CmoCh05G002420.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G002420.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein
Location	Cmo_Chr05 : 1034762 .. 1036256 (+)
Sequence length	1317

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGTCTCAGCACTCGTTCTTCGCCATTCACCATCGGACTCCTCGACGGGCAGTCGCACTTCTCGCCGTGCCGCCCCTTCGTCGTCGAAGCAACTGCAAGCAGCTTCTCCTCGCTGCAGCAGCCAAGACCATCGTTCGTTACTTCTCCTCGCCGCGCCGGTAGTTCGTCGTTCGCCACTAGTCCGTCGCAGAGCCACTCCTCGTTGGGCCATCGCTTCGCCAAAGTCTCCTCTGCAAAAGGAAAGTTAAAATTCTTTAAACTTAAAATCGAACCGGTCGGGTCGGTTCACTCGGGGTTGGGTCCAAACGTCACCGTACGATGTCAATAGGTTATCGTGCAGTGAAATGGAGGGAAAATTTGGCGCCATTACCGACGATGCTCTCTAGTCTTCCTCTATTTAAAGCCGTTTCGCCTTCTTCTAACCCCACACAGACCTGCGTCAATTTCAGGTTCAATTCTCATTTCTCCCGAACCCTAACAATGGCGCAGAACTGCCCCTCAGAAGACAATGTATCGTTGCGGTCGCCCAAGGTACCAAAGCTTGCTCATGAGAGCGGTGAGTCTGAAAGATTTAGCTATTCATCGACGCTTCTCAGAGTAAAGAAACTGTCCGATAATGCCGTGTTGCCATCGCGAGCCTCCGCTCTCTCCGCTGGTTACGATCTCTCCAGGTGACTTATCTGTGATTCTGTCTATGTCCATGAACTAGTGCAGGAAGTTTCAGTTCTTGACGTTTACCGTTATCATGTATGATAATATAGTGCAAAAGATACGATTATCCCTTCTCGAGGAAGAGGCTTGGTTCCGACTGATTTGAGCATCGCGATTCCGGACGGAACTTACGCTCGAATTGGTACTTCTAAATCTAATCTAAGTACGCATCATCTTACATCTTTCTTGCAATCTTGGACTGATACTGAAGTCTTTTCGCTATTTTGCAGCACCGCGTTCGGGTTTGGCTTTGAAGCATGCGATCGATGTTGGTGCGGGTGTGATAGATGCTGATTACAGAGGTCCCCTGGGAGTAATATTGTTCAATCACTCTGATGCGGATTTCGAGGTGAAGATGGGCGACAGAATCGCTCAACTGATTCTTGAGAAAATTGTGACGCCGGAGGTGCTGGAGGTCGAGGATTTGGATTCCACTCTCCGAGGTGAATCTGGCTTCGGCTCTACAGGTGTTTGAGAAATCTCTAACTACTTAGAAATGGCGGATTTGCAGTTCTTTTTCCCATTTTGCATCGTTTACCGTTGAATACATGATCATCAGACAACGAAAAAGAACTTTCTTCTGTATCTTGCTACTGAAATAAACGAATTACCAAATTTACATCTATTTGCAACTACTAGATGAGATGCCTGCTTAGAAATGGCAGATTTGCAGTTCTTTTTACCATTTTGCATCGTTTATCGTTGAATGCATGATCATCAGACAACGAAAAAGAATTTTCTTCTGTATCTTGCCTACTTCAATAAACGAATTATCAAATTTAC

