CmoCh05G004050.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh05G004050.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPlant protein of unknown function (DUF247)
LocationCmo_Chr05 : 1841142 .. 1842403 (+)
Sequence length1014
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATAGTCAGACTGAAGTTGATCAGGCAAACGACAAATCATGCAATATAGGAGGAATTAATGAATCTGAACAAGGTGAACAACCTCGTCGTAATGTTGTACTATCCATAAAAGAAATGATAGACAAGCTACCTCCTGTTAATGTAGAATGTAGCATCTTTCGAGTTCCTAAACTGTTACGCAGTATGAATCATAGAGCCTATACCCCTTAAGTCATTTCCATAGGTCTATTTCACCACCATCGAAAGGATTTGTTAGTTACTGAGCCATATAAACTTCGACGTTTTTTGAACTTTCTAAGCCGTCTAGGTAATGAGAGGGATTCATTGGAGTTGCTTAAGAAAAATACTCAAACTTGAATGAAAGAAGTTCGAAATTGCTATGCAGAGCCCATAAACATGAATGATAAGGAATTTGTTAACATGATGGTTGTGGATGGTTGTTTCCTAGTAGAGTTTTTGATACAACATCACAACGGACGCTACCCAAATACATGCTTCCAAACTCCAAACAATTTAGATTTTACCTTCCACCAAAGATCTATCAAGCTATTTACTGATTTGATTATGTTGGAAAATCAAGTCCCTTTCTTCCTTCTTGAACGTCTGTTCCGCCTCATACCAAATATACCTCTGTCTCCTTTATAGAATTAACATATATATTTTTTAAATGCGAACTTGTTGACAATTATTCTCTTCCTGATCTATCGTCCATAAAACCAAAGCACTTGGTCGATTTTTTAAGCTTCTACTTCGTCTCAAAGACGTCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATTAATAACTGAGCTTCATGAGGTTGGTGTCACCATTAAGAAAGCAGAAAATGTCAAATGTGCAATGAACCTAAGTTTCAAAAATGGGATTTTCACAATCCCACCTTTAACTATTGATGATTTCTTCGAACACACCATGCGAAATCGGATAGCATTGGAGCATTTTCTCTTGGGAAATGAGAGCAAGTGTATCCAATATATCGCATTCATGGATGATTTGATAAGCACAGAGAAAGACGTGAATTTACTTGTGAAAGCTGGGATCATAATCAACAATATTGGAGGCCGTGATAAAGAAGTTTCAAAGTTGTTTAACAATCTATGCAAATTTGTTGAACAACCATGTGAAGGCGAGTTCAACAATACCAGCAAAGCTTTACGTAAGCATTGTGATGGACGATGGAACAAGGCACGAGCTTCACTTATGCATAACTATTGTAATACGCCGTAG

mRNA sequence

ATGGAAAATAGTCAGACTGAAGTTGATCAGGCAAACGACAAATCATGCAATATAGGAGGAATTAATGAATCTGAACAAGGTGAACAACCTCGTCGTAATGTTGTACTATCCATAAAAGAAATGATAGACAAGCTACCTCCTGTTAATGTAGAATGTAGCATCTTTCGAGTTCCTAAACTGTTACGCAAGCCCATAAACATGAATGATAAGGAATTTGTTAACATGATGGTTGTGGATGGTTGTTTCCTAGTAGAGTTTTTGATACAACATCACAACGGACGCTACCCAAATACATGCTTCCAAACTCCAAACAATTTAGATTTTACCTTCCACCAAAGATCTATCAAGCTATTTACTGATTTGATTATGTTGGAAAATCAAGTCCCTTTCTTCCTTCTTGAACAATTAACATATATATTTTTTAAATGCGAACTTGTTGACAATTATTCTCTTCCTGATCTATCGTCCATAAAACCAAAGCACTTGGTCGATTTTTTAAGCTTCTACTTCGTCTCAAAGACGTCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATTAATAACTGAGCTTCATGAGGTTGGTGTCACCATTAAGAAAGCAGAAAATGTCAAATGTGCAATGAACCTAAGTTTCAAAAATGGGATTTTCACAATCCCACCTTTAACTATTGATGATTTCTTCGAACACACCATGCGAAATCGGATAGCATTGGAGCATTTTCTCTTGGGAAATGAGAGCAAGTGTATCCAATATATCGCATTCATGGATGATTTGATAAGCACAGAGAAAGACGTGAATTTACTTGTGAAAGCTGGGATCATAATCAACAATATTGGAGGCCGTGATAAAGAAGTTTCAAAGTTGTTTAACAATCTATGCAAATTTGTTGAACAACCATGTGAAGGCGAGTTCAACAATACCAGCAAAGCTTTACGTAAGCATTGTGATGGACGATGGAACAAGGCACGAGCTTCACTTATGCATAACTATTGTAATACGCCGTAG

Coding sequence (CDS)

