CmoCh02G001520.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G001520.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Early nodulin 20, putative
Location	Cmo_Chr02 : 743802 .. 744977 (-)
Sequence length	945

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGCCATCTCTGCTTGAAGATGGCAGCTTCAAGAACGTTAATGGCGTTGGCAATTGCAGCTACATTGGTGGTTGAATTAGCTATGGCGGCGAATTATACAGTCGGAGATTCAGATGGCTGGGAAATAGGCACCGACGTGCAGTCGTGGGCTGCATCCAAAAACTTCACTGTTGGAGATGTTATCAGTTAGTACTCTACATATCTTCTTATTATTGTAACCGTCTAAGTCCACTGTTAGCAAATATGGTCAGTTTTGGTAGTCTATTAGTGTCACACCTCTCCGATCATTAGTGTCACACCTCTCCGATGGTGATACGTAATAAGCCTAAACGGACAATATTTGCTAGCGGTGGACTTGAGCGGTTAGATTTTGGCTGAATTCTGGTGTGAGTAGTTTGGGGTTGAATCATTGACAGGTTTTGTGTATTCGGCGAACCATGATGTGGTTGAAGTGAAAGAGGTGGATTTCGGGTCCTGTTCAGGTAGCAACCCCATTGAGAAGCACACCGGCGGCAACACAGCCATCACGCTTTCGACTGCAGGCAAAAGATTCTTCATTTGTGGGGTGCCTGGCCACTGCACTGCCGGAATGAAGGTTCAAATTGACACCCTTGCAGCTTCGTCACCGCCGCCTTCCTCCACGGATGCACCTCCGTCTCCACCACCGCATGCCACTCCATCTTCACCGCCACCTGCCTCACCACCGCCTTCCTCCAAGGATGCACCTCCGACCCCACCACCGATAGTCGCTCCATCTTCACCGCCGCCTGCTTCTCCTCCAAAATCTGCAACGAAGCCACCCACAAAGTCTCCTCTGGCTCCATCACCTGGTTCTAACGCAAGCCCACCAGCGCCGCCCTTTAAACCAACTCCACCATCATCAGCACCGACACCGGAGCCTCCAATCCCTCCATTTCCATTTGATCAGCCATTGATTCCCTCAGCAGCCCCCACAACTCCACCTCCGCCTCCTTCATCAGCTTACAAATGCAGCTTCATGGTTCATTTCTCTGTTGGATTCAGCTTTGTTGCCATAATTCTTTTGGCCCTCTGAAAATTTTTCATTTTCCGCATACATTTTCCTGTGATCCTACAATATTTTGTTCCAATGCTTTTACTCTACGGGGTTCTTATGAATAATAGGCCCTTTACCAGCTATCCATTTCAAAGTATCT

mRNA sequence

TCCGCCATCTCTGCTTGAAGATGGCAGCTTCAAGAACGTTAATGGCGTTGGCAATTGCAGCTACATTGGTGGTTGAATTAGCTATGGCGGCGAATTATACAGTCGGAGATTCAGATGGCTGGGAAATAGGCACCGACGTGCAGTCGTGGGCTGCATCCAAAAACTTCACTGTTGGAGATGTTATCAGTTTTGTGTATTCGGCGAACCATGATGTGGTTGAAGTGAAAGAGGTGGATTTCGGGTCCTGTTCAGGTAGCAACCCCATTGAGAAGCACACCGGCGGCAACACAGCCATCACGCTTTCGACTGCAGGCAAAAGATTCTTCATTTGTGGGGTGCCTGGCCACTGCACTGCCGGAATGAAGGTTCAAATTGACACCCTTGCAGCTTCGTCACCGCCGCCTTCCTCCACGGATGCACCTCCGTCTCCACCACCGCATGCCACTCCATCTTCACCGCCACCTGCCTCACCACCGCCTTCCTCCAAGGATGCACCTCCGACCCCACCACCGATAGTCGCTCCATCTTCACCGCCGCCTGCTTCTCCTCCAAAATCTGCAACGAAGCCACCCACAAAGTCTCCTCTGGCTCCATCACCTGGTTCTAACGCAAGCCCACCAGCGCCGCCCTTTAAACCAACTCCACCATCATCAGCACCGACACCGGAGCCTCCAATCCCTCCATTTCCATTTGATCAGCCATTGATTCCCTCAGCAGCCCCCACAACTCCACCTCCGCCTCCTTCATCAGCTTACAAATGCAGCTTCATGGTTCATTTCTCTGTTGGATTCAGCTTTGTTGCCATAATTCTTTTGGCCCTCTGAAAATTTTTCATTTTCCGCATACATTTTCCTGTGATCCTACAATATTTTGTTCCAATGCTTTTACTCTACGGGGTTCTTATGAATAATAGGCCCTTTACCAGCTATCCATTTCAAAGTATCT