mRNA sequence

TCGGTCTCAGCACTCGTTCTTCGCCATTCACCATCGGACTCCTCGACGGGCAGTCGCACTTCTCGCCGTGCCGCCCCTTCGTCGTCGAAGCAACTGCAAGCAGCTTCTCCTCGCTGCAGCAGCCAAGACCATCGTTCGTTACTTCTCCTCGCCGCGCCGGTAGTTCGTCGTTCGCCACTAGTCCGTCGCAGAGCCACTCCTCGTTGGGCCATCGCTTCGCCAAAGTCTCCTCTGCAAAAGGAAAGTTAAAATTCTTTAAACTTAAAATCGAACCGGTCGGGTCGGTTCACTCGGGGTTGGGTCCAAACGTCACCGTACGATGTCAATAGGTTATCGTGCAGTGAAATGGAGGGAAAATTTGGCGCCATTACCGACGATGCTCTCTAGTCTTCCTCTATTTAAAGCCGTTTCGCCTTCTTCTAACCCCACACAGACCTGCGTCAATTTCAGGTTCAATTCTCATTTCTCCCGAACCCTAACAATGGCGCAGAACTGCCCCTCAGAAGACAATGTATCGTTGCGGTCGCCCAAGGTACCAAAGCTTGCTCATGAGAGCGGTGAGTCTGAAAGATTTAGCTATTCATCGACGCTTCTCAGAGTAAAGAAACTGTCCGATAATGCCGTGTTGCCATCGCGAGCCTCCGCTCTCTCCGCTGGTTACGATCTCTCCAGTGCAAAAGATACGATTATCCCTTCTCGAGGAAGAGGCTTGGTTCCGACTGATTTGAGCATCGCGATTCCGGACGGAACTTACGCTCGAATTGCACCGCGTTCGGGTTTGGCTTTGAAGCATGCGATCGATGTTGGTGCGGGTGTGATAGATGCTGATTACAGAGGTCCCCTGGGAGTAATATTGTTCAATCACTCTGATGCGGATTTCGAGGTGAAGATGGGCGACAGAATCGCTCAACTGATTCTTGAGAAAATTGTGACGCCGGAGGTGCTGGAGGTCGAGGATTTGGATTCCACTCTCCGAGGTGAATCTGGCTTCGGCTCTACAGGTGTTTGAGAAATCTCTAACTACTTAGAAATGGCGGATTTGCAGTTCTTTTTCCCATTTTGCATCGTTTACCGTTGAATACATGATCATCAGACAACGAAAAAGAACTTTCTTCTGTATCTTGCTACTGAAATAAACGAATTACCAAATTTACATCTATTTGCAACTACTAGATGAGATGCCTGCTTAGAAATGGCAGATTTGCAGTTCTTTTTACCATTTTGCATCGTTTATCGTTGAATGCATGATCATCAGACAACGAAAAAGAATTTTCTTCTGTATCTTGCCTACTTCAATAAACGAATTATCAAATTTAC

Coding sequence (CDS)

ATGTCAATAGGTTATCGTGCAGTGAAATGGAGGGAAAATTTGGCGCCATTACCGACGATGCTCTCTAGTCTTCCTCTATTTAAAGCCGTTTCGCCTTCTTCTAACCCCACACAGACCTGCGTCAATTTCAGGTTCAATTCTCATTTCTCCCGAACCCTAACAATGGCGCAGAACTGCCCCTCAGAAGACAATGTATCGTTGCGGTCGCCCAAGGTACCAAAGCTTGCTCATGAGAGCGGTGAGTCTGAAAGATTTAGCTATTCATCGACGCTTCTCAGAGTAAAGAAACTGTCCGATAATGCCGTGTTGCCATCGCGAGCCTCCGCTCTCTCCGCTGGTTACGATCTCTCCAGTGCAAAAGATACGATTATCCCTTCTCGAGGAAGAGGCTTGGTTCCGACTGATTTGAGCATCGCGATTCCGGACGGAACTTACGCTCGAATTGCACCGCGTTCGGGTTTGGCTTTGAAGCATGCGATCGATGTTGGTGCGGGTGTGATAGATGCTGATTACAGAGGTCCCCTGGGAGTAATATTGTTCAATCACTCTGATGCGGATTTCGAGGTGAAGATGGGCGACAGAATCGCTCAACTGATTCTTGAGAAAATTGTGACGCCGGAGGTGCTGGAGGTCGAGGATTTGGATTCCACTCTCCGAGGTGAATCTGGCTTCGGCTCTACAGGTGTTTGA

Homology

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BLAST of CmoCh05G002420.1 vs. Swiss-Prot
Match: DUT_SOLLC (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.9e-60
Identity = 120/175 (68.57%), Postives = 144/175 (82.29%), Query Frame = 1


Query: 55  MAQNCPSEDNVSLRSPKVPKLAHESGESERFSYSSTLLRVKKLSDNAVLPSRASALSAGY 114
           MA+N  +   ++  SPKV KL H    +  F       RVKKLS+NAVLPSRAS+L+AGY
Sbjct: 1   MAENQINSPEITEPSPKVQKLDHPENGNVPF------FRVKKLSENAVLPSRASSLAAGY 60

