATTTCTTGAGTTTTACTGCTATGCTAATTTTGAGTTTTCGTGTTGATAGTTTAATATTGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTGTTAGCTTCCGAATTCCCTTATTCTTCAATCTGTTGTCTTAATCATGAATGTGCATTCTATGTGGATTAATTAATCTGTTCATCTTCAGTCGATTGTTCATATCATAAACATTACATAATTACATGGAGTTGGTCTAATGGAACGTTATCTTTTGGTTTTGACTGAGTTTTACCTAAGCGTGGCTTCATATCTTAGATCTTTGATTTCAATAGCAAGACTTTCTGGAACTAGGGGATTTGAGATGTATAATGAACAAACTGGCTCTCTTCTGATGAGTAGAGTAGTGTTAGCATCGTTTGTTCGATATGTTTGCAGTTATAATTTTTGAGTTAACGTTCAGTCTTATTACGGTGGATTTCAAATAGCTTATATATGACCTCGCTAGAAATCTATCTGCAGTATTTGCATTGCTTGTTGTGTTTTTCTTTCACTTATTTTTTTCTTAGTGAAGCAGCAATTTCTCCGAGAAACAATATTTAATGAGTTTTAAACGAGCAAAAAGAAAGATTCTAGCTATTTCCTTTTTGTTTGTATGTATGTATGTATGTTTGTCATTATTTTACTAAAGTTTAAATTTCTCTATGTATTAAAATTATCCCTTGTCTTTGTTCAGCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGTATGCATGCTCTTCAGTTACAATAAATGAAATGTTAGTTCCTAGTTGCTGTCTCTGAGTTGACTATGGATGATTTTTCTCTTATCAGGAATTCAAGGGTTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGTGTTTTGACTCCTGGCCGTGTCCGTCTTTTACTACACAGAGGTTTGTGGAACTGTTTAGACTAGTGAATGTTTAACCATTTAATCATACTTTTGGCCTTCATTATTTTTTTTCAATAATTTATAGCAATATCACGAGTAATGGAAACATTTGTTTTAACTTTTTTGGACAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGTGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTTCAATCTGTCAAAGGAGGATGATGTCCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGTATGGCTTACGAATGCTTTTTGTGGTTTTTTTTTATACGAAACAATTTTATTGATGTATAAAATTTACAAAAAGGATTGGGAGTCAGTGGATCAAAAAAAGATTCCTAGTTGGTTAAAAGGGATGCATAAGAATACGAAGCAAAATGATCTAACAATTGACTCCGAAGATATAGAATAACATTTGAGCAAGTAAAAGATATAGCATAATGTATGAGCAATTAAAAAAACTTATCAAAGGCTTGTTCATTGTCCACGAACAATCCACGGTTATGTGCATCCATGGCGTAGCCTTATCCTTTGCTGTTGTGGTTTCTAAACATGTCATATACTAACGAAGTAAGTTGGTGGTTATGTGTGTGATTTTCCGGCAGTGCTTGATAAATGGTGCAAGTACATGTCACGATCTGATATTTCTTTCATAAATTGGATAGTTCAATGAATGTATTCGTATGATAATCTATTCTTTGAATAGTCCCAACGTTTCTCGATGAACCTTGCATTACATTGTTGTTCAATGTTGCTCAATGTTGCTCCTGTTTTCATGTAGATGGATTGTGCTTATTAAAGCTGGAGACAAGGGAGTTGTAGGGGTTAATGATCATGTTGGCCATACTTAGGATTTAATATCCAACAAGTTACTTTGGCAACCAAAAGTAGTAGGCTTTAGGCGGTTGTTCCGTAAGAATAGTCGTCATGTCTGCAACTTGGTGTTGGATGCTCATGAATACAAGAAAAAATAGTAGTGTTGTATTAGTTCCCCAGTCTCATTTTGGCCATTTATAGTAATTGTTTTTTCAGCTGCGTTTATTATGGAATCAATCTGATGATTTATTTGATTGGCAGGCAAAAAGGTGAGCAAAGCCCCGAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGCAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCATCCATTGCTGCTTAGTATGTTCACATTATTTATGTCAGTGTTCTGTTCTCTTTATATTTGCCATCTTGTTTTGCTTTTAGAAGAATGAACTTTTTGCGGCTGCATATAATATGAGATCTGGAATGTTTTGGTATTCTTTCGTGTCTGTTAGGGCCTTTGTGGTATTTTCTTCCCTTAATTGTACGCTTATTCTTTTTCTCATTATTAATACTCCCTAGAATCTCTCGCACTAAGACAGACTAAAACCTAAACAAAATTTGAAATTCTAGCTTGATGGTTGGTTCTTGGGCTAGTTTAGTGTAACACCCATGCCTAGGATTTAGGATTTGAAATTTGGATTTGGCACCTGATGGTCCCGTCTTTTCTATCTTCTGTGACATAAGGTTTAGGGTTTACTTCCTTTCAC

