CmoCh04G014750.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G014750.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Non-symbiotic hemoglobin 2
Location	Cmo_Chr04 : 7543998 .. 7545370 (-)
Sequence length	687

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGAGAGGGGTCCTGAAAGCACCTTATCCTTTGAAATTTGTAGAGATAGAAAGAGAAATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAACAAGGATTTGCCTCTCTACAGCCTTCATTTCTTCACTCAGTAAGTATTTTACCTTTTTTTTTATTTTTTTATTTTTTTATTTAGTTATGGTGTTTCTTTTGTTTATTATTTTTACTGTAATAATGGAAGGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGATTCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGGTGAGTTTTATTTATTTATTTTTTTTTTTAATTTTTCGCACAAATTCATGAGATGAAAATTGAGATTTAGAACGATGTGGCTGTGTGAGTTGGAATGAAATTTTGGACTTGTAATTGTCGCGCCCATCTTGGGTCACAGTTTTGGTCCGAATTCTAATAGATTTCTACTCGAAAGTTAATTTTCAGGTGGAACTATTGTTAGTAAAATTAAAACATAATTTCACAAACGGAGTTTAAGTTTGGTTTCATAACTCCGAACCATATACAAAATCTAAGCTCAACTCAACCAAATGCTTCTTCGATGTAAGATGATTAATGTTGAAACCACTAAATTAAATTTTTGGTGATGCAAACATTTGAAGTGAGTTGAAATGTTGTTGGATTGTAAACTAAAAGAAAAAGATGAAAAAATTGCAGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTAACCTTTCAAATCACTTAATTTTGTATAATTTTTTTTAAAAAATGGGTCACTCAAAATCTAAATTTAAAAATTTAAGGACCTATTAGATAATTATTTAAAGTTTAGGAACCGAACAACTCTAATTTCAATAATTGAATGGTGACTGAATCTAAAAAATGTAATGTCGAGACATTTAGGTGGTGAAAGAGGCATTGCTGCGCACGGTGAAGAAAGGAATGGGAGAGCAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGGGCTTACGACCAATTGGCTTCAGCAATCAAAGCTGAAATGAAATAATAATAATAATAATAATAATAAAAAAGACTATTTCAGCTGAGTTTTGAATTTGCTTTATTTGTTTTGGCGATATTGGCAATGAGGCTCAAAACTCATAATCTTGTGTCTTTTTAATTATACTTGCTGCCATTTCATTCCATTGGAATTGTCATATTTGAACTGTTGATTGCAT

mRNA sequence

TGGAGAGAGGGGTCCTGAAAGCACCTTATCCTTTGAAATTTGTAGAGATAGAAAGAGAAATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAACAAGGATTTGCCTCTCTACAGCCTTCATTTCTTCACTCAGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGATTCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTGGTGAAAGAGGCATTGCTGCGCACGGTGAAGAAAGGAATGGGAGAGCAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGGGCTTACGACCAATTGGCTTCAGCAATCAAAGCTGAAATGAAATAATAATAATAATAATAATAATAAAAAAGACTATTTCAGCTGAGTTTTGAATTTGCTTTATTTGTTTTGGCGATATTGGCAATGAGGCTCAAAACTCATAATCTTGTGTCTTTTTAATTATACTTGCTGCCATTTCATTCCATTGGAATTGTCATATTTGAACTGTTGATTGCAT

Coding sequence (CDS)

ATGGAATTCACAGAGAAGGAAGAAGGTTTGGTGAAGGAATCATGGGATGTTTTGAACAAGGATTTGCCTCTCTACAGCCTTCATTTCTTCACTCAGATATTGGAGATAGCTCCAGCAGCAAAGGGCATGTTTTCTTTCTTAAGGGATTCTGAACAGATTCCTCAGAACAATCCTAAGCTTAAGGCTCATGCACTCAAGGTTTTCAAGATGACATGTGAAGCAGCCATTCAGCTGCGAGAGAAGGGGGAAGTGGTGGTCTCTGAGACTACCCTACAATATTTGGGCTCTGTCCACCTTCGTAATGGAGTCATTGATCCACATTTTGAGGTGGTGAAAGAGGCATTGCTGCGCACGGTGAAGAAAGGAATGGGAGAGCAATGGAGCGAGGAAATGGGCAATGCCTGGACCCGGGCTTACGACCAATTGGCTTCAGCAATCAAAGCTGAAATGAAATAA