Query: 115 DLSSAKDTIIPSRGRGLVPTDLSIAIPDGTYARIAPRSGLALKHAIDVGAGVIDADYRGP 174
           DLSSA +T +P+RG+ LVPTDLSIA+P GTYARIAPRSGLA K++IDVGAGVIDADYRGP
Sbjct: 61  DLSSAAETKVPARGKALVPTDLSIAVPQGTYARIAPRSGLAWKYSIDVGAGVIDADYRGP 120

Query: 175 LGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           +GV+LFNHS+ DFEVK+GDRIAQLI++KIVTPEV +V+DLDST+RG  GFGSTGV
Sbjct: 121 VGVVLFNHSEVDFEVKVGDRIAQLIVQKIVTPEVEQVDDLDSTVRGSGGFGSTGV 169

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BLAST of CmoCh05G002420.1 vs. Swiss-Prot
Match: DUT_ORYSJ (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Oryza sativa subsp. japonica GN=DUT PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59
Identity = 112/139 (80.58%), Postives = 129/139 (92.81%), Query Frame = 1


Query: 91  LLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAIPDGTYARIAP 150
           LL+VKKLS+NAVLPSR SAL+AGYDLSSA + ++P+RG+ +VPTDLSIAIP+GTYAR+AP
Sbjct: 33  LLKVKKLSENAVLPSRGSALAAGYDLSSAAEVVVPARGKAMVPTDLSIAIPEGTYARVAP 92

Query: 151 RSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLE 210
           RSGLALKH+IDVGAGVIDADYRGP+GVILFNHSD DF VK GDRIAQ+I+E IVTPEV E
Sbjct: 93  RSGLALKHSIDVGAGVIDADYRGPVGVILFNHSDTDFAVKPGDRIAQMIIEVIVTPEVAE 152

Query: 211 VEDLDSTLRGESGFGSTGV 230
           VEDLD+T+RGE GFGSTGV
Sbjct: 153 VEDLDATVRGEGGFGSTGV 171

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BLAST of CmoCh05G002420.1 vs. Swiss-Prot
Match: DUT_ARATH (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana GN=DUT PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.0e-59
Identity = 115/161 (71.43%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 69  SPKVPKLAHESGESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRG 128
           SPK+ KL       +  S  S   +VKKLS+ AV+P+R S LSAGYDLSSA D+ +P+RG
Sbjct: 8   SPKLQKLDRNGIHGD--SSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARG 67

Query: 129 RGLVPTDLSIAIPDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFE 188
           + L+PTDLSIA+P+GTYARIAPRSGLA KH+IDVGAGVIDADYRGP+GVILFNHSDADFE
Sbjct: 68  KALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDADFE 127

Query: 189 VKMGDRIAQLILEKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           VK GDRIAQLI+EKIVTP+V+EV+DLD T+RG+ GFGSTGV
Sbjct: 128 VKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 166

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BLAST of CmoCh05G002420.1 vs. Swiss-Prot
Match: DUT_NEUCR (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=dut-1 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.3e-48
Identity = 93/138 (67.39%), Postives = 115/138 (83.33%), Query Frame = 1


Query: 92  LRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAIPDGTYARIAPR 151
           L +KKLSD A LP+R SA +AGYD+ ++K+T IP+RG+GLV TD+S+A+P GTY RIAPR
Sbjct: 18  LLIKKLSDKARLPTRGSAFAAGYDIYASKETTIPARGKGLVETDISMAVPAGTYGRIAPR 77

Query: 152 SGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEV 211
           SGLA K+ IDVGAGVIDADYRG + V+LFNHSD DF V  GDR+AQL+LE+I TPEV+EV
Sbjct: 78  SGLAAKNFIDVGAGVIDADYRGQVKVLLFNHSDVDFVVNEGDRVAQLVLERIYTPEVVEV 137

Query: 212 EDLDSTLRGESGFGSTGV 230
           E L+ ++RG  GFGSTGV
Sbjct: 138 EQLEESVRGAGGFGSTGV 155

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BLAST of CmoCh05G002420.1 vs. Swiss-Prot
Match: DUT_DICDI (Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Dictyostelium discoideum GN=dut PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.2e-48
Identity = 92/137 (67.15%), Postives = 112/137 (81.75%), Query Frame = 1


