CmoCh04G012810.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G012810.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DUF674 family protein
Location	Cmo_Chr04 : 6495374 .. 6495958 (-)
Sequence length	585

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTCAAAACCAAACTGAAATCCTCGTGCGTTTTAAGCTTGTGATAGACAAAAAGAGGAAGAAAATCCTATATGCTGAAGCCGACAAGAACTTCTTCGGCGTCATCTTCGCCATACTTCGACTTCCTGTTGAAGATGTCGTCAAGCTGCTCTCCACCGGCCAAGACAGCCCCATGGTTGGTTCACTTGGAAGTCTCTACCGCAGCTTGGAGGCCTTGAACATTACATATTATAACCAAACGCAGTTAAATGCCGACCTCCCAACGCCCATTACTCAATCCCAGATCCTAAGACTCTTGCAAAACTATCCTTCTTCAGGACCAAAGACCTATTATACATGTTCTAATACTACTCACTGTTGTTATAGTTTTAGTGCTACATATAATATTCAATGTCCCAAATGCCACTGTAAGATGGCTAGCCCTGCATCATATGTGTACGAACCTAATGAGGCACGACCCATTGTGGGAGATTTTTTGAAAGGGGGGACTGTTACGTACATTGTGATGGATGATCTTACTGTTAAACCATTGCCCTCTTCCACTATCTCCTTGTCAAGGAATGCAACATTCTCTGCTTAA

mRNA sequence

ATGTCTACTCAAAACCAAACTGAAATCCTCGTGCGTTTTAAGCTTGTGATAGACAAAAAGAGGAAGAAAATCCTATATGCTGAAGCCGACAAGAACTTCTTCGGCGTCATCTTCGCCATACTTCGACTTCCTGTTGAAGATGTCGTCAAGCTGCTCTCCACCGGCCAAGACAGCCCCATGGTTGGTTCACTTGGAAGTCTCTACCGCAGCTTGGAGGCCTTGAACATTACATATTATAACCAAACGCAGTTAAATGCCGACCTCCCAACGCCCATTACTCAATCCCAGATCCTAAGACTCTTGCAAAACTATCCTTCTTCAGGACCAAAGACCTATTATACATGTTCTAATACTACTCACTGTTGTTATAGTTTTAGTGCTACATATAATATTCAATGTCCCAAATGCCACTGTAAGATGGCTAGCCCTGCATCATATGTGTACGAACCTAATGAGGCACGACCCATTGTGGGAGATTTTTTGAAAGGGGGGACTGTTACGTACATTGTGATGGATGATCTTACTGTTAAACCATTGCCCTCTTCCACTATCTCCTTGTCAAGGAATGCAACATTCTCTGCTTAA

Coding sequence (CDS)

ATGTCTACTCAAAACCAAACTGAAATCCTCGTGCGTTTTAAGCTTGTGATAGACAAAAAGAGGAAGAAAATCCTATATGCTGAAGCCGACAAGAACTTCTTCGGCGTCATCTTCGCCATACTTCGACTTCCTGTTGAAGATGTCGTCAAGCTGCTCTCCACCGGCCAAGACAGCCCCATGGTTGGTTCACTTGGAAGTCTCTACCGCAGCTTGGAGGCCTTGAACATTACATATTATAACCAAACGCAGTTAAATGCCGACCTCCCAACGCCCATTACTCAATCCCAGATCCTAAGACTCTTGCAAAACTATCCTTCTTCAGGACCAAAGACCTATTATACATGTTCTAATACTACTCACTGTTGTTATAGTTTTAGTGCTACATATAATATTCAATGTCCCAAATGCCACTGTAAGATGGCTAGCCCTGCATCATATGTGTACGAACCTAATGAGGCACGACCCATTGTGGGAGATTTTTTGAAAGGGGGGACTGTTACGTACATTGTGATGGATGATCTTACTGTTAAACCATTGCCCTCTTCCACTATCTCCTTGTCAAGGAATGCAACATTCTCTGCTTAA

Homology

[Close]