Homology

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BLAST of CmoCh04G014750.1 vs. Swiss-Prot
Match: HBL2_ARATH (Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana GN=AHB2 PE=1 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.6e-63
Identity = 112/149 (75.17%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLRE+G+VVV++TTLQYLGS+HL++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW++AYD LA AIK EMK
Sbjct: 126 LGEKYNEEVEGAWSQAYDHLALAIKTEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. Swiss-Prot
Match: HBL2_BRANA (Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB2 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.7e-63
Identity = 111/149 (74.50%), Postives = 138/149 (92.62%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAK MFSFLRD++++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLREKG+VVV++TTLQYLGSVH ++GV+DPHFEVVKEAL+RT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHFKSGVLDPHFEVVKEALVRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW++AYD LA AIKAEMK
Sbjct: 126 LGEKYNEEVEGAWSKAYDHLALAIKAEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. Swiss-Prot
Match: HBL2_GOSHI (Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum GN=HB2 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-61
Identity = 115/152 (75.66%), Postives = 137/152 (90.13%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           M FTEK+EGLVKESW+VL +D+P  SL FF+ ILEIAP AK MFSFLR+SE+IPQNNPKL
Sbjct: 1   MGFTEKQEGLVKESWEVLKQDIPHSSLRFFSLILEIAPGAKNMFSFLRESEEIPQNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA+KVFKMTCE+AIQLREKGEVVV++TTL+YLG+VH+++GV DPHFEVVKEALLRT++
Sbjct: 61  KAHAVKVFKMTCESAIQLREKGEVVVADTTLKYLGTVHVKSGVKDPHFEVVKEALLRTIE 120

Query: 121 KGMGEQ-WSEEMGNAWTRAYDQLASAIKAEMK 152
           + +GE+ W+EEM NAW  AYDQLA AIKAEMK
Sbjct: 121 EAIGEEKWNEEMKNAWGEAYDQLAEAIKAEMK 152

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BLAST of CmoCh04G014750.1 vs. Swiss-Prot
Match: HBL2_SOLLC (Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum GN=HB2 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.7e-58
Identity = 105/150 (70.00%), Postives = 129/150 (86.00%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           M FT+K+E LV++SW+ + +D+P  SL FF+ ILEIAP AK MFSFL+DS+++P+NNPKL
Sbjct: 1   MGFTDKQEALVRDSWEFMKQDIPQLSLRFFSLILEIAPVAKNMFSFLKDSDELPENNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           +AHA+KVFKMTCE+AIQLREKGEVVV ETTL+YLGS+HL+  V DPHFEVVKEALLRTVK
Sbjct: 61  RAHAVKVFKMTCESAIQLREKGEVVVGETTLKYLGSIHLQKRVADPHFEVVKEALLRTVK 120

Query: 121 KGMGEQWSEEMGNAWTRAYDQLASAIKAEM 151
           +  G +W +EM  AW+ AYDQLASAIKAEM
Sbjct: 121 EATGNKWKDEMKEAWSEAYDQLASAIKAEM 150

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BLAST of CmoCh04G014750.1 vs. Swiss-Prot
Match: HBP1_CASGL (Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 6.0e-47
Identity = 86/151 (56.95%), Postives = 115/151 (76.16%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           M  TEK+E L+K+SW+VL +++P +SL  F  I+E AP +K +FSFL+DS +IP+NNPKL
Sbjct: 1   MALTEKQEALLKQSWEVLKQNIPAHSLRLFALIIEAAPESKYVFSFLKDSNEIPENNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA  +FK  CE+A +LR+KG  V    TL+ LGS+HL+N + DPHFEV+K ALL T+K
Sbjct: 61  KAHAAVIFKTICESATELRQKGHAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIK 120

Query: 121 KGMGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           + + E WS+EMG AWT AY+QL + IKAEMK
Sbjct: 121 EAIKENWSDEMGQAWTEAYNQLVATIKAEMK 151

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BLAST of CmoCh04G014750.1 vs. TrEMBL
Match: A0A0A0KTH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G621920 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.4e-71
Identity = 134/151 (88.74%), Postives = 145/151 (96.03%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           M+FTEKEE LVKES++VL KD+P YSLHFFTQILEIAPAAK MFSFLRDSE+IPQNNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDMPFYSLHFFTQILEIAPAAKAMFSFLRDSEEIPQNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQL+EKGEV++SETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIISETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

