CmoCh04G000440.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G000440.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	MLP-like protein 28
Location	Cmo_Chr04 : 262971 .. 263517 (-)
Sequence length	459

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTGTTAGGGAAATTGGAGGGTGAGACTGAAATCAAAGCTCCAGCTTCAAAGTTTTATGAAATATTCTGCAACAGACCGCACCATATATCCAATATTTCGGGAGACAAAATACAGGGTTGTAAGTTAGAGGAGGGTGAATGGGGAACAGTTGGTTCTATCATCTATTGGAACTACTGTCATGGTTTGCTTTCCAAATCTAATATTTTAGTTTCCTAAATAAATGATGAGATTGTGTACTAATTTGTGGCGTTGTATATATTGTTAATTAGATGGAGAAGCTAAGGTTGCAAAGCATCTAATCGAAGCAGTTGATGAGGAGAAGAATATGATCCGTTTGAAAGTGCTGGAATCGGACCTTCTGAAGCATTATAAAACCTTCAAGGGTACGTTTGAAGCTACTCCAAAGGGTATTGGAAGTGTGGTTCACTGTGTTTTGGAATACGAGAAATTGCATGGAGGGATTCCAGATTCTAATTCGATACTTCAGTTCTGCCTTGATCTCTGCAAAGACCTTGGGGCTGGCCTTACGGAAGACAACTAA

mRNA sequence

ATGTCTCTGTTAGGGAAATTGGAGGGTGAGACTGAAATCAAAGCTCCAGCTTCAAAGTTTTATGAAATATTCTGCAACAGACCGCACCATATATCCAATATTTCGGGAGACAAAATACAGGGTTGTAAGTTAGAGGAGGGTGAATGGGGAACAGTTGGTTCTATCATCTATTGGAACTACTGTCATGATGGAGAAGCTAAGGTTGCAAAGCATCTAATCGAAGCAGTTGATGAGGAGAAGAATATGATCCGTTTGAAAGTGCTGGAATCGGACCTTCTGAAGCATTATAAAACCTTCAAGGGTACGTTTGAAGCTACTCCAAAGGGTATTGGAAGTGTGGTTCACTGTGTTTTGGAATACGAGAAATTGCATGGAGGGATTCCAGATTCTAATTCGATACTTCAGTTCTGCCTTGATCTCTGCAAAGACCTTGGGGCTGGCCTTACGGAAGACAACTAA

Coding sequence (CDS)

ATGTCTCTGTTAGGGAAATTGGAGGGTGAGACTGAAATCAAAGCTCCAGCTTCAAAGTTTTATGAAATATTCTGCAACAGACCGCACCATATATCCAATATTTCGGGAGACAAAATACAGGGTTGTAAGTTAGAGGAGGGTGAATGGGGAACAGTTGGTTCTATCATCTATTGGAACTACTGTCATGATGGAGAAGCTAAGGTTGCAAAGCATCTAATCGAAGCAGTTGATGAGGAGAAGAATATGATCCGTTTGAAAGTGCTGGAATCGGACCTTCTGAAGCATTATAAAACCTTCAAGGGTACGTTTGAAGCTACTCCAAAGGGTATTGGAAGTGTGGTTCACTGTGTTTTGGAATACGAGAAATTGCATGGAGGGATTCCAGATTCTAATTCGATACTTCAGTTCTGCCTTGATCTCTGCAAAGACCTTGGGGCTGGCCTTACGGAAGACAACTAA

Homology

[Close]

BLAST of CmoCh04G000440.1 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-43
Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL+GKLE + EIKA A KF+ +F  +PHH+S  S   IQGC L EG+WGTVGSI++WNY 
Sbjct: 21  SLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYV 80

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDGEAKVAK  IEAV+ +KN+I  +V+E DL+K YK+F  T + TPK  G GS+VH  LE
Sbjct: 81  HDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLE 140

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDL 145
           YEK+   +    ++LQFC+++ K++
Sbjct: 141 YEKISEEVAHPETLLQFCVEVSKEI 165

[Close]

BLAST of CmoCh04G000440.1 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 4.0e-43
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL GKLE + EIKA A KF+ +F  RPHH+S  +  KIQGC+L EG+WG VGSI++WNY 
Sbjct: 19  SLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYV 78

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDGEAKVAK  IEAV+ EKN+I  +V+E DLLK YK+F  T + TPK  G GSVVH  +E
Sbjct: 79  HDGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVE 138

