CmoCh02G002880.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G002880.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPhosphoglycerate mutase family protein
LocationCmo_Chr02 : 1432377 .. 1436126 (-)
Sequence length866
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACGGCGCCTTTTCTACGCAACAGATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGTCTGTGACTATTTGATCTCTTGTTTTATTCTTCGTTTGCTGTTTGGCTTGTTAGAATATGGTGTTTTTCTTGGTTCTTGTCTGATTTTGATACGCTGTGGAGAATTTCTCACATAGTTCTTTTGGCCAAAGAATGATCGGACGGCCATTTGCGTGGTTTTGGATTGCTTTTCGCGAAATATATTTCAGAAATGACTGTTTTCTTTTTCTGTTCATGCGTGAAATGAATTGGGATGTTCGTTAATGCTGATTTTATGCTTCAAATTATGATGGATTTCACACTTTTCTGCTTGAATTTGTGTGATAGGACATGTTCCTGGAGTTTGATTTTACATTTTTCTGCTTGAATTTGTAGCGTTTCTTATCTGTGCTTGTGATAGGACATGTTCTTGGAGTTAGATTATACATTTTTCTGCTTGAATCTGTAGTGTTTCTTAAGGGTCTGTGCTTGTGATAGGACATGTTCTTGGAGTTTTTGCATGTCGGTTGATTGAGAAGAAGAATGAAGAACAGGCTAATTGACTGAGAGTTTGATTCTACTGTAGGAAAATGGTACCCTCCCTGAGTATCAACTGGCTTCTGAGGGTGTTGGACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGGTATTTTGTAATGTGTTTTTAGATTTGGGAAGCCTGTCTTTGGTTTGTAAGTTCATGATTTGTTGTCATAAGCAAACGGGCATAACGAATATGAGCCAAACATTTCAGAACAGGATTGTAATTCTTCTGAAAATCTTCACGAGTTAGTGAGTAGTGATGTCAAGAAGATTACAAAAAGGCTTTCCAATTAGAAATAATTTGTTCAAGATCATAGCTACAGAAAAAGAGACCTGACACCAAGAAGAGAGAAAGCTTGATAAGATCCCATAAGACATTAATACTCCTATGGAAGTTCTTTGGTTTCTTTTAAGGCAAATACACAACATGATAGCGACTAGCGAACTGAACCTGTGAAATCCCATATCGGTTGGATAAGGGTGTGGAAATCTCCCCCTAGCAGACATATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAAATGGGACAATATCTGCTAGCGGTGGGCTTGAGCTGTTACAAATGATATCACAGCTAGACACTGGGTGGTGTGCCAGCAAAGACGCTGAGCTCCAAAGAGGGGAGGGACACCGGGTAGTGTGCCAGCGAGAACGTTGGACCTCAAAGGGGGGTGGATTTGTGAGATCTCCACGTCGATTGGAGAGAGGAACGAGTGTCAGCAAGTAGGCCTTGGAGGGGGTGGATTATGAGATCCCACGTCAATTGGAGAGGGAAACGAGTATTAGCCCCAAATGGGGTGAACTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATAAGTGTGTGAAAACCTCTCCCTAACATATGCATTTTAAAAACCTTGAGGAGAAGCCCGAAAAAGATAATCCAAAGAGGATAATATCTGCTAACAGTGGGTTTAGGCTCTTGGCTTGAATGCCTTGTATCTAAGTCGACCGCAATCAGTCGTTGTCATTCTAGCTCAATCTCGATAATGAAAGTAATGATGCTATCTTAGATTCACTCGTTTTAATGGAAAATCTATATCACAAGTGCAGGAGTTGAAGGAAAATTCCATACCGCTCGAAAATGTTCGGATTTGCTATTCACCATTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCCCTGAATCTTCCATTTGAAAACCCTCCGTGTAAGGTAAAAGAACTGTTTTCTTTCCATTTGTGCTTCTGTGAAGAATCTGGTAGACCACTTTTCCGATTCAATATGTTCTTCATCTTCCTCCAACTGATCATTTGCAGATGATGAAAGATCTCAGGGAACGCTACTTTGGTCCTTCATTTGAGCTTTTGTCTCATGACAAAGTAAGATAACAGCCATTACTTGTTCTTGATTGTGTTTTTGCTGCCTTGAAAAGTTACAGTTCAGAATGTCTTGAGTTTTCAATTTCTTGGAAATATTAATGGTGATATCGGGGTTTAAGCCATGGTGGCCACTGAATAAGCACCAATAAGACAAGGAAACTAAGTCATAAGTTTATTATACTTAAACTAAGTGTTTGACACATGTCTAACAATAGGTAGCAAGTGTCCGATACGTGTCCAAAAGTGTGTCCAAGGGTCCAACACATTTTGGACACGCACATGCTAGCCAAACTAAAGTCCCTGTGTTTCTTAGGAGACCACCTTCTAGGATTTAATATCCTACGAGCTACCTTAGAAACTAAGCGTTGTAGTGTCAAATGGTTGTTCGGTAAGATTAGTCAAGGTGTATACAAGCTACTCGAACACTCACAGATATACGAGAATACAAAATAAGAATTTAGTGGGATGTAGCGTTTTAGTGGATCTGAAAGAGAAGCGGTAAGACTACTCTCATCTTATCTTCCTAGTTGATTTCGGCCTTTTCTATATCCCGTGGTAAAACATTGTTATTAGAGATTGCGAAGAAATTCACTGAAATCTTTGAATCTTTCATGCCATTTCAGCTGAGGCTTTGTTGATTTTGTGTTGGTTCATCTTAAACAGTATGCAGAAATCTGGGCTCTTGATGAGGAAGATCCATTCAAGCGGCCTGAAGGTGGAGAAAGCGTTGAAGATGTTGCTTCAAGATTAGCCAAAGCAGTGCTTCAAATGGAGTCACAATTTCAAGGGTATACCATATTTATATCCTCCTCTATCATAATCCTATCAATCAATCGTGAGATCACATCTCGAACCAAAGAGAAAAACGAAACATTCTTTGTAAGAGTGTGAAAACCTCTCTTAACATACGCTTTTTAAAAATCTTGAGGGAAAGTTCGAAAGGAAAAGTCCAAAGAGAACAATATTTACTAGCGATGAGCTTAGGTTGTTATAGATAATATCAGAATCAGACAGCAAGGACGCTGAATTCCAAAGGGGATAGACACTGGGTTGTGTGCCAGCGAGGACGTTGGACCTTGAAGGAGGTGGATTGTGAGATCTCACATCAATTGAAGAGGGGATCAAAGCATTCTTGATAAGGGTATGGAAACTGTGAGTGGAAGCTCGAAAAATCTCAAAGATGACGATATCTGTTGGTGGGTTTGGACTAAGACAAATATGTTCAGCTTGGATTAATCGAACACTATCGTCAACCTATACATAGTAAGATATATTAGAATCTCAATAGATACGACATTGTAGGTTCAAATTTTCATTAACTCAACTATTGGATCTTACGTTTTGCAGTTGCGCCGTCTTGGTGGTCAGCCATGGGGACCCTCTGCAAATTTTTCAGACGGTGATGGGAGCTGCCATGCATGAAAATGGATCGGGCTCCGATGAATTGGCATCGAGATTACAAGCTGCCATCACCAAGCCCATTCTCTCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAGCTTCGAGCTGTCGTTTGAATTCCGGCAACTCCTCGCCGGACCTAGTGAAGAAGATGTCCTTATTCTTCTTTTTACTTTTGAATTAATGTTTTTAATATATAAGAGATTGAATTTCAGATTTGGGCGGCAGAATAAAGTAATTATATTATTCCAACTTTTTAATTTCGTTTTTTTTTATAATTAATATTTTTGTTTGGGAG

