CmoCh02G014210.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh02G014210.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr02 : 8401784 .. 8404963 (-)
Sequence length1483
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCACGTGGGCAAAGTGAAGCAGCCAATTCCAGAGAACCACATCAGTCCTGGTACTGTACCATAAATAATCGAGTTCGTCGCGTCCTTATCTCTTCCTCCCTTGCCCTAACGCCCGCCCCGCCTCGCCCCGCCCACTTCTTGGCTCCATTTCTCGCAATCTCCGAATCTCTTTGATTATATAATCTTCTCCCACGTTTGGACACAACGCACCTGAAATCACCAGAAATTTATGGCCAAATTGTTAGCCTTCTCCTGCATTTGCACCTACACCTTCAGCTTTGTTTCTTCTTTTCTCTTCAAATGCACAAGGCCACTGAGGTGCAGGTGCTTCTGCAAGTGAATGCCATCTTGGCTCTCTCTCTCCACCACCGCCGCCATCTCCTCCCCGTACGGTTTTTTCAGGTAATCCATTTCCTCTTAAATCTGGATCTTCTCCTCTTCTTAAGCTATACAATCCATTTATCAGAATGTAGGACCGTGGAACTCTTCTTTTTCTTCCGCTCTCTCTCTCTATCTCTATATGTATTATGTGTATATTTTTGTAGAGATCGAGATCGTGATGTTCACACTTTTAGTTTTTATTTGCTGTTTCAACATGCATCTGCTAAATTCATTGATTACATCTGTTTTTCTATCCAAAAACAGAGAGGACTTAAACAGTTTATGTGGAAGAATTTTGTAAAAATTTATGAAACAAACTAGCGTGTGTGAGAATTCGTTTTTGAACGGACTTTTTTGATTTAACGTGTTATTTTTAGTACAATAGACTAATTATTCATTACTATTATGTTCATTTTGAAGAATTTCTAGATATGAACAACTTTAGATATTCACATGCATAAACAATTGTATGTTTTATGTGAATTAAATTCAAATTAATCTAGGAATTCCTTTTTCTTCACTCCCTCTACTTGTACGAAATAATATGAACTCAAAGTTGTTCAGAAATTGAATCTGTTGGACATGGGAGACTGAAAGTGTTTCGGGAAAGATCATAAGCAAGAATGTAAATGGTTAAGAAAGTAAACTTGACTGGATTTCTTCTTTGAACAGTGTGTGCCTGAATTCTACCTTAATTTCTCGGAGCATCTTAAATGGTCCATTAGGAAAGGAAAAAACAAAATTAATACAGTAAGGAAATTATTAAAATAATTGAAAAATATAAGGGGGAAGAAGAAATCCCCAAACATTCATTCAAATAATTGAGAAGCCCCATGCAATGATCGTAAAATATTGTTAAGGAAATTAATTATTAGTGGTAGCTTCCTGAACATCATCGAAAACGCCAAATAATCTGCAGATTATAACATTGAGCTAAATTTGTGGCAAAATTAATAAAACCCAGAATTCTCATCATAAACCTAGTGATTAGTGGTAATTTAACATCCTGCCTCTATTTTGAAGGGTAGATTTCAATTATTTTAGATCTAATCTCTTAGTAATTGATGGGTGATCTGTAAATCAAAATATGCTGTTCACTTAACTTGCATGAACAGGAAGCACAGTCCAAGCATATTGAAGTTTGAAAGGCCTTGAATTGTTGTAGGGGAAAAGTAATTAAATACTGAAGGGGTATGAGTGAGTTGTACCTGGATTATTTGACTTGGCCAACGTTGTTTGTTTGTCCTGCCGTACCTTTTCCTCATGAACTATTTTGTAAACTTTAGTTTTAAAACAGTGAATTCTGGCCACTTAAATATTGAGTAAGAAAGAAAAAACTGATATTTCATTCGGTTTATATAATTATTACACAAAATCAACTAAATTAAAACCGTGATTCATTCTCAATTGCTTTTACAGTTTGCTGAAAATAGATAGAGGTTTAATTTTATCATATTGATTTAAATACGTATCAAAAGACAAACTCTTGCAATAATTCAAAATTGAAAAGAAATAAACAAAATAAAAGTAACATATCTTTTATAGGTTGAGAAGGTAGGGAATTGGACTCTACCAAGGAAGGTCACTTGTGGTTGGTGAGAATATATTTTCTGATGATTCTAGGTCAGCTTCAATCTATCTTGGATTGTGACTATCTTTCAGCTAATTTAAATTATTTTGAGTTAAGTTTAAATTATAAATCAATTTTCATAGAATTCTAATTTATATAGCAGAATTTTAAATTATGATCATGGAGCTCTTTAGGTAAAATTAAATTTTAAGGAGTAGTCTCTTGCAACAAGGTAGCCAATGACTTCGGCCTAGGCCAACTAAGTAAGTGTCTCCACTATTAGCTTGGTTTGATGAATTGTATTATGCATGATGATGCAATGTCCCATGACTCCTCCACTTGTTATATGTATGAATGATATGTTAAGTTATACAAAGTTTTGATGCTATGTTATGATGTGTCATATATGTCATATGTTATGTTATACTATGATAACTTATATCAGGTATAAAAGCTATGTTATATTAGTGATCATATCATGTTGTATAAAGTTGTTATTAAATCAATAAGATATGATAGCATAAACTTTCGTAGAACATGTCAGGAAAGCTATGTTAGGTATCTTGGAATTTACAAGAATTATGACGGTATAATTCATGACTTGTTAGGCTATAAATAAAGAGAAGTTTGTCTTGCATCATACATTATGCCAGGATTATAACCTATGGGGATTTCATGCATATTTGTGTGTCATGTGCATTGGGATATTTCACCAATATGATGAGTACGGATAAATACTTTACGACATTTATGTTTTCCATGTTATTATGTGGGTCCTTCCCTCCATAGCATTCGACAACAACACATTAGCAAGTGCTAGCTTGACGAGCCAAGTCTAGGGAGTGTGTGAGCCCCTTGGCGGGCCCATGCACGCACACGTGAGCCATCCGTATAGAAATATTATACATCCAACCTTGTCGAGCCTAAAGTCATGCTATGATGTTTTAAGAGGATAGATCTTACCATGGTGCATGTGTTTACCTTTTCTAACTAGTGTGGTTACAATGAGATAATGATGAAAGTCATAGAACCACGGAGAACCGGTGCAGAGTAGTTGCATATTGTCTATTTTATCGCCTTTAGATTAGATAATGGCATTGTTTTGTTTAAATATCACGTTATTTTAATATTTTATTATGAATGTTTAAGTCCATGACATCGTTTTTTTAATTTGTAATTTTGCCTCTTTAATTAGTTTGGTTAAATATGACCATTCATTTGCAG