Query: 93  RVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAIPDGTYARIAPRS 152
           +VKKLSD A++P R S  +AGYDLSSA + ++P+ G+ L  TDL IAIPDGTY RIAPRS
Sbjct: 39  KVKKLSDKAIIPQRGSKGAAGYDLSSAHELVVPAHGKALAMTDLQIAIPDGTYGRIAPRS 98

Query: 153 GLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEVE 212
           GLA K+ ID GAGVID+DYRG +GV+LFNHSD DF+V +GDR+AQLI E+IVTPE LEV+
Sbjct: 99  GLAWKNFIDCGAGVIDSDYRGNVGVVLFNHSDVDFKVAVGDRVAQLIFERIVTPEPLEVD 158

Query: 213 DLDSTLRGESGFGSTGV 230
           ++D T RG  GFGSTGV
Sbjct: 159 EIDETQRGAGGFGSTGV 175

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BLAST of CmoCh05G002420.1 vs. TrEMBL
Match: A0A0A0LPA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361570 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.9e-80
Identity = 162/209 (77.51%), Postives = 178/209 (85.17%), Query Frame = 1


Query: 21  LSSLPLFKAVSPSSNPTQTCVNFRFNSHFSRTLTMAQNCPSEDNVSLRSPKVPKLAHESG 80
           LS LPL+      SN     +NFR++SHFS+TLTMAQN  SE  VS+RSPKV KL HE+G
Sbjct: 15  LSRLPLYNPHLSPSNSKSNFINFRYDSHFSQTLTMAQNGTSEVQVSVRSPKVQKLTHENG 74

Query: 81  ESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAI 140
           ESE  + SS  LRVKKLS+ AVLPSRASALSAGYDLSSA +T +P+RG+ LVPTDLSIAI
Sbjct: 75  ESEDVTKSSMRLRVKKLSEKAVLPSRASALSAGYDLSSAIETKVPARGKVLVPTDLSIAI 134

Query: 141 PDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLIL 200
           P GTYARIAPRSGLALKHAIDVGAGVIDADYRGP+GVILFNHSD DFEVK GDRIAQ+IL
Sbjct: 135 PKGTYARIAPRSGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQMIL 194

Query: 201 EKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           EKIVTPEV+EVEDLDSTLRGE GFGSTGV
Sbjct: 195 EKIVTPEVIEVEDLDSTLRGEGGFGSTGV 223

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BLAST of CmoCh05G002420.1 vs. TrEMBL
Match: A0A059BNN1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01560 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-62
Identity = 132/201 (65.67%), Postives = 153/201 (76.12%), Query Frame = 1


Query: 29  AVSPSSNPTQTCVNFRFNSHFSRTLTMAQNCPSEDNVSLRSPKVPKLAHESGESERFSYS 88
           A SP S+P + C+ F       + + M +N P    V    PK+PKL    G        
Sbjct: 33  AASPISSP-RGCLRFHRRRRLLQRVKMVENAPE---VEEPCPKIPKLDQNGGGVGAPKEP 92

Query: 89  STLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAIPDGTYARI 148
            +L RVKKLS+ AVLPSRAS LSAGYDLSSA +  +P+RG+ LVPTDLS+AIP+GTYARI
Sbjct: 93  VSLFRVKKLSEKAVLPSRASPLSAGYDLSSAAEAKVPARGKALVPTDLSVAIPEGTYARI 152

Query: 149 APRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEV 208
           APRSGLA KH+IDVGAGVIDADYRGP+GVILFNHSD DFEVK GDRIAQLI+EKI+TP+V
Sbjct: 153 APRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQLIIEKIMTPDV 212

Query: 209 LEVEDLDSTLRGESGFGSTGV 230
           +EVEDLDSTLRGE GFGSTGV
Sbjct: 213 VEVEDLDSTLRGEGGFGSTGV 229

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BLAST of CmoCh05G002420.1 vs. TrEMBL
Match: A0A061FJT4_THECC (Dutp-pyrophosphatase-like 1 OS=Theobroma cacao GN=TCM_034021 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60
Identity = 130/197 (65.99%), Postives = 154/197 (78.17%), Query Frame = 1