mRNA sequence

TGTTGAAGGCGTAGCCGGCTCGCTCTTTGTTCGTCTCCACTCTGCGGCCGCCATTGCTATAATCGAAGCTCTTGAACATGAAGTTTAATATTGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGAATTCAAGGGTTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGTGTTTTGACTCCTGGCCGTGTCCGTCTTTTACTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGTGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTTCAATCTGTCAAAGGAGGATGATGTCCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTGAGCAAAGCCCCGAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGCAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCATCCATTGCTGCTTAGTATGTTCACATTATTTATGTCAGTGTTCTGTTCTCTTTATATTTGCCATCTTGTTTTGCTTTTAGAAGAATGAACTTTTTGCGGCTGCATATAATATGAGATCTGGAATGTTTTGGTATTCTTTCGTGTCTGTTAGGGCCTTTGTGGTATTTTCTTCCCTTAATTGTACGCTTATTCTTTTTCTCATTATTAATACTCCCTAGAATCTCTCGCACTAAGACAGACTAAAACCTAAACAAAATTTGAAATTCTAGCTTGATGGTTGGTTCTTGGGCTAGTTTAGTGTAACACCCATGCCTAGGATTTAGGATTTGAAATTTGGATTTGGCACCTGATGGTCCCGTCTTTTCTATCTTCTGTGACATAAGGTTTAGGGTTTACTTCCTTTCAC

Coding sequence (CDS)

ATGAAGTTTAATATTGCGAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGAATTCAAGGGTTATGTTTTCAAGATTATGGGAGGTTGTGACAAGCAGGGATTCCCAATGAAACAGGGTGTTTTGACTCCTGGCCGTGTCCGTCTTTTACTACACAGAGGTACCCCTTGTTTCCGTGGTTATGGTAGGCGTAATGGAGAGCGCAGGAGGAAGTCTGTGCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGTGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCATCCAAGATCCGCAAACTTTTCAATCTGTCAAAGGAGGATGATGTCCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTGAGCAAAGCCCCGAAGATTCAGAGGTTGGTTACCCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGGGAACGTCGCAGCGAGAGTTTGGCCAAGAAGAGGTCCAGGCTCTCTGCTGCTTCAAAGCCATCCATTGCTGCTTAG
BLAST of CmoCh06G010070.1 vs. Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-123
Identity = 229/243 (94.24%), Postives = 236/243 (97.12%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT K GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIAEKKKR+AKAKSEAAEYQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AAS 244
           AA+
Sbjct: 241 AAA 243

BLAST of CmoCh06G010070.1 vs. Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3)

HSP 1 Score: 435.3 bits (1118), Expect = 4.6e-121
Identity = 225/249 (90.36%), Postives = 237/249 (95.18%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

BLAST of CmoCh06G010070.1 vs. Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2)

HSP 1 Score: 434.1 bits (1115), Expect = 1.0e-120
Identity = 225/250 (90.00%), Postives = 238/250 (95.20%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

BLAST of CmoCh06G010070.1 vs. Swiss-Prot
Match: RS6_TOBAC (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2)

HSP 1 Score: 318.5 bits (815), Expect = 6.3e-86
Identity = 178/204 (87.25%), Postives = 185/204 (90.69%), Query Frame = 1

Query: 46  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 106 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRS 165
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 166 FTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQR 225
           FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKEQR
Sbjct: 121 FTTK--WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 180