Query: 121 KGMGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GMGE+WSEEMGNAWT+AY  LASAIKAEMK
Sbjct: 121 EGMGEKWSEEMGNAWTKAYHHLASAIKAEMK 151

[Close]

BLAST of CmoCh04G014750.1 vs. TrEMBL
Match: A0A087H8I9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G113800 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 9.2e-63
Identity = 114/151 (75.50%), Postives = 142/151 (94.04%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           +EFTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++P NNPKL
Sbjct: 4   IEFTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKL 63

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA+KVFKMTCE AIQLREKG+VVV++TTLQYLGS+HL++GVIDPHFEVVKEAL+RT+K
Sbjct: 64  KAHAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALVRTLK 123

Query: 121 KGMGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +G+GE+++EE+  AW++AYD LA AIKAEMK
Sbjct: 124 EGLGEKYNEEVEGAWSQAYDHLALAIKAEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. TrEMBL
Match: R0G7M0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014815mg PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-61
Identity = 113/149 (75.84%), Postives = 138/149 (92.62%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++PQNNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPQNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLREKG+VVV++TTLQYLGS+H ++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSIHRKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW+ AYD LA AIK EMK
Sbjct: 126 LGERYNEEVEGAWSEAYDHLAIAIKTEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. TrEMBL
Match: Q0IGL1_ARATH (At3g10520 OS=Arabidopsis thaliana GN=At3g10520 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-61
Identity = 112/149 (75.17%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLRE+G+VVV++TTLQYLGS+HL++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW++AYD LA AIK EMK
Sbjct: 126 LGEKYNEEVEGAWSQAYDHLALAIKTEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. TrEMBL
Match: M4EZ79_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.0e-61
Identity = 112/149 (75.17%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAK MFSFLRD++++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKDMFSFLRDTDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLREKG+VVV++TTLQYLGSVHL++GV+DPHFEVVKEAL+RT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSVHLKSGVLDPHFEVVKEALVRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW++AYD LA AIKAEMK
Sbjct: 126 LGEKYNEEVEGAWSKAYDHLALAIKAEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. TAIR10
Match: AT3G10520.1 (AT3G10520.1 haemoglobin 2)

HSP 1 Score: 243.4 bits (620), Expect = 8.8e-65
Identity = 112/149 (75.17%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLRE+G+VVV++TTLQYLGS+HL++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW++AYD LA AIK EMK
Sbjct: 126 LGEKYNEEVEGAWSQAYDHLALAIKTEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. TAIR10
Match: AT2G16060.1 (AT2G16060.1 hemoglobin 1)

HSP 1 Score: 164.5 bits (415), Expect = 5.2e-41
Identity = 82/148 (55.41%), Postives = 103/148 (69.59%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTE++E LV +SW V+ K+     L  F +I EIAP  K MFSFLRDS    + NPKLK 
Sbjct: 9   FTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQNPKLKP 68

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+ VF M CE+A+QLR+ G+V V ETTL+ LG+ H + GV+D HFEV K ALL T+K+ 
Sbjct: 69  HAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKEA 128

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEM 151
           + E WS EM  AW +AYD L +AIKAEM
Sbjct: 129 VPEMWSPEMKVAWGQAYDHLVAAIKAEM 156

[Close]

BLAST of CmoCh04G014750.1 vs. NCBI nr
Match: gi|449449389|ref|XP_004142447.1| (PREDICTED: non-symbiotic hemoglobin 2 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 2.0e-71
Identity = 134/151 (88.74%), Postives = 145/151 (96.03%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           M+FTEKEE LVKES++VL KD+P YSLHFFTQILEIAPAAK MFSFLRDSE+IPQNNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDMPFYSLHFFTQILEIAPAAKAMFSFLRDSEEIPQNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQL+EKGEV++SETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIISETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

Query: 121 KGMGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GMGE+WSEEMGNAWT+AY  LASAIKAEMK
Sbjct: 121 EGMGEKWSEEMGNAWTKAYHHLASAIKAEMK 151

[Close]

BLAST of CmoCh04G014750.1 vs. NCBI nr
Match: gi|659091914|ref|XP_008446801.1| (PREDICTED: non-symbiotic hemoglobin 2 [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 3.5e-71
Identity = 135/151 (89.40%), Postives = 144/151 (95.36%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           M+FTEKEE LVKES++VL KDLP YSLHFFTQILEIAPAAKGMFSFLRDSE IP NNPKL
Sbjct: 1   MDFTEKEESLVKESYEVLKKDLPFYSLHFFTQILEIAPAAKGMFSFLRDSEDIPHNNPKL 60

