CmoCh05G003410.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh05G003410.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr05 : 1528780 .. 1531032 (+)
Sequence length766
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGTAGGATTCTCTAGTTCGACCGAGTAGGGCTGTAAATTTTAAACCCTCGATTTAGGGTTTGTCTTGTTCATTCTTCAATCTCTTCATCTATCTTTCTCGGGTGAAAATGGCGAACGAGCAACAGTCATCTACAGGGCCCTGGATCCTCGAAGCAATGCCTTTCATCGTTGTTCTTCTCATAGCAGCTCATGTCTTTGCTTTGGTACTCTCTAACTCCGATTTTTGTTTCGTTTTTTTTGCATTGTATTCAAGCTCTGTACTCTGTTGTTTGCTCATTTCCTCTTGATTTCTGTAGGTATATTGGATTTATAAGTTGGCAGCCCAAAAACAACCTCCGAGGAGGAAGGCACACTGAGTTACTGTATGATTCGTTCCTGAAAGAAACTTCAGCGAAACCGAATTCGTTAATTATTGCGTATCTAATGTTGAGGAGGCGGTCACAAAAGCCATGTAACGATGTTTCTCTGTAAGTATCCTCAGTATGTACTCTCAGAATCTCAGTTTCGTATTGTAAGAATATGGAAATGTTTCTTACAAACCAAATTTGATTTGTATGGTTTTTCAATTCATAGAATTATAAGGCGATCCGTTGATATATCTGTAATCTTGTTTGGTTTTCATTATCTTGAAAAGCTGGCTTATTCGTTTATTAGCATGCTTCCATCACGATAGGTGAGGAATCACCAGGTCAAGAAATGATCGAATACATTTTATTCTGAGTCCATTATTGAAGAGTCTGTTTTCGGTACATATAAACTACAACTTTAACATTCGAAACTTTTTAAGGAAAAGATAAAAGAGTTGGGGAAAGTATCCTTGCTGTAGATTTCTCCATTAAGAGTAACTGGCTCTGCTCCTTGTTCCACGAAGAAATGGATTGCTGCTGCTTCTTGTGGAGTGAGAGCTCCATTAATTCCTAGCAGAATTAGTGAATAGTGACAAAACTTTTCTAACTAGGCAAATTTTGCTTGAACTCGTGCAGCACTTTTAATATCATTGTGTGAGATCCCACGTCGATTCGAGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAACAGACGTGTCTTAAAAACTTTGAGGAGAAGTTCGAAGGGAAAAGCTCAAAAAGGACAATATCTGCTAGCAGTGGACTTGGGTTATTACACGTTGTTTATTTCGTGCTTTTTATATATATTTATAAAAAGAATCTCCTAGTTTTGGTAATGGTTTTAGCTGGACTCTTGAACATACATTAGTGGAAGTACCTTTTTCCAGCTCATTTTCTGTTGAAGATGAATGGGCCATCAAATCAACTAATATAATGTCTAAAGTGTGTTTGTAGTAATTTGATGGTAAATCTTCATTGTTATTCAATCATCAAATGGCTTTATCAATGTCCAATAATGCATTTCACAACATGATCATGATGAAAATATGTTTGTCTCTCTTTTCCAATTTGTATTCTGTCCTTCTGTCAACAAAAAGAAGAAAATTACCCATTAGCTAGTTGCTGTCTTTTGTTCCCTTATTTGAAAGGCTTGTCACTTCCAAAGCACCATTTACCTCAAAAACACTAGCAAGTAGTAGTGAATGGTGAGTGGTGACTCACACTATGGCAGCAAATTAGAGCTTATTGCTTTCTCCATTACATGTAAAGTTCATACCTAACTGGTAGAAGAATCTTATTTGCATAGGAAAAGAAAGAAACTTTGTGCTCATTTTCTCACTTTTCCATGGCATCAATAGAAGCAATATGTGGTAAGAAATTGGATTTATAGAAATGTGGGAGTGGCTCTTTCTTACAAAGGGATTCTAGCTGTCTATCCAAGCAATCTTGTATGGTGACTTGTACTTTTTGCTTTTCCAGCTCAGGCAAATCCCAGGACTTGTAGCATCAATAGATGCTTTCTTCATGTTAGTCTTGTCCGGTTGGCGATTGTCGATTGCTATTGACCCACTATCGATTTACAGGTATATTACTGTGGTAATTTTTTTTGTTCTTCATTAGCCATCTGAATTCAAAGCACTTGATAAGATATTCCTGTAGTATAAGTAAGCCTATGCCATGTTCTTTTTCATTTCTTCAATGTTTTCCTTACTTGATTCGATCTTAGGAATATAGATGTCGGACTCCAACAATCTTACTCTCGAATAAAGTACCATTGAGTCTCTCCTTAGATAGTCATCTATCTGTCTGACACTATCTAGAAAACTTTTCTTTTTTTAGAGTATATCGCTAGTTCAATAGAGCTCTACCA

