CmoCh05G011030.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G011030.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pre-mRNA-splicing factor 38A
Location	Cmo_Chr05 : 8792161 .. 8796044 (+)
Sequence length	1647

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTATCCATTTTTTCCGCTCGTAATTCGGATGACATATTTCGCCATCCTCTCCCGTCCGGCGGCAGAATTAGGGTTTCGATTATTCTCCTCTGTCGATTAACGTGCACTGATACCGGTACGGATTTTGCTGTTCTGGTTGTAATGGCAAATCGTACGGACCCAGCTGCGAAAAGCATAAGGGGGACGAATCCGCAGAACCTGGTGGAGAAGATTCTTCGCTCCAAGATCTATCAGAACAATTACTGGAAGGAGCAATGTTTTGGTTTGACGGCGGAGACATTGGTCGACAAAGCCATGGAGCTCGACCATCTCGGTGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTCGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATTAAGAACGAAGACTACAAGTAACTGTCATTGTCATTATAGTTTTCAATGAATATAACTTTGCATTTTTGTTACCTAGAAGCGTTTAGGAGTAGGGTTAATTAGAGGGAATGTTTCAATTGTTTGTTTTATGGAGTTTAAAGAAACCATTATTTTGGGAACTTACTGTGAAAATTAAATACTAGTAGGTCTGAGTTTTTGGAGTTGATCAGTGAATTGGAAATTAAGATTAGGATTGTGAATAAGTTTAGAACTTCTGCATGAACCCTATATTTGTTTATTGTGATTTGATAAGCATTGGAAATTCAGATTAGGCTTGTGGTTGAGCTAATTGAAGTACATTGGAAATGCTTTCTGTACCTCATGGTGTCCTGTAGTTCTTAAAGCTGTTGCTCACTCGCCTTAGTTTGCAATGATTGATTTTATACTGTATAGTCTTGAAAATGCGTTGTCTGCTTGGATTTAAAATTTTCTTCTGTCAATTAATAACTATGTTGTGTTAGTGTAAACTTTCTCTTGTAATTTCCTGTGGATGTTATGTTTTTTTTTTTCTAGTCTCTTTCAAGCATTATTTTGAATTTTTTTTTTTTTTTTTTGGGACATAGATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGACTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTCTGTACAACGATTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTAAGATTCTGGGGCCTCTTTTTGAATTTTATCTAATTAGTTATTGTGAAAACGACTTGATTTTACTTTCTTGTCACGTTAATGTATTTCTAATTATGATCTCCTCTGTAAAAAAAGTCATGAACTTGTCTTATTTTTATCAGGTTTTTCTTTAACGCACGTGGATGAAGTCATTGATGAACTTCTTACAAAAGATTATTCATGTGACATTGCTCTGCCACGTGTCAAAAAGAGGTATCGTACTGATTACTCATGTGACTATTTCCGAGTCAGTTTATTTTTCAAGTGGAAGTTGATAATGTCTTACTAAAATCAGGGCCTCAATAGAAATATGCATTATTCATTCTTTGACAAACAGAAGTACATGGGTCACAAATTCTAAATGTTGCTGTTCTGTTTCTCTCTCTCTCTCTCTTATGTGTCTCTAGTGTTCAGTTTTGAATGCGATGCTTCTTCTTGAAGTAACCTAAGTAAGATACACTTTGTAATGGCAGATGGACCCTTGAATCTACTGGTTCACTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGATGTTGAGCCAATCAATGATTCTTTGGAAGATGATATTCATGAAAAGGTACAAACGCATTCTCTGTTTATATTTGTAAAAACATCTAATTTTCATTTTCTCGTCCTTACTAACCCTTTTGAGATCTTGCATCTGCAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGTCCGATCCCCCGTCTGTTTTTTGGTTTCTTCTCCTTCCCTGTTCTCTCATTTTTTATGTTTGCAACTGTGATGCTCTTTCTGAATTTGTGAATATTTCCTCCTGTGGAGGGTTCCATTGATTGATATCTCCAGTCTATTAGCTGCCTTCATTTCGTGAATCACATAAATTTTTCGTTGAATGGGAAGTATAAGGTCCAAGGCCAAATTCAAAAATTTTGAGCTCAATTTGTCTTTTGCTCGAGTCTTTTGTTGCCAATGCTATTCTCTTAGTAGAGTTGGTGCTGGCGAAAGTTGAAAAATTAGATCAAACAAAAATTAGGAGATGAATAGGAGAATGGATGTTGTGGCTCAGCATGGGAGTTATCTACCTGTGTCTGGAAATCCATGCTATTGCCTATCTTAGGACTGGATTGGGTTTATTAGTTGCTTCTAAGCTCGTGCCCTTTCGACCACCGCACGTAGATAAAGCTGATTGCTAAGTTGGTTTTGGTTTTGGTTTTTGACCATGCGATTTCTTTGAGTGCTAATTTAACTAAAACGGATCCTTACTTGATCTGGTTCTTTTTAAAATTACGGAGCTGGAAGCAGTCTGAATCTGTAATTCTTGGATTGTTATCCATACTGCATTAACATTCATATGTTTTCTGTCACAACCATGGCATTTCAAGCCGTTGGTTGCTCGCTGCTTCCTACAGTGAATTCGCAAGGTCCTGCCAGGTTTCTCTGTACTGACAGTGTGCAGCTGAGAAGTATGATGGATCGTACATATATTTTTCCTAGTGATTTTTTTTCTCAACTTTATTTTTGTATTGCCTTCAATGATATCTTGGTGACCATACAGGCTACAGCTGAGAACTACTCATATGCTTTTCCTTTTTCATTTTCATCTATTATTTTGATTATTTTTCGGGCAACATCGAGTTTGTATTTGGTGTTCTACCCGAATGTTAAACCTTTCTGTATCTTATGCTTTTCCTGTGAAATTACCTGTTCATGCATCCAGGATAGGATATTTTATTCTCCATATTTTGATCCTAAAATCCATGTTCATAATGCATTGCTTACTTGCATTTATGAGCTGTCTTACTACATCGTTCCATTGAGTGGGAAGAATTTGATCTTTTGATACACCACATTGTTCCTTTGTTTTATCACAGGGACCGAGATTATGAAAGAGACCGGGATAATGATAGAGACTATGATAGAGATCGGGGTCGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGAGATCGGGATCGGGATAGGGACAGGGATAGAGACAGAGATAGGGATAGGGATCGCTATCACCTTAGGGATGAGAAGGAATATGGCAGAGATCGAGATAGGGAAAGAGAAGGCAGGGAGAGGGAGAGGGAGAGGGAGAGGCGAGACAGAGATCGTGGTCGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGAGAGGATGGGGAGTACCGGAAGAGACACACCCGTAGCAGCATTAGTCCTAGAAGAAGGAACGGGGCAGAGGATAGAGAGGAGCCGAAGAGGAAGAAGGAAAAGAAAGAGAAGAAGGGAGACGGGGCAGGCGAGGAAGACCCCGAAATCGCAGAATGGAACAGAATTCGTGCTTCTCTTGGAATGGCACCTCTGAAGTAGATGTTTGTTGTTCTTCTTCTTCAGTTTGAATGAAGTGCGAGTGAATCATGTTGCATAACTGAAGGTTAGAGGTTGTTGTTATCCATATGAGGAGAGGCTTAAGGTTCTCTGTTTTGTGTATAATATTTGTTTAGTGCTATTACTGTGTTTGTCGAATGATAATATAAATTACATTTGGAAATAGAATAATGTTGGAAGGGTTTGGGTATTTATTTGTTTAATCGAGTGTAAGTGGTTGTGTTAGCCAGTGAGTCGTCCACCACCAAAGTTGGTATTGTTAATTACAAAGAATCCATATGTGCT