BLAST of CmoCh04G012810.1 vs. TrEMBL
Match: A0A0A0KQ74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180310 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-26
Identity = 81/187 (43.32%), Postives = 109/187 (58.29%), Query Frame = 1


Query: 6   QTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDS-----PM 65
           QTE+ +  KL+ID K+K+ILYAEAD  F   +F+IL LP+  V+KLLST   S     PM
Sbjct: 54  QTEV-INLKLMIDNKQKRILYAEADNKFVDFLFSILSLPIGTVLKLLSTAPSSPTIVTPM 113

Query: 66  VGSLGSLYRSLEALNITYYNQTQLNADLPTPITQSQILRLLQNYPSSGPKTYYTCSNTTH 125
           +GSL SLYRS  ++   Y+   +    L  P   S++  LL +  S+    Y+TCS+   
Sbjct: 114 IGSLSSLYRSANSMKTNYFESNRKKESLLNPHLPSKLKYLLGSSSSASEPKYFTCSS--- 173

Query: 126 CCYSFSATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGGTVTYIVMDDLTVKPLP 185
           C  SFS  Y  +C KC   M + A YV+       +VG    GG VTY+VMDDLTVKP+ 
Sbjct: 174 CPDSFSNGYFARCTKCSEIMTTEALYVHYDLGDGYVVG---AGGMVTYMVMDDLTVKPIT 233

Query: 186 SSTISLS 188
           SS  ++S
Sbjct: 234 SSMSTIS 233

[Close]

BLAST of CmoCh04G012810.1 vs. TrEMBL
Match: M5X812_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010643mg PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.6e-21
Identity = 78/190 (41.05%), Postives = 107/190 (56.32%), Query Frame = 1


Query: 2   STQNQTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSPMV 61
           ++ N     V  KL++D  R K+L+AEA K+    +F +L LPV  V++LLS      MV
Sbjct: 9   NSSNTNTTSVSMKLLVDSTRGKVLFAEASKDVVDFLFTLLSLPVGTVIRLLS---KDGMV 68

Query: 62  GSLGSLYRSLEALNITYYNQTQLNADL----PTPITQSQILRLLQNYPSSGPKTYYTCSN 121
           GSLG LY S+E L+ TY  Q  LN ++       +  + IL LL N   S  K +Y CS 
Sbjct: 69  GSLGKLYESVENLDDTYL-QPNLNKNMLLEPKATVAGANILPLLTNDVDSNAKKFYMCSY 128

Query: 122 TTHCCYSFSATYNIQCPKC-HCKMASPASYVY-EPNEARPIVGDFLKGGTVTYIVMDDLT 181
            ++   S S  +  +CP C H  M++  +YV   P  ARP  G ++K G VTY+VMDDL 
Sbjct: 129 CSN--RSISNVHGTRCPDCNHGHMSNEVTYVSPAPTVARPSEGGYVK-GVVTYMVMDDLE 188

Query: 182 VKPLPSSTIS 186
           VKP+  STIS
Sbjct: 189 VKPM--STIS 189

[Close]

BLAST of CmoCh04G012810.1 vs. TrEMBL
Match: A0A0D2RSN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G248100 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19
Identity = 74/190 (38.95%), Postives = 99/190 (52.11%), Query Frame = 1


Query: 7   TEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSPMVGSLGS 66
           T   +  KL+ID K +++LYAEA K+F   +F IL LPV  V++LL+      MVG L +
Sbjct: 3   TSTTITLKLLIDTKGQRVLYAEAGKDFVDFLFNILILPVGTVIRLLA---KEGMVGCLAN 62

Query: 67  LYRSLEALNITYYNQTQLNADLPTPITQSQIL----RLLQNYPSSGPKTYYTCSN---TT 126
           LY S+E L  TY+  T     L  P   S +     RLL N      ++ Y C N    +
Sbjct: 63  LYESVENLGDTYFQPTTNKDTLLKPNYSSSLATNFPRLLPNIQYKTTQSIYRCPNYNYGS 122

