CmoCh04G010540.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTAATCGTAATGGTAATAGTATGAGTATTTGTGTGTATAAAAAGGGCAAGGAATTGGGTATTCAAGTGTGATTGAGTATATTGTGTGAAGCAATTCAAGAGGGTTAGCAAACCATGTCTCTTGCAGGGAAGCTTATGAGTGAAATAGAAATAAACGTAGCTGCAGAGAAATACTACAAAGTCTTCAAAGATCAACCTTTTAATGTCCCAAATATTTCCCCAAAACTTGTTCAACAAGTTGAACTTGATGAAGGTGATTGGGACAACCGTGGCCATGGCTCCGTTAAGACGTGGAAGTACACCGTAGGTAAGTGCTCTACTTGTTTGTTTACGTGAATCACTTTCTTATTCTAAGCAATCATTATATTTCTTTATGTATTTGATTTGTTAAGATGGAAAACCTGAAGTTTTCAAAGAGCAAGCGGAATTTGACGATGAAAAATTTACAATCATTATGAATGGACTTCAAGGAGATGTGTTTGAGCATTACAAAACTTTCAAAATAATATATCAGGCCGTACCTAAAGGTCTCGAGCATAGTTTAGCAGTTCTAAGCGTGGAATATGAGAAGCTTGATGATGAGATTCCTTATCCCTACAAGTACCTCAACGCCATGGCCTCTGTCACAAAAGATATTGAATCTTACCTTAAAAAATGACAACCTTTTATATCTCGTTACGAGCTTCGTCGCTTCTTGTGGTTTTGTTACATATTTCGTAGCTTCTGTGGTTTTGTTACATATTTCAATATACTTACTCTGGTACTTGTAACATATTTCAATATACTTACTCTGGTACTTGTACTTCTTTATGTTGTTGAAGGCGTGTAAAAATAAATAAGGGTTATCCTCGTGCGTAATTAGAGAAGCTAGATGATTATGTTTGCATAAATTATAATACGTTTTGCATGAATATGATCCATCATAGACTATCTTATATTTGTCAATATGAGCATAACAGTTGGTGAAGGACTATCTTTTAAAATGTTAAGAATATAAGGAC TTGTAATCGTAATGGTAATAGTATGAGTATTTGTGTGTATAAAAAGGGCAAGGAATTGGGTATTCAAGTGTGATTGAGTATATTGTGTGAAGCAATTCAAGAGGGTTAGCAAACCATGTCTCTTGCAGGGAAGCTTATGAGTGAAATAGAAATAAACGTAGCTGCAGAGAAATACTACAAAGTCTTCAAAGATCAACCTTTTAATGTCCCAAATATTTCCCCAAAACTTGTTCAACAAGTTGAACTTGATGAAGGTGATTGGGACAACCGTGGCCATGGCTCCGTTAAGACGTGGAAGTACACCGTAGATGGAAAACCTGAAGTTTTCAAAGAGCAAGCGGAATTTGACGATGAAAAATTTACAATCATTATGAATGGACTTCAAGGAGATGTGTTTGAGCATTACAAAACTTTCAAAATAATATATCAGGCCGTACCTAAAGGTCTCGAGCATAGTTTAGCAGTTCTAAGCGTGGAATATGAGAAGCTTGATGATGAGATTCCTTATCCCTACAAGTACCTCAACGCCATGGCCTCTGTCACAAAAGATATTGAATCTTACCTTAAAAAATGACAACCTTTTATATCTCGTTACGAGCTTCGTCGCTTCTTGTGGTTTTGTTACATATTTCGTAGCTTCTGTGGTTTTGTTACATATTTCAATATACTTACTCTGGTACTTGTAACATATTTCAATATACTTACTCTGGTACTTGTACTTCTTTATGTTGTTGAAGGCGTGTAAAAATAAATAAGGGTTATCCTCGTGCGTAATTAGAGAAGCTAGATGATTATGTTTGCATAAATTATAATACGTTTTGCATGAATATGATCCATCATAGACTATCTTATATTTGTCAATATGAGCATAACAGTTGGTGAAGGACTATCTTTTAAAATGTTAAGAATATAAGGAC ATGTCTCTTGCAGGGAAGCTTATGAGTGAAATAGAAATAAACGTAGCTGCAGAGAAATACTACAAAGTCTTCAAAGATCAACCTTTTAATGTCCCAAATATTTCCCCAAAACTTGTTCAACAAGTTGAACTTGATGAAGGTGATTGGGACAACCGTGGCCATGGCTCCGTTAAGACGTGGAAGTACACCGTAGATGGAAAACCTGAAGTTTTCAAAGAGCAAGCGGAATTTGACGATGAAAAATTTACAATCATTATGAATGGACTTCAAGGAGATGTGTTTGAGCATTACAAAACTTTCAAAATAATATATCAGGCCGTACCTAAAGGTCTCGAGCATAGTTTAGCAGTTCTAAGCGTGGAATATGAGAAGCTTGATGATGAGATTCCTTATCCCTACAAGTACCTCAACGCCATGGCCTCTGTCACAAAAGATATTGAATCTTACCTTAAAAAATGA
BLAST of CmoCh04G010540.1 vs. Swiss-Prot
Match: ML328_ARATH (MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.8e-25 Identity = 51/152 (33.55%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. Swiss-Prot
Match: ML329_ARATH (MLP-like protein 329 OS=Arabidopsis thaliana GN=MLP329 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-24 Identity = 53/152 (34.87%), Postives = 90/152 (59.21%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 8.7e-22 Identity = 58/151 (38.41%), Postives = 89/151 (58.94%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-21 Identity = 57/151 (37.75%), Postives = 85/151 (56.29%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.7e-20 Identity = 55/151 (36.42%), Postives = 86/151 (56.95%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TrEMBL
Match: A0A0A0KMJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G026190 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 5.3e-58 Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TrEMBL