ATGGAAAATAGTCAGACTGAAGTTGATCAGGCAAACGACAAATCATGCAATATAGGAGGAATTAATGAATCTGAACAAGGTGAACAACCTCGTCGTAATGTTGTACTATCCATAAAAGAAATGATAGACAAGCTACCTCCTGTTAATGTAGAATGTAGCATCTTTCGAGTTCCTAAACTGTTACGCAAGCCCATAAACATGAATGATAAGGAATTTGTTAACATGATGGTTGTGGATGGTTGTTTCCTAGTAGAGTTTTTGATACAACATCACAACGGACGCTACCCAAATACATGCTTCCAAACTCCAAACAATTTAGATTTTACCTTCCACCAAAGATCTATCAAGCTATTTACTGATTTGATTATGTTGGAAAATCAAGTCCCTTTCTTCCTTCTTGAACAATTAACATATATATTTTTTAAATGCGAACTTGTTGACAATTATTCTCTTCCTGATCTATCGTCCATAAAACCAAAGCACTTGGTCGATTTTTTAAGCTTCTACTTCGTCTCAAAGACGTCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATTAATAACTGAGCTTCATGAGGTTGGTGTCACCATTAAGAAAGCAGAAAATGTCAAATGTGCAATGAACCTAAGTTTCAAAAATGGGATTTTCACAATCCCACCTTTAACTATTGATGATTTCTTCGAACACACCATGCGAAATCGGATAGCATTGGAGCATTTTCTCTTGGGAAATGAGAGCAAGTGTATCCAATATATCGCATTCATGGATGATTTGATAAGCACAGAGAAAGACGTGAATTTACTTGTGAAAGCTGGGATCATAATCAACAATATTGGAGGCCGTGATAAAGAAGTTTCAAAGTTGTTTAACAATCTATGCAAATTTGTTGAACAACCATGTGAAGGCGAGTTCAACAATACCAGCAAAGCTTTACGTAAGCATTGTGATGGACGATGGAACAAGGCACGAGCTTCACTTATGCATAACTATTGTAATACGCCGTAG
BLAST of CmoCh05G004050.1 vs. Swiss-Prot
Match: Y3720_ARATH (UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.5e-15
Identity = 81/303 (26.73%), Postives = 125/303 (41.25%), Query Frame = 1

Query: 75  MMVVDGCF-LVEFLIQHHNGRYPNTCFQTPNNLDFTFHQRSIKLFTDLIMLENQVPFFLL 134
           MMV+DGCF L+ FLI   N        +   +  F+       + +DL++LENQVPFF+L
Sbjct: 136 MMVLDGCFILMVFLIMSGN-------IELSEDPIFSIPWLLSSIQSDLLLLENQVPFFVL 195

Query: 135 EQL---------------TYIFFKCELVDNYSLPDLS-SIKPKHLVDFLSFYFVSKTSL- 194
           + L                + FFK  +    S  +   + K KHL+D +   F+  TS  
Sbjct: 196 QTLYVGSKIGVSSDLNRIAFHFFKNPIDKEGSYWEKHRNYKAKHLLDLIRETFLPNTSES 255

Query: 195 -------------ENNNNNSPITP----PLITELHEV---GVTIK-KAENVKCAMNLSFK 254
                        E  + N P       PLI     +   G+  + +       +N+  K
Sbjct: 256 DKASSPHVQVQLHEGKSGNVPSVDSKAVPLILSAKRLRLQGIKFRLRRSKEDSILNVRLK 315

Query: 255 NGIFTIPPLTIDDFFEHTMRNRIALEHFLLGNESKCIQYIAFMDDLISTEKDVNLLVKAG 314
                IP L  D F      N +A E F   + ++   YI FM  L++ E+DV  L    
Sbjct: 316 KNKLQIPQLRFDGFISSFFLNCVAFEQFYTDSSNEITTYIVFMGCLLNNEEDVTFLRNDK 375

Query: 315 IIINNIGGRDKEVSKLFNNLCKFVEQPCEGEF-NNTSKALRKHCDGRWNKARASLMHNYC 338
           +II N  G + EVS+ F  + K V    +  + NN  K + ++    +N   A   H + 
Sbjct: 376 LIIENHFGSNNEVSEFFKTISKDVVFEVDTSYLNNVFKGVNEYTKKWYNGLWAGFRHTHF 431

BLAST of CmoCh05G004050.1 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.9e-72
Identity = 154/302 (50.99%), Postives = 196/302 (64.90%), Query Frame = 1

Query: 65  INMNDKEFVNMMVVDGCFLVEFLI-QHHNGRYPNTCF--QTPNNLDFTFHQRSIK-LFTD 124
           I+MND++F+ MM++DGCF+VEF I  +   + P+  F  +  NN+  +F++  I  +  D
Sbjct: 144 IDMNDEDFIKMMLMDGCFIVEFFILDYEEYKMPDESFFPKIENNVSMSFYKERIPDIDDD 203

Query: 125 LIMLENQVPFFLLE-----------------QLTYIFFKCELVDNYSLPDLSSIKPKHLV 184
           LI LENQ+PFF+L+                 +LT  + K   ++NY   D+ SI+PKH +
Sbjct: 204 LIKLENQLPFFILQHLYDLIPKQDDNPKCFKELTCKYLKMGWLENYEPSDIQSIEPKHFI 263

Query: 185 DFLSFYFVSKTSLENNNNNSP------ITPPLITELHEVGVTIKKAENVKCAMNLSFKNG 244
           DFLSFYFV     E++  +S       I PP ITEL E GVTIKKAEN KC MN+ FKNG
Sbjct: 264 DFLSFYFVPHHRCEHDKKSSDLEEWNVIIPPSITELFEAGVTIKKAENTKCLMNIKFKNG 323

Query: 245 IFTIPPLTIDDFFEHTMRNRIALEHFLLG-NESKCIQYIAFMDDLISTEKDVNLLVKAGI 304
           I  IPPL IDD+FE  MR+ +A EHF +    +  I YI FMD LISTE DVNLLVK  I
Sbjct: 324 ILEIPPLHIDDYFEPMMRDLLAFEHFPIEVQNTYVIPYITFMDYLISTENDVNLLVKEKI 383

Query: 305 IINNIGGRDKEVSKLFNNLCKFVEQPCEG-EFNNTSKALRKHCDGRWNKARASLMHNYCN 338
           IIN+IGG D+EVS+LFNNLCKFV        FN+ S+ LRKHCD  WNKA+A+L HNYCN
Sbjct: 384 IINDIGGSDREVSQLFNNLCKFVSSSFNNIYFNDISERLRKHCDRWWNKAKATLKHNYCN 443

