CmoCh02G005360.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G005360.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CBS domain-containing family protein
Location	Cmo_Chr02 : 3041795 .. 3045218 (+)
Sequence length	1229

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGCAAAAACTGCAAGCAAGAAAATAAAATCCCAGTCTCCTCGTTTGAACCTCACGAACTTCGGCGACTGTGGAGGGTTTGCTTTGTGTTGATTCGTGAAGCCTCTCTCATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAACTAGTTTTTCGGTTCAGGAGCTGTTGTTCGGGCCTTGCCGGAGACCTTCATCGCCGATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATCTACGGGGCTCCGGAAATCTACTTCAATCGCCGCTAGTGGCACCTTGATGGCCAATTCTGTACCGGTGTGTGGTTCTGTTCTTAATTGTTTCTGTTGCTTTGTTTTTTTTTTCGAATACTCTTTACGAATTTACCTAATGCTTTTGAGGAATGTAGCTTGGTAGATTTTGATTAGATTTTTATGATTGAACTTCCTCCGTCATGGTGAAGAAAGCAAAAGATTGAACTAAATATTCACTATGAAAGAGCAATGCCAACTTGTAGGATAGAATCTTCTTTAAAGAAGAGATCAGATTTCATTGATGAATGAAATAAAGTCACATCACCCACGATTTTGTGCATTATAATTTTGAATAGCCTCATTAACAACGAGAAATTTGATATGAACTTGCTTCCCCTCTACAAATCTCTCAGGTTAGTGGATATGCTTAATGGAAAAAAGTGTTTCCATCTCCTTCTCTGATCCGCTCACTTAGAACTTTTTCTTGAACTAACCTTCTACAGTTTGACAAGAACACCAATTTTCTTCCATGAATTCTTTTAGCTCTACTGTGTTTTTGCTTACCTTGTGAACAAAAACATAAAATCTAAACAACTACAAGAAAAATTACTTTCTATTCTGGAAATTTTTGTATTGATTAATCCATCAACAGGGGCCTTCATAGAAAAGAAAAATTATCCTTCATTTTCTATGACATCTTGTGATCTGGTGAAGAGGTAGAAGGGACAGGTCAACATGGCCTGGAATTGAAATTTATACTCACGAGCAGTGTTCTTCTGAGTAACTGTACTCTGAATTTGTTCTCATCTTGTAATCTTTTCTTGAGTGTTAGAAATTTATTCTTCTTTCCTTAATATTTTGATATGCAGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGGTAATTGGAATTTTTGGATATTTCCCCCCAGCCCTGTGGGAAATGTGGCTTATTATCTCTGTTTATGAACAGCTTTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTATCATTTCCAGACTGCTACCTAAAATGCTTAGAATTTGTGTGAATTTAGCTCATCTGAATTTCTTTTTGAGCCCTTAGACTCCTGTATCTGTATTATCAATCAAGTGTATGTTTGATTTAGATGGCTTAATATATCAATGCTCGTAATAAAAATACTTCTTGATGCAGGTTGGTGTCGTATCGGACTATGATTTGTTAGCACTAGACTCCATCTCAGGTATATCAGAACTTTCTTGTTATTGCTGATACAACTACCATTGTTTATCCCGTTTGAGAAAGATTGTTCGGTTGTCTTATCTTTGGGTGTTTGGCTATTTGTACCATCTCTTCCTATGACATGTTTTCAGGCGAATTACAGACAGCATTAATAAAGAGAGAATCTAACTTCTTGGATGTATTAATTTTTTTCCCAAATTTTTCTTTATGTTGAAAGATGCATCAGATCATTTGTTACTCATGAATTATGTTAGTCATTACTTTAACCTGAGAATATTTTTGCATAAGGTCAAGTATTTTAGATTGACAAGATTTCCGAATGTTCTAATTAGGTGGTGGAACAACGGATGGAAGCATGTTTCCTGAAGTTGACAGCACGTGGAAAGTATGCATTGACCTCCTTTTTTGGCGTTTAATTGTAGTTGTTTGCTTCATACTCTTTACTATCATTGCTCCCGATGACTTTATGTATTCAATTATTTCTTCTGAGTCTTAAAAGAAGTAGATAACATAACTTTGTGAAAAGTAGAAGGTAAGAGTCACTGTTCTAATCTACCATGTAAATAATAAAGAGCTTAGACGGAATTGGTTCAAGTCATGGTAACCACCTACCTAGAATTTAATATCCTACGAGTTAGAGAATAGTCTAGGTGTGTGCAAGCTGGTCAAAGACACTCACGGATTAGAAAAGATCACTGTTTTGGTAAGAGCCTTTATTTCAAAAAGAGCTTGAACCTTTCAGTTTCAACGACTCGGGTAATATTAGCAAAAAGCATGAGGATAAGTTCACTGGTCAAATATTTCATTTTCATGGGTCTTGGTTTGTTTTCTCATTTATGGTTGTGGTTCATTTTTCTTGCTCATGAAAATCGCTGTCGGACTGATGATCAAAACACTTATATGGCTTTGAATTCGAGTTATGGTTGATCTATTATTTCAACTCCTTCATATGGTACTAGTTTGTAGAGGACATGAAATGAAAATCTTCTGCACAAATGGTTTCTCTAATTCTAAATCATCATCCTTGTAGACATTTAATGAGGTACAAAGTCTTCTAAGTAAAACCAACGGAAAGGTGGTCGGCGATTTGATGACACCGGTGCCTCTTGTTGTTAGAGAAAATAGTGATCTTGAGGACGCTGCTAGGTTCAAACATGCTTTTTTCCTTTTTCTTTATAGTATCATATCATTTCCTTAACTTCTTCGCTTTGAACCATTTCTATTTTCTCAAATGCAGATTATTGCTTCAGACAAAGTATCGCCGCCTTCCAGTGGTAGATGCGGATGGAAAGCTGGTAAGAGATATCTATCTATTCCACTCCTCATCTGAATTATTGGTTGTTTTTGGCATCAAAATGATGAAACCTTTCATGAAGGTTGGGATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAGATTAAACGGGCTGAAGAAAACAGGACATGATTTTCCTATACTCAGAATCAGTCAATCTGCATGCTGTTAGGTATGAGGACTCTGAAATGCAATCATACAATTTTGGGTCATGATTGTATTAATGTACACAACACTTTGTATAAATGGATATGATCTTGTTTTAACCATAAAACTAATAAAAACTGTGTTCTTATCAAAATATACAAATTTGTGACACCTTTCACAAGTCGCAGAGATTTGGTTGATAAATGTATTTTAGTGTCAAACAAACGTTTTCTTTGACAATTTTTAGTTGTCAACAAGACAGTTTGAAACATCAAAACAAGAACAAGGACTATTCATGAGTTGGTACCTTTTAAATGTCGATATAGTTGCCGACAGACACATTTGAACTTGTTTGAATCTAAGATTGTTGAAGCAGGG