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDLGAGLTED 152
           YEK+   +    + L FC+++ K++   L  +
Sbjct: 139 YEKIDDKVAHPETFLDFCVEVSKEIDEHLLNE 170

[Close]

BLAST of CmoCh04G000440.1 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 6.9e-43
Identity = 79/152 (51.97%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL+GKLE E EIKA A +F+ +F  +PHH+S  S   IQ C L EG+WGTVGSI++WNY 
Sbjct: 8   SLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYV 67

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDGEAKVAK  IEAV+ EKN+I  +V+E DL+K YK+F  T + TPK  G GS+VH  LE
Sbjct: 68  HDGEAKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWHLE 127

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDLGAGLTED 152
           YEK+   +    ++LQFC+++ +++   L  +
Sbjct: 128 YEKISDEVAHPETLLQFCVEVSQEIDEHLLSE 159

[Close]

BLAST of CmoCh04G000440.1 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-40
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL+GKLE E EIKA A KF+ +F  RPHH+S  + DKI GC+L EG+WG VGSI+ W Y 
Sbjct: 6   SLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYV 65

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDG+  V K+ IEAVD EKN+I  KVLE DL+  YK+F  T + TPK    GS+ H  LE
Sbjct: 66  HDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLE 125

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDL 145
           YEK+   +    ++LQFC+++ K++
Sbjct: 126 YEKISEEVAHPETLLQFCVEISKEI 150

[Close]

BLAST of CmoCh04G000440.1 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.8e-27
Identity = 59/144 (40.97%), Postives = 87/144 (60.42%), Query Frame = 1


Query: 1   MSLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNY 60
           M L GK+  + EI +    FYEIF  R + IS +S   IQG  L EG WGTVGS+I++ Y
Sbjct: 1   MDLSGKMVKQVEILSDGIVFYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKY 60

Query: 61  CHDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPKGIGSVVHCVLEY 120
             DG+ K AK ++EA+DEE   +  K++E DL++ YKTF    +   KG  + V     Y
Sbjct: 61  TIDGKEKTAKDIVEAIDEETKSVTFKIVEGDLMELYKTFIIIVQVDTKGEHNSVTWTFHY 120

Query: 121 EKLHGGIPDSNSILQFCLDLCKDL 145
           EKL   + + N+++ FC+++ KD+
Sbjct: 121 EKLKEDVEEPNTLMNFCIEITKDI 144

[Close]

BLAST of CmoCh04G000440.1 vs. TrEMBL
Match: A0A0A0KMB4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266880 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.9e-55
Identity = 99/152 (65.13%), Postives = 121/152 (79.61%), Query Frame = 1


Query: 1   MSLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNY 60
           MS+ GK+E   E+KA ASK +E+   RPHHISN SGDKIQGC+L +GEWG VGSI+YW+Y
Sbjct: 1   MSITGKVEAHIEMKAAASKLHEMIVKRPHHISNASGDKIQGCRLHQGEWGKVGSIVYWDY 60

Query: 61  CHDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPKGIGSVVHCVLEY 120
            HDGEAKV KH+IEAVDEEKNM+  KVLE+DLLK+YK F+   + TPKG GS+ HC LEY
Sbjct: 61  FHDGEAKVGKHVIEAVDEEKNMVVYKVLEADLLKNYKDFRFIMQFTPKGEGSIAHCTLEY 120

Query: 121 EKLHGGIPDSNSILQFCLDLCKDLGAGLTEDN 153
           EKLHG +PDS+S+L+ C ++CKDL A L E N
Sbjct: 121 EKLHGKVPDSHSMLKLCEEVCKDLDAHLMEGN 152

[Close]

BLAST of CmoCh04G000440.1 vs. TrEMBL
Match: Q9AXU0_PRUPE (Major latex-like protein OS=Prunus persica GN=PRUPE_ppa012742mg PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-51
Identity = 94/147 (63.95%), Postives = 118/147 (80.27%), Query Frame = 1


Query: 5   GKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYCHDG 64
           GK+E + EIKAPA+KF+E+F +RPHHISN+S + IQGC L EGEWGTVGS++YWNY HDG
Sbjct: 6   GKVETDVEIKAPATKFHEVFTHRPHHISNVSSNNIQGCDLHEGEWGTVGSVVYWNYFHDG 65

Query: 65  EAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLEYEK 124
           +AKVAK LIEA+D EKN+I  KV+E DLL+HYK+FK T  ATPK  G GS+VH  +EYEK
Sbjct: 66  KAKVAKELIEAIDAEKNLITFKVIEGDLLEHYKSFKITIHATPKAHGQGSIVHWTMEYEK 125