BLAST of CmoCh05G004050.1 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-63
Identity = 137/243 (56.38%), Postives = 162/243 (66.67%), Query Frame = 1

Query: 120 DLIMLENQVPFFLLE-----------------QLTYIFFKCELVDNYSLPDLSSIKPKHL 179
           DLI LENQ+PFF+L+                 QLTY +     ++NY   D+ SIKPKH 
Sbjct: 174 DLIKLENQLPFFVLQHLFDLIPKHNDNPNCFKQLTYKYLNMGWLENYEPSDILSIKPKHF 233

Query: 180 VDFLSFYFVSKTSLENNNNNSP------ITPPLITELHEVGVTIKKAENVKCAMNLSFKN 239
           +DFLSFYFV     E++  +S       I PP ITEL E GVTIKKAEN KC MN+ F+N
Sbjct: 234 IDFLSFYFVPHHRCEHDQESSDMKEWNVIIPPSITELCEAGVTIKKAENTKCLMNIRFEN 293

Query: 240 GIFTIPPLTIDDFFEHTMRNRIALEHFLLG-NESKCIQYIAFMDDLISTEKDVNLLVKAG 299
           GI  IPPL IDD+FE  MRN +A EHF +  N +  I Y+ FMD LISTEKDVNLLVK  
Sbjct: 294 GILEIPPLHIDDYFEPMMRNLLAFEHFPVEVNNTYVIPYVTFMDYLISTEKDVNLLVKEK 353

Query: 300 IIINNIGGRDKEVSKLFNNLCKFV-EQPCEGEFNNTSKALRKHCDGRWNKARASLMHNYC 338
           IIIN+IGG D+EVS+LFNNLCKFV   P +  FNN S+ LR+HCD  WNKA+ASL HNY 
Sbjct: 354 IIINDIGGSDREVSQLFNNLCKFVSSSPNDNYFNNISEGLREHCDRWWNKAKASLKHNYF 413

BLAST of CmoCh05G004050.1 vs. TrEMBL
Match: A0A0A0LQ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.1e-61
Identity = 147/322 (45.65%), Postives = 186/322 (57.76%), Query Frame = 1

Query: 63  KPINMNDKEFVNMMVVDGCFLVEFLIQ-----HHNGRYPNTCFQTPNNLDFTFHQRSIKL 122
           +PI M D+EF+ MM+VD CF+VEF +      H +G+  N        L   ++    ++
Sbjct: 132 EPIKMKDEEFIIMMLVDACFIVEFFLLYYGSFHEDGKLFNA------ELSLFYYGVFYEI 191

Query: 123 FTDLIMLENQVPFFLLEQL----------------------------TYIFFK-CELVDN 182
             DLI LENQVPFFLL+ L                            TY+  K    V  
Sbjct: 192 LLDLIKLENQVPFFLLQNLFDLMPKDKVDISSIIGGYKDSPISLIDLTYMVLKEFGFVRE 251

Query: 183 YSLPDLSSIKPKHLVDFLSFYFVSKTSLENNNNNS----------PITPPLITELHEVGV 242
           Y + +L    PKHL+DFLSFYF+      NN N             ++PP  TEL E GV
Sbjct: 252 YKINNLYHKNPKHLLDFLSFYFLPVPP--NNWNRKFDHVKISKQWRLSPPTTTELCEAGV 311

Query: 243 TIK--KAENVKCAMNLSFKNGIFTIPPLTIDDFFEHTMRNRIALEHFLLGNESK-CIQYI 302
           TIK  K +N  C MN+SFKNG+  IPP+ I+  FE  +RN +A E F  GN+ K  IQY+
Sbjct: 312 TIKVAKRKNNLCFMNISFKNGVLEIPPIVIEGTFEVLIRNVLAFEIFPAGNQKKYAIQYV 371

Query: 303 AFMDDLISTEKDVNLLVKAGIIINNIGGRDKEVSKLFNNLCKFVEQPCEGEFNNTSKALR 338
            F+DDLISTEKD+ LLVKAG+IIN+ GG DKEVS+LFN+L K V  P    F++TSKALR
Sbjct: 372 TFLDDLISTEKDLCLLVKAGVIINDTGGSDKEVSELFNSLTKLVTTPLPSYFDDTSKALR 431

BLAST of CmoCh05G004050.1 vs. TrEMBL
Match: A0A0A0LC32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825000 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.6e-46
Identity = 121/304 (39.80%), Postives = 166/304 (54.61%), Query Frame = 1

Query: 65  INMNDKEFVNMMVVDGCFLVEFLIQHHNGRYPNTCFQTPNNLDFTFHQRSIKLFTDLIML 124
           I+MN  +FV+M++VDGCF+VEFLI     +   T    P          +I L+ DLI+L
Sbjct: 103 ISMNSHDFVHMLLVDGCFVVEFLIASEQLQTQTTSRVDP----LVSKAMNINLYHDLILL 162

Query: 125 ENQVPFFLLEQLTYI-------------------FFKCELVDNYSLPDLSSIKP-----K 184
           ENQ+PFF+L+ L Y                    FF+   + +Y     +   P     +
Sbjct: 163 ENQLPFFVLQGLLYFIDEPNNDDSFTVLVNIVHNFFQANFMKHYCKIPQNIFSPTRKNIR 222

Query: 185 HLVDFLSFYFVSKTS--LENNNNNSPITPPLITELHEVGVTIKKAENVK---CAMNLSFK 244
           HLVDFL FY+   T+  +   N+     PP  TEL+E GV ++KA         M +SF+
Sbjct: 223 HLVDFLGFYYSPTTTDIINQGNDRLLFLPPSTTELYEAGVILEKAITTNDHYNIMGISFE 282