mRNA sequence

AGTGCAAAAACTGCAAGCAAGAAAATAAAATCCCAGTCTCCTCGTTTGAACCTCACGAACTTCGGCGACTGTGGAGGGTTTGCTTTGTGTTGATTCGTGAAGCCTCTCTCATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAACTAGTTTTTCGGTTCAGGAGCTGTTGTTCGGGCCTTGCCGGAGACCTTCATCGCCGATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATCTACGGGGCTCCGGAAATCTACTTCAATCGCCGCTAGTGGCACCTTGATGGCCAATTCTGTACCGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGCTTTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTTGGTGTCGTATCGGACTATGATTTGTTAGCACTAGACTCCATCTCAGGTGGTGGAACAACGGATGGAAGCATGTTTCCTGAAGTTGACAGCACGTGGAAAACATTTAATGAGGTACAAAGTCTTCTAAGTAAAACCAACGGAAAGGTGGTCGGCGATTTGATGACACCGGTGCCTCTTGTTGTTAGAGAAAATAGTGATCTTGAGGACGCTGCTAGATTATTGCTTCAGACAAAGTATCGCCGCCTTCCAGTGGTAGATGCGGATGGAAAGCTGGTTGGGATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAGATTAAACGGGCTGAAGAAAACAGGACATGATTTTCCTATACTCAGAATCAGTCAATCTGCATGCTGTTAGGTATGAGGACTCTGAAATGCAATCATACAATTTTGGGTCATGATTGTATTAATGTACACAACACTTTGTATAAATGGATATGATCTTGTTTTAACCATAAAACTAATAAAAACTGTGTTCTTATCAAAATATACAAATTTGTGACACCTTTCACAAGTCGCAGAGATTTGGTTGATAAATGTATTTTAGTGTCAAACAAACGTTTTCTTTGACAATTTTTAGTTGTCAACAAGACAGTTTGAAACATCAAAACAAGAACAAGGACTATTCATGAGTTGGTACCTTTTAAATGTCGATATAGTTGCCGACAGACACATTTGAACTTGTTTGAATCTAAGATTGTTGAAGCAGGG