mRNA sequence

ATGGCGACGGCGCCTTTTCTACGCAACAGATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGAAAATGGTACCCTCCCTGAGTATCAACTGGCTTCTGAGGGTGTTGGACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGGAGTTGAAGGAAAATTCCATACCGCTCGAAAATGTTCGGATTTGCTATTCACCATTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCCCTGAATCTTCCATTTGAAAACCCTCCGTGTAAGATGATGAAAGATCTCAGGGAACGCTACTTTGGTCCTTCATTTGAGCTTTTGTCTCATGACAAATATGCAGAAATCTGGGCTCTTGATGAGGAAGATCCATTCAAGCGGCCTGAAGGTGGAGAAAGCGTTGAAGATGTTGCTTCAAGATTAGCCAAAGCAGTGCTTCAAATGGAGTCACAATTTCAAGGTTGCGCCGTCTTGGTGGTCAGCCATGGGGACCCTCTGCAAATTTTTCAGACGGTGATGGGAGCTGCCATGCATGAAAATGGATCGGGCTCCGATGAATTGGCATCGAGATTACAAGCTGCCATCACCAAGCCCATTCTCTCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAGCTTCGAGCTGTCGTTTGAATTCCGGCAACTCCTCGCCGGACCTAGTGAAGAAGATGTCCTTATTCTTCTTTTTACTTTTGAATTAATGTTTTTAATATATAAGAGATTGAATTTCAGATTTGGGCGGCAGAATAAAGTAATTATATTATTCCAACTTTTTAATTTCGTTTTTTTTTATAATTAATATTTTTGTTTGGGAG