Query: 245 NGIFTIPPLTIDDFFEHTMRNRIALEHFLLG--NESKCIQYIAFMDDLISTEKDVNLLVK 304
            G+  IPP  I D FE TMRN +A E+F  G  +ES  I YI F+  LIS EKD +LL+K
Sbjct: 283 GGVLKIPPFEIHDLFEITMRNLLAFENFQGGSASESSAIHYILFLGALISKEKDSSLLMK 342

Query: 305 AGIIINNIGGRDKEVSKLFNNLCKFVEQPCEGEFNNTSKALRKHCDGRWNKARASLMHNY 338
            GI+ N IGG D+EVS +FNN+ K V       +++TS+ LRKHCD + N+  A L  +Y
Sbjct: 343 KGILSNLIGGSDEEVSNMFNNIGKGVRFRGHFCYDSTSRNLRKHCDAKSNQWMAILKRDY 402

BLAST of CmoCh05G004050.1 vs. TrEMBL
Match: A0A0A0LSF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 133/333 (39.94%), Postives = 173/333 (51.95%), Query Frame = 1

Query: 63  KPIN-MNDKEFVNMMVVDGCFLVEFLIQHHNGRYPN----TCFQTPNNLDFTFHQRSIKL 122
           +PI+ M+D  FV MM++D CF+VEF IQ ++ ++             N+   F + +  +
Sbjct: 151 EPIDYMDDHNFVIMMLMDACFIVEFFIQMYDDQFDQDDQFPLISDKVNILSLFPEITDFI 210

Query: 123 FTDLIMLENQVPFFLLE----------------QLTYIFFKCELVDNYSLP--DLSSIKP 182
             DLI LENQVPFFLL+                 LTY   +   + NY +   D   +K 
Sbjct: 211 MFDLIKLENQVPFFLLQHVFDMIPRHNLHVSFIDLTYCALRIGFIFNYKIYSFDYDFVKK 270

Query: 183 --KHLVDFLSFYFV----SKTSLENNNNN-----SPITPPLITELHE------------- 242
             KHLV FLS YF+    +   ++N   N     S  +  L  EL +             
Sbjct: 271 DLKHLVHFLSLYFIPPPTTNDMIQNKKKNNYSFLSFFSRLLCCELCQNPDKENSDQEFLS 330

Query: 243 ---VGVTIKKAENVKCAMNLS------FKNGIFTIPPLTIDDFFEHTMRNRIALEHFLLG 302
              +    +    VK A N+       F NG+  IPPL I D FE   RN +A E F  G
Sbjct: 331 PPSITELNESGVTVKKAKNVESLMNITFTNGVLEIPPLNICDEFELLFRNLVAFEQFQAG 390

Query: 303 N-ESKCIQYIAFMDDLISTEKDVNLLVKAGIIINNIGGRDKEVSKLFNNLCKFVE-QPCE 338
           N +    QYI FMD+LI+T+KDV LLV +G+IINNIGG  KEVSKLFN L KF+   P  
Sbjct: 391 NGKMYATQYIIFMDNLINTKKDVRLLVNSGVIINNIGGSYKEVSKLFNKLGKFISGSPTS 450

BLAST of CmoCh05G004050.1 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30
Identity = 86/290 (29.66%), Postives = 145/290 (50.00%), Query Frame = 1

Query: 65  INMNDKEFVNMMVVDGCFLVEFLIQHHNGRYPNTCFQTPNNLDFTFHQRSIKLFTDLIML 124
           + ++  EFV M+VVDG FLVE L++ H   YP    +  N+  F        +  D+I++
Sbjct: 371 VKLHSDEFVEMLVVDGSFLVELLLRSH---YPR--LRGENDRIFGNSMMITDVCRDMILI 430

Query: 125 ENQVPFFLLEQLTYIFFK---------CELVDNYSLPDLSSI-------KPKHLVDFLSF 184
           ENQ+PFF+++++  +             +L   +    LS I       +P+H VD L  
Sbjct: 431 ENQLPFFVVKEIFLLLLNYYQQGTPSIIQLAQRHFSYFLSRIDDEKFITEPEHFVDLLRS 490

Query: 185 YFVSKTSLENNNNNSPI-TPPLITELHEVGVTIKKAENVKCAMNLSFKNGIFTIPPLTID 244
            ++ +  ++       +   P  TELH  GV  K AE   C +++SF +G+  IP + +D
Sbjct: 491 CYLPQFPIKLEYTTVKVDNAPEATELHTAGVRFKPAETSSCLLDISFADGVLKIPTIVVD 550

Query: 245 DFFEHTMRNRIALEHFLLGNESKCIQYIAFMDDLISTEKDVNLLVKAGIIINNIGGRDKE 304
           D  E   +N I  E     N++  + YI  +   I +  D +LL+ +GII+N + G   +
Sbjct: 551 DLTESLYKNIIGFEQCRCSNKN-FLDYIMLLGCFIKSPTDADLLIHSGIIVNYL-GNSVD 610

Query: 305 VSKLFNNLCKFVEQPCEGEFNNTSKALRKHCDGRWNKARASLMHNYCNTP 338
           VS LFN++ K V       F+  S+ L+ +C+  WN+ +A L  +Y + P
Sbjct: 611 VSNLFNSISKEVIYDRRFYFSMLSENLQAYCNTPWNRWKAILRRDYFHNP 653

BLAST of CmoCh05G004050.1 vs. TAIR10
Match: AT5G11290.1 (AT5G11290.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 88/298 (29.53%), Postives = 147/298 (49.33%), Query Frame = 1