Coding sequence (CDS)

ATGGAGTCGATTGGCTGTAGTTTGAGTTCTTTATCGCTTGCGCAATTCAGGGCAACTAGTTTTTCGGTTCAGGAGCTGTTGTTCGGGCCTTGCCGGAGACCTTCATCGCCGATAGTTCATGCATCTGTGGCTCGGAGCTTTTCTACGTCTTGTCGATCTACGGGGCTCCGGAAATCTACTTCAATCGCCGCTAGTGGCACCTTGATGGCCAATTCTGTACCGTCAAGTAATGGTGTGTACACTGTTGGTGACTTTATGACTAGGAAAGAGGAGTTACATGTTGTAAAGCCCACAACCACTGTCGAAGAAGCTTTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAACTGGTTGGTGTCGTATCGGACTATGATTTGTTAGCACTAGACTCCATCTCAGGTGGTGGAACAACGGATGGAAGCATGTTTCCTGAAGTTGACAGCACGTGGAAAACATTTAATGAGGTACAAAGTCTTCTAAGTAAAACCAACGGAAAGGTGGTCGGCGATTTGATGACACCGGTGCCTCTTGTTGTTAGAGAAAATAGTGATCTTGAGGACGCTGCTAGATTATTGCTTCAGACAAAGTATCGCCGCCTTCCAGTGGTAGATGCGGATGGAAAGCTGGTTGGGATTATCACAAGAGGCAATGTGGTAAGAGCTGCTCTACAGATTAAACGGGCTGAAGAAAACAGGACATGA

Homology

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BLAST of CmoCh02G005360.1 vs. Swiss-Prot
Match: CBSX1_ARATH (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-75
Identity = 154/226 (68.14%), Postives = 176/226 (77.88%), Query Frame = 1


Query: 11  LSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMA 70
           LS    RA+S      L  P      P    + +RSF +  R      S S AA  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIP----SASSAAGSTLMT 69

Query: 71  NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVS 130
           NS    +GVYTVG+FMT+KE+LHVVKPTTTV+EALE+LVE RITGFPVID++WKLVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 131 DYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVREN 190
           DYDLLALDSISG G T+ SMFPEVDSTWKTFN VQ LLSKTNGK+VGDLMTP PLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 191 SDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRA 237
           ++LEDAA++LL+TKYRRLPVVD+DGKLVGIITRGNVVRAALQIKR+
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

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BLAST of CmoCh02G005360.1 vs. Swiss-Prot
Match: CBSX2_ARATH (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.0e-70
Identity = 142/206 (68.93%), Postives = 165/206 (80.10%), Query Frame = 1


Query: 46  SFSTSCRSTGLRKST---SIAASGTLMA-------NSVPSSNGVYTVGDFMTRKEELHVV 105
           SFS    S   R ST   SI  S    A       NSVP+ NG YTVGDFMT ++ LHVV
Sbjct: 33  SFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVV 92

Query: 106 KPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVD 165
           KP+T+V++ALE+LVEK++TG PVIDDNW LVGVVSDYDLLALDSISG    D ++FP+VD
Sbjct: 93  KPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVD 152

Query: 166 STWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADG 225
           STWKTFNE+Q L+SKT GKVVGDLMTP PLVVR++++LEDAARLLL+TK+RRLPVVDADG
Sbjct: 153 STWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADG 212

Query: 226 KLVGIITRGNVVRAALQIKRAEENRT 242
           KL+GI+TRGNVVRAALQIKR  EN T
Sbjct: 213 KLIGILTRGNVVRAALQIKRETENST 238