Coding sequence (CDS)

ATGGCAGCTTCAAGAACGTTAATGGCGTTGGCAATTGCAGCTACATTGGTGGTTGAATTAGCTATGGCGGCGAATTATACAGTCGGAGATTCAGATGGCTGGGAAATAGGCACCGACGTGCAGTCGTGGGCTGCATCCAAAAACTTCACTGTTGGAGATGTTATCAGTTTTGTGTATTCGGCGAACCATGATGTGGTTGAAGTGAAAGAGGTGGATTTCGGGTCCTGTTCAGGTAGCAACCCCATTGAGAAGCACACCGGCGGCAACACAGCCATCACGCTTTCGACTGCAGGCAAAAGATTCTTCATTTGTGGGGTGCCTGGCCACTGCACTGCCGGAATGAAGGTTCAAATTGACACCCTTGCAGCTTCGTCACCGCCGCCTTCCTCCACGGATGCACCTCCGTCTCCACCACCGCATGCCACTCCATCTTCACCGCCACCTGCCTCACCACCGCCTTCCTCCAAGGATGCACCTCCGACCCCACCACCGATAGTCGCTCCATCTTCACCGCCGCCTGCTTCTCCTCCAAAATCTGCAACGAAGCCACCCACAAAGTCTCCTCTGGCTCCATCACCTGGTTCTAACGCAAGCCCACCAGCGCCGCCCTTTAAACCAACTCCACCATCATCAGCACCGACACCGGAGCCTCCAATCCCTCCATTTCCATTTGATCAGCCATTGATTCCCTCAGCAGCCCCCACAACTCCACCTCCGCCTCCTTCATCAGCTTACAAATGCAGCTTCATGGTTCATTTCTCTGTTGGATTCAGCTTTGTTGCCATAATTCTTTTGGCCCTCTGA

Homology

[Close]

BLAST of CmoCh02G001520.1 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.8e-17
Identity = 81/203 (39.90%), Postives = 105/203 (51.72%), Query Frame = 1


Query: 8   MALAIAATLVVELA-----MAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVYSAN 67
           M   +AA L++ LA      AA + VGD  GW    D   W   K F VGD + FVY  +
Sbjct: 1   MGSTVAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS 60

Query: 68  HDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQIDTLA 127
           H V  V +  + +C  S   +    G+T I L+T G   F+C   GHC  GMK+ +  LA
Sbjct: 61  HSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLA 120

Query: 128 ASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPP-PIVAPS------SPPPAS 187
           A+ P PS+  +PPS P  +TPSSPP     PSS  +PP+PP P + PS      SPP   
Sbjct: 121 AA-PSPSTPSSPPSTP--STPSSPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPPTNG 180

Query: 188 PPKSATKPPTKSPLAPSPGSNAS 199
            P S T  P  +PL PS   NA+
Sbjct: 181 TPDSETLTPPPAPLPPSLSPNAA 200

[Close]

BLAST of CmoCh02G001520.1 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.7e-17
Identity = 75/177 (42.37%), Postives = 93/177 (52.54%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVEL-AMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVY 60
           MA S  L+   + A + + L ++A  YTVGD+ GW IG D  +WA+ K F VGD + F Y
Sbjct: 1   MAFSNALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNY 60