Query: 65  INMNDKEFVNMMVVDGCFLVEFLIQHHNGRYPNTCFQTPNNLDFTFHQRS--IKLFTDLI 124
           + ++  E+V M++VD  FLVE L++     Y          LD  + ++   + +  D++
Sbjct: 42  VRLSSDEYVKMLIVDASFLVELLLRSQFDVYRGM-------LDRIYGKQKMIVDVNHDVM 101

Query: 125 MLENQVPFFLLEQ---LTYIFFKCEL------VDNY------SLPD----LSSIKPKHLV 184
           +LENQ+P+F++E    L ++ +  EL      + N+      S+P     +S  K  H V
Sbjct: 102 LLENQLPYFVVEGMFGLLHVDYHRELPPLTRIIHNHFKKFWMSIPSFSRSISDSKICHFV 161

Query: 185 DFL-SFYFVSKTSLENNNNNSPITPPLITELHEVGVTIKKAENVKCAMNLSFKNGIFTIP 244
           D L S +     S    +     +     E+   GV ++ A+N  CA+++SF NG+ TIP
Sbjct: 162 DLLRSIHLPLVLSFPGGSMRMMDSVLSAKEIQNAGVKLQPADNNTCALDISFANGVLTIP 221

Query: 245 PLTIDDFFEHTMRNRIALE--HFLLGNESKCIQYIAFMDDLISTEKDVNLLVKAGIIINN 304
            + I+D  E   RN I  E  H L   ++  I Y+ F+   I +  D  L +  GII+N 
Sbjct: 222 KIKINDITESLYRNIILFEQCHRL---DAYFIHYMRFLSCFIRSPMDAELFIDHGIIVNR 281

Query: 305 IGGRDKEVSKLFNNLCKFVEQPCEGEFNNTSKA-LRKHCDGRWNKARASLMHNYCNTP 338
            G  + +VS+LFN++ K  E    G +  T    L+ HC+  WNK +A+L  +Y + P
Sbjct: 282 FGNAE-DVSRLFNSILK--ETSYSGFYYKTVYGNLQAHCNAPWNKWKATLRRDYFHNP 326

BLAST of CmoCh05G004050.1 vs. TAIR10
Match: AT3G50160.1 (AT3G50160.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 110.2 bits (274), Expect = 2.6e-24
Identity = 89/298 (29.87%), Postives = 138/298 (46.31%), Query Frame = 1

Query: 64  PINMNDKEFVNMMVVDGCFLVEFLIQHHNGRYPNTCFQ----TPNNLDFTFHQRSIKLFT 123
           PINMN  EF+ M+V+DG F++E       G      FQ     PN+  F        +  
Sbjct: 181 PINMNRNEFIEMLVLDGVFIIEIFKGTSEG------FQEIGYAPNDPVFGMRGLMQSIRR 240

Query: 124 DLIMLENQVPFFLLEQLTYIFFKCELVDNYSL----PDLSSIKPK----------HLVDF 183
           D++MLENQ+P+ +L+ L  +  + +++D  ++    P    + P           H +D 
Sbjct: 241 DMVMLENQLPWSVLKGLLQL-QRPDVLDKVNVQLFQPFFQPLLPTREVLTEEGGLHCLDV 300

Query: 184 LSFYFVSKTSLENNNNNSPITPP-----LITELHEVGVTIKKAENVKCAMNLSFKNGIFT 243
           L    +  +   + + +     P      +TEL   GV   + E      ++ FKNG   
Sbjct: 301 LRRGLLQSSGTSDEDMSMVNKQPQQLIHCVTELRNAGVEFMRKETGH-FWDIEFKNGYLK 360

Query: 244 IPPLTIDDFFEHTMRNRIALEHFLLGNESKCIQYIAFMDDLISTEKDVNLLVKAGIIINN 303
           IP L I D  +    N IA E   + +  K   YI FMD+LI++ +DV+ L   GII N 
Sbjct: 361 IPKLLIHDGTKSLFLNLIAFEQCHIKSSKKITSYIIFMDNLINSSEDVSYLHHYGIIENW 420

Query: 304 IGGRDKEVSKLFNNLCK-FVEQPCEGEFNNTSKALRKHCDGRWNKARASLMHNYCNTP 338
           +G  D EVS LFN L K  +  P +G  +  +  +  +   +WN  +A+L H Y N P
Sbjct: 421 LGS-DSEVSDLFNGLGKEVIFDPNDGYLSALTGEVNIYYRRKWNYLKATLRHKYFNNP 469

BLAST of CmoCh05G004050.1 vs. TAIR10
Match: AT2G28580.1 (AT2G28580.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 95.5 bits (236), Expect = 6.6e-20
Identity = 82/292 (28.08%), Postives = 137/292 (46.92%), Query Frame = 1

Query: 67  MNDKEFVNMMVVDGCFLVEFLIQHHNGRYPNTCFQTPNNLDFTFHQRSI----KLFTDLI 126
           +N K+FV M++ D  F++ F IQ        +        D  F+Q  +     +  DLI
Sbjct: 205 INTKDFVEMILHDSVFILLFFIQ------TGSTLNFNKKEDILFNQSRLINATAILEDLI 264

Query: 127 MLENQVPFFLLEQLTYIFFKCELVDNYSLPDLS------------SIKPKHLVDFLSFYF 186
           +LENQ+P+ LLE+L +  F   +    +  D++             ++ +H  D      
Sbjct: 265 LLENQLPYALLEKL-FEPFSSNVNTKETFRDITLRAFRFEGKIKEEVRFQHFTDLFRCVR 324

Query: 187 VSKTSL-ENNNNNSPITPPL-------ITELHEVGVT-IKKAENVKCAMNLSFKNGIFTI 246
           VS  SL E   N +   PP          +L   GV  +   E    ++ ++FK+GI  +
Sbjct: 325 VSTLSLTEEQINIAKNEPPKSRKIMYNADKLDSAGVNFVNVDEENDLSLVITFKDGILKM 384