Query: 125 LHGGIPDSNSILQFCLDLCKDLGAGLT 150
            HG I D +++LQF +D+ KD+ A LT
Sbjct: 126 HHGDIEDPHTLLQFAVDVSKDVDAHLT 152

[Close]

BLAST of CmoCh04G000440.1 vs. TrEMBL
Match: M5XQB7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025363mg PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-48
Identity = 87/149 (58.39%), Postives = 116/149 (77.85%), Query Frame = 1


Query: 1   MSLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNY 60
           MS  GK++ + EIKAPA KF+E F  RPHH+S+IS DKI+GC L +G+WG VGS++ WNY
Sbjct: 1   MSYAGKVDTDVEIKAPAVKFHEFFSQRPHHLSSISSDKIKGCDLHDGDWGKVGSVVNWNY 60

Query: 61  CHDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPKGIGSVVHCVLEY 120
            HDG+AKVAK + +A+D+EKN I L+V+E +LL+HYK+FK T +ATPKG GSVVH   EY
Sbjct: 61  VHDGKAKVAKVVFDAIDDEKNSITLRVVEGNLLEHYKSFKITVQATPKGEGSVVHWTFEY 120

Query: 121 EKLHGGIPDSNSILQFCLDLCKDLGAGLT 150
           EK+HG + D +++LQ  +DL  D+GA LT
Sbjct: 121 EKVHGDVTDPHTLLQLAVDLTTDIGAHLT 149

[Close]

BLAST of CmoCh04G000440.1 vs. TrEMBL
Match: A0A061E7N0_THECC (MLP-like protein 28 OS=Theobroma cacao GN=TCM_010932 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.1e-47
Identity = 86/153 (56.21%), Postives = 114/153 (74.51%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           +L GKLEG+ EIKA A KF+++FCN+PHH+SN   +K+QGC+L +G+WGT GSII W+Y 
Sbjct: 4   ALTGKLEGDVEIKASAEKFHDMFCNKPHHVSNTCSEKVQGCELHDGDWGTEGSIICWSYV 63

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDGEAK AK +IEA+D EKN I  +++E DL+K YK+F   F+ATPK  G GS+VH   E
Sbjct: 64  HDGEAKKAKQVIEAIDSEKNSITFRMIEGDLMKEYKSFVIKFQATPKSEGEGSIVHWTFE 123

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDLGAGLTEDN 153
           YEKLH GI    ++L+F L + KD+ A LT+ N
Sbjct: 124 YEKLHEGIAHPETLLEFLLSVSKDISAHLTQGN 156

[Close]

BLAST of CmoCh04G000440.1 vs. TrEMBL
Match: A0A061E9G4_THECC (MLP-like protein 28 OS=Theobroma cacao GN=TCM_010938 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.0e-46
Identity = 85/152 (55.92%), Postives = 109/152 (71.71%), Query Frame = 1


Query: 3   LLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYCH 62
           L GKLE + EIKA A KF+++FCNRPHH+S  S DKIQGC L +G+WGTVGSI+YW+Y H
Sbjct: 5   LTGKLEADVEIKASAEKFHDMFCNRPHHVSKASSDKIQGCDLHDGDWGTVGSIVYWSYVH 64

Query: 63  DGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLEY 122
           DGEAK AK L+EA+D E N I  +V+E DL+K YK+F    +ATPK  G GS+VH   EY
Sbjct: 65  DGEAKKAKELVEAIDSENNSITFRVIEGDLMKEYKSFVIKIQATPKREGEGSIVHWTFEY 124

Query: 123 EKLHGGIPDSNSILQFCLDLCKDLGAGLTEDN 153
           EKLH GI    ++L+F + + KD+   L + N
Sbjct: 125 EKLHEGIAHPETLLEFAVQVSKDMDTHLIQGN 156

[Close]

BLAST of CmoCh04G000440.1 vs. TAIR10
Match: AT1G70830.1 (AT1G70830.1 MLP-like protein 28)

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-44
Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL+GKLE + EIKA A KF+ +F  +PHH+S  S   IQGC L EG+WGTVGSI++WNY 
Sbjct: 21  SLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYV 80

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDGEAKVAK  IEAV+ +KN+I  +V+E DL+K YK+F  T + TPK  G GS+VH  LE
Sbjct: 81  HDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLE 140

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDL 145
           YEK+   +    ++LQFC+++ K++
Sbjct: 141 YEKISEEVAHPETLLQFCVEVSKEI 165