mRNA sequence

ATGGATCACGTGGGCAAAGTGAAGCAGCCAATTCCAGAGAACCACATCAGTCCTGAAATTTATGGCCAAATTGTTAGCCTTCTCCTGCATTTGCACCTACACCTTCAGCTTTGTTTCTTCTTTTCTCTTCAAATGCACAAGGCCACTGAGGTGCAGGTGCTTCTGCAAGTGAATGCCATCTTGGCTCTCTCTCTCCACCACCGCCGCCATCTCCTCCCCGTACGGTTTTTTCAGGTTGAGAAGGTAGGGAATTGGACTCTACCAAGGAAGGTCACTTGTGGTTGGTGAGAATATATTTTCTGATGATTCTAGGTCAGCTTCAATCTATCTTGGATTGTGACTATCTTTCAGCTAATTTAAATTATTTTGAGTTAAGTTTAAATTATAAATCAATTTTCATAGAATTCTAATTTATATAGCAGAATTTTAAATTATGATCATGGAGCTCTTTAGGTAAAATTAAATTTTAAGGAGTAGTCTCTTGCAACAAGGTAGCCAATGACTTCGGCCTAGGCCAACTAAGTAAGTGTCTCCACTATTAGCTTGGTTTGATGAATTGTATTATGCATGATGATGCAATGTCCCATGACTCCTCCACTTGTTATATGTATGAATGATATGTTAAGTTATACAAAGTTTTGATGCTATGTTATGATGTGTCATATATGTCATATGTTATGTTATACTATGATAACTTATATCAGGTATAAAAGCTATGTTATATTAGTGATCATATCATGTTGTATAAAGTTGTTATTAAATCAATAAGATATGATAGCATAAACTTTCGTAGAACATGTCAGGAAAGCTATGTTAGGTATCTTGGAATTTACAAGAATTATGACGGTATAATTCATGACTTGTTAGGCTATAAATAAAGAGAAGTTTGTCTTGCATCATACATTATGCCAGGATTATAACCTATGGGGATTTCATGCATATTTGTGTGTCATGTGCATTGGGATATTTCACCAATATGATGAGTACGGATAAATACTTTACGACATTTATGTTTTCCATGTTATTATGTGGGTCCTTCCCTCCATAGCATTCGACAACAACACATTAGCAAGTGCTAGCTTGACGAGCCAAGTCTAGGGAGTGTGTGAGCCCCTTGGCGGGCCCATGCACGCACACGTGAGCCATCCGTATAGAAATATTATACATCCAACCTTGTCGAGCCTAAAGTCATGCTATGATGTTTTAAGAGGATAGATCTTACCATGGTGCATGTGTTTACCTTTTCTAACTAGTGTGGTTACAATGAGATAATGATGAAAGTCATAGAACCACGGAGAACCGGTGCAGAGTAGTTGCATATTGTCTATTTTATCGCCTTTAGATTAGATAATGGCATTGTTTTGTTTAAATATCACGTTATTTTAATATTTTATTATGAATGTTTAAGTCCATGACATCGTTTTTTTAATTTGTAATTTTGCCTCTTTAATTAGTTTGGTTAAATATGACCATTCATTTGCAG

Coding sequence (CDS)

ATGGATCACGTGGGCAAAGTGAAGCAGCCAATTCCAGAGAACCACATCAGTCCTGAAATTTATGGCCAAATTGTTAGCCTTCTCCTGCATTTGCACCTACACCTTCAGCTTTGTTTCTTCTTTTCTCTTCAAATGCACAAGGCCACTGAGGTGCAGGTGCTTCTGCAAGTGAATGCCATCTTGGCTCTCTCTCTCCACCACCGCCGCCATCTCCTCCCCGTACGGTTTTTTCAGGTTGAGAAGGTAGGGAATTGGACTCTACCAAGGAAGGTCACTTGTGGTTGGTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh02G014210CmoCh02G014210gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh02G014210.1CmoCh02G014210.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh02G014210.1.three_prime_UTR.1CmoCh02G014210.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh02G014210.1.CDS.3CmoCh02G014210.1.CDS.3CDS
CmoCh02G014210.1.CDS.2CmoCh02G014210.1.CDS.2CDS
CmoCh02G014210.1.CDS.1CmoCh02G014210.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh02G014210.1.exon.3CmoCh02G014210.1.exon.3exon
CmoCh02G014210.1.exon.2CmoCh02G014210.1.exon.2exon
CmoCh02G014210.1.exon.1CmoCh02G014210.1.exon.1exon