Query: 35  NPTQTCVNFRFNSHFSRTLTMAQNCPSEDNVSLRSP--KVPKLAHESGESERFSYSSTLL 94
           NP   C +F      SR+  MAQ      +  ++ P  KVPKL+ ++G  E      ++L
Sbjct: 10  NPLPVCFSF------SRSFKMAQADQLNTSPEIKEPSTKVPKLS-QNGMHEVSQGVVSVL 69

Query: 95  RVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAIPDGTYARIAPRS 154
           RVKKLS+ AVLPSR S L+AGYDLSSA DT +P+RG+ LVPTDLSIAIP+GTY R+APRS
Sbjct: 70  RVKKLSEKAVLPSRGSPLAAGYDLSSATDTKVPARGKALVPTDLSIAIPEGTYGRVAPRS 129

Query: 155 GLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEVLEVE 214
           GLA KH+IDVGAGVIDADYRGPLGVILFNHSD DFEVK+GDRIAQLI+EKI+TP+VLEV+
Sbjct: 130 GLAWKHSIDVGAGVIDADYRGPLGVILFNHSDVDFEVKVGDRIAQLIVEKIMTPDVLEVD 189

Query: 215 DLDSTLRGESGFGSTGV 230
           DLDST RG+ GFGSTGV
Sbjct: 190 DLDSTARGDGGFGSTGV 199

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BLAST of CmoCh05G002420.1 vs. TrEMBL
Match: A0A067GY38_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027765mg PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60
Identity = 135/226 (59.73%), Postives = 162/226 (71.68%), Query Frame = 1


Query: 5   YRAVKW-RENLAPLPTMLSSLPLFKAVSPSSNPTQTCVNFRFNSHFSRTLTMAQNCPSED 64
           +RA  W R  +A  P    SL +  + +P  + +   V       F     + QN   E 
Sbjct: 6   FRATNWGRLEIAGFPIYKRSLEIASSQNPIRHQSLKLV-------FKMAPAVQQNGSPE- 65

Query: 65  NVSLRSPKVPKLAHESGESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTI 124
            V   SPK+PKL     E++      +LLRVKKLS+ AVLP R S L+AGYDLSSA +T 
Sbjct: 66  -VKEPSPKIPKLHQNGVENDNIG---SLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETK 125

Query: 125 IPSRGRGLVPTDLSIAIPDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHS 184
           +P+RG+ LVPTDLSIAIP+GTYARIAPRSGLA KH++DVGAGVIDADYRGP+GVILFNHS
Sbjct: 126 VPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHS 185

Query: 185 DADFEVKMGDRIAQLILEKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           D DF VK+GDRIAQLI+EKIVTP+VLEVE+LDST+RGE GFGSTGV
Sbjct: 186 DVDFVVKVGDRIAQLIIEKIVTPDVLEVENLDSTVRGEGGFGSTGV 219

[Close]

BLAST of CmoCh05G002420.1 vs. TrEMBL
Match: V4TEY0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002428mg PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.9e-60
Identity = 136/226 (60.18%), Postives = 160/226 (70.80%), Query Frame = 1


Query: 5   YRAVKW-RENLAPLPTMLSSLPLFKAVSPSSNPTQTCVNFRFNSHFSRTLTMAQNCPSED 64
           +RA  W R  +A  P    SL +  + +P    +   V       F       QN   E 
Sbjct: 6   FRATNWGRLEIAGFPIYKRSLEIASSQNPIRYQSLKLV-------FKMAPAGQQNGSPE- 65

Query: 65  NVSLRSPKVPKLAHESGESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTI 124
            V   SPK+PKL     E++      +LLRVKKLS+ AVLP R S L+AGYDLSSA +T 
Sbjct: 66  -VKEPSPKIPKLHQNGVENDNIG---SLLRVKKLSEKAVLPKRGSPLAAGYDLSSAAETK 125

Query: 125 IPSRGRGLVPTDLSIAIPDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHS 184
           +P+RG+ LVPTDLSIAIP+GTYARIAPRSGLA KH++DVGAGVIDADYRGP+GVILFNHS
Sbjct: 126 VPARGKALVPTDLSIAIPEGTYARIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHS 185

Query: 185 DADFEVKMGDRIAQLILEKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           D DFEVK+GDRIAQLI+EKIVTP+VLEVE LDST+RGE GFGSTGV
Sbjct: 186 DVDFEVKVGDRIAQLIIEKIVTPDVLEVESLDSTVRGEGGFGSTGV 219