Match: A0A0A0KIU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G037656 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 2.6e-57 Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TrEMBL
Match: A0A0A0KIU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G040500 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 7.1e-55 Identity = 100/151 (66.23%), Postives = 126/151 (83.44%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TrEMBL
Match: A0A0A0KJB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G044510 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.9e-52 Identity = 94/151 (62.25%), Postives = 123/151 (81.46%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TrEMBL
Match: A0A0A0KMM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G047770 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 8.1e-51 Identity = 94/150 (62.67%), Postives = 119/150 (79.33%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TAIR10
Match: AT1G14930.1 (AT1G14930.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28 Identity = 56/152 (36.84%), Postives = 97/152 (63.82%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TAIR10
Match: AT1G14940.1 (AT1G14940.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 118.2 bits (295), Expect = 4.3e-27 Identity = 51/150 (34.00%), Postives = 94/150 (62.67%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TAIR10
Match: AT2G01520.1 (AT2G01520.1 MLP-like protein 328) HSP 1 Score: 115.9 bits (289), Expect = 2.1e-26 Identity = 51/152 (33.55%), Postives = 93/152 (61.18%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TAIR10
Match: AT1G14950.1 (AT1G14950.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 115.9 bits (289), Expect = 2.1e-26 Identity = 54/152 (35.53%), Postives = 92/152 (60.53%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. TAIR10
Match: AT4G23680.1 (AT4G23680.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 115.5 bits (288), Expect = 2.8e-26 Identity = 54/152 (35.53%), Postives = 95/152 (62.50%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. NCBI nr
Match: gi|778698112|ref|XP_004151415.2| (PREDICTED: MLP-like protein 328 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 7.6e-58 Identity = 109/151 (72.19%), Postives = 127/151 (84.11%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. NCBI nr
Match: gi|449449054|ref|XP_004142280.1| (PREDICTED: MLP-like protein 328 [Cucumis sativus]) HSP 1 Score: 229.6 bits (584), Expect = 3.8e-57 Identity = 106/151 (70.20%), Postives = 124/151 (82.12%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. NCBI nr
Match: gi|659098680|ref|XP_008450254.1| (PREDICTED: MLP-like protein 328 [Cucumis melo]) HSP 1 Score: 227.6 bits (579), Expect = 1.4e-56 Identity = 105/151 (69.54%), Postives = 123/151 (81.46%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. NCBI nr
Match: gi|449449132|ref|XP_004142319.1| (PREDICTED: MLP-like protein 328 [Cucumis sativus]) HSP 1 Score: 221.5 bits (563), Expect = 1.0e-54 Identity = 100/151 (66.23%), Postives = 126/151 (83.44%), Query Frame = 1
BLAST of CmoCh04G010540.1 vs. NCBI nr
Match: gi|659098658|ref|XP_008450247.1| (PREDICTED: MLP-like protein 328 [Cucumis melo]) HSP 1 Score: 217.6 bits (553), Expect = 1.5e-53 Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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