mRNA sequence

CAATTATCCATTTTTTCCGCTCGTAATTCGGATGACATATTTCGCCATCCTCTCCCGTCCGGCGGCAGAATTAGGGTTTCGATTATTCTCCTCTGTCGATTAACGTGCACTGATACCGGTACGGATTTTGCTGTTCTGGTTGTAATGGCAAATCGTACGGACCCAGCTGCGAAAAGCATAAGGGGGACGAATCCGCAGAACCTGGTGGAGAAGATTCTTCGCTCCAAGATCTATCAGAACAATTACTGGAAGGAGCAATGTTTTGGTTTGACGGCGGAGACATTGGTCGACAAAGCCATGGAGCTCGACCATCTCGGTGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTCGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATTAAGAACGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGACTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTCTGTACAACGATTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTAACGCACGTGGATGAAGTCATTGATGAACTTCTTACAAAAGATTATTCATGTGACATTGCTCTGCCACGTGTCAAAAAGAGATGGACCCTTGAATCTACTGGTTCACTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGATGTTGAGCCAATCAATGATTCTTTGGAAGATGATATTCATGAAAAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGAAAGAGACCGGGATAATGATAGAGACTATGATAGAGATCGGGGTCGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGAGATCGGGATCGGGATAGGGACAGGGATAGAGACAGAGATAGGGATAGGGATCGCTATCACCTTAGGGATGAGAAGGAATATGGCAGAGATCGAGATAGGGAAAGAGAAGGCAGGGAGAGGGAGAGGGAGAGGGAGAGGCGAGACAGAGATCGTGGTCGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGAGAGGATGGGGAGTACCGGAAGAGACACACCCGTAGCAGCATTAGTCCTAGAAGAAGGAACGGGGCAGAGGATAGAGAGGAGCCGAAGAGGAAGAAGGAAAAGAAAGAGAAGAAGGGAGACGGGGCAGGCGAGGAAGACCCCGAAATCGCAGAATGGAACAGAATTCGTGCTTCTCTTGGAATGGCACCTCTGAAGTAGATGTTTGTTGTTCTTCTTCTTCAGTTTGAATGAAGTGCGAGTGAATCATGTTGCATAACTGAAGGTTAGAGGTTGTTGTTATCCATATGAGGAGAGGCTTAAGGTTCTCTGTTTTGTGTATAATATTTGTTTAGTGCTATTACTGTGTTTGTCGAATGATAATATAAATTACATTTGGAAATAGAATAATGTTGGAAGGGTTTGGGTATTTATTTGTTTAATCGAGTGTAAGTGGTTGTGTTAGCCAGTGAGTCGTCCACCACCAAAGTTGGTATTGTTAATTACAAAGAATCCATATGTGCT

Coding sequence (CDS)