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BLAST of CmoCh05G002420.1 vs. TAIR10
Match: AT3G46940.1 (AT3G46940.1 DUTP-PYROPHOSPHATASE-LIKE 1)

HSP 1 Score: 228.8 bits (582), Expect = 3.4e-60
Identity = 115/161 (71.43%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 69  SPKVPKLAHESGESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRG 128
           SPK+ KL       +  S  S   +VKKLS+ AV+P+R S LSAGYDLSSA D+ +P+RG
Sbjct: 8   SPKLQKLDRNGIHGD--SSPSPFFKVKKLSEKAVIPTRGSPLSAGYDLSSAVDSKVPARG 67

Query: 129 RGLVPTDLSIAIPDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFE 188
           + L+PTDLSIA+P+GTYARIAPRSGLA KH+IDVGAGVIDADYRGP+GVILFNHSDADFE
Sbjct: 68  KALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDADFE 127

Query: 189 VKMGDRIAQLILEKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           VK GDRIAQLI+EKIVTP+V+EV+DLD T+RG+ GFGSTGV
Sbjct: 128 VKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDGGFGSTGV 166

[Close]

BLAST of CmoCh05G002420.1 vs. NCBI nr
Match: gi|659087920|ref|XP_008444707.1| (PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 3.3e-81
Identity = 164/209 (78.47%), Postives = 179/209 (85.65%), Query Frame = 1


Query: 21  LSSLPLFKAVSPSSNPTQTCVNFRFNSHFSRTLTMAQNCPSEDNVSLRSPKVPKLAHESG 80
           LS LP +K    SSN     +NFRFNS+FS+TL MAQN  SE   SLRSPKV KL H++G
Sbjct: 49  LSRLPRYKPHLSSSNSKSNRINFRFNSYFSQTLKMAQNGTSEVQESLRSPKVQKLTHDNG 108

Query: 81  ESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAI 140
           ESE  S SS LLRVKKLS+ AVLPSRASALSAGYDLSSA +T +P+RG+ LVPTDLSIAI
Sbjct: 109 ESENVSKSSMLLRVKKLSEKAVLPSRASALSAGYDLSSAVETKVPARGKVLVPTDLSIAI 168

Query: 141 PDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLIL 200
           P+GTYARIAPRSGLALKHAIDVGAGVIDADYRGP+GVILFNHSD DFEVK GDRIAQ+IL
Sbjct: 169 PEGTYARIAPRSGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQMIL 228

Query: 201 EKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           EKIVTPEV+EVEDLDSTLRGE GFGSTGV
Sbjct: 229 EKIVTPEVMEVEDLDSTLRGEGGFGSTGV 257

[Close]

BLAST of CmoCh05G002420.1 vs. NCBI nr
Match: gi|449469995|ref|XP_004152704.1| (PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 2.8e-80
Identity = 162/209 (77.51%), Postives = 178/209 (85.17%), Query Frame = 1


Query: 21  LSSLPLFKAVSPSSNPTQTCVNFRFNSHFSRTLTMAQNCPSEDNVSLRSPKVPKLAHESG 80
           LS LPL+      SN     +NFR++SHFS+TLTMAQN  SE  VS+RSPKV KL HE+G
Sbjct: 15  LSRLPLYNPHLSPSNSKSNFINFRYDSHFSQTLTMAQNGTSEVQVSVRSPKVQKLTHENG 74

Query: 81  ESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAI 140
           ESE  + SS  LRVKKLS+ AVLPSRASALSAGYDLSSA +T +P+RG+ LVPTDLSIAI
Sbjct: 75  ESEDVTKSSMRLRVKKLSEKAVLPSRASALSAGYDLSSAIETKVPARGKVLVPTDLSIAI 134

Query: 141 PDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLIL 200
           P GTYARIAPRSGLALKHAIDVGAGVIDADYRGP+GVILFNHSD DFEVK GDRIAQ+IL
Sbjct: 135 PKGTYARIAPRSGLALKHAIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQMIL 194

Query: 201 EKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           EKIVTPEV+EVEDLDSTLRGE GFGSTGV
Sbjct: 195 EKIVTPEVIEVEDLDSTLRGEGGFGSTGV 223

[Close]

BLAST of CmoCh05G002420.1 vs. NCBI nr
Match: gi|1021549483|ref|XP_016166140.1| (PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Arachis ipaensis])