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BLAST of CmoCh02G005360.1 vs. Swiss-Prot
Match: Y1426_METJA (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1426 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-10
Identity = 39/145 (26.90%), Postives = 80/145 (55.17%), Query Frame = 1


Query: 94  VVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGSMFPE 153
           VV     + + + +  + +I+G PV++ + KLVG++S+ D++   +I         + P 
Sbjct: 26  VVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLILPS 85

Query: 154 ----VDSTWKTFNEVQSLLSKTNGKV---VGDLMTPVPLVVRENSDLEDAARLLLQTKYR 213
               ++   KT  +++  +      +   V D+MT   +V + +  + DAA+L+++   +
Sbjct: 86  PLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIK 145

Query: 214 RLPVVDADGKLVGIITRGNVVRAAL 232
           RLPVVD +G L+GI+TRG+++ A +
Sbjct: 146 RLPVVDDEGNLIGIVTRGDLIEALI 168

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BLAST of CmoCh02G005360.1 vs. Swiss-Prot
Match: IMDH_AQUAE (Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 38/135 (28.15%), Postives = 68/135 (50.37%), Query Frame = 1


Query: 95  VKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEV 154
           VKP T V+EAL+I+ + +I+G PV+D+  KL+G++++ DL                    
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDL-------------------- 162

Query: 155 DSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVR-ENSDLEDAARLLLQTKYRRLPVVDA 214
                     + +  +   K V + MT   L+   E   L++A  +  + K  +LP+VD 
Sbjct: 163 ----------RFIKPEDYSKPVSEFMTKENLITAPEGITLDEAEEIFRKYKIEKLPIVDK 207

Query: 215 DGKLVGIITRGNVVR 229
           +GK+ G+IT  ++V+
Sbjct: 223 EGKIKGLITIKDIVK 207

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BLAST of CmoCh02G005360.1 vs. Swiss-Prot
Match: Y8960_DICDI (CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum GN=DDB_G0289609 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 38/144 (26.39%), Postives = 70/144 (48.61%), Query Frame = 1


Query: 90  EELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGS 149
           + L  +   TT++ AL+ L    I   PV+D++  L G+++D DL           TD  
Sbjct: 11  KSLFTINLDTTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRL--------ATDSP 70

Query: 150 MFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKYRRLP 209
             PE +         +  L K     V  +M   P+ + + S + +AA+L+  T    LP
Sbjct: 71  FLPENN---------EDRLEKLRLHKVSSIMKQNPVTIEDFSPVVEAAKLMRVTNVGGLP 130

Query: 210 VVDADGKLVGIITRGNVVRAALQI 234
           V+D  G+L+G++TR +++   +++
Sbjct: 131 VLDKKGRLIGMVTRSDLLDLLIKV 137

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BLAST of CmoCh02G005360.1 vs. TrEMBL
Match: A0A0A0LSY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.3e-107
Identity = 211/240 (87.92%), Postives = 218/240 (90.83%), Query Frame = 1


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 60
           MESIGCSLSSLSLA FRA SFSVQE+LFGPCRRPS PI+HASVA+SF        LRKST
Sbjct: 1   MESIGCSLSSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFPE------LRKST 60

Query: 61  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           SIAASGTLMANSVPS  GVY VGDFMTRKEELHVVKPTT+V+EALEILVEKRITGFPVID
Sbjct: 61  SIAASGTLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGG TD SMFPEVDS+WKTFNEVQ LLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           T  PLVVRE +DLED ARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIK AEENR
Sbjct: 181 TTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

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BLAST of CmoCh02G005360.1 vs. TrEMBL
Match: F6H4H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.5e-83
Identity = 170/213 (79.81%), Postives = 188/213 (88.26%), Query Frame = 1


Query: 26  LLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDF 85
           LLF P R+P    V ++V    S S R +G+R+S ++AA+GTLMANSVPS NGVYTVGDF
Sbjct: 38  LLFQPGRKPP---VGSTVG---SRSERISGIRRSPALAAAGTLMANSVPSKNGVYTVGDF 97