ATGGCAAATCGTACGGACCCAGCTGCGAAAAGCATAAGGGGGACGAATCCGCAGAACCTGGTGGAGAAGATTCTTCGCTCCAAGATCTATCAGAACAATTACTGGAAGGAGCAATGTTTTGGTTTGACGGCGGAGACATTGGTCGACAAAGCCATGGAGCTCGACCATCTCGGTGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTCGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATTAAGAACGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGACTCACTGGGACTGATGTTGATGTGTATCGTTACCTGGAGCCTCTGTACAACGATTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTAACGCACGTGGATGAAGTCATTGATGAACTTCTTACAAAAGATTATTCATGTGACATTGCTCTGCCACGTGTCAAAAAGAGATGGACCCTTGAATCTACTGGTTCACTGCCTGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGATGTTGAGCCAATCAATGATTCTTTGGAAGATGATATTCATGAAAAGAATTATTATCGAGGGAGAAGTCCTGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGAAAGAGACCGGGATAATGATAGAGACTATGATAGAGATCGGGGTCGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGAGATCGGGATCGGGATAGGGACAGGGATAGAGACAGAGATAGGGATAGGGATCGCTATCACCTTAGGGATGAGAAGGAATATGGCAGAGATCGAGATAGGGAAAGAGAAGGCAGGGAGAGGGAGAGGGAGAGGGAGAGGCGAGACAGAGATCGTGGTCGGAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGAGAGGATGGGGAGTACCGGAAGAGACACACCCGTAGCAGCATTAGTCCTAGAAGAAGGAACGGGGCAGAGGATAGAGAGGAGCCGAAGAGGAAGAAGGAAAAGAAAGAGAAGAAGGGAGACGGGGCAGGCGAGGAAGACCCCGAAATCGCAGAATGGAACAGAATTCGTGCTTCTCTTGGAATGGCACCTCTGAAGTAG

Homology

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BLAST of CmoCh05G011030.1 vs. Swiss-Prot
Match: PRP38_ARATH (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana GN=PRP38 PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-127
Identity = 272/406 (67.00%), Postives = 311/406 (76.60%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+ +WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK+R+KL+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRWTLE  G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKE+ E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YER----DRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
           Y+R    DRD+DRDY+R+RG GR+RDR+R+RD  R+RDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 GRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRN 360
                                RDR RRRS SRSR           RKRH    +      
Sbjct: 301 ---------------------RDRARRRSRSRSRD----------RKRHETDDV------ 354

Query: 361 GAEDREEPKRKKEKKEK-KGDGAGEEDPEIAEWNRIRASLGMAPLK 400
              DREEPK+KKEKKEK K DG    +PEIAE NR+RASLGM PL+
Sbjct: 361 --RDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

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BLAST of CmoCh05G011030.1 vs. Swiss-Prot
Match: PR38A_XENTR (Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis GN=prpf38a PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.3e-61
Identity = 161/324 (49.69%), Postives = 204/324 (62.96%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A S+ GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL ++GG 
Sbjct: 1   MANRTVKDAHSVHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR LGA Y+RLTGT  D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRTLGALYMRLTGTATDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE ID+LL ++  CD+ LPR++KR+ LE T  L  R
Sbjct: 121 EPLYNDYRKVKVQNRNGEFELMHVDEFIDQLLHEERVCDVILPRLQKRFVLEETEQLDPR 180

Query: 181 KSALE---DDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDR 240
            SALE   DD E  EE+ED +        + H +NY       R+ DR RR  S R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEDEDEKGRDPSPEHHRRNY-------RDLDRPRRSPSPRYR-- 240

Query: 241 DYERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRD 300
                R   R   R R R  +R       R+R R +   R R R R+R H    K  G  
Sbjct: 241 -----RSRSRS-PRRRSRSPKRRSPSPPRRERHRSKSPRRHRSRSRERRHRSKSKSPGHH 300

Query: 301 RDREREGRERERERERRDRDRGRR 322
           R        +  ER ++   + RR
Sbjct: 301 RSHRHRSHSKSPERSKKSHKKSRR 309

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BLAST of CmoCh05G011030.1 vs. Swiss-Prot
Match: PR38A_PONAB (Pre-mRNA-splicing factor 38A OS=Pongo abelii GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.9e-61
Identity = 164/327 (50.15%), Postives = 205/327 (62.69%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
            SALE+D ++ E  E+ E  ++ LE         R  SP      D RR S+R  D+   
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLE---------RVPSP------DHRRRSYRDLDKP-- 240

Query: 241 RDRDNDRDYDRDRGRG-RERDRDRER-----DRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
             R     Y R R R  R R R  +R      R+R R +   R R R RDR H    K  
Sbjct: 241 -RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSP 300

Query: 301 GRDRDREREGRERERERERRDRDRGRR 322
           G  R        +  ER ++   + RR
Sbjct: 301 GHHRSHRHRSHSKSPERSKKSHKKSRR 309

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BLAST of CmoCh05G011030.1 vs. Swiss-Prot
Match: PR38A_BOVIN (Pre-mRNA-splicing factor 38A OS=Bos taurus GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.9e-61
Identity = 164/327 (50.15%), Postives = 205/327 (62.69%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
            SALE+D ++ E  E+ E  ++ LE         R  SP      D RR S+R  D+   
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLE---------RVPSP------DHRRRSYRDLDKP-- 240