HSP 1 Score: 248.1 bits (632), Expect = 1.5e-62
Identity = 143/221 (64.71%), Postives = 170/221 (76.92%), Query Frame = 1


Query: 21  LSSLPLFKAVSPSSNPTQ----TCVNFRFNSHF--SRTLTMAQ------NCPSEDNVSLR 80
           LS LPL+K  + +S        + +N R+  HF  S  LTMAQ      N  +   +   
Sbjct: 11  LSILPLYKPFASTSYSLSFQSFSLLNQRY-PHFCNSLVLTMAQPDSHATNGSTVAEIQEP 70

Query: 81  SPKVPKLAHESGESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRG 140
           SPK+ K+  ++  S      ++LLRVKKLSDNAVLPSRAS+LSAGYDLSSA +T IP+RG
Sbjct: 71  SPKILKVHQDADISTNL---ASLLRVKKLSDNAVLPSRASSLSAGYDLSSAVETKIPARG 130

Query: 141 RGLVPTDLSIAIPDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFE 200
           + LV TDLSI+IP+GTYARIAPRSGLALKH+IDVGAGVIDADYRGP+GVILFNHSD DFE
Sbjct: 131 KALVATDLSISIPEGTYARIAPRSGLALKHSIDVGAGVIDADYRGPVGVILFNHSDVDFE 190

Query: 201 VKMGDRIAQLILEKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           VK+GDR+AQLILEKIVTP+V+EVEDLDST+RGE GFGSTGV
Sbjct: 191 VKVGDRVAQLILEKIVTPDVVEVEDLDSTVRGEGGFGSTGV 227

[Close]

BLAST of CmoCh05G002420.1 vs. NCBI nr
Match: gi|702367245|ref|XP_010060936.1| (PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Eucalyptus grandis])

HSP 1 Score: 247.7 bits (631), Expect = 2.0e-62
Identity = 132/201 (65.67%), Postives = 153/201 (76.12%), Query Frame = 1


Query: 29  AVSPSSNPTQTCVNFRFNSHFSRTLTMAQNCPSEDNVSLRSPKVPKLAHESGESERFSYS 88
           A SP S+P + C+ F       + + M +N P    V    PK+PKL    G        
Sbjct: 33  AASPISSP-RGCLRFHRRRRLLQRVKMVENAPE---VEEPCPKIPKLDQNGGGVGAPKEP 92

Query: 89  STLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLVPTDLSIAIPDGTYARI 148
            +L RVKKLS+ AVLPSRAS LSAGYDLSSA +  +P+RG+ LVPTDLS+AIP+GTYARI
Sbjct: 93  VSLFRVKKLSEKAVLPSRASPLSAGYDLSSAAEAKVPARGKALVPTDLSVAIPEGTYARI 152

Query: 149 APRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMGDRIAQLILEKIVTPEV 208
           APRSGLA KH+IDVGAGVIDADYRGP+GVILFNHSD DFEVK GDRIAQLI+EKI+TP+V
Sbjct: 153 APRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKAGDRIAQLIIEKIMTPDV 212

Query: 209 LEVEDLDSTLRGESGFGSTGV 230
           +EVEDLDSTLRGE GFGSTGV
Sbjct: 213 VEVEDLDSTLRGEGGFGSTGV 229

[Close]

BLAST of CmoCh05G002420.1 vs. NCBI nr
Match: gi|470111296|ref|XP_004291884.1| (PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Fragaria vesca subsp. vesca])

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-61
Identity = 134/217 (61.75%), Postives = 162/217 (74.65%), Query Frame = 1


Query: 15  APLPTMLSSLPLFKAVSPSSNPTQTC--VNFRFNSHFSRTLTMAQNCPSEDNVSLRSPKV 74
           A +PT  SSL L     P  +P  T   ++ +  +H    L MA+       V   +PK+
Sbjct: 22  AKIPTT-SSLALTSLFKPPQSPHLTLKPLHSKHPNHRRNFLKMAEQQNGSHEVKEPAPKI 81

Query: 75  PKLAHESGESERFSYSSTLLRVKKLSDNAVLPSRASALSAGYDLSSAKDTIIPSRGRGLV 134
            KL H++G+    +Y     RVKKLS+ A+LPSR S LSAGYDLSSA +T IP+RG+ LV
Sbjct: 82  AKL-HQNGDVSETNY----FRVKKLSEKAILPSRGSPLSAGYDLSSATETKIPARGKALV 141