Query: 127 HCCYSFSATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKG----GTVTYIVMDDLT 186
           HC   ++     +CP C   M SPAS+V  PN+      D  +G    G VTY +MDDLT
Sbjct: 123 HCRKYYANDPTSKCPSCTNAMNSPASFVNPPNKVSTASSDANEGGYVKGVVTYTIMDDLT 182

[Close]

BLAST of CmoCh04G012810.1 vs. TrEMBL
Match: A0A0A0KLL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180325 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-19
Identity = 73/182 (40.11%), Postives = 99/182 (54.40%), Query Frame = 1


Query: 11  VRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSPMVGSLGSLYRS 70
           V+ KL+ID K K++L+ EADKN    +F +L LP+  V++LL       M GSL +LY S
Sbjct: 8   VKLKLLIDSKEKRVLFGEADKNMIDFLFNLLSLPLGTVIRLLK----KDMAGSLANLYGS 67

Query: 71  LEALNITYYNQTQLNADLPTP-ITQSQILRLLQNYPS-SGPKTYYTCSNTTHCCYSFSAT 130
           +EALN TY    Q    L  P ++ S    LL N  S +  K  Y C N   C Y+ ++ 
Sbjct: 68  VEALNDTYLQPNQSKDSLLKPKVSFSASTLLLPNIESFADQKKLYLCGN--KCGYNVASN 127

Query: 131 YNIQCPKCHCKMASPASYVYEPN---EARPIVGDF--LKGGTVTYIVMDDLTVKPLPSST 186
               CP C   M+    +V  P+   +A   VG+F     G VTY+VMDDL+VKP+  ST
Sbjct: 128 PTAVCPNCRSAMSRECGFVNPPSANAQATQDVGEFGGFVKGVVTYMVMDDLSVKPM--ST 181

[Close]

BLAST of CmoCh04G012810.1 vs. TrEMBL
Match: M5XSD3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023150mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.6e-19
Identity = 74/192 (38.54%), Postives = 102/192 (53.12%), Query Frame = 1


Query: 1   MSTQNQTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSPM 60
           M+T N T   V  KL+ID K  K+L+AEADK+    +F +L LPV  V++LLS      M
Sbjct: 1   MATSNTTS--VSLKLLIDTKGGKVLFAEADKDVVDFLFTLLSLPVGTVIRLLS---KDAM 60

Query: 61  VGSLGSLYRSLEALNITYYNQTQLNADLPTP---ITQSQILRLLQNYPSSGPKTYYTCSN 120
           VG+LG LY S+E ++ TY     +   L  P   +  S IL LL N   S  K +Y C+N
Sbjct: 61  VGTLGKLYESVENISYTYLQPNLIKDTLLKPKAAVAVSNILLLLTNNVDSNAKQFYICAN 120

Query: 121 TTHCCYSFSATYNIQCPKCHCKMASPASYVYEPNEARPIV----GDFLKGGTVTYIVMDD 180
              C   FS      CP C   M++  +YV     +        G ++K G VTY++MD+
Sbjct: 121 ---CNRRFSDVSGTVCPSCRYAMSTQMTYVCPQASSTAAATSGEGGYVK-GVVTYMIMDN 180

Query: 181 LTVKPLPSSTIS 186
           L V+P+  STIS
Sbjct: 181 LEVRPM--STIS 181

[Close]

BLAST of CmoCh04G012810.1 vs. TAIR10
Match: AT5G01130.1 (AT5G01130.1 Protein of unknown function (DUF674))

HSP 1 Score: 55.1 bits (131), Expect = 5.7e-08
Identity = 44/177 (24.86%), Postives = 78/177 (44.07%), Query Frame = 1


Query: 4   QNQTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSP--MV 63
           ++  E  V  +L ID+++ K++ AEA K F  V+F++L LP+  +++LL   ++S    V
Sbjct: 3   ESSEEPKVSLRLFIDEEKNKVVLAEASKAFVDVLFSLLTLPMGTIIRLLEEHRESQPITV 62