Query: 226 ERRSESLAKKRSRLSAASKPSIAA 250
           E+RSESLAKKRSRLSAASKPSIAA
Sbjct: 181 EKRSESLAKKRSRLSAASKPSIAA 199

BLAST of CmoCh06G010070.1 vs. Swiss-Prot
Match: RS6_MOUSE (40S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.1e-77
Identity = 159/241 (65.98%), Postives = 190/241 (78.84%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVRGCIV  +LSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
            D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+    +  K  +KAPKI
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTP  LQ KR RIA KK+R  K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 181 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 236

Query: 241 A 242
           +
Sbjct: 241 S 236

BLAST of CmoCh06G010070.1 vs. TrEMBL
Match: A0A0A0L5R5_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.0e-130
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. TrEMBL
Match: A0A0A0LL90_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 6.5e-130
Identity = 246/249 (98.80%), Postives = 249/249 (100.00%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. TrEMBL
Match: A0A0D2T2W0_GOSRA (40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_008G090300 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-128
Identity = 242/249 (97.19%), Postives = 248/249 (99.60%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR+AKAK+EAAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKAEAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. TrEMBL
Match: A0A0D2QN24_GOSRA (40S ribosomal protein S6 OS=Gossypium raimondii GN=B456_003G041100 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-128
Identity = 242/249 (97.19%), Postives = 248/249 (99.60%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR+AKAK++AAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. TrEMBL
Match: A0A0B0MIQ0_GOSAR (40S ribosomal protein S6 OS=Gossypium arboreum GN=F383_17949 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-128
Identity = 242/249 (97.19%), Postives = 248/249 (99.60%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR+AKAK++AAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKADAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. TAIR10
Match: AT5G10360.1 (AT5G10360.1 Ribosomal protein S6e)

HSP 1 Score: 435.3 bits (1118), Expect = 2.6e-122
Identity = 225/249 (90.36%), Postives = 237/249 (95.18%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

BLAST of CmoCh06G010070.1 vs. TAIR10
Match: AT4G31700.1 (AT4G31700.1 ribosomal protein S6)

HSP 1 Score: 434.1 bits (1115), Expect = 5.8e-122
Identity = 225/250 (90.00%), Postives = 238/250 (95.20%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL- 240
           QRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL 
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 SAASKPSIAA 250
           SAA+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

BLAST of CmoCh06G010070.1 vs. NCBI nr
Match: gi|449431994|ref|XP_004133785.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus])

HSP 1 Score: 474.2 bits (1219), Expect = 1.4e-130
Identity = 248/249 (99.60%), Postives = 249/249 (100.00%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. NCBI nr
Match: gi|659088196|ref|XP_008444852.1| (PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 472.6 bits (1215), Expect = 4.2e-130
Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEK KRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKXKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPS+AA
Sbjct: 241 AASKPSVAA 249

BLAST of CmoCh06G010070.1 vs. NCBI nr
Match: gi|449469843|ref|XP_004152628.1| (PREDICTED: 40S ribosomal protein S6 [Cucumis sativus])

HSP 1 Score: 471.5 bits (1212), Expect = 9.3e-130
Identity = 246/249 (98.80%), Postives = 249/249 (100.00%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLL+SRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. NCBI nr
Match: gi|659074845|ref|XP_008437828.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 469.5 bits (1207), Expect = 3.5e-129
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT KSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTIKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

BLAST of CmoCh06G010070.1 vs. NCBI nr
Match: gi|823206980|ref|XP_012437220.1| (PREDICTED: 40S ribosomal protein S6-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 467.2 bits (1201), Expect = 1.8e-128
Identity = 242/249 (97.19%), Postives = 248/249 (99.60%), Query Frame = 1

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKNGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKR+AKAK+EAAEYQKLLA RLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRVAKAKAEAAEYQKLLAQRLKEQRERRSESLAKKRSRLS 240