Query: 247 PPLTIDDFFEHTMRNRIALEHFLLGNESKCIQYIAFMDDLISTEKDVNLLVKAGIIINNI 306
           P  T++D  E  +RN +ALE       +    YI+F+D LI+T++DV+LL K GI+ N +
Sbjct: 385 PCFTVEDNTERVVRNLMALEQCHYPRTTFVCDYISFLDFLINTDQDVDLLAKKGIVKNWL 444

Query: 307 GGRDKEVSKLFNNLCKFVEQPCEGEFNNTSKALRKHCDGRWNKARASLMHNY 334
            G    V+++ N LC  +       +++  + L KH D R N++  +L   Y
Sbjct: 445 -GHQGSVTEMVNKLCLGLVD-FGSHYSDIVENLNKHYDNRLNRSVGTLRRVY 487

BLAST of CmoCh05G004050.1 vs. TAIR10
Match: AT2G44930.1 (AT2G44930.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-18
Identity = 83/293 (28.33%), Postives = 130/293 (44.37%), Query Frame = 1

Query: 70  KEFVNMMVVDGCFLVEFLIQHHNGRYPNTCFQTPNNLDFTFHQRSI---------KLFTD 129
           ++FV+M+++D  F++   IQ        T        +  FH+  I          +  D
Sbjct: 183 QDFVDMILLDSVFILGVFIQ------AETTQNIKKKEEILFHEEDIIFQEPCLITTILED 242

Query: 130 LIMLENQVPFFLLEQLTYIFF-KCELVDNYSLPDLSSIKPK----------HLVDFLSFY 189
           LI+LENQ+P+ LLE+L+  FF   +  + +    L + + K          H  D     
Sbjct: 243 LILLENQLPYVLLEKLSKPFFANLKTKETFRDIILRAFRLKGEIKEGTNFRHFTDLFRRV 302

Query: 190 FVSKTSL--ENNNNNSPITPPLITELHEV------GVTIKKAENVK-CAMNLSFKNGIFT 249
            V    L  E   +     P +I  LH        GV   + E     ++ ++F+ GI  
Sbjct: 303 RVETLCLTKEQIKSAKDKPPEIIKSLHNADKLDSAGVDFVRLERKNDLSLVITFERGILE 362

Query: 250 IPPLTIDDFFEHTMRNRIALEHFLLGNESKCIQYIAFMDDLISTEKDVNLLVKAGIIINN 309
           IP    DD  E  MRN +ALE       +    YIAF+D LI T++DV+LLVK G+I N 
Sbjct: 363 IPCFLADDNTERIMRNLMALEQCHYPLTAYVCNYIAFLDFLIDTDQDVDLLVKKGVIKNW 422

Query: 310 IGGRDKEVSKLFNNLCKFVEQPCEGEFNNTSKALRKHCDGRWNKARASLMHNY 334
           + G    V+++ N LC  +       +   +  L KH + R N++ A+L   Y
Sbjct: 423 L-GHQASVAEMVNKLCLGLVD-FGSHYYGIADRLNKHYESRRNRSIATLRRVY 467

BLAST of CmoCh05G004050.1 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 8.3e-73
Identity = 156/303 (51.49%), Postives = 199/303 (65.68%), Query Frame = 1

Query: 65  INMNDKEFVNMMVVDGCFLVEFLI---QHHNGRYPNTCFQTPNNLDFTFHQRSIK-LFTD 124
           INMND++F+ MM+VDGCF+VEF I   + +N  + +   Q  NN+  +F++  I  +  D
Sbjct: 150 INMNDEDFIKMMLVDGCFIVEFFILDFEEYNESHESLFPQIENNVSMSFYKERIPDIDED 209

Query: 125 LIMLENQVPFFLLE-----------------QLTYIFFKCELVDNYSLPDLSSIKPKHLV 184
           LI LENQ+PFF+L+                 QLTY +     ++NY   D+ SIKPKH +
Sbjct: 210 LIKLENQLPFFVLQHLFDLIPKHKDAPNCFKQLTYEYLTMGWLENYEPSDILSIKPKHFI 269

Query: 185 DFLSFYFVSKTSLENNNNNSP------ITPPLITELHEVGVTIKKAE-NVKCAMNLSFKN 244
           DFLSFY V +   E++  ++       I PP ITE+ E GVTIKKA+ N KC +N+ F+N
Sbjct: 270 DFLSFYLVPEHQYEHDQKSNDEEEWNIIIPPSITEICEAGVTIKKADKNTKCLLNIRFEN 329

Query: 245 GIFTIPPLTIDDFFEHTMRNRIALEHFLLG-NESKCIQYIAFMDDLISTEKDVNLLVKAG 304
           GI  IPPL IDD+FE  MRN +A EHF +    +  I Y+ FMD LI TEKDVNLLVK  
Sbjct: 330 GILEIPPLHIDDYFEPMMRNLLAFEHFPVEVKNTYVIPYLTFMDYLIITEKDVNLLVKEK 389

Query: 305 IIINNIGGRDKEVSKLFNNLCKFV-EQPCEGEFNNTSKALRKHCDGRWNKARASLMHNYC 338
           IIIN+IGG D+EVS+LFNNLCKFV   P +  FN+TSKALR HCD RWNKA+ASL HNY 
Sbjct: 390 IIINDIGGSDREVSQLFNNLCKFVSSSPNDNYFNDTSKALRDHCDRRWNKAKASLKHNYF 449