Query: 64  GSLGSLYRSLEALNITYYNQTQLNADL--PTPITQSQILRLLQNYPSSGPKTYYTCSNTT 123
           G   +LYRS+  + I  +        L  P  +   Q  RL+ N   +  K +       
Sbjct: 63  GCFSNLYRSVAEMGIDNFKTDVCKHILLHPRSVRDLQYKRLMLNINPTEVKLF------- 122

Query: 124 HCCYSFSATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGGTVTYIVMDDLTV 177
            C  S +   +    +C C   S  +  ++     P+           +I+ DDL V
Sbjct: 123 KCPISCNFYSHFSTSRCQC--GSSMNKEFQEPRVVPVASSIQNDVNGVFIITDDLKV 170

[Close]

BLAST of CmoCh04G012810.1 vs. TAIR10
Match: AT3G09140.1 (AT3G09140.1 Protein of unknown function (DUF674))

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 35/127 (27.56%), Postives = 61/127 (48.03%), Query Frame = 1


Query: 14  KLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSPMV--GSLGSLYRSL 73
           +L+ID+ + K++ AE+ K+F  V+F+ L LP+  +V+LL   Q SP V  G   +LY+S+
Sbjct: 13  RLLIDELKNKVVLAESGKDFVDVLFSFLALPMGTIVRLLEKHQKSPQVGIGCFNNLYKSV 72

Query: 74  EALNITYYNQTQLNADL--PTPITQSQILRLLQNYPSSGPKTYYTCSNTTHCC---YSFS 133
             +++  +        L  P  +   +   +      +    Y+ CS     C   YS S
Sbjct: 73  SEMDLESFQTEACKQVLLYPRSVNLEKFRNMKLKIDDTRAVKYFVCSGFKESCRHHYSIS 132

[Close]

BLAST of CmoCh04G012810.1 vs. TAIR10
Match: AT3G09110.1 (AT3G09110.1 Protein of unknown function (DUF674))

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07
Identity = 42/169 (24.85%), Postives = 79/169 (46.75%), Query Frame = 1


Query: 14  KLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQD--SPMVGSLGSLYRSL 73
           +L+ID+++ +++ AEA K+F  V+ ++L LP+  +V+LL   Q+  S +VG L +LY+S+
Sbjct: 13  RLLIDEEKNRVILAEAGKDFVDVLCSLLTLPMGTIVRLLEKHQNPQSSVVGCLHNLYKSV 72

Query: 74  EALNITYYNQTQLNADL--PTPITQSQILRLLQNYPSSGPKTYYTCSN--TTHCCYSFSA 133
             +++  +        L  P     S    L  N   +    ++ C N  +T  C    +
Sbjct: 73  ADMDVDNFESQACKHFLLHPRSAKGSHGRDLKLNIDDTEATKFFVCPNFVSTEACRKLFS 132

Query: 134 TYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGGTVTYIVMDDLTV 177
             N+   KC C  +       E  +A  +          ++++ DDL V
Sbjct: 133 --NVSTMKCRCGSSMHREIPVEEQQADGV----FPSCRTSFVITDDLKV 175

[Close]

BLAST of CmoCh04G012810.1 vs. TAIR10
Match: AT5G43240.1 (AT5G43240.1 Protein of unknown function (DUF674))

HSP 1 Score: 51.2 bits (121), Expect = 8.2e-07
Identity = 39/181 (21.55%), Postives = 80/181 (44.20%), Query Frame = 1


Query: 10  LVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSP--MVGSLGSL 69
           +++ KL+ID+++ K+++ EA K+F  ++F+   LP+  +V+LL   + S    +G   ++
Sbjct: 9   VIKLKLLIDEEKNKVVFVEAGKDFVDLLFSFFTLPMGTIVRLLEMYKKSQKIAIGCFSNI 68

Query: 70  YRSLEALNITYYNQTQLNADL--PTPITQSQILRLLQNYPSSGPKTYYTCS---NTTHCC 129
           Y S+ ++ I ++        L  P  +   +   L      S    Y+ C        C 
Sbjct: 69  YASVVSMGIEHFLTEACKQMLLYPGSLNHEKCRNLKLRVDDSEATKYFVCPKFVEREQCT 128