Query: 241 RDRDNDRDYDRDRGRG-RERDRDRER-----DRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
             R     Y R R R  R R R  +R      R+R R +   R R R RDR H    K  
Sbjct: 241 -RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSP 300

Query: 301 GRDRDREREGRERERERERRDRDRGRR 322
           G  R        +  ER ++   + RR
Sbjct: 301 GHHRSHRHRSHSKSPERSKKSHKKSRR 309

[Close]

BLAST of CmoCh05G011030.1 vs. Swiss-Prot
Match: PR38A_MACFA (Pre-mRNA-splicing factor 38A OS=Macaca fascicularis GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.9e-61
Identity = 164/327 (50.15%), Postives = 205/327 (62.69%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
            SALE+D ++ E  E+ E  ++ LE         R  SP      D RR S+R  D+   
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLE---------RVPSP------DHRRRSYRDLDKP-- 240

Query: 241 RDRDNDRDYDRDRGRG-RERDRDRER-----DRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
             R     Y R R R  R R R  +R      R+R R +   R R R RDR H    K  
Sbjct: 241 -RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSP 300

Query: 301 GRDRDREREGRERERERERRDRDRGRR 322
           G  R        +  ER ++   + RR
Sbjct: 301 GHHRSHRHRSHSKSPERSKKSHKKSRR 309

[Close]

BLAST of CmoCh05G011030.1 vs. TrEMBL
Match: A0A151U559_CAJCA (Pre-mRNA-splicing factor 38A OS=Cajanus cajan GN=KK1_007055 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 5.5e-155
Identity = 324/406 (79.80%), Postives = 353/406 (86.95%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVR+LGAFYLRLTG+D+DVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRLTGSDIDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKL DG F+LTHVDEVIDELLTKDYSCDIALPRVK+RWTLES GSL  R
Sbjct: 121 EPLYNDYRKLRRKLPDGQFALTHVDEVIDELLTKDYSCDIALPRVKRRWTLESLGSLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVR-ERDRDRRRDSHRHRDRDY 240
           +SALE+DFEEEEEKED +   D +ED  +EK+YYRGRSP R ERDRDRRRDSHR+RDRDY
Sbjct: 181 RSALEEDFEEEEEKEDNDQPADEIEDRAYEKDYYRGRSPTREERDRDRRRDSHRYRDRDY 240

Query: 241 ERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRD 300
             DRD DRDYDR+RGRG        RDRDRDRDRDRDR+RDRDRDRY LR+EK+YG    
Sbjct: 241 --DRDYDRDYDRERGRG--------RDRDRDRDRDRDRERDRDRDRYRLREEKDYG---- 300

Query: 301 REREGRERERERERRDRDRGRRRSHSRSRSRSKDRED---GEYRKRHTRSSISPRRR-NG 360
           REREG  RERER  RDRDRGRRRSHSRSRSRS+DR++   G+YRKRH+RSS+SPRR  +G
Sbjct: 301 REREG--RERERRDRDRDRGRRRSHSRSRSRSRDRKEHDGGDYRKRHSRSSVSPRRHGDG 360

Query: 361 AEDRE--EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
            ED E  + K KKEKKEKK DG    DPEIAE N++RA+LG+ PL+
Sbjct: 361 LEDGEPKKKKEKKEKKEKKDDGTDHPDPEIAEANKLRAALGLKPLR 390

[Close]

BLAST of CmoCh05G011030.1 vs. TrEMBL
Match: F6I4Q5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01660 PE=4 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 5.5e-155
Identity = 318/406 (78.33%), Postives = 351/406 (86.45%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEK+IV+EFIKNE+YKYVR+LGAFYLRLTG D DVY+YL
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEEYKYVRILGAFYLRLTGIDTDVYQYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKL+DG +SLTHVDEVIDELLTKDYSCD+ALPR+KKRWTLES G+L  R
Sbjct: 121 EPLYNDYRKLRRKLSDGNYSLTHVDEVIDELLTKDYSCDVALPRIKKRWTLESLGTLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           +SALEDDFEEEEEKE+ + + D L+   HEK+YYRGRSP RERDRDR+RDSHR+R     
Sbjct: 181 RSALEDDFEEEEEKEEDDQLMDELDVGAHEKDYYRGRSPARERDRDRKRDSHRYR----- 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
                DRDYDR+RGRGRE  RDRER+RDRD  RDR+R+RDRDRDRY LRD+KEYGRDR+R
Sbjct: 241 -----DRDYDRERGRGRE--RDRERERDRDSYRDRERERDRDRDRYRLRDDKEYGRDRER 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDRED---GEYRKRHTRSSISPRRRNGAE 360
           ERE     RERERRDRDRGRRRSHSRSRSRSKDR+D   G++RKRH RSS SPRRR    
Sbjct: 301 ERE--REGRERERRDRDRGRRRSHSRSRSRSKDRKDREGGDHRKRHARSSTSPRRRGDMP 360

Query: 361 D----REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           +    REEP++KKEKKEKK DG    DPEIAE NR+RASLG+ PLK
Sbjct: 361 EDGTTREEPRKKKEKKEKKDDGTDHPDPEIAEANRLRASLGLKPLK 392

[Close]