mRNA sequence

CGGTAGGATTCTCTAGTTCGACCGAGTAGGGCTGTAAATTTTAAACCCTCGATTTAGGGTTTGTCTTGTTCATTCTTCAATCTCTTCATCTATCTTTCTCGGGTGAAAATGGCGAACGAGCAACAGTCATCTACAGGGCCCTGGATCCTCGAAGCAATGCCTTTCATCGTTGTTCTTCTCATAGCAGCTCATGTCTTTGCTTTGGTATATTGGATTTATAAGTTGGCAGCCCAAAAACAACCTCCGAGGAGGAAGGCACACTGAGTTACTGTATGATTCGTTCCTGAAAGAAACTTCAGCGAAACCGAATTCGTTAATTATTGCGTATCTAATGTTGAGGAGGCGGTCACAAAAGCCATGTAACGATGTTTCTCTCTCAGGCAAATCCCAGGACTTGTAGCATCAATAGATGCTTTCTTCATGTTAGTCTTGTCCGGTTGGCGATTGTCGATTGCTATTGACCCACTATCGATTTACAGGTATATTACTGTGGTAATTTTTTTTGTTCTTCATTAGCCATCTGAATTCAAAGCACTTGATAAGATATTCCTGTAGTATAAGTAAGCCTATGCCATGTTCTTTTTCATTTCTTCAATGTTTTCCTTACTTGATTCGATCTTAGGAATATAGATGTCGGACTCCAACAATCTTACTCTCGAATAAAGTACCATTGAGTCTCTCCTTAGATAGTCATCTATCTGTCTGACACTATCTAGAAAACTTTTCTTTTTTTAGAGTATATCGCTAGTTCAATAGAGCTCTACCA

Coding sequence (CDS)

ATGTCTTTGCTTTGGTATATTGGATTTATAAGTTGGCAGCCCAAAAACAACCTCCGAGGAGGAAGGCACACTGAGTTACTGTATGATTCGTTCCTGAAAGAAACTTCAGCGAAACCGAATTCGTTAATTATTGCGTATCTAATGTTGAGGAGGCGGTCACAAAAGCCATGTAACGATGTTTCTCTCTCAGGCAAATCCCAGGACTTGTAG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh05G003410CmoCh05G003410gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh05G003410.1CmoCh05G003410.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G003410.1.exon.1CmoCh05G003410.1.exon.1exon
CmoCh05G003410.1.exon.2CmoCh05G003410.1.exon.2exon
CmoCh05G003410.1.exon.3CmoCh05G003410.1.exon.3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G003410.1.five_prime_UTR.1CmoCh05G003410.1.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G003410.1.CDS.1CmoCh05G003410.1.CDS.1CDS
CmoCh05G003410.1.CDS.2CmoCh05G003410.1.CDS.2CDS
CmoCh05G003410.1.CDS.3CmoCh05G003410.1.CDS.3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh05G003410.1.three_prime_UTR.1CmoCh05G003410.1.three_prime_UTR.1three_prime_UTR