Query: 130 YSFSATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGGT------VTYIVMDDLTV 178
            S+S   N    +C C +        +        G+ ++GG        ++++ DDL V
Sbjct: 129 ESYS---NFNTSRCSCGVLMNEVTQLDGRGGLASAGNGVEGGVFVRSDHTSFMITDDLKV 186

[Close]

BLAST of CmoCh04G012810.1 vs. TAIR10
Match: AT5G01120.1 (AT5G01120.1 Protein of unknown function (DUF674))

HSP 1 Score: 47.8 bits (112), Expect = 9.1e-06
Identity = 36/175 (20.57%), Postives = 76/175 (43.43%), Query Frame = 1


Query: 10  LVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSP--MVGSLGSL 69
           ++  KL+ID+++ K+++AEA  +F  ++F+   LP+  +V+LL     S    +G   ++
Sbjct: 9   VINLKLLIDEEKNKVVFAEAGTDFVDILFSFSTLPMGTIVRLLEMHHKSRSIAIGCFNNI 68

Query: 70  YRSLEALNITYYNQTQLNADL--PTPITQSQILRLLQNYPSSGPKTYYTCSNTTHCCYSF 129
           Y S+ ++ + +++       L  P  + Q +   +      S     + C          
Sbjct: 69  YASVVSMGMKHFSTQACKQMLLFPGSLNQDKCQNMKLKIDDSEATKCFMCPMFVRSGQCS 128

Query: 130 SATYNIQCPKCHCK--MASPASYVYEPNEARPIVGD-FLKGGTVTYIVMDDLTVK 178
               N +  +C C   M     +  E         + F++G   ++I+ DDL V+
Sbjct: 129 KGYSNFKTSRCSCGNFMDEVIQFQGEGGRGNGSQAEVFVRGAHTSFIITDDLKVQ 183

[Close]

BLAST of CmoCh04G012810.1 vs. NCBI nr
Match: gi|700195340|gb|KGN50517.1| (hypothetical protein Csa_5G180310 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26
Identity = 81/187 (43.32%), Postives = 109/187 (58.29%), Query Frame = 1


Query: 6   QTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDS-----PM 65
           QTE+ +  KL+ID K+K+ILYAEAD  F   +F+IL LP+  V+KLLST   S     PM
Sbjct: 54  QTEV-INLKLMIDNKQKRILYAEADNKFVDFLFSILSLPIGTVLKLLSTAPSSPTIVTPM 113

Query: 66  VGSLGSLYRSLEALNITYYNQTQLNADLPTPITQSQILRLLQNYPSSGPKTYYTCSNTTH 125
           +GSL SLYRS  ++   Y+   +    L  P   S++  LL +  S+    Y+TCS+   
Sbjct: 114 IGSLSSLYRSANSMKTNYFESNRKKESLLNPHLPSKLKYLLGSSSSASEPKYFTCSS--- 173

Query: 126 CCYSFSATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGGTVTYIVMDDLTVKPLP 185
           C  SFS  Y  +C KC   M + A YV+       +VG    GG VTY+VMDDLTVKP+ 
Sbjct: 174 CPDSFSNGYFARCTKCSEIMTTEALYVHYDLGDGYVVG---AGGMVTYMVMDDLTVKPIT 233

Query: 186 SSTISLS 188
           SS  ++S
Sbjct: 234 SSMSTIS 233

[Close]

BLAST of CmoCh04G012810.1 vs. NCBI nr
Match: gi|659123378|ref|XP_008461633.1| (PREDICTED: uncharacterized protein LOC103500190 isoform X1 [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 4.4e-26
Identity = 78/181 (43.09%), Postives = 108/181 (59.67%), Query Frame = 1


Query: 6   QTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQ-DSPMVGSL 65
           Q++  V  KLVIDKK K+ILYAEADK F   +F +L LP   ++KL+S     + M  SL
Sbjct: 10  QSQNKVSLKLVIDKKAKRILYAEADKTFIDFLFTMLSLPFATLMKLISISPISTTMFWSL 69