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHALKVFKMTCEAAIQL+EKGEV+VSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK
Sbjct: 61  KAHALKVFKMTCEAAIQLKEKGEVIVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120

Query: 121 KGMGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +G+GE+WSEEMGNAWT+AY  LASAIKAEMK
Sbjct: 121 EGVGEKWSEEMGNAWTKAYHHLASAIKAEMK 151

[Close]

BLAST of CmoCh04G014750.1 vs. NCBI nr
Match: gi|674245676|gb|KFK38441.1| (hypothetical protein AALP_AA3G113800 [Arabis alpina])

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-62
Identity = 114/151 (75.50%), Postives = 142/151 (94.04%), Query Frame = 1


Query: 1   MEFTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKL 60
           +EFTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++P NNPKL
Sbjct: 4   IEFTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKL 63

Query: 61  KAHALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVK 120
           KAHA+KVFKMTCE AIQLREKG+VVV++TTLQYLGS+HL++GVIDPHFEVVKEAL+RT+K
Sbjct: 64  KAHAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALVRTLK 123

Query: 121 KGMGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +G+GE+++EE+  AW++AYD LA AIKAEMK
Sbjct: 124 EGLGEKYNEEVEGAWSQAYDHLALAIKAEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. NCBI nr
Match: gi|565482158|ref|XP_006298719.1| (hypothetical protein CARUB_v10014815mg [Capsella rubella])

HSP 1 Score: 244.2 bits (622), Expect = 1.5e-61
Identity = 113/149 (75.84%), Postives = 138/149 (92.62%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++PQNNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPQNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLREKG+VVV++TTLQYLGS+H ++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREKGKVVVADTTLQYLGSIHRKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW+ AYD LA AIK EMK
Sbjct: 126 LGERYNEEVEGAWSEAYDHLAIAIKTEMK 154

[Close]

BLAST of CmoCh04G014750.1 vs. NCBI nr
Match: gi|15228313|ref|NP_187663.1| (non-symbiotic hemoglobin 2 [Arabidopsis thaliana])

HSP 1 Score: 243.4 bits (620), Expect = 2.5e-61
Identity = 112/149 (75.17%), Postives = 139/149 (93.29%), Query Frame = 1


Query: 3   FTEKEEGLVKESWDVLNKDLPLYSLHFFTQILEIAPAAKGMFSFLRDSEQIPQNNPKLKA 62
           FTEK+E LVKESW++L +D+P YSLHFF+QILEIAPAAKG+FSFLRDS+++P NNPKLKA
Sbjct: 6   FTEKQEALVKESWEILKQDIPKYSLHFFSQILEIAPAAKGLFSFLRDSDEVPHNNPKLKA 65

Query: 63  HALKVFKMTCEAAIQLREKGEVVVSETTLQYLGSVHLRNGVIDPHFEVVKEALLRTVKKG 122
           HA+KVFKMTCE AIQLRE+G+VVV++TTLQYLGS+HL++GVIDPHFEVVKEALLRT+K+G
Sbjct: 66  HAVKVFKMTCETAIQLREEGKVVVADTTLQYLGSIHLKSGVIDPHFEVVKEALLRTLKEG 125

Query: 123 MGEQWSEEMGNAWTRAYDQLASAIKAEMK 152
           +GE+++EE+  AW++AYD LA AIK EMK
Sbjct: 126 LGEKYNEEVEGAWSQAYDHLALAIKTEMK 154

The following BLAST results are available for this feature:

BLAST of CmoCh04G014750.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HBL2_ARATH	1.6e-63	75.17	Non-symbiotic hemoglobin 2 OS=Arabidopsis thaliana GN=AHB2 PE=1 SV=1	[more]
HBL2_BRANA	7.7e-63	74.50	Non-symbiotic hemoglobin 2 OS=Brassica napus GN=HB2 PE=3 SV=1	[more]
HBL2_GOSHI	1.9e-61	75.66	Non-symbiotic hemoglobin 2 OS=Gossypium hirsutum GN=HB2 PE=3 SV=1	[more]
HBL2_SOLLC	5.7e-58	70.00	Non-symbiotic hemoglobin 2 OS=Solanum lycopersicum GN=HB2 PE=2 SV=1	[more]
HBP1_CASGL	6.0e-47	56.95	Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2	[more]