Coding sequence (CDS)

ATGGCGACGGCGCCTTTTCTACGCAACAGATATTGGATTCTCAGGCATGGCAAGAGCATTCCCAATGAGAAGGGCCTCATCGTTTCTTCTATAGAAAATGGTACCCTCCCTGAGTATCAACTGGCTTCTGAGGGTGTTGGACAGGCGCAGTTGGCTGGAGAACAATTCTTAAAGGAGTTGAAGGAAAATTCCATACCGCTCGAAAATGTTCGGATTTGCTATTCACCATTCTCAAGAACAATCCATACAGCTAAAGTGGCTGCATCTGCCCTGAATCTTCCATTTGAAAACCCTCCGTGTAAGATGATGAAAGATCTCAGGGAACGCTACTTTGGTCCTTCATTTGAGCTTTTGTCTCATGACAAATATGCAGAAATCTGGGCTCTTGATGAGGAAGATCCATTCAAGCGGCCTGAAGGTGGAGAAAGCGTTGAAGATGTTGCTTCAAGATTAGCCAAAGCAGTGCTTCAAATGGAGTCACAATTTCAAGGTTGCGCCGTCTTGGTGGTCAGCCATGGGGACCCTCTGCAAATTTTTCAGACGGTGATGGGAGCTGCCATGCATGAAAATGGATCGGGCTCCGATGAATTGGCATCGAGATTACAAGCTGCCATCACCAAGCCCATTCTCTCGCAGCACCGGAAATTTGCTCTGCTCACCGGAGAGCTTCGAGCTGTCGTTTGA
Homology
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BLAST of CmoCh02G002880.1 vs. TrEMBL
Match: A0A0A0KQV4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265820 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.2e-98
Identity = 184/228 (80.70%), Postives = 204/228 (89.47%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATA FLRNRYWILRHGKSIPNEKGLIVSS ENG LPEYQLA EGV QA+LAG QFLKEL
Sbjct: 35  MATASFLRNRYWILRHGKSIPNEKGLIVSSTENGILPEYQLAPEGVEQARLAGVQFLKEL 94

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KENSI LENVRICYSPFSRTIHTAKVAAS LNLPFE P CKM+++LRERYFGPSFELLSH
Sbjct: 95  KENSILLENVRICYSPFSRTIHTAKVAASVLNLPFEGPQCKMIENLRERYFGPSFELLSH 154

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWALDEED FKRPEGGESVEDVASRLAKA+L++ES FQGCA+LVVSHGDPLQI Q
Sbjct: 155 DKYEEIWALDEEDAFKRPEGGESVEDVASRLAKAILEIESLFQGCAILVVSHGDPLQIVQ 214

Query: 181 TVMGAAMHENGS-GSDELASRLQAAITKPILSQHRKFALLTGELRAVV 228
            +MG+   ++GS  S++L+S L+A +TKPILS HR+FALLTGELR ++
Sbjct: 215 AMMGSGGKQDGSTPSNDLSSMLEALMTKPILSNHRQFALLTGELRPLL 262

[Close]
BLAST of CmoCh02G002880.1 vs. TrEMBL
Match: A0A0B0MNP0_GOSAR (Agropine synthesis reductase OS=Gossypium arboreum GN=F383_26703 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.0e-93
Identity = 171/226 (75.66%), Postives = 193/226 (85.40%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MAT+ FLRNRYWILRHGKSIPNEKGLIVSS+ENG   EYQLASEGV QA+LAG+ FLKEL
Sbjct: 1   MATSSFLRNRYWILRHGKSIPNEKGLIVSSLENGIRLEYQLASEGVEQAELAGKLFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KEN IPLENVR+CYSPF+RT HTA+V AS LNLPFE P CK+M+DLRERYFGPSFELLSH
Sbjct: 61  KENDIPLENVRMCYSPFARTRHTAEVVASTLNLPFEGPQCKVMEDLRERYFGPSFELLSH 120