Query: 66  GSLYRSLEALNITYYNQTQLNADLPTPITQSQILRLLQNYPSSGPKT-YYTCSNTTHCCY 125
           G+LY S++ L+I Y+   +    L  P +Q   +  +++  S  P T YYTC     C  
Sbjct: 70  GNLYSSVKTLDIKYFKPNETKEKLLNPKSQLDTVFQIESSSSLAPPTNYYTC-----CGS 129

Query: 126 SFSATYNIQCPKCHCKMASPASYVYEPNEARPIVG--DFLKGGTVTYIVMDDLTVKPLPS 183
            F++T + QCPKC   M  PA+YVY   E +P  G   +++GG V Y+VMDDLTVKP+ S
Sbjct: 130 YFTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG-VRYMVMDDLTVKPIFS 184

[Close]

BLAST of CmoCh04G012810.1 vs. NCBI nr
Match: gi|659123380|ref|XP_008461634.1| (PREDICTED: uncharacterized protein LOC103500190 isoform X2 [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 4.4e-26
Identity = 78/181 (43.09%), Postives = 108/181 (59.67%), Query Frame = 1


Query: 6   QTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQ-DSPMVGSL 65
           Q++  V  KLVIDKK K+ILYAEADK F   +F +L LP   ++KL+S     + M  SL
Sbjct: 10  QSQNKVSLKLVIDKKAKRILYAEADKTFIDFLFTMLSLPFATLMKLISISPISTTMFWSL 69

Query: 66  GSLYRSLEALNITYYNQTQLNADLPTPITQSQILRLLQNYPSSGPKT-YYTCSNTTHCCY 125
           G+LY S++ L+I Y+   +    L  P +Q   +  +++  S  P T YYTC     C  
Sbjct: 70  GNLYSSVKTLDIKYFKPNETKEKLLNPKSQLDTVFQIESSSSLAPPTNYYTC-----CGS 129

Query: 126 SFSATYNIQCPKCHCKMASPASYVYEPNEARPIVG--DFLKGGTVTYIVMDDLTVKPLPS 183
            F++T + QCPKC   M  PA+YVY   E +P  G   +++GG V Y+VMDDLTVKP+ S
Sbjct: 130 YFTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG-VRYMVMDDLTVKPIFS 184

[Close]

BLAST of CmoCh04G012810.1 vs. NCBI nr
Match: gi|778708355|ref|XP_004147724.2| (PREDICTED: uncharacterized protein LOC101207769 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-22
Identity = 76/179 (42.46%), Postives = 100/179 (55.87%), Query Frame = 1


Query: 11  VRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSPMV-GSLGSLYR 70
           V  KLVIDKKRK++LY EADK F   +F IL LPV  V+KL ST    PM+ G L +LY 
Sbjct: 7   VSLKLVIDKKRKRVLYGEADKEFIDFLFTILALPVGTVIKLQST---EPMLPGPLSNLYC 66

Query: 71  SLEALNITYYNQTQLNADLPTPITQSQILRLLQNYPSSGPKTYYTCSNT---THCCYSFS 130
           S+++LN   Y + +               R LQN     PKTYY C+N       C+S S
Sbjct: 67  SMDSLNTINYFEPK---------------RRLQNL--LNPKTYYLCNNNYRKQSSCHSVS 126

Query: 131 ATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGGTVTYIVMDDLTVKPLPSSTIS 186
           +T+  +CP C   M    +YVY   E + I G ++  G   Y+VMDDLTVKP+  S++S
Sbjct: 127 STHGTKCPNCGGYMTINLAYVYVDEEEKLIEGGYVT-GMGKYMVMDDLTVKPMAYSSMS 164

[Close]

BLAST of CmoCh04G012810.1 vs. NCBI nr
Match: gi|596048663|ref|XP_007220407.1| (hypothetical protein PRUPE_ppa010643mg [Prunus persica])