BLAST of CmoCh05G004050.1 vs. NCBI nr
Match: gi|778674379|ref|XP_011650197.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 4.1e-72
Identity = 154/302 (50.99%), Postives = 196/302 (64.90%), Query Frame = 1

Query: 65  INMNDKEFVNMMVVDGCFLVEFLI-QHHNGRYPNTCF--QTPNNLDFTFHQRSIK-LFTD 124
           I+MND++F+ MM++DGCF+VEF I  +   + P+  F  +  NN+  +F++  I  +  D
Sbjct: 144 IDMNDEDFIKMMLMDGCFIVEFFILDYEEYKMPDESFFPKIENNVSMSFYKERIPDIDDD 203

Query: 125 LIMLENQVPFFLLE-----------------QLTYIFFKCELVDNYSLPDLSSIKPKHLV 184
           LI LENQ+PFF+L+                 +LT  + K   ++NY   D+ SI+PKH +
Sbjct: 204 LIKLENQLPFFILQHLYDLIPKQDDNPKCFKELTCKYLKMGWLENYEPSDIQSIEPKHFI 263

Query: 185 DFLSFYFVSKTSLENNNNNSP------ITPPLITELHEVGVTIKKAENVKCAMNLSFKNG 244
           DFLSFYFV     E++  +S       I PP ITEL E GVTIKKAEN KC MN+ FKNG
Sbjct: 264 DFLSFYFVPHHRCEHDKKSSDLEEWNVIIPPSITELFEAGVTIKKAENTKCLMNIKFKNG 323

Query: 245 IFTIPPLTIDDFFEHTMRNRIALEHFLLG-NESKCIQYIAFMDDLISTEKDVNLLVKAGI 304
           I  IPPL IDD+FE  MR+ +A EHF +    +  I YI FMD LISTE DVNLLVK  I
Sbjct: 324 ILEIPPLHIDDYFEPMMRDLLAFEHFPIEVQNTYVIPYITFMDYLISTENDVNLLVKEKI 383

Query: 305 IINNIGGRDKEVSKLFNNLCKFVEQPCEG-EFNNTSKALRKHCDGRWNKARASLMHNYCN 338
           IIN+IGG D+EVS+LFNNLCKFV        FN+ S+ LRKHCD  WNKA+A+L HNYCN
Sbjct: 384 IINDIGGSDREVSQLFNNLCKFVSSSFNNIYFNDISERLRKHCDRWWNKAKATLKHNYCN 443

BLAST of CmoCh05G004050.1 vs. NCBI nr
Match: gi|700207809|gb|KGN62928.1| (hypothetical protein Csa_2G380080 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 2.0e-63
Identity = 137/243 (56.38%), Postives = 162/243 (66.67%), Query Frame = 1

Query: 120 DLIMLENQVPFFLLE-----------------QLTYIFFKCELVDNYSLPDLSSIKPKHL 179
           DLI LENQ+PFF+L+                 QLTY +     ++NY   D+ SIKPKH 
Sbjct: 174 DLIKLENQLPFFVLQHLFDLIPKHNDNPNCFKQLTYKYLNMGWLENYEPSDILSIKPKHF 233

Query: 180 VDFLSFYFVSKTSLENNNNNSP------ITPPLITELHEVGVTIKKAENVKCAMNLSFKN 239
           +DFLSFYFV     E++  +S       I PP ITEL E GVTIKKAEN KC MN+ F+N
Sbjct: 234 IDFLSFYFVPHHRCEHDQESSDMKEWNVIIPPSITELCEAGVTIKKAENTKCLMNIRFEN 293

Query: 240 GIFTIPPLTIDDFFEHTMRNRIALEHFLLG-NESKCIQYIAFMDDLISTEKDVNLLVKAG 299
           GI  IPPL IDD+FE  MRN +A EHF +  N +  I Y+ FMD LISTEKDVNLLVK  
Sbjct: 294 GILEIPPLHIDDYFEPMMRNLLAFEHFPVEVNNTYVIPYVTFMDYLISTEKDVNLLVKEK 353

Query: 300 IIINNIGGRDKEVSKLFNNLCKFV-EQPCEGEFNNTSKALRKHCDGRWNKARASLMHNYC 338
           IIIN+IGG D+EVS+LFNNLCKFV   P +  FNN S+ LR+HCD  WNKA+ASL HNY 
Sbjct: 354 IIINDIGGSDREVSQLFNNLCKFVSSSPNDNYFNNISEGLREHCDRWWNKAKASLKHNYF 413

BLAST of CmoCh05G004050.1 vs. NCBI nr
Match: gi|659088836|ref|XP_008445187.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 3.9e-62
Identity = 146/307 (47.56%), Postives = 181/307 (58.96%), Query Frame = 1

Query: 64  PINMNDKE-FVNMMVVDGCFLVEFLIQHHNGRYPNTCF-QTPNNLDFTFHQ-RSIKLFTD 123
           PIN  D + FV MM+VD CF+VEFLI   +  +PN  F Q  +N+D +F+Q   + +  D
Sbjct: 128 PINTIDMDAFVIMMLVDACFIVEFLILKFDYDHPNGKFLQIQDNIDISFYQGMDLHILYD 187

Query: 124 LIMLENQVPFFLLE-------------------QLTYIFFKCELVDNYSLPDLSSIKPKH 183
           LI LENQVPFFLL+                    LT    K  LV  Y +      +PKH
Sbjct: 188 LIKLENQVPFFLLQYLFDLIPKHDISMMISSFRDLTLRALKFRLVRTYEINLFK--EPKH 247

Query: 184 LVDFLSFYFVSKTSLENNNNNSPIT----------PPLITELHEVGVTIKKAENVKCAMN 243
            VD L+FYFV     + NN +              PP ITEL E GVTIKKAE  K   +
Sbjct: 248 FVDLLTFYFVPSAGQKVNNQHGIFKSTIEEKNRWIPPSITELREAGVTIKKAEKAKHLTD 307