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWA+DE+DPF RPEGGESV+DVASRLA A+  MES++QGC +LVVSHGDPLQI Q
Sbjct: 121 DKYTEIWAMDEKDPFTRPEGGESVDDVASRLASAMATMESEYQGCTILVVSHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAV 227
           T++ AA  +     ++LASR+QA     ILSQHR FALLTGELRAV
Sbjct: 181 TILNAASKQMEPSCNDLASRIQAVRIPSILSQHRNFALLTGELRAV 226

[Close]
BLAST of CmoCh02G002880.1 vs. TrEMBL
Match: A0A0D2PMX0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.6e-93
Identity = 169/226 (74.78%), Postives = 194/226 (85.84%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MAT+ FLRNRYW+LRHGKSIPNEKGLIVSS+ENG   EYQLASEGV QA+LAG+ FLKEL
Sbjct: 1   MATSSFLRNRYWVLRHGKSIPNEKGLIVSSLENGIRLEYQLASEGVEQAELAGKLFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KEN IPLENVR+CYSPF+RT HTA+V AS LNLPFE P CK+M+DLRERYFGPSFELLSH
Sbjct: 61  KENDIPLENVRMCYSPFARTRHTAEVVASTLNLPFEGPQCKVMEDLRERYFGPSFELLSH 120

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWA+DE+DPF RPEGGESV+DVASRLA A+  MES+++GC +LVVSHGDPLQI Q
Sbjct: 121 DKYTEIWAMDEKDPFTRPEGGESVDDVASRLASAMATMESEYEGCTILVVSHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAV 227
           T++ AA  +     ++LASR+QA     ILSQHRKFALLTGE+RAV
Sbjct: 181 TILNAASKQMEPSCNDLASRIQAVRIPSILSQHRKFALLTGEIRAV 226

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BLAST of CmoCh02G002880.1 vs. TrEMBL
Match: A0A067FQ90_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027111mg PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 7.5e-93
Identity = 171/227 (75.33%), Postives = 189/227 (83.26%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MAT PFLRN+YW+LRHGKSIPNEKGLIVSS+ENGT  EYQLASEGV QA+LAGE FLKEL
Sbjct: 1   MATTPFLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
            EN+IPLENVRICYSPFSRT HTA+V AS LNLPFE P CK+M+DLRER+FGPSFELLSH
Sbjct: 61  NENNIPLENVRICYSPFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSH 120

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWALDE+DPF RPEGGESV DV SRLA A+  ME +FQGCA+LVVSHGDPLQI Q
Sbjct: 121 DKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAVV 228
           T++ A         D LASR++      ILSQHRK ALLTGELR+VV
Sbjct: 181 TLLNAVKQVTEPNCDNLASRIETVRVHNILSQHRKNALLTGELRSVV 227

[Close]
BLAST of CmoCh02G002880.1 vs. TrEMBL
Match: V4SFC7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029216mg PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 7.5e-93
Identity = 171/227 (75.33%), Postives = 189/227 (83.26%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MAT PFLRN+YW+LRHGKSIPNEKGLIVSS+ENGT  EYQLASEGV QA+LAGE FLKEL
Sbjct: 1   MATTPFLRNKYWVLRHGKSIPNEKGLIVSSLENGTRREYQLASEGVDQARLAGELFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
            EN+IPLENVRICYSPFSRT HTA+V AS LNLPFE P CK+M+DLRER+FGPSFELLSH
Sbjct: 61  NENNIPLENVRICYSPFSRTTHTAEVVASVLNLPFEGPQCKVMEDLRERFFGPSFELLSH 120

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWALDE+DPF RPEGGESV DV SRLA A+  ME +FQGCA+LVVSHGDPLQI Q
Sbjct: 121 DKYPEIWALDEKDPFMRPEGGESVNDVVSRLATAMAAMELEFQGCAILVVSHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAVV 228
           T++ A         D LASR++      ILSQHRK ALLTGELR+VV
Sbjct: 181 TLLNAVKQVTEPNCDNLASRIETVRVHNILSQHRKNALLTGELRSVV 227

[Close]
BLAST of CmoCh02G002880.1 vs. TAIR10
Match: AT4G38370.1 (AT4G38370.1 Phosphoglycerate mutase family protein)