Query: 86  MTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGT 145
           MTRKE+LHVVK TTTVEEALEILVE RITGFPVIDD+WKLVG+VSDYDLLALDSISGGG 
Sbjct: 98  MTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGL 157

Query: 146 TDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKY 205
           TD  MFPEVDSTWKTFNE+Q LLSKTNGKVVGDLMTP P+VVRE ++LEDAARLLL+TKY
Sbjct: 158 TDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKY 217

Query: 206 RRLPVVDADGKLVGIITRGNVVRAALQIKRAEE 239
           RRLPVVD+DGKLVGIITRGNVVRAALQIKRA E
Sbjct: 218 RRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 244

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BLAST of CmoCh02G005360.1 vs. TrEMBL
Match: A0A067GUY1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.5e-80
Identity = 170/238 (71.43%), Postives = 191/238 (80.25%), Query Frame = 1


Query: 10  SLSLAQFRA---------TSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 69
           S+S+A+ RA         TSF++Q     PC   S P        + S+  R + LR+S+
Sbjct: 9   SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSD-RVSALRRSS 68

Query: 70  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 129
           ++ ASGTL ANS   S+GVYTVGDFMT KEELHVVKPTTTV+EALEILVEKRITGFPVID
Sbjct: 69  AVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID 128

Query: 130 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 189
           D+WKLVG+VSDYDLLALDSISG G  D SMFPEVDSTWKTFNEVQ LLSKTNGK+VGDLM
Sbjct: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188

Query: 190 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEE 239
           TP P+VVRE ++LEDAARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIK A E
Sbjct: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241

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BLAST of CmoCh02G005360.1 vs. TrEMBL
Match: V4UIP6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 7.8e-80
Identity = 170/238 (71.43%), Postives = 190/238 (79.83%), Query Frame = 1


Query: 10  SLSLAQFRA---------TSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 69
           S+S+A+ RA         TSF++Q     PC   S P        + S+  R + LR+S+
Sbjct: 9   SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSD-RVSALRRSS 68

Query: 70  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 129
            + ASGTL ANS   S+GVYTVGDFMT KEELHVVKPTTTV+EALEILVEKRITGFPVID
Sbjct: 69  VVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID 128

Query: 130 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 189
           D+WKLVG+VSDYDLLALDSISG G  D SMFPEVDSTWKTFNEVQ LLSKTNGK+VGDLM
Sbjct: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188

Query: 190 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEE 239
           TP P+VVRE ++LEDAARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIK A E
Sbjct: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241

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BLAST of CmoCh02G005360.1 vs. TrEMBL
Match: A0A067GUL0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78
Identity = 170/243 (69.96%), Postives = 191/243 (78.60%), Query Frame = 1


Query: 10  SLSLAQFRA---------TSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 69
           S+S+A+ RA         TSF++Q     PC   S P        + S+  R + LR+S+
Sbjct: 9   SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSD-RVSALRRSS 68

Query: 70  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEA-----LEILVEKRITG 129
           ++ ASGTL ANS   S+GVYTVGDFMT KEELHVVKPTTTV+EA     LEILVEKRITG
Sbjct: 69  AVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAFVPTALEILVEKRITG 128

Query: 130 FPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKV 189
           FPVIDD+WKLVG+VSDYDLLALDSISG G  D SMFPEVDSTWKTFNEVQ LLSKTNGK+
Sbjct: 129 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 188

Query: 190 VGDLMTPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKR 239
           VGDLMTP P+VVRE ++LEDAARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIK 
Sbjct: 189 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKH 246

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BLAST of CmoCh02G005360.1 vs. TAIR10
Match: AT4G36910.1 (AT4G36910.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 284.3 bits (726), Expect = 7.2e-77
Identity = 154/226 (68.14%), Postives = 176/226 (77.88%), Query Frame = 1


Query: 11  LSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMA 70
           LS    RA+S      L  P      P    + +RSF +  R      S S AA  TLM 
Sbjct: 10  LSFTPLRASSSPSSPYLLLPRFLSVQPCHKFTFSRSFPSKSRIP----SASSAAGSTLMT 69

Query: 71  NSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVS 130
           NS    +GVYTVG+FMT+KE+LHVVKPTTTV+EALE+LVE RITGFPVID++WKLVG+VS
Sbjct: 70  NSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVS 129