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20
Identity = 78/190 (41.05%), Postives = 107/190 (56.32%), Query Frame = 1


Query: 2   STQNQTEILVRFKLVIDKKRKKILYAEADKNFFGVIFAILRLPVEDVVKLLSTGQDSPMV 61
           ++ N     V  KL++D  R K+L+AEA K+    +F +L LPV  V++LLS      MV
Sbjct: 9   NSSNTNTTSVSMKLLVDSTRGKVLFAEASKDVVDFLFTLLSLPVGTVIRLLS---KDGMV 68

Query: 62  GSLGSLYRSLEALNITYYNQTQLNADL----PTPITQSQILRLLQNYPSSGPKTYYTCSN 121
           GSLG LY S+E L+ TY  Q  LN ++       +  + IL LL N   S  K +Y CS 
Sbjct: 69  GSLGKLYESVENLDDTYL-QPNLNKNMLLEPKATVAGANILPLLTNDVDSNAKKFYMCSY 128

Query: 122 TTHCCYSFSATYNIQCPKC-HCKMASPASYVY-EPNEARPIVGDFLKGGTVTYIVMDDLT 181
            ++   S S  +  +CP C H  M++  +YV   P  ARP  G ++K G VTY+VMDDL 
Sbjct: 129 CSN--RSISNVHGTRCPDCNHGHMSNEVTYVSPAPTVARPSEGGYVK-GVVTYMVMDDLE 188

Query: 182 VKPLPSSTIS 186
           VKP+  STIS
Sbjct: 189 VKPM--STIS 189

The following BLAST results are available for this feature:

BLAST of CmoCh04G012810.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G012810.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ74_CUCSA	1.4e-26	43.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180310 PE=4 SV=1	[more]
M5X812_PRUPE	8.6e-21	41.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010643mg PE=4 SV=1	[more]
A0A0D2RSN8_GOSRA	2.1e-19	38.95	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G248100 PE=4 SV=1	[more]
A0A0A0KLL7_CUCSA	2.8e-19	40.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G180325 PE=4 SV=1	[more]
M5XSD3_PRUPE	3.6e-19	38.54	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023150mg PE=4 SV=1	[more]

BLAST of CmoCh04G012810.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01130.1	5.7e-08	24.86	Protein of unknown function (DUF674)	[more]
AT3G09140.1	1.3e-07	27.56	Protein of unknown function (DUF674)	[more]
AT3G09110.1	1.7e-07	24.85	Protein of unknown function (DUF674)	[more]
AT5G43240.1	8.2e-07	21.55	Protein of unknown function (DUF674)	[more]
AT5G01120.1	9.1e-06	20.57	Protein of unknown function (DUF674)	[more]

BLAST of CmoCh04G012810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195340\|gb\|KGN50517.1\|	2.0e-26	43.32	hypothetical protein Csa_5G180310 [Cucumis sativus]	[more]
gi\|659123378\|ref\|XP_008461633.1\|	4.4e-26	43.09	PREDICTED: uncharacterized protein LOC103500190 isoform X1 [Cucumis melo]	[more]
gi\|659123380\|ref\|XP_008461634.1\|	4.4e-26	43.09	PREDICTED: uncharacterized protein LOC103500190 isoform X2 [Cucumis melo]	[more]
gi\|778708355\|ref\|XP_004147724.2\|	5.0e-22	42.46	PREDICTED: uncharacterized protein LOC101207769 [Cucumis sativus]	[more]
gi\|596048663\|ref\|XP_007220407.1\|	1.2e-20	41.05	hypothetical protein PRUPE_ppa010643mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007750	DUF674

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G012810	CmoCh04G012810	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G012810.1	CmoCh04G012810.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G012810.1.CDS.1	CmoCh04G012810.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G012810.1.exon.1	CmoCh04G012810.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007750	Protein of unknown function DUF674	PFAM	PF05056	DUF674	coord: 11..179 score: 2.0
None	No IPR available	PANTHER	PTHR33103	FAMILY NOT NAMED	coord: 14..185 score: 2.5