CmoCh04G009800.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh04G009800.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr04 : 4969971 .. 4971020 (+)
Sequence length372
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAGTGAGCAAGTTATGGTGATGCATGAACTTGAGAACAAAGATGAGGCACAGGAAAATACCAAATTAGGCATCAAATTGGTAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGCAAAAGCAATTGTATGTGTGGCATGTGAAAGGTAAGGTCATGCAATTGTGGCTTCTGCCAGAATCTGTTGAAATAGGGAAGGGAAGAGAGGAAAATAAGATGAGGACCCCTTTTTCCCACGTCCATGTTCCGTGTCATGAACTCATTGGTGGACGCCCCCGGTTGATATGGAAAGTAAGGATGGAGAAGCAACGGGAGAAAGTTGTTAAGGCAACAAGTATTGAATGGAAACTGTTTGGTGGCATGTTTTCTGAGTTGGGAAACACAAATGTGCCACCAAAATACCTAACTCTTTATAACATAACAAATGGGGGATTTCCAGATTTGCATCATTATTATATGTTACATATCGGTTTCAAAATTAATACGCCATGTGGTGGCATATTGTTACACAATATTTTGTGGATATTAAGAAAACAGTGTGAGTTAAGATTAGGGTAATCAAAAAAAGATTGGGATAACAACAGATTATTGCACACTTATCATTTGTCTACTTGCCAAACTATAGTGAAACATGTAGTAATTTTGTGAGATTAAAAATCTTACTTTTTTGTTAAATTTTATCTTTAAATTTTTTTTAAAAATTGTACACGTAGCTTGTTCTCGATGTGACGTGTCCCCCGTATTTCGTTCCTAATAAAATAAATGAATTTAAAAGTAAGTATGATTATTATTTTCTTCCCCCAGTTATTTGGAGGTAAATGGAAAGTCATATGGGTGAGGAAAATTGAAATATGACAGATACCAACAATTTGGTTAACTCGGGGCATCCCCATATCATTTAGTCAAGCCTTATCCATATTTTTTATTCCAAATCCTTAACTATGAGGAATACTCGGTATCCATAGTATGGTTAGTAAAATTTATCACGTTCTACCTAGTTTTATATTAAGATTATAAGAAAGTTTTTTTTTTTTTTATAGAGACTATTAA

mRNA sequence

ATGAATAGTGAGCAAGTTATGGTGATGCATGAACTTGAGAACAAAGATGAGGCACAGGAAAATACCAAATTAGGCATCAAATTGGTAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGCAAAAGCAATTGTATGTGTGGCATGTGAAAGGTAAGGTCATGCAATTGTGGCTTCTGCCAGAATCTGTTGAAATAGGGAAGGGAAGAGAGGAAAATAAGATGAGGACCCCTTTTTCCCACGTCCATGTTCCGTGTCATGAACTCATTGGTGGACGCCCCCGGTTGATATGGAAAGTAAGGATGGAGAAGCAACGGGAGAAAGTTGTTAAGGCAACAAGTATTGAATGGAAACTGTTTGGTGGCATAGACTATTAA

Coding sequence (CDS)

ATGAATAGTGAGCAAGTTATGGTGATGCATGAACTTGAGAACAAAGATGAGGCACAGGAAAATACCAAATTAGGCATCAAATTGGTAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGCAAAAGCAATTGTATGTGTGGCATGTGAAAGGTAAGGTCATGCAATTGTGGCTTCTGCCAGAATCTGTTGAAATAGGGAAGGGAAGAGAGGAAAATAAGATGAGGACCCCTTTTTCCCACGTCCATGTTCCGTGTCATGAACTCATTGGTGGACGCCCCCGGTTGATATGGAAAGTAAGGATGGAGAAGCAACGGGAGAAAGTTGTTAAGGCAACAAGTATTGAATGGAAACTGTTTGGTGGCATAGACTATTAA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh04G009800CmoCh04G009800gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh04G009800.1CmoCh04G009800.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G009800.1.exon.1CmoCh04G009800.1.exon.1exon
CmoCh04G009800.1.exon.2CmoCh04G009800.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh04G009800.1.CDS.1CmoCh04G009800.1.CDS.1CDS
CmoCh04G009800.1.CDS.2CmoCh04G009800.1.CDS.2CDS


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 21..41
scor