[Close]

BLAST of CmoCh04G000440.1 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31)

HSP 1 Score: 175.6 bits (444), Expect = 2.3e-44
Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL GKLE + EIKA A KF+ +F  RPHH+S  +  KIQGC+L EG+WG VGSI++WNY 
Sbjct: 19  SLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYV 78

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDGEAKVAK  IEAV+ EKN+I  +V+E DLLK YK+F  T + TPK  G GSVVH  +E
Sbjct: 79  HDGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVE 138

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDLGAGLTED 152
           YEK+   +    + L FC+++ K++   L  +
Sbjct: 139 YEKIDDKVAHPETFLDFCVEVSKEIDEHLLNE 170

[Close]

BLAST of CmoCh04G000440.1 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34)

HSP 1 Score: 174.9 bits (442), Expect = 3.9e-44
Identity = 79/152 (51.97%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL+GKLE E EIKA A +F+ +F  +PHH+S  S   IQ C L EG+WGTVGSI++WNY 
Sbjct: 8   SLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYV 67

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDGEAKVAK  IEAV+ EKN+I  +V+E DL+K YK+F  T + TPK  G GS+VH  LE
Sbjct: 68  HDGEAKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWHLE 127

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDLGAGLTED 152
           YEK+   +    ++LQFC+++ +++   L  +
Sbjct: 128 YEKISDEVAHPETLLQFCVEVSQEIDEHLLSE 159

[Close]

BLAST of CmoCh04G000440.1 vs. TAIR10
Match: AT1G70890.1 (AT1G70890.1 MLP-like protein 43)

HSP 1 Score: 167.5 bits (423), Expect = 6.2e-42
Identity = 76/145 (52.41%), Postives = 100/145 (68.97%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL+GKLE E EIKA A KF+ +F  RPHH+S  + DKI GC+L EG+WG VGSI+ W Y 
Sbjct: 6   SLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYV 65

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           HDG+  V K+ IEAVD EKN+I  KVLE DL+  YK+F  T + TPK    GS+ H  LE
Sbjct: 66  HDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLE 125

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDL 145
           YEK+   +    ++LQFC+++ K++
Sbjct: 126 YEKISEEVAHPETLLQFCVEISKEI 150

[Close]

BLAST of CmoCh04G000440.1 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41
Identity = 74/152 (48.68%), Postives = 103/152 (67.76%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SLLGKLE E EIKAPA+ FY I+  RPHH++  +   +Q C L +GEWGTVGSI+YWNY 
Sbjct: 14  SLLGKLEVEVEIKAPAAIFYHIYAGRPHHVAKATPRNVQSCDLHDGEWGTVGSIVYWNYV 73

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLE 121
           H+G+AKVAK  IE V+ EK +I+ +V+E D++  YK+F  T + TPK  G GSVV   +E
Sbjct: 74  HEGQAKVAKERIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGTGSVVKWHIE 133

Query: 122 YEKLHGGIPDSNSILQFCLDLCKDLGAGLTED 152
           YEK+   +P   ++L F  ++ K++   L  +
Sbjct: 134 YEKIDENVPHPENLLPFFAEMTKEIDEHLLSE 165

[Close]

BLAST of CmoCh04G000440.1 vs. NCBI nr
Match: gi|449445365|ref|XP_004140443.1| (PREDICTED: MLP-like protein 43 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 2.7e-55
Identity = 99/152 (65.13%), Postives = 121/152 (79.61%), Query Frame = 1


Query: 1   MSLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNY 60
           MS+ GK+E   E+KA ASK +E+   RPHHISN SGDKIQGC+L +GEWG VGSI+YW+Y
Sbjct: 1   MSITGKVEAHIEMKAAASKLHEMIVKRPHHISNASGDKIQGCRLHQGEWGKVGSIVYWDY 60

Query: 61  CHDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPKGIGSVVHCVLEY 120
            HDGEAKV KH+IEAVDEEKNM+  KVLE+DLLK+YK F+   + TPKG GS+ HC LEY
Sbjct: 61  FHDGEAKVGKHVIEAVDEEKNMVVYKVLEADLLKNYKDFRFIMQFTPKGEGSIAHCTLEY 120

Query: 121 EKLHGGIPDSNSILQFCLDLCKDLGAGLTEDN 153
           EKLHG +PDS+S+L+ C ++CKDL A L E N
Sbjct: 121 EKLHGKVPDSHSMLKLCEEVCKDLDAHLMEGN 152