BLAST of CmoCh05G011030.1 vs. TrEMBL
Match: I1NJ40_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G238500 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 3.5e-154
Identity = 318/404 (78.71%), Postives = 346/404 (85.64%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVR+LGAFYLR+TG+D+DVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRITGSDIDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADG F+LTHVDEVIDELLTKDYSCDIALPRVKKRWTLES GSL  R
Sbjct: 121 EPLYNDYRKLRRKLADGQFTLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESLGSLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           +SALE+DFEEEEEKED E   D +ED  +EK++YRGRSP RERDRDRR DSHRHRDRDY 
Sbjct: 181 RSALEEDFEEEEEKEDNEQPVDEIEDKAYEKDHYRGRSPTRERDRDRRHDSHRHRDRDY- 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
            DRD DRDYDR+RGRGR              DRDRDR+RDRDRDRY LR+EK+YGRD   
Sbjct: 241 -DRDYDRDYDRERGRGR--------------DRDRDRERDRDRDRYRLREEKDYGRD--- 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDRED---GEYRKRHTRSSISPRRR-NGA 360
            REG  RERER  +DRDRGRRRSHSRSRSRS+DR +   G+YRKRH RSS+SPRR  +G 
Sbjct: 301 -REG--RERERREKDRDRGRRRSHSRSRSRSRDRREHDGGDYRKRHARSSVSPRRHGDGL 360

Query: 361 EDRE-EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           ED E + K+KKEKKEKK DG    DPEIAE N++RA+LG+ PL+
Sbjct: 361 EDGEPKKKKKKEKKEKKDDGTDHPDPEIAEANKLRAALGLKPLR 382

[Close]

BLAST of CmoCh05G011030.1 vs. TrEMBL
Match: A0A059B3E7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03270 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 7.9e-154
Identity = 311/406 (76.60%), Postives = 345/406 (84.98%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AKSIRGTNPQNL+EKI+RSKIYQN YWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 49  MANRTDPLAKSIRGTNPQNLIEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT 108

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPF+CLV+KMLQIQPEK+IV+EFIKNEDYKYVRVLGAFYLRLTG D+DVYRYL
Sbjct: 109 FGGNRKPTPFLCLVLKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGIDMDVYRYL 168

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK+R+KL  G F+LTHVDE+IDELLTKDYSCDIA+PR+KKRWTLES G+L  R
Sbjct: 169 EPLYNDYRKVRQKLTGGNFALTHVDEIIDELLTKDYSCDIAMPRIKKRWTLESAGALDLR 228

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRE----RDRDRRRDSHRHRD 240
           KSALEDDFEEEEEKE+ E ++D LED   EK+YYRGRSP RE    RDRDRRRDSHRHRD
Sbjct: 229 KSALEDDFEEEEEKEENEQLDDGLEDGAPEKDYYRGRSPTRERDRDRDRDRRRDSHRHRD 288

Query: 241 RDYERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGR 300
           RDY  DRD DRDYDR+RG              RDRDRDRDRDRDRDRDRY +RDE++YGR
Sbjct: 289 RDY--DRDYDRDYDRERGH-------------RDRDRDRDRDRDRDRDRYRVRDERDYGR 348

Query: 301 DRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDRED---GEYRKRHTRSSISPRRR 360
           +RD EREG    RER+RRDRDRGRRRS SRSRSRS+DR+D   GE+RKRH R S SP+RR
Sbjct: 349 ERDHEREG----RERDRRDRDRGRRRSQSRSRSRSRDRKDRDGGEHRKRHARGSTSPKRR 408

Query: 361 NGAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
              + REEPK+KKEKKEKK DG    DPEIAE NR+RASLG+ PLK
Sbjct: 409 GHEDGREEPKKKKEKKEKKDDGTDHPDPEIAEANRLRASLGLKPLK 435

[Close]

BLAST of CmoCh05G011030.1 vs. TrEMBL
Match: A0A0B2QJB0_GLYSO (Pre-mRNA-splicing factor 38A OS=Glycine soja GN=glysoja_023827 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 5.1e-153
Identity = 314/404 (77.72%), Postives = 343/404 (84.90%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVR+LGAFYLR+TG+D+DVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRILGAFYLRITGSDIDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADG F+LTHVDEVIDELLTKDYSCDIALPRVKKRWTLES GSL  R
Sbjct: 121 EPLYNDYRKLRRKLADGQFTLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESLGSLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           +SALE+DFEEEEEKED E   D +ED  +EK++YRGRSP RERDRDRR DSHRHRDRDY 
Sbjct: 181 RSALEEDFEEEEEKEDNEQPVDEIEDKAYEKDHYRGRSPTRERDRDRRHDSHRHRDRDY- 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
            DRD DRDYDR+RGRG                RDRDRDR+RDRDRY LR+EK+YGRDR+ 
Sbjct: 241 -DRDYDRDYDRERGRG----------------RDRDRDRERDRDRYRLREEKDYGRDRE- 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDRED---GEYRKRHTRSSISPRRR-NGA 360
                 RERER  +DRDRGRRRSHSRSRSRS+DR +   G+YRKRH RSS+SPRR  +G 
Sbjct: 301 -----GRERERREKDRDRGRRRSHSRSRSRSRDRREHDGGDYRKRHARSSVSPRRHGDGL 360