HSP 1 Score: 311.2 bits (796), Expect = 5.2e-85
Identity = 148/219 (67.58%), Postives = 178/219 (81.28%), Query Frame = 1 

Query: 9   NRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKELKENSIPLE 68
           NRYW+LRHGKSIPNE+GL+VSS+ENG LPEYQLA +GV QA+LAGE FL++LKE++I L+
Sbjct: 10  NRYWVLRHGKSIPNERGLVVSSMENGVLPEYQLAPDGVAQARLAGESFLQQLKESNIELD 69

Query: 69  NVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSHDKYAEIWA 128
            VRICYSPFSRT HTA+V A  LNLPF+ P CKMM+DLRERYFGP+FEL SHDKY EIWA
Sbjct: 70  KVRICYSPFSRTTHTARVVAKVLNLPFDAPQCKMMEDLRERYFGPTFELKSHDKYPEIWA 129

Query: 129 LDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQTVMGAAMH 188
           LDE+DPF  PEGGES +DV SRLA A+  ME+++Q CA+LVVSHGDPLQ+ Q V  +A  
Sbjct: 130 LDEKDPFMGPEGGESADDVVSRLATAMKSMEAEYQRCAILVVSHGDPLQMLQNVFHSAKQ 189

Query: 189 ENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAVV 228
           + G G   LA + Q +    +LSQHRKFALLTGELR ++
Sbjct: 190 QEGDG---LAEKFQLSRVASVLSQHRKFALLTGELRPLI 225

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BLAST of CmoCh02G002880.1 vs. NCBI nr
Match: gi|659120509|ref|XP_008460226.1| (PREDICTED: uncharacterized protein LOC103499109 [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 7.7e-99
Identity = 183/225 (81.33%), Postives = 204/225 (90.67%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATA FLRNRYWILRHGKSIPNEKGLIVSSIENG LPEYQL  EGV QA+LAG QFLKEL
Sbjct: 19  MATASFLRNRYWILRHGKSIPNEKGLIVSSIENGILPEYQLDPEGVEQARLAGIQFLKEL 78

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KENSI LENVRICYSPFSRTIHTAKVAAS LNLPFE+P CKM+++LRERYFGPSFEL SH
Sbjct: 79  KENSILLENVRICYSPFSRTIHTAKVAASVLNLPFEDPQCKMIENLRERYFGPSFELSSH 138

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           +KY +IWALDEEDPFKRPEGGESVEDVASRLA+A+L++ES FQGCA+LVVSHGDPLQIFQ
Sbjct: 139 EKYEDIWALDEEDPFKRPEGGESVEDVASRLAQAILEIESLFQGCAILVVSHGDPLQIFQ 198

Query: 181 TVMGAAMHENGS-GSDELASRLQAAITKPILSQHRKFALLTGELR 225
            +MG+A  ++GS  S++L+S  QA ITKP+LS HR+FALLTGELR
Sbjct: 199 AMMGSAAKQDGSTSSNDLSSIFQALITKPVLSNHRQFALLTGELR 243

[Close]
BLAST of CmoCh02G002880.1 vs. NCBI nr
Match: gi|449445284|ref|XP_004140403.1| (PREDICTED: uncharacterized protein LOC101220672 isoform X1 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.7e-98
Identity = 184/228 (80.70%), Postives = 204/228 (89.47%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATA FLRNRYWILRHGKSIPNEKGLIVSS ENG LPEYQLA EGV QA+LAG QFLKEL
Sbjct: 1   MATASFLRNRYWILRHGKSIPNEKGLIVSSTENGILPEYQLAPEGVEQARLAGVQFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KENSI LENVRICYSPFSRTIHTAKVAAS LNLPFE P CKM+++LRERYFGPSFELLSH
Sbjct: 61  KENSILLENVRICYSPFSRTIHTAKVAASVLNLPFEGPQCKMIENLRERYFGPSFELLSH 120

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWALDEED FKRPEGGESVEDVASRLAKA+L++ES FQGCA+LVVSHGDPLQI Q
Sbjct: 121 DKYEEIWALDEEDAFKRPEGGESVEDVASRLAKAILEIESLFQGCAILVVSHGDPLQIVQ 180

Query: 181 TVMGAAMHENGS-GSDELASRLQAAITKPILSQHRKFALLTGELRAVV 228
            +MG+   ++GS  S++L+S L+A +TKPILS HR+FALLTGELR ++
Sbjct: 181 AMMGSGGKQDGSTPSNDLSSMLEALMTKPILSNHRQFALLTGELRPLL 228