[Close]

BLAST of CmoCh04G000440.1 vs. NCBI nr
Match: gi|645229331|ref|XP_008221417.1| (PREDICTED: MLP-like protein 31 [Prunus mume])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 95/147 (64.63%), Postives = 119/147 (80.95%), Query Frame = 1


Query: 5   GKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYCHDG 64
           GK+E + EIKAPA+KF+E+  +RPHHISN+S + IQGC L EGEWGTVGS++YWNY HDG
Sbjct: 6   GKVETDVEIKAPATKFHEVLTHRPHHISNVSPNNIQGCDLHEGEWGTVGSVVYWNYFHDG 65

Query: 65  EAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLEYEK 124
           +AKVAK LIEA+D EKN+I  KV+E DLL+HYK+FK T +ATPK  G GS+VHC +EYEK
Sbjct: 66  KAKVAKALIEAIDAEKNLITFKVIEGDLLEHYKSFKITIQATPKAHGQGSIVHCTMEYEK 125

Query: 125 LHGGIPDSNSILQFCLDLCKDLGAGLT 150
            HG I D +++LQF +D+ KDL A LT
Sbjct: 126 HHGDIEDPHTLLQFVVDVSKDLDAHLT 152

[Close]

BLAST of CmoCh04G000440.1 vs. NCBI nr
Match: gi|596198268|ref|XP_007223651.1| (hypothetical protein PRUPE_ppa012742mg [Prunus persica])

HSP 1 Score: 209.5 bits (532), Expect = 4.0e-51
Identity = 94/147 (63.95%), Postives = 118/147 (80.27%), Query Frame = 1


Query: 5   GKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYCHDG 64
           GK+E + EIKAPA+KF+E+F +RPHHISN+S + IQGC L EGEWGTVGS++YWNY HDG
Sbjct: 6   GKVETDVEIKAPATKFHEVFTHRPHHISNVSSNNIQGCDLHEGEWGTVGSVVYWNYFHDG 65

Query: 65  EAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPK--GIGSVVHCVLEYEK 124
           +AKVAK LIEA+D EKN+I  KV+E DLL+HYK+FK T  ATPK  G GS+VH  +EYEK
Sbjct: 66  KAKVAKELIEAIDAEKNLITFKVIEGDLLEHYKSFKITIHATPKAHGQGSIVHWTMEYEK 125

Query: 125 LHGGIPDSNSILQFCLDLCKDLGAGLT 150
            HG I D +++LQF +D+ KD+ A LT
Sbjct: 126 HHGDIEDPHTLLQFAVDVSKDVDAHLT 152

[Close]

BLAST of CmoCh04G000440.1 vs. NCBI nr
Match: gi|1009155010|ref|XP_015895485.1| (PREDICTED: MLP-like protein 28 [Ziziphus jujuba])

HSP 1 Score: 204.9 bits (520), Expect = 9.9e-50
Identity = 91/149 (61.07%), Postives = 114/149 (76.51%), Query Frame = 1


Query: 2   SLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNYC 61
           SL+GKLE + EIKAPASKF+EIF ++PHHI N+S D IQGC+L EGEWGTVGS+IYW Y 
Sbjct: 4   SLVGKLETDVEIKAPASKFHEIFRHKPHHIFNVSSDFIQGCELHEGEWGTVGSVIYWKYF 63

Query: 62  HDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPKGIGSVVHCVLEYE 121
           HDG+ + AK L+EA+D+E N I  K+LE DL++HYK+FK T +  PKG GSV+H  LEYE
Sbjct: 64  HDGKPRAAKELVEAIDDENNSITFKILEGDLMEHYKSFKATLKCIPKGEGSVIHWTLEYE 123

Query: 122 KLHGGIPDSNSILQFCLDLCKDLGAGLTE 151
           KLH  I D ++++QF  DL KDL   L E
Sbjct: 124 KLHDEIIDPHTMIQFASDLSKDLQKSLVE 152

[Close]

BLAST of CmoCh04G000440.1 vs. NCBI nr
Match: gi|449445429|ref|XP_004140475.1| (PREDICTED: MLP-like protein 31 [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 2.2e-49
Identity = 92/152 (60.53%), Postives = 114/152 (75.00%), Query Frame = 1