Query: 131 DYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVREN 190
           DYDLLALDSISG G T+ SMFPEVDSTWKTFN VQ LLSKTNGK+VGDLMTP PLVV E 
Sbjct: 130 DYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEK 189

Query: 191 SDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRA 237
           ++LEDAA++LL+TKYRRLPVVD+DGKLVGIITRGNVVRAALQIKR+
Sbjct: 190 TNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRS 231

[Close]

BLAST of CmoCh02G005360.1 vs. TAIR10
Match: AT4G34120.1 (AT4G34120.1 Cystathionine beta-synthase (CBS) family protein)

HSP 1 Score: 265.0 bits (676), Expect = 4.5e-71
Identity = 142/206 (68.93%), Postives = 165/206 (80.10%), Query Frame = 1


Query: 46  SFSTSCRSTGLRKST---SIAASGTLMA-------NSVPSSNGVYTVGDFMTRKEELHVV 105
           SFS    S   R ST   SI  S    A       NSVP+ NG YTVGDFMT ++ LHVV
Sbjct: 33  SFSLLPLSNRRRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVV 92

Query: 106 KPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVD 165
           KP+T+V++ALE+LVEK++TG PVIDDNW LVGVVSDYDLLALDSISG    D ++FP+VD
Sbjct: 93  KPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVD 152

Query: 166 STWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADG 225
           STWKTFNE+Q L+SKT GKVVGDLMTP PLVVR++++LEDAARLLL+TK+RRLPVVDADG
Sbjct: 153 STWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADG 212

Query: 226 KLVGIITRGNVVRAALQIKRAEENRT 242
           KL+GI+TRGNVVRAALQIKR  EN T
Sbjct: 213 KLIGILTRGNVVRAALQIKRETENST 238

[Close]

BLAST of CmoCh02G005360.1 vs. NCBI nr
Match: gi|449443418|ref|XP_004139474.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 396.0 bits (1016), Expect = 4.8e-107
Identity = 211/240 (87.92%), Postives = 218/240 (90.83%), Query Frame = 1


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 60
           MESIGCSLSSLSLA FRA SFSVQE+LFGPCRRPS PI+HASVA+SF        LRKST
Sbjct: 1   MESIGCSLSSLSLAPFRAKSFSVQEMLFGPCRRPSLPILHASVAQSFPE------LRKST 60

Query: 61  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           SIAASGTLMANSVPS  GVY VGDFMTRKEELHVVKPTT+V+EALEILVEKRITGFPVID
Sbjct: 61  SIAASGTLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGG TD SMFPEVDS+WKTFNEVQ LLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           T  PLVVRE +DLED ARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIK AEENR
Sbjct: 181 TTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

[Close]

BLAST of CmoCh02G005360.1 vs. NCBI nr
Match: gi|659071762|ref|XP_008461810.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 1.0e-104
Identity = 208/240 (86.67%), Postives = 216/240 (90.00%), Query Frame = 1


Query: 1   MESIGCSLSSLSLAQFRATSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 60
           MESI CSLSSLSLA  RA SFSVQE+LFGPCRR S PI+HASVA+SF        LRKST
Sbjct: 1   MESIVCSLSSLSLAHLRAKSFSVQEMLFGPCRRLSLPILHASVAQSFPE------LRKST 60

Query: 61  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 120
           S+AASGTLMANSVPS  GVYTVGDFMTRKEELHVVKPTT+V+EALEILVEKRITGFPVID
Sbjct: 61  SLAASGTLMANSVPSGTGVYTVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVID 120

Query: 121 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 180
           DNWKLVGVVSDYDLLALDSISGGG TD SMFPEVDS+WKTFNEVQ LLSKTNGKVVGDLM
Sbjct: 121 DNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLM 180

Query: 181 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEENR 240
           T  PLVVRE +DLED ARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIK AEENR
Sbjct: 181 TTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENR 234

[Close]

BLAST of CmoCh02G005360.1 vs. NCBI nr
Match: gi|225438783|ref|XP_002283079.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera])

HSP 1 Score: 317.4 bits (812), Expect = 2.2e-83
Identity = 170/213 (79.81%), Postives = 188/213 (88.26%), Query Frame = 1