Query: 244 LSFKNGIFTIPPLTIDDFFEHTMRNRIALEHFLLGNESK-CIQYIAFMDDLISTEKDVNL 303
           ++FKNG+  IPPL I D FE  +RN +A E       +K  IQY+ FMDDLISTEKDV L
Sbjct: 308 ITFKNGVLRIPPLHIYDEFELVLRNMVAFEQISARKMNKYVIQYVLFMDDLISTEKDVRL 367

Query: 304 LVKAGIIINNIGGRDKEVSKLFNNLCKFVEQPCEGEFNNTSKALRKHCDGRWNKARASLM 338
           LV+AG+IIN IGG DKEV+ LFNN CKF+  P    F++  K L +HC+GRWN+A+ASL 
Sbjct: 368 LVEAGVIINQIGGSDKEVADLFNNFCKFITAPKSSNFDSIIKDLCEHCNGRWNRAKASLK 427

BLAST of CmoCh05G004050.1 vs. NCBI nr
Match: gi|700207813|gb|KGN62932.1| (hypothetical protein Csa_2G380610 [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 7.3e-61
Identity = 147/322 (45.65%), Postives = 186/322 (57.76%), Query Frame = 1

Query: 63  KPINMNDKEFVNMMVVDGCFLVEFLIQ-----HHNGRYPNTCFQTPNNLDFTFHQRSIKL 122
           +PI M D+EF+ MM+VD CF+VEF +      H +G+  N        L   ++    ++
Sbjct: 132 EPIKMKDEEFIIMMLVDACFIVEFFLLYYGSFHEDGKLFNA------ELSLFYYGVFYEI 191

Query: 123 FTDLIMLENQVPFFLLEQL----------------------------TYIFFK-CELVDN 182
             DLI LENQVPFFLL+ L                            TY+  K    V  
Sbjct: 192 LLDLIKLENQVPFFLLQNLFDLMPKDKVDISSIIGGYKDSPISLIDLTYMVLKEFGFVRE 251

Query: 183 YSLPDLSSIKPKHLVDFLSFYFVSKTSLENNNNNS----------PITPPLITELHEVGV 242
           Y + +L    PKHL+DFLSFYF+      NN N             ++PP  TEL E GV
Sbjct: 252 YKINNLYHKNPKHLLDFLSFYFLPVPP--NNWNRKFDHVKISKQWRLSPPTTTELCEAGV 311

Query: 243 TIK--KAENVKCAMNLSFKNGIFTIPPLTIDDFFEHTMRNRIALEHFLLGNESK-CIQYI 302
           TIK  K +N  C MN+SFKNG+  IPP+ I+  FE  +RN +A E F  GN+ K  IQY+
Sbjct: 312 TIKVAKRKNNLCFMNISFKNGVLEIPPIVIEGTFEVLIRNVLAFEIFPAGNQKKYAIQYV 371

Query: 303 AFMDDLISTEKDVNLLVKAGIIINNIGGRDKEVSKLFNNLCKFVEQPCEGEFNNTSKALR 338
            F+DDLISTEKD+ LLVKAG+IIN+ GG DKEVS+LFN+L K V  P    F++TSKALR
Sbjct: 372 TFLDDLISTEKDLCLLVKAGVIINDTGGSDKEVSELFNSLTKLVTTPLPSYFDDTSKALR 431

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y3720_ARATH3.5e-1526.73UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LLX1_CUCSA2.9e-7250.99Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1[more]
A0A0A0LM96_CUCSA1.4e-6356.38Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1[more]
A0A0A0LQ57_CUCSA5.1e-6145.65Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1[more]
A0A0A0LC32_CUCSA4.6e-4639.80Uncharacterized protein OS=Cucumis sativus GN=Csa_3G825000 PE=4 SV=1[more]
A0A0A0LSF4_CUCSA5.1e-4539.94Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G31980.11.4e-3029.66 unknown protein[more]
AT5G11290.11.5e-2429.53 Plant protein of unknown function (DUF247)[more]
AT3G50160.12.6e-2429.87 Plant protein of unknown function (DUF247)[more]
AT2G28580.16.6e-2028.08 Plant protein of unknown function (DUF247)[more]
AT2G44930.12.1e-1828.33 Plant protein of unknown function (DUF247)[more]
Match NameE-valueIdentityDescription
gi|659088838|ref|XP_008445188.1|8.3e-7351.49PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo][more]
gi|778674379|ref|XP_011650197.1|4.1e-7250.99PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus][more]
gi|700207809|gb|KGN62928.1|2.0e-6356.38hypothetical protein Csa_2G380080 [Cucumis sativus][more]
gi|659088836|ref|XP_008445187.1|3.9e-6247.56PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo][more]
gi|700207813|gb|KGN62932.1|7.3e-6145.65hypothetical protein Csa_2G380610 [Cucumis sativus][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004158DUF247_pln
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh05G004050CmoCh05G004050gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh05G004050.1CmoCh05G004050.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G004050.1.exon.1CmoCh05G004050.1.exon.1exon
CmoCh05G004050.1.exon.2CmoCh05G004050.1.exon.2exon
CmoCh05G004050.1.exon.3CmoCh05G004050.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G004050.1.CDS.1CmoCh05G004050.1.CDS.1CDS
CmoCh05G004050.1.CDS.2CmoCh05G004050.1.CDS.2CDS
CmoCh05G004050.1.CDS.3CmoCh05G004050.1.CDS.3CDS


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 63..337
score: 6.1
NoneNo IPR availablePANTHERPTHR31549FAMILY NOT NAMEDcoord: 66..337
score: 5.7