Query: 1   MSLLGKLEGETEIKAPASKFYEIFCNRPHHISNISGDKIQGCKLEEGEWGTVGSIIYWNY 60
           MS+L KLE + EI+APASKF+E+   R HH+S  SGDK+Q C+L EG+WG VGSIIYWNY
Sbjct: 1   MSVLRKLEADVEIEAPASKFHELLHKRLHHVSKASGDKVQSCELHEGDWGKVGSIIYWNY 60

Query: 61  CHDGEAKVAKHLIEAVDEEKNMIRLKVLESDLLKHYKTFKGTFEATPKGIGSVVHCVLEY 120
            HDG+AKV K +IEAVDEE N+I  KV++ DLLK YKTF  T +A PKG GSV+H  +EY
Sbjct: 61  FHDGKAKVGKDVIEAVDEENNLISFKVIDGDLLKDYKTFNYTIQAVPKGKGSVIHWTMEY 120

Query: 121 EKLHGGIPDSNSILQFCLDLCKDLGAGLTEDN 153
           EKLH  + DS+S+LQFCL + KD+   L   N
Sbjct: 121 EKLHEKVADSHSMLQFCLAISKDIDVHLQRGN 152

The following BLAST results are available for this feature:

BLAST of CmoCh04G000440.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MLP28_ARATH	1.8e-43	54.48	MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1	[more]
MLP31_ARATH	4.0e-43	53.29	MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2	[more]
MLP34_ARATH	6.9e-43	51.97	MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1	[more]
MLP43_ARATH	1.1e-40	52.41	MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1	[more]
KIRO_ACTDE	1.8e-27	40.97	Kirola OS=Actinidia deliciosa PE=1 SV=1	[more]

BLAST of CmoCh04G000440.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMB4_CUCSA	1.9e-55	65.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266880 PE=4 SV=1	[more]
Q9AXU0_PRUPE	2.8e-51	63.95	Major latex-like protein OS=Prunus persica GN=PRUPE_ppa012742mg PE=4 SV=1	[more]
M5XQB7_PRUPE	2.9e-48	58.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025363mg PE=4 SV=1	[more]
A0A061E7N0_THECC	7.1e-47	56.21	MLP-like protein 28 OS=Theobroma cacao GN=TCM_010932 PE=4 SV=1	[more]
A0A061E9G4_THECC	6.0e-46	55.92	MLP-like protein 28 OS=Theobroma cacao GN=TCM_010938 PE=4 SV=1	[more]

BLAST of CmoCh04G000440.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70830.1	1.0e-44	54.48	MLP-like protein 28	[more]
AT1G70840.1	2.3e-44	53.29	MLP-like protein 31	[more]
AT1G70850.1	3.9e-44	51.97	MLP-like protein 34	[more]
AT1G70890.1	6.2e-42	52.41	MLP-like protein 43	[more]
AT5G28010.1	4.0e-41	48.68	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

BLAST of CmoCh04G000440.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445365\|ref\|XP_004140443.1\|	2.7e-55	65.13	PREDICTED: MLP-like protein 43 [Cucumis sativus]	[more]
gi\|645229331\|ref\|XP_008221417.1\|	1.1e-51	64.63	PREDICTED: MLP-like protein 31 [Prunus mume]	[more]
gi\|596198268\|ref\|XP_007223651.1\|	4.0e-51	63.95	hypothetical protein PRUPE_ppa012742mg [Prunus persica]	[more]
gi\|1009155010\|ref\|XP_015895485.1\|	9.9e-50	61.07	PREDICTED: MLP-like protein 28 [Ziziphus jujuba]	[more]
gi\|449445429\|ref\|XP_004140475.1\|	2.2e-49	60.53	PREDICTED: MLP-like protein 31 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000916	Bet_v_I/MLP
IPR023393	START-like_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0006952	defense response
GO:0009607	response to biotic stimulus

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G000440	CmoCh04G000440	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G000440.1	CmoCh04G000440.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G000440.1.CDS.2	CmoCh04G000440.1.CDS.2	CDS
CmoCh04G000440.1.CDS.1	CmoCh04G000440.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G000440.1.exon.2	CmoCh04G000440.1.exon.2	exon
CmoCh04G000440.1.exon.1	CmoCh04G000440.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 3..148 score: 1.1
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 2..151 score: 9.1
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 1..150 score: 1.5
None	No IPR available	PANTHER	PTHR31907	FAMILY NOT NAMED	coord: 2..152 score: 1.9
None	No IPR available	PANTHER	PTHR31907:SF4	MLP-LIKE PROTEIN 165-RELATED	coord: 2..152 score: 1.9
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 69..149 score: 9.84E-33coord: 1..35 score: 9.84