Query: 361 EDRE-EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           ED E + K+KKEKKEKK DG    DPEIAE N++RA+LG+ PL+
Sbjct: 361 EDGEPKKKKKKEKKEKKDDGTDHPDPEIAEANKLRAALGLKPLR 380

[Close]

BLAST of CmoCh05G011030.1 vs. TAIR10
Match: AT2G40650.1 (AT2G40650.1 PRP38 family protein)

HSP 1 Score: 457.2 bits (1175), Expect = 1.0e-128
Identity = 272/406 (67.00%), Postives = 311/406 (76.60%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+ +WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK+R+KL+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRWTLE  G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKE+ E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YER----DRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEY 300
           Y+R    DRD+DRDY+R+RG GR+RDR+R+RD  R+RDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 GRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRN 360
                                RDR RRRS SRSR           RKRH    +      
Sbjct: 301 ---------------------RDRARRRSRSRSRD----------RKRHETDDV------ 354

Query: 361 GAEDREEPKRKKEKKEK-KGDGAGEEDPEIAEWNRIRASLGMAPLK 400
              DREEPK+KKEKKEK K DG    +PEIAE NR+RASLGM PL+
Sbjct: 361 --RDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

[Close]

BLAST of CmoCh05G011030.1 vs. TAIR10
Match: AT5G37370.1 (AT5G37370.1 PRP38 family protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 100/340 (29.41%), Postives = 158/340 (46.47%), Query Frame = 1


Query: 18  QNLVEKILRSKIYQNNYWKEQCFGL-TAETLVDKAM-ELDHLGGTYGGN-RKPTPFMCLV 77
           ++L+EK+L   I  ++Y+KE  +GL T   ++D+   +++H+    GGN R P+   CL+
Sbjct: 12  ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71

Query: 78  MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKL 137
            K   ++   + +   +K+ D  Y+R +G  YLR       ++ + EP   D  +     
Sbjct: 72  YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPG- 131

Query: 138 ADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSL-----PARKSALEDDFE 197
           ++G   +T +   + +LL   Y  D   PR+      +   +L     P + S    D  
Sbjct: 132 SNG--RMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGSTGDMT 191

Query: 198 EEEEKEDVEP--INDSLEDDIHEKNYYR----GRSPVRER----------DRDRRRDSHR 257
              E     P  +  SL     ++  +R    G SPVR            D  ++R   R
Sbjct: 192 RGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRR 251

Query: 258 HRDRDYERDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKE 317
            + RDY  DRD+D          R+R+R+RE+DR+R+R RDR R+R+RD           
Sbjct: 252 SQSRDYYSDRDSD----------RQREREREKDRERERGRDRYRERERD----------- 311

Query: 318 YGRDRDREREGRERERERE-RRDRDRGRRRSHSRSRSRSK 333
           YG DR   R+   R R  +   DR R  RRS SRSRSRS+
Sbjct: 312 YGNDRRSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSRSR 326

[Close]

BLAST of CmoCh05G011030.1 vs. NCBI nr
Match: gi|659070196|ref|XP_008453888.1| (PREDICTED: pre-mRNA-splicing factor 38A [Cucumis melo])

HSP 1 Score: 681.8 bits (1758), Expect = 7.2e-193
Identity = 375/401 (93.52%), Postives = 387/401 (96.51%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKL+DGCFSL+HVDEVIDELLTKDYSCDIALPRVKKRWTLES+GSLP R
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKE+ EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDR--DRDRDRYHLRDEKEYGRDR 300
           RDRD DRDYDRDRGRGRERDRDRERDRDR+RDRDRDR+R  DRDRDRY LRDEKEYGRDR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRERDRDRDRERERDRDRDRYRLRDEKEYGRDR 300

Query: 301 DREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAED 360
           DREREGRERER    RDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS+SPRRR+G ED
Sbjct: 301 DREREGRERER----RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVED 360

Query: 361 REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           REEPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of CmoCh05G011030.1 vs. NCBI nr
Match: gi|778666982|ref|XP_011648848.1| (PREDICTED: pre-mRNA-splicing factor 38 [Cucumis sativus])

HSP 1 Score: 677.9 bits (1748), Expect = 1.0e-191
Identity = 372/399 (93.23%), Postives = 381/399 (95.49%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCD+ALPRVKKRWTLES GSLP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALEDDFEEEEEKE+ EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
           RDRD DRDYDRDRGRG      RERDRDRDRDRDRDRDRDRDRDRY LRDEKEYGRDRDR
Sbjct: 241 RDRDYDRDYDRDRGRG------RERDRDRDRDRDRDRDRDRDRDRYRLRDEKEYGRDRDR 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDRE 360
           EREG    RERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS+SPRRR+GAEDRE
Sbjct: 301 EREG----RERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGAEDRE 360

Query: 361 EPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           EPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 EPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 389

[Close]

BLAST of CmoCh05G011030.1 vs. NCBI nr
Match: gi|702443510|ref|XP_010024095.1| (PREDICTED: pre-mRNA-splicing factor 38 [Eucalyptus grandis])