BLAST of CmoCh04G014750.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTH6_CUCSA	1.4e-71	88.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G621920 PE=3 SV=1	[more]
A0A087H8I9_ARAAL	9.2e-63	75.50	Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G113800 PE=3 SV=1	[more]
R0G7M0_9BRAS	1.0e-61	75.84	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014815mg PE=3 SV=1	[more]
Q0IGL1_ARATH	1.7e-61	75.17	At3g10520 OS=Arabidopsis thaliana GN=At3g10520 PE=2 SV=1	[more]
M4EZ79_BRARP	3.0e-61	75.17	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1	[more]

BLAST of CmoCh04G014750.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10520.1	8.8e-65	75.17	haemoglobin 2	[more]
AT2G16060.1	5.2e-41	55.41	hemoglobin 1	[more]

BLAST of CmoCh04G014750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449389\|ref\|XP_004142447.1\|	2.0e-71	88.74	PREDICTED: non-symbiotic hemoglobin 2 [Cucumis sativus]	[more]
gi\|659091914\|ref\|XP_008446801.1\|	3.5e-71	89.40	PREDICTED: non-symbiotic hemoglobin 2 [Cucumis melo]	[more]
gi\|674245676\|gb\|KFK38441.1\|	1.3e-62	75.50	hypothetical protein AALP_AA3G113800 [Arabis alpina]	[more]
gi\|565482158\|ref\|XP_006298719.1\|	1.5e-61	75.84	hypothetical protein CARUB_v10014815mg [Capsella rubella]	[more]
gi\|15228313\|ref\|NP_187663.1\|	2.5e-61	75.17	non-symbiotic hemoglobin 2 [Arabidopsis thaliana]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000971	Globin
IPR001032	Leghaemoglobin
IPR009050	Globin-like_sf
IPR012292	Globin/Proto
IPR019824	Leghaemoglobin_Fe_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0019825	oxygen binding
GO:0020037	heme binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006631	fatty acid metabolic process
biological_process	GO:0015671	oxygen transport
biological_process	GO:0019432	triglyceride biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0020037	heme binding
molecular_function	GO:0019825	oxygen binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0005344	oxygen transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G014750	CmoCh04G014750	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G014750.1	CmoCh04G014750.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G014750.1.three_prime_UTR.1	CmoCh04G014750.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G014750.1.CDS.4	CmoCh04G014750.1.CDS.4	CDS
CmoCh04G014750.1.CDS.3	CmoCh04G014750.1.CDS.3	CDS
CmoCh04G014750.1.CDS.2	CmoCh04G014750.1.CDS.2	CDS
CmoCh04G014750.1.CDS.1	CmoCh04G014750.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G014750.1.five_prime_UTR.1	CmoCh04G014750.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G014750.1.exon.4	CmoCh04G014750.1.exon.4	exon
CmoCh04G014750.1.exon.3	CmoCh04G014750.1.exon.3	exon
CmoCh04G014750.1.exon.2	CmoCh04G014750.1.exon.2	exon
CmoCh04G014750.1.exon.1	CmoCh04G014750.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000971	Globin	PFAM	PF00042	Globin	coord: 9..116 score: 4.7
IPR000971	Globin	PROFILE	PS01033	GLOBIN	coord: 3..151 score: 31
IPR001032	Leghaemoglobin	PRINTS	PR00188	PLANTGLOBIN	coord: 4..21 score: 2.0E-41coord: 29..49 score: 2.0E-41coord: 57..85 score: 2.0E-41coord: 122..148 score: 2.0
IPR009050	Globin-like	unknown	SSF46458	Globin-like	coord: 1..151 score: 5.11
IPR012292	Globin/Protoglobin	GENE3D	G3DSA:1.10.490.10		coord: 3..150 score: 2.3
IPR019824	Leghaemoglobin, iron-binding site	PROSITE	PS00208	PLANT_GLOBIN	coord: 57..68 scor
None	No IPR available	PANTHER	PTHR22924	LEGHEMOGLOBIN-RELATED	coord: 1..151 score: 7.3
None	No IPR available	PANTHER	PTHR22924:SF39	NON-SYMBIOTIC HEMOGLOBIN 2	coord: 1..151 score: 7.3