[Close]
BLAST of CmoCh02G002880.1 vs. NCBI nr
Match: gi|700195625|gb|KGN50802.1| (hypothetical protein Csa_5G265820 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.7e-98
Identity = 184/228 (80.70%), Postives = 204/228 (89.47%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MATA FLRNRYWILRHGKSIPNEKGLIVSS ENG LPEYQLA EGV QA+LAG QFLKEL
Sbjct: 35  MATASFLRNRYWILRHGKSIPNEKGLIVSSTENGILPEYQLAPEGVEQARLAGVQFLKEL 94

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KENSI LENVRICYSPFSRTIHTAKVAAS LNLPFE P CKM+++LRERYFGPSFELLSH
Sbjct: 95  KENSILLENVRICYSPFSRTIHTAKVAASVLNLPFEGPQCKMIENLRERYFGPSFELLSH 154

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWALDEED FKRPEGGESVEDVASRLAKA+L++ES FQGCA+LVVSHGDPLQI Q
Sbjct: 155 DKYEEIWALDEEDAFKRPEGGESVEDVASRLAKAILEIESLFQGCAILVVSHGDPLQIVQ 214

Query: 181 TVMGAAMHENGS-GSDELASRLQAAITKPILSQHRKFALLTGELRAVV 228
            +MG+   ++GS  S++L+S L+A +TKPILS HR+FALLTGELR ++
Sbjct: 215 AMMGSGGKQDGSTPSNDLSSMLEALMTKPILSNHRQFALLTGELRPLL 262

[Close]
BLAST of CmoCh02G002880.1 vs. NCBI nr
Match: gi|728820354|gb|KHG03718.1| (Agropine synthesis reductase [Gossypium arboreum])

HSP 1 Score: 350.1 bits (897), Expect = 2.8e-93
Identity = 171/226 (75.66%), Postives = 193/226 (85.40%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MAT+ FLRNRYWILRHGKSIPNEKGLIVSS+ENG   EYQLASEGV QA+LAG+ FLKEL
Sbjct: 1   MATSSFLRNRYWILRHGKSIPNEKGLIVSSLENGIRLEYQLASEGVEQAELAGKLFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KEN IPLENVR+CYSPF+RT HTA+V AS LNLPFE P CK+M+DLRERYFGPSFELLSH
Sbjct: 61  KENDIPLENVRMCYSPFARTRHTAEVVASTLNLPFEGPQCKVMEDLRERYFGPSFELLSH 120

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWA+DE+DPF RPEGGESV+DVASRLA A+  MES++QGC +LVVSHGDPLQI Q
Sbjct: 121 DKYTEIWAMDEKDPFTRPEGGESVDDVASRLASAMATMESEYQGCTILVVSHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAV 227
           T++ AA  +     ++LASR+QA     ILSQHR FALLTGELRAV
Sbjct: 181 TILNAASKQMEPSCNDLASRIQAVRIPSILSQHRNFALLTGELRAV 226

[Close]
BLAST of CmoCh02G002880.1 vs. NCBI nr
Match: gi|823204322|ref|XP_012436435.1| (PREDICTED: metal-independent phosphoserine phosphatase isoform X1 [Gossypium raimondii])

HSP 1 Score: 349.7 bits (896), Expect = 3.7e-93
Identity = 169/226 (74.78%), Postives = 194/226 (85.84%), Query Frame = 1 

Query: 1   MATAPFLRNRYWILRHGKSIPNEKGLIVSSIENGTLPEYQLASEGVGQAQLAGEQFLKEL 60
           MAT+ FLRNRYW+LRHGKSIPNEKGLIVSS+ENG   EYQLASEGV QA+LAG+ FLKEL
Sbjct: 1   MATSSFLRNRYWVLRHGKSIPNEKGLIVSSLENGIRLEYQLASEGVEQAELAGKLFLKEL 60

Query: 61  KENSIPLENVRICYSPFSRTIHTAKVAASALNLPFENPPCKMMKDLRERYFGPSFELLSH 120
           KEN IPLENVR+CYSPF+RT HTA+V AS LNLPFE P CK+M+DLRERYFGPSFELLSH
Sbjct: 61  KENDIPLENVRMCYSPFARTRHTAEVVASTLNLPFEGPQCKVMEDLRERYFGPSFELLSH 120