HSP 1 Score: 571.2 bits (1471), Expect = 1.4e-159
Identity = 324/414 (78.26%), Postives = 359/414 (86.71%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AKSIRGTNPQNL+EKI+RSKIYQN YWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 1   MANRTDPLAKSIRGTNPQNLIEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPF+CLV+KMLQIQPEK+IV+EFIKNEDYKYVRVLGAFYLRLTG D+DVYRYL
Sbjct: 61  FGGNRKPTPFLCLVLKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYLRLTGIDMDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRK+R+KL  G F+LTHVDE+IDELLTKDYSCDIA+PR+KKRWTLES G+L  R
Sbjct: 121 EPLYNDYRKVRQKLTGGNFALTHVDEIIDELLTKDYSCDIAMPRIKKRWTLESAGALDLR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRE----RDRDRRRDSHRHRD 240
           KSALEDDFEEEEEKE+ E ++D LED   EK+YYRGRSP RE    RDRDRRRDSHRHRD
Sbjct: 181 KSALEDDFEEEEEKEENEQLDDGLEDGAPEKDYYRGRSPTRERDRDRDRDRRRDSHRHRD 240

Query: 241 RDYERDRDNDRDYDRDRGRGRERD--------RDRERDRDRDRDRDRDRDRDRDRDRYHL 300
           RDY  DRD DRDYDR+RGRGRERD        RDR+RDRDRDRDRDRDRDRDRDRDRY +
Sbjct: 241 RDY--DRDYDRDYDRERGRGRERDRDRDRDRERDRDRDRDRDRDRDRDRDRDRDRDRYRV 300

Query: 301 RDEKEYGRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDRED---GEYRKRHTR 360
           RDE++YGR+RD EREG    RER+RRDRDRGRRRS SRSRSRS+DR+D   GE+RKRH R
Sbjct: 301 RDERDYGRERDHEREG----RERDRRDRDRGRRRSQSRSRSRSRDRKDRDGGEHRKRHAR 360

Query: 361 SSISPRRRNGAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
            S SP+RR   + REEPK+KKEKKEKK DG    DPEIAE NR+RASLG+ PLK
Sbjct: 361 GSTSPKRRGHEDGREEPKKKKEKKEKKDDGTDHPDPEIAEANRLRASLGLKPLK 408

[Close]

BLAST of CmoCh05G011030.1 vs. NCBI nr
Match: gi|1009116775|ref|XP_015874956.1| (PREDICTED: pre-mRNA-splicing factor 38 [Ziziphus jujuba])

HSP 1 Score: 569.3 bits (1466), Expect = 5.2e-159
Identity = 321/404 (79.46%), Postives = 353/404 (87.38%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AKSIRGTNPQNLVEKI+RSKIYQN YWKEQCFGLTAETLVDKAMELDH+GGT
Sbjct: 1   MANRTDPTAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFI+N+DYKYVRVLGAFYLRLTGTD DVY+YL
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIRNDDYKYVRVLGAFYLRLTGTDTDVYQYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLR+KL DG FSLTHVDEVIDELLTKDYSCDIALPR+KKRWTLES G+L  R
Sbjct: 121 EPLYNDYRKLRQKLPDGRFSLTHVDEVIDELLTKDYSCDIALPRIKKRWTLESLGTLELR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           KSALE+DFEEEE+KE+ + ++D ++D  +EK+YYRGRSP RERDRDRRR+SHR+RDRDY 
Sbjct: 181 KSALEEDFEEEEDKEENDQLDDGMDDGAYEKDYYRGRSPARERDRDRRRESHRYRDRDY- 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
                DRDYDR+RGRGRE        RDRDRDRDRDRDRDRDRDRY LR+EKEYGRDRD 
Sbjct: 241 -----DRDYDRERGRGRE--------RDRDRDRDRDRDRDRDRDRYRLREEKEYGRDRDW 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDRE--DGEYRKRHTRSSISPRRRNGAED 360
           E       RERERRDRDRGRRRSHSRSRSRS+DR+  DG+YRKRH RSS+SPRRR+G+ D
Sbjct: 301 E------GRERERRDRDRGRRRSHSRSRSRSRDRKDRDGDYRKRHARSSVSPRRRDGSVD 360

Query: 361 ---REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
              REEPK+KKEKKEKK DG    DPEIAE NR+RASLG+ PLK
Sbjct: 361 NGHREEPKKKKEKKEKKNDGTDHPDPEIAEANRLRASLGLKPLK 384

[Close]

BLAST of CmoCh05G011030.1 vs. NCBI nr
Match: gi|225450673|ref|XP_002283131.1| (PREDICTED: pre-mRNA-splicing factor 38 [Vitis vinifera])

HSP 1 Score: 555.4 bits (1430), Expect = 7.8e-155
Identity = 318/406 (78.33%), Postives = 351/406 (86.45%), Query Frame = 1


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEK+IV+EFIKNE+YKYVR+LGAFYLRLTG D DVY+YL
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEEYKYVRILGAFYLRLTGIDTDVYQYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180
           EPLYNDYRKLRRKL+DG +SLTHVDEVIDELLTKDYSCD+ALPR+KKRWTLES G+L  R
Sbjct: 121 EPLYNDYRKLRRKLSDGNYSLTHVDEVIDELLTKDYSCDVALPRIKKRWTLESLGTLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240
           +SALEDDFEEEEEKE+ + + D L+   HEK+YYRGRSP RERDRDR+RDSHR+R     
Sbjct: 181 RSALEDDFEEEEEKEEDDQLMDELDVGAHEKDYYRGRSPARERDRDRKRDSHRYR----- 240

