CmoCh04G022320.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh04G022320.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr04 : 16680134 .. 16680823 (-)
Sequence length366
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTAATAGGTTGAAGTTCGTATTTCAAGCCATTCTCTTCTGCTGCCTTTGTTCAAGATCTGCTGAGATATTTCAAGTTATCAACATATTGATAAAAAAATGTGTAGAGAAACAAAGTAACGAGGTCACAGATTCTATTTATGTGGAAGGGAGTAATTTATATGACCTAATATGTCAAATGGGTTTAGGTCATAACTAATTCAGTGAGAATGAAGGTGAATTGCTATTTTGTTGACTGCATTGTCTCCAGAGTCGTTTAAATTGGAAAGAGAGGTGCTATTGACTGCTCTTGTGAAGAATATTGTCATTACCTTCAGAAATTGATTAGGGTCGGGGGCTCTGGAGTTCCTTAATTATATTTAATCACATGAAGATGCTAGTTTCACCTGGAGTTGTAAATTTTCAATTGGATTAGTCATCTTGAAGATCTTTTATCAGTTTTGATTGCTTCAACTTTCTGAGTTGTCAATTTCTTTGAGGATTTATAAACTTTGACATGGCTATACCGGTAGAAAATTTCACGTATCAGCTAGGCACTCGAAGCATGCAATTCTTTTCCAAAGAAGACGTTCTTCAAGGAATATCTTGTCTATTTGCCTGCATTGGTTGCAGCTTTATGCCAAGTCGGGATGTAATGGGTTTCATAGTTGTACATTCAATGTATGCAATGCTTTCTGATGAATAG

mRNA sequence

ATGGGGTGTAATAGGTTGAAGTTCGTATTTCAAGCCATTCTCTTCTGCTGCCTTTGTTCAAGATCTGCTGAGATATTTCAAGTTATCAACATATTGATAAAAAAATGTGTAGAGAAACAAAGTAACGAGGTCACAGATTCTATTTATGTGGAAGGGAGTAATTTATATGACCTAATATGTCAAATGGGTTTAGAAAATTTCACGTATCAGCTAGGCACTCGAAGCATGCAATTCTTTTCCAAAGAAGACGTTCTTCAAGGAATATCTTGTCTATTTGCCTGCATTGGTTGCAGCTTTATGCCAAGTCGGGATGTAATGGGTTTCATAGTTGTACATTCAATGTATGCAATGCTTTCTGATGAATAG

Coding sequence (CDS)

ATGGGGTGTAATAGGTTGAAGTTCGTATTTCAAGCCATTCTCTTCTGCTGCCTTTGTTCAAGATCTGCTGAGATATTTCAAGTTATCAACATATTGATAAAAAAATGTGTAGAGAAACAAAGTAACGAGGTCACAGATTCTATTTATGTGGAAGGGAGTAATTTATATGACCTAATATGTCAAATGGGTTTAGAAAATTTCACGTATCAGCTAGGCACTCGAAGCATGCAATTCTTTTCCAAAGAAGACGTTCTTCAAGGAATATCTTGTCTATTTGCCTGCATTGGTTGCAGCTTTATGCCAAGTCGGGATGTAATGGGTTTCATAGTTGTACATTCAATGTATGCAATGCTTTCTGATGAATAG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR015276Cholecystokinin A receptor, N-terminal
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh04G022320CmoCh04G022320gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh04G022320.1CmoCh04G022320.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G022320.1.CDS.2CmoCh04G022320.1.CDS.2CDS
CmoCh04G022320.1.CDS.1CmoCh04G022320.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G022320.1.exon.2CmoCh04G022320.1.exon.2exon
CmoCh04G022320.1.exon.1CmoCh04G022320.1.exon.1exon


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015276Cholecystokinin A receptor, N-terminalGENE3DG3DSA:4.10.670.10coord: 43..68
score: 8.