Query: 121 DKYAEIWALDEEDPFKRPEGGESVEDVASRLAKAVLQMESQFQGCAVLVVSHGDPLQIFQ 180
           DKY EIWA+DE+DPF RPEGGESV+DVASRLA A+  MES+++GC +LVVSHGDPLQI Q
Sbjct: 121 DKYTEIWAMDEKDPFTRPEGGESVDDVASRLASAMATMESEYEGCTILVVSHGDPLQILQ 180

Query: 181 TVMGAAMHENGSGSDELASRLQAAITKPILSQHRKFALLTGELRAV 227
           T++ AA  +     ++LASR+QA     ILSQHRKFALLTGE+RAV
Sbjct: 181 TILNAASKQMEPSCNDLASRIQAVRIPSILSQHRKFALLTGEIRAV 226

The following BLAST results are available for this feature:
BLAST of CmoCh02G002880.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh02G002880.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQV4_CUCSA1.2e-9880.70Uncharacterized protein OS=Cucumis sativus GN=Csa_5G265820 PE=4 SV=1[more]
A0A0B0MNP0_GOSAR2.0e-9375.66Agropine synthesis reductase OS=Gossypium arboreum GN=F383_26703 PE=4 SV=1[more]
A0A0D2PMX0_GOSRA2.6e-9374.78Uncharacterized protein OS=Gossypium raimondii GN=B456_008G040700 PE=4 SV=1[more]
A0A067FQ90_CITSI7.5e-9375.33Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027111mg PE=4 SV=1[more]
V4SFC7_9ROSI7.5e-9375.33Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029216mg PE=4 SV=1[more]
BLAST of CmoCh02G002880.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38370.15.2e-8567.58 Phosphoglycerate mutase family protein[more]
BLAST of CmoCh02G002880.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120509|ref|XP_008460226.1|7.7e-9981.33PREDICTED: uncharacterized protein LOC103499109 [Cucumis melo][more]
gi|449445284|ref|XP_004140403.1|1.7e-9880.70PREDICTED: uncharacterized protein LOC101220672 isoform X1 [Cucumis sativus][more]
gi|700195625|gb|KGN50802.1|1.7e-9880.70hypothetical protein Csa_5G265820 [Cucumis sativus][more]
gi|728820354|gb|KHG03718.1|2.8e-9375.66Agropine synthesis reductase [Gossypium arboreum][more]
gi|823204322|ref|XP_012436435.1|3.7e-9374.78PREDICTED: metal-independent phosphoserine phosphatase isoform X1 [Gossypium rai... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013078His_Pase_superF_clade-1
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh02G002880CmoCh02G002880gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh02G002880.1CmoCh02G002880.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh02G002880.1.three_prime_UTR.1CmoCh02G002880.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh02G002880.1.CDS.6CmoCh02G002880.1.CDS.6CDS
CmoCh02G002880.1.CDS.5CmoCh02G002880.1.CDS.5CDS
CmoCh02G002880.1.CDS.4CmoCh02G002880.1.CDS.4CDS
CmoCh02G002880.1.CDS.3CmoCh02G002880.1.CDS.3CDS
CmoCh02G002880.1.CDS.2CmoCh02G002880.1.CDS.2CDS
CmoCh02G002880.1.CDS.1CmoCh02G002880.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh02G002880.1.exon.6CmoCh02G002880.1.exon.6exon
CmoCh02G002880.1.exon.5CmoCh02G002880.1.exon.5exon
CmoCh02G002880.1.exon.4CmoCh02G002880.1.exon.4exon
CmoCh02G002880.1.exon.3CmoCh02G002880.1.exon.3exon
CmoCh02G002880.1.exon.2CmoCh02G002880.1.exon.2exon
CmoCh02G002880.1.exon.1CmoCh02G002880.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013078Histidine phosphatase superfamily, clade-1PFAMPF00300His_Phos_1coord: 12..179
score: 6.9
IPR013078Histidine phosphatase superfamily, clade-1SMARTSM00855PGAM_5coord: 10..179
score: 3.
NoneNo IPR availablePANTHERPTHR23029PHOSPHOGLYCERATE MUTASEcoord: 1..183
score: 1.6
NoneNo IPR availablePANTHERPTHR23029:SF36PHOSPHOGLYCERATE MUTASE-LIKE PROTEINcoord: 1..183
score: 1.6