Query: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300
                DRDYDR+RGRGRE  RDRER+RDRD  RDR+R+RDRDRDRY LRD+KEYGRDR+R
Sbjct: 241 -----DRDYDRERGRGRE--RDRERERDRDSYRDRERERDRDRDRYRLRDDKEYGRDRER 300

Query: 301 EREGRERERERERRDRDRGRRRSHSRSRSRSKDRED---GEYRKRHTRSSISPRRRNGAE 360
           ERE     RERERRDRDRGRRRSHSRSRSRSKDR+D   G++RKRH RSS SPRRR    
Sbjct: 301 ERE--REGRERERRDRDRGRRRSHSRSRSRSKDRKDREGGDHRKRHARSSTSPRRRGDMP 360

Query: 361 D----REEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 400
           +    REEP++KKEKKEKK DG    DPEIAE NR+RASLG+ PLK
Sbjct: 361 EDGTTREEPRKKKEKKEKKDDGTDHPDPEIAEANRLRASLGLKPLK 392

The following BLAST results are available for this feature:

BLAST of CmoCh05G011030.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRP38_ARATH	1.8e-127	67.00	Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana GN=PRP38 PE=1 SV=1	[more]
PR38A_XENTR	1.3e-61	49.69	Pre-mRNA-splicing factor 38A OS=Xenopus tropicalis GN=prpf38a PE=2 SV=1	[more]
PR38A_PONAB	3.9e-61	50.15	Pre-mRNA-splicing factor 38A OS=Pongo abelii GN=PRPF38A PE=2 SV=1	[more]
PR38A_BOVIN	3.9e-61	50.15	Pre-mRNA-splicing factor 38A OS=Bos taurus GN=PRPF38A PE=2 SV=1	[more]
PR38A_MACFA	3.9e-61	50.15	Pre-mRNA-splicing factor 38A OS=Macaca fascicularis GN=PRPF38A PE=2 SV=1	[more]

BLAST of CmoCh05G011030.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151U559_CAJCA	5.5e-155	79.80	Pre-mRNA-splicing factor 38A OS=Cajanus cajan GN=KK1_007055 PE=4 SV=1	[more]
F6I4Q5_VITVI	5.5e-155	78.33	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01660 PE=4 SV=...	[more]
I1NJ40_SOYBN	3.5e-154	78.71	Uncharacterized protein OS=Glycine max GN=GLYMA_20G238500 PE=4 SV=1	[more]
A0A059B3E7_EUCGR	7.9e-154	76.60	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03270 PE=4 SV=1	[more]
A0A0B2QJB0_GLYSO	5.1e-153	77.72	Pre-mRNA-splicing factor 38A OS=Glycine soja GN=glysoja_023827 PE=4 SV=1	[more]

BLAST of CmoCh05G011030.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40650.1	1.0e-128	67.00	PRP38 family protein	[more]
AT5G37370.1	2.9e-06	29.41	PRP38 family protein	[more]

BLAST of CmoCh05G011030.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070196\|ref\|XP_008453888.1\|	7.2e-193	93.52	PREDICTED: pre-mRNA-splicing factor 38A [Cucumis melo]	[more]
gi\|778666982\|ref\|XP_011648848.1\|	1.0e-191	93.23	PREDICTED: pre-mRNA-splicing factor 38 [Cucumis sativus]	[more]
gi\|702443510\|ref\|XP_010024095.1\|	1.4e-159	78.26	PREDICTED: pre-mRNA-splicing factor 38 [Eucalyptus grandis]	[more]
gi\|1009116775\|ref\|XP_015874956.1\|	5.2e-159	79.46	PREDICTED: pre-mRNA-splicing factor 38 [Ziziphus jujuba]	[more]
gi\|225450673\|ref\|XP_002283131.1\|	7.8e-155	78.33	PREDICTED: pre-mRNA-splicing factor 38 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005037	PRP38

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh05G011030	CmoCh05G011030	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh05G011030.1	CmoCh05G011030.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G011030.1.exon.6	CmoCh05G011030.1.exon.6	exon
CmoCh05G011030.1.exon.5	CmoCh05G011030.1.exon.5	exon
CmoCh05G011030.1.exon.4	CmoCh05G011030.1.exon.4	exon
CmoCh05G011030.1.exon.3	CmoCh05G011030.1.exon.3	exon
CmoCh05G011030.1.exon.2	CmoCh05G011030.1.exon.2	exon
CmoCh05G011030.1.exon.1	CmoCh05G011030.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G011030.1.five_prime_UTR.1	CmoCh05G011030.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G011030.1.CDS.1	CmoCh05G011030.1.CDS.1	CDS
CmoCh05G011030.1.CDS.2	CmoCh05G011030.1.CDS.2	CDS
CmoCh05G011030.1.CDS.3	CmoCh05G011030.1.CDS.3	CDS
CmoCh05G011030.1.CDS.4	CmoCh05G011030.1.CDS.4	CDS
CmoCh05G011030.1.CDS.5	CmoCh05G011030.1.CDS.5	CDS
CmoCh05G011030.1.CDS.6	CmoCh05G011030.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G011030.1.three_prime_UTR.1	CmoCh05G011030.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..399 score: 2.6E
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 11..173 score: 1.9