Query: 135 PTDLSIAIPDGTYARIAPRSGLALKHAIDVGAGVIDADYRGPLGVILFNHSDADFEVKMG 194
           PTDLSIA+P GTYAR+APRSGLALKH+IDVGAGVIDADYRGP+GVILFNHSD DFEVK+G
Sbjct: 142 PTDLSIAVPKGTYARVAPRSGLALKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKVG 201

Query: 195 DRIAQLILEKIVTPEVLEVEDLDSTLRGESGFGSTGV 230
           DRIAQLI+EKI+TP+V+EVEDLD T+RGE GFGSTGV
Sbjct: 202 DRIAQLIIEKIITPDVMEVEDLDCTVRGEGGFGSTGV 232

The following BLAST results are available for this feature:

BLAST of CmoCh05G002420.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DUT_SOLLC	1.9e-60	68.57	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Solanum lycopersicum PE=2 SV...	[more]
DUT_ORYSJ	1.2e-59	80.58	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Oryza sativa subsp. japonica...	[more]
DUT_ARATH	6.0e-59	71.43	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Arabidopsis thaliana GN=DUT ...	[more]
DUT_NEUCR	6.3e-48	67.39	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Neurospora crassa (strain AT...	[more]
DUT_DICDI	8.2e-48	67.15	Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Dictyostelium discoideum GN=...	[more]

BLAST of CmoCh05G002420.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPA0_CUCSA	1.9e-80	77.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361570 PE=4 SV=1	[more]
A0A059BNN1_EUCGR	1.4e-62	65.67	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01560 PE=4 SV=1	[more]
A0A061FJT4_THECC	1.3e-60	65.99	Dutp-pyrophosphatase-like 1 OS=Theobroma cacao GN=TCM_034021 PE=4 SV=1	[more]
A0A067GY38_CITSI	2.2e-60	59.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027765mg PE=4 SV=1	[more]
V4TEY0_9ROSI	2.9e-60	60.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002428mg PE=4 SV=1	[more]

BLAST of CmoCh05G002420.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46940.1	3.4e-60	71.43	DUTP-PYROPHOSPHATASE-LIKE 1	[more]

BLAST of CmoCh05G002420.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659087920\|ref\|XP_008444707.1\|	3.3e-81	78.47	PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis melo]	[more]
gi\|449469995\|ref\|XP_004152704.1\|	2.8e-80	77.51	PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Cucumis sativus]	[more]
gi\|1021549483\|ref\|XP_016166140.1\|	1.5e-62	64.71	PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Arachis ipaens...	[more]
gi\|702367245\|ref\|XP_010060936.1\|	2.0e-62	65.67	PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Eucalyptus grandis]	[more]
gi\|470111296\|ref\|XP_004291884.1\|	1.3e-61	61.75	PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Fragaria vesca subs...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008180	Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase
IPR008181	dUTPase_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity
GO:0004170	dUTP diphosphatase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0046080	dUTP metabolic process

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046080	dUTP metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004170	dUTP diphosphatase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005488	binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh05G002420	CmoCh05G002420	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002420.1	CmoCh05G002420.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002420.1.exon.1	CmoCh05G002420.1.exon.1	exon
CmoCh05G002420.1.exon.2	CmoCh05G002420.1.exon.2	exon
CmoCh05G002420.1.exon.3	CmoCh05G002420.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002420.1.five_prime_UTR.1	CmoCh05G002420.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002420.1.CDS.1	CmoCh05G002420.1.CDS.1	CDS
CmoCh05G002420.1.CDS.2	CmoCh05G002420.1.CDS.2	CDS
CmoCh05G002420.1.CDS.3	CmoCh05G002420.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh05G002420.1.three_prime_UTR.1	CmoCh05G002420.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008180	Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase	PFAM	PF00692	dUTPase	coord: 100..228 score: 1.7
IPR008181	Deoxyuridine triphosphate nucleotidohydrolase	TIGRFAMs	TIGR00576	TIGR00576	coord: 93..228 score: 2.6
None	No IPR available	PANTHER	PTHR11241	DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE	coord: 64..229 score: 4.5
None	No IPR available	PANTHER	PTHR11241:SF0	BCDNA.LD08534	coord: 64..229 score: 4.5