Query: 61  SAN-HDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQI 120
            A  H V EVKE D+ SC+  N I   + G T I L  AGK +FICGVPGH T GMK+ I
Sbjct: 61  GAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120

Query: 121 DTLAASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPAS 176
              A+S           S  P ATPSS    S  PSS D P        P+    +S
Sbjct: 121 KVKASSG---------SSAAPSATPSSSGKGS--PSSDDTPAATTTTTTPTKQNESS 166

[Close]

BLAST of CmoCh02G001520.1 vs. Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.3e-16
Identity = 69/181 (38.12%), Postives = 96/181 (53.04%), Query Frame = 1


Query: 8   MALAIAATLVVEL-----AMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVYSAN 67
           MA+A A  L++ L     A+A  YT+     W  G D   WA  K F VGD++ F Y ++
Sbjct: 9   MAVAAATALLLVLTIVPGAVAVTYTIE----WTTGVDYSGWATGKTFRVGDILEFKYGSS 68

Query: 68  HDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHC--TAGMKVQIDT 127
           H V  V +  +  C  S+  E H+ G+T I L T G  +FIC  PGHC    GMK+ ++ 
Sbjct: 69  HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNV 128

Query: 128 LAASSPPPSSTDAPPSPPPHATPSSP-PPASPPPSSKDAPPTPPPIVAPSSPPPASPPKS 181
           +A S+ PP++       PP +TP +P  P SPP      P TP P    +SPPP  PPK+
Sbjct: 129 VAGSAGPPAT-----PTPPSSTPGTPTTPESPPSGGSPTPTTPTPGAGSTSPPP--PPKA 178

[Close]

BLAST of CmoCh02G001520.1 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15
Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 23  AANYTVGDSDGWE--IGTDVQSWAASKNFTVGDVISFVYSAN-HDVVEVKEVDFGSCSGS 82
           A  + VGDS GW   +  D   WA+S  F VGD + F Y+   H+V++V +  F SC+ S
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 83  NPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQIDTLAASS 126
           +P   +T G  +I L   G  +F+CG+PGHC  G KV+I     SS
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDPGSS 106

[Close]

BLAST of CmoCh02G001520.1 vs. TrEMBL
Match: A0A0A0LN86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G423580 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.9e-85
Identity = 192/268 (71.64%), Postives = 213/268 (79.48%), Query Frame = 1


Query: 1   MAASRTL-MALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVY 60
           M ASRTL MALAIAAT+ VELAMA NYTVGDS GWEIG + Q+WA+SKNFT+GDV+ F Y
Sbjct: 1   MGASRTLIMALAIAATMAVELAMATNYTVGDSGGWEIGPNFQAWASSKNFTIGDVLIFEY 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
           S+NHDVVEV E DF SCS SNPIEKH GG+TAITL T+GKRFFICGVPGHC AGMKV+ID
Sbjct: 61  SSNHDVVEVNEPDFSSCSASNPIEKHIGGSTAITLLTSGKRFFICGVPGHCLAGMKVEID 120

Query: 121 TLAASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPASPPKS 180
           TLA  SPPPSS   PPSPPP  TPSSPPP S PP              P+SPPP+SPPK+
Sbjct: 121 TLANPSPPPSSIVMPPSPPPEETPSSPPPTSSPPD-------------PTSPPPSSPPKA 180

Query: 181 ATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPPFPFDQPLIPSAAPTTPPP 240
           +TKPP K P A  P S  SPP+PP +PTPPSSAPTPEPPIPPFPFDQPLIPSAAP  PPP
Sbjct: 181 STKPPAKPPQATPPDSKPSPPSPPTEPTPPSSAPTPEPPIPPFPFDQPLIPSAAP-KPPP 240

Query: 241 PPSSAYKCSFMVHFSVGFSFVAIILLAL 268
            PS AY+CSF +H S GF+FVAI++LAL
Sbjct: 241 RPSLAYRCSFRIHLSFGFTFVAIMILAL 254

[Close]