Query: 241 AASKPSIAA 250
           AASKPSIAA
Sbjct: 241 AASKPSIAA 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RS6_ASPOF1.3e-12394.2440S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1[more]
RS62_ARATH4.6e-12190.3640S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3[more]
RS61_ARATH1.0e-12090.0040S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2[more]
RS6_TOBAC6.3e-8687.2540S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum GN=RPS6 PE=2 SV=2[more]
RS6_MOUSE4.1e-7765.9840S ribosomal protein S6 OS=Mus musculus GN=Rps6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L5R5_CUCSA1.0e-13099.6040S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1[more]
A0A0A0LL90_CUCSA6.5e-13098.8040S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1[more]
A0A0D2T2W0_GOSRA1.2e-12897.1940S ribosomal protein S6 OS=Gossypium raimondii GN=B456_008G090300 PE=3 SV=1[more]
A0A0D2QN24_GOSRA1.2e-12897.1940S ribosomal protein S6 OS=Gossypium raimondii GN=B456_003G041100 PE=3 SV=1[more]
A0A0B0MIQ0_GOSAR1.2e-12897.1940S ribosomal protein S6 OS=Gossypium arboreum GN=F383_17949 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G10360.12.6e-12290.36 Ribosomal protein S6e[more]
AT4G31700.15.8e-12290.00 ribosomal protein S6[more]
Match NameE-valueIdentityDescription
gi|449431994|ref|XP_004133785.1|1.4e-13099.60PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus][more]
gi|659088196|ref|XP_008444852.1|4.2e-13099.20PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo][more]
gi|449469843|ref|XP_004152628.1|9.3e-13098.80PREDICTED: 40S ribosomal protein S6 [Cucumis sativus][more]
gi|659074845|ref|XP_008437828.1|3.5e-12998.80PREDICTED: 40S ribosomal protein S6-like [Cucumis melo][more]
gi|823206980|ref|XP_012437220.1|1.8e-12897.19PREDICTED: 40S ribosomal protein S6-like isoform X1 [Gossypium raimondii][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001377Ribosomal_S6e
IPR014401Ribosomal_S6_euk
IPR018282Ribosomal_S6e_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh06G010070CmoCh06G010070gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh06G010070.1CmoCh06G010070.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh06G010070.1.exon.6CmoCh06G010070.1.exon.6exon
CmoCh06G010070.1.exon.5CmoCh06G010070.1.exon.5exon
CmoCh06G010070.1.exon.4CmoCh06G010070.1.exon.4exon
CmoCh06G010070.1.exon.3CmoCh06G010070.1.exon.3exon
CmoCh06G010070.1.exon.2CmoCh06G010070.1.exon.2exon
CmoCh06G010070.1.exon.1CmoCh06G010070.1.exon.1exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh06G010070.1.five_prime_UTR.1CmoCh06G010070.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh06G010070.1.CDS.1CmoCh06G010070.1.CDS.1CDS
CmoCh06G010070.1.CDS.2CmoCh06G010070.1.CDS.2CDS
CmoCh06G010070.1.CDS.3CmoCh06G010070.1.CDS.3CDS
CmoCh06G010070.1.CDS.4CmoCh06G010070.1.CDS.4CDS
CmoCh06G010070.1.CDS.5CmoCh06G010070.1.CDS.5CDS
CmoCh06G010070.1.CDS.6CmoCh06G010070.1.CDS.6CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh06G010070.1.three_prime_UTR.1CmoCh06G010070.1.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001377Ribosomal protein S6ePANTHERPTHR1150240S RIBOSOMAL PROTEIN S6coord: 2..243
score: 1.7E
IPR001377Ribosomal protein S6ePFAMPF01092Ribosomal_S6ecoord: 1..128
score: 3.9
IPR001377Ribosomal protein S6eSMARTSM01405Ribosomal_S6e_2coord: 1..128
score: 2.0
IPR014401Ribosomal protein S6, eukaryoticPIRPIRSF002129RPS6ecoord: 1..249
score: 3.9E
IPR018282Ribosomal protein S6e, conserved sitePROSITEPS00578RIBOSOMAL_S6Ecoord: 52..63
scor
NoneNo IPR availableunknownCoilCoilcoord: 189..216
scor
NoneNo IPR availablePANTHERPTHR11502:SF10SUBFAMILY NOT NAMEDcoord: 2..243
score: 1.7E