Query: 26  LLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKSTSIAASGTLMANSVPSSNGVYTVGDF 85
           LLF P R+P    V ++V    S S R +G+R+S ++AA+GTLMANSVPS NGVYTVGDF
Sbjct: 38  LLFQPGRKPP---VGSTVG---SRSERISGIRRSPALAAAGTLMANSVPSKNGVYTVGDF 97

Query: 86  MTRKEELHVVKPTTTVEEALEILVEKRITGFPVIDDNWKLVGVVSDYDLLALDSISGGGT 145
           MTRKE+LHVVK TTTVEEALEILVE RITGFPVIDD+WKLVG+VSDYDLLALDSISGGG 
Sbjct: 98  MTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGL 157

Query: 146 TDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLMTPVPLVVRENSDLEDAARLLLQTKY 205
           TD  MFPEVDSTWKTFNE+Q LLSKTNGKVVGDLMTP P+VVRE ++LEDAARLLL+TKY
Sbjct: 158 TDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKY 217

Query: 206 RRLPVVDADGKLVGIITRGNVVRAALQIKRAEE 239
           RRLPVVD+DGKLVGIITRGNVVRAALQIKRA E
Sbjct: 218 RRLPVVDSDGKLVGIITRGNVVRAALQIKRAVE 244

[Close]

BLAST of CmoCh02G005360.1 vs. NCBI nr
Match: gi|641860427|gb|KDO79116.1| (hypothetical protein CISIN_1g025613mg [Citrus sinensis])

HSP 1 Score: 306.2 bits (783), Expect = 5.0e-80
Identity = 170/238 (71.43%), Postives = 191/238 (80.25%), Query Frame = 1


Query: 10  SLSLAQFRA---------TSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 69
           S+S+A+ RA         TSF++Q     PC   S P        + S+  R + LR+S+
Sbjct: 9   SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSD-RVSALRRSS 68

Query: 70  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 129
           ++ ASGTL ANS   S+GVYTVGDFMT KEELHVVKPTTTV+EALEILVEKRITGFPVID
Sbjct: 69  AVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID 128

Query: 130 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 189
           D+WKLVG+VSDYDLLALDSISG G  D SMFPEVDSTWKTFNEVQ LLSKTNGK+VGDLM
Sbjct: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188

Query: 190 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEE 239
           TP P+VVRE ++LEDAARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIK A E
Sbjct: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241

[Close]

BLAST of CmoCh02G005360.1 vs. NCBI nr
Match: gi|568883420|ref|XP_006494468.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 306.2 bits (783), Expect = 5.0e-80
Identity = 170/238 (71.43%), Postives = 191/238 (80.25%), Query Frame = 1


Query: 10  SLSLAQFRA---------TSFSVQELLFGPCRRPSSPIVHASVARSFSTSCRSTGLRKST 69
           S+S+A+ RA         TSF++Q     PC   S P        + S+  R + LR+S+
Sbjct: 9   SISVARLRAPAAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSD-RVSALRRSS 68

Query: 70  SIAASGTLMANSVPSSNGVYTVGDFMTRKEELHVVKPTTTVEEALEILVEKRITGFPVID 129
           ++ ASGTL ANS   S+GVYTVGDFMT KEELHVVKPTTTV+EALEILVEKRITGFPVID
Sbjct: 69  AVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID 128

Query: 130 DNWKLVGVVSDYDLLALDSISGGGTTDGSMFPEVDSTWKTFNEVQSLLSKTNGKVVGDLM 189
           D+WKLVG+VSDYDLLALDSISG G  D SMFPEVDSTWKTFNEVQ LLSKTNGK+VGDLM
Sbjct: 129 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLM 188

Query: 190 TPVPLVVRENSDLEDAARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAEE 239
           TP P+VVRE ++LEDAARLLL+TKYRRLPVVDADGKLVGIITRGNVVRAALQIK A E
Sbjct: 189 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKHATE 241

The following BLAST results are available for this feature:

BLAST of CmoCh02G005360.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CBSX1_ARATH	1.3e-75	68.14	CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CB...	[more]
CBSX2_ARATH	8.0e-70	68.93	CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CB...	[more]
Y1426_METJA	5.5e-10	26.90	Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii (strain ATCC 430...	[more]
IMDH_AQUAE	3.0e-08	28.15	Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain VF5) GN=guaB ...	[more]
Y8960_DICDI	1.5e-07	26.39	CBS domain-containing protein DDB_G0289609 OS=Dictyostelium discoideum GN=DDB_G0...	[more]

BLAST of CmoCh02G005360.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSY7_CUCSA	3.3e-107	87.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1	[more]
F6H4H6_VITVI	1.5e-83	79.81	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=...	[more]
A0A067GUY1_CITSI	3.5e-80	71.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1	[more]
V4UIP6_9ROSI	7.8e-80	71.43	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1	[more]
A0A067GUL0_CITSI	2.5e-78	69.96	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1	[more]

BLAST of CmoCh02G005360.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36910.1	7.2e-77	68.14	Cystathionine beta-synthase (CBS) family protein	[more]
AT4G34120.1	4.5e-71	68.93	Cystathionine beta-synthase (CBS) family protein	[more]

BLAST of CmoCh02G005360.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443418\|ref\|XP_004139474.1\|	4.8e-107	87.92	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sati...	[more]
gi\|659071762\|ref\|XP_008461810.1\|	1.0e-104	86.67	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo...	[more]
gi\|225438783\|ref\|XP_002283079.1\|	2.2e-83	79.81	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera]	[more]
gi\|641860427\|gb\|KDO79116.1\|	5.0e-80	71.43	hypothetical protein CISIN_1g025613mg [Citrus sinensis]	[more]
gi\|568883420\|ref\|XP_006494468.1\|	5.0e-80	71.43	PREDICTED: CBS domain-containing protein CBSX1, chloroplastic isoform X1 [Citrus...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000644	CBS_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G005360	CmoCh02G005360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005360.1	CmoCh02G005360.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005360.1.exon.8	CmoCh02G005360.1.exon.8	exon
CmoCh02G005360.1.exon.7	CmoCh02G005360.1.exon.7	exon
CmoCh02G005360.1.exon.6	CmoCh02G005360.1.exon.6	exon
CmoCh02G005360.1.exon.5	CmoCh02G005360.1.exon.5	exon
CmoCh02G005360.1.exon.4	CmoCh02G005360.1.exon.4	exon
CmoCh02G005360.1.exon.3	CmoCh02G005360.1.exon.3	exon
CmoCh02G005360.1.exon.2	CmoCh02G005360.1.exon.2	exon
CmoCh02G005360.1.exon.1	CmoCh02G005360.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005360.1.five_prime_UTR.1	CmoCh02G005360.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005360.1.CDS.1	CmoCh02G005360.1.CDS.1	CDS
CmoCh02G005360.1.CDS.2	CmoCh02G005360.1.CDS.2	CDS
CmoCh02G005360.1.CDS.3	CmoCh02G005360.1.CDS.3	CDS
CmoCh02G005360.1.CDS.4	CmoCh02G005360.1.CDS.4	CDS
CmoCh02G005360.1.CDS.5	CmoCh02G005360.1.CDS.5	CDS
CmoCh02G005360.1.CDS.6	CmoCh02G005360.1.CDS.6	CDS
CmoCh02G005360.1.CDS.7	CmoCh02G005360.1.CDS.7	CDS
CmoCh02G005360.1.CDS.8	CmoCh02G005360.1.CDS.8	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G005360.1.three_prime_UTR.1	CmoCh02G005360.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 82..136 score: 7.4E-15coord: 176..229 score: 3.1
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 183..231 score: 2.6E-12coord: 91..139 score: 1.
IPR000644	CBS domain	PROFILE	PS51371	CBS	coord: 86..146 score: 13.475coord: 180..237 score: 14
None	No IPR available	GENE3D	G3DSA:3.10.580.10		coord: 80..235 score: 2.8
None	No IPR available	PANTHER	PTHR11911	INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED	coord: 68..240 score: 1.1E
None	No IPR available	PANTHER	PTHR11911:SF109	SUBFAMILY NOT NAMED	coord: 68..240 score: 1.1E
None	No IPR available	unknown	SSF54631	CBS-domain pair	coord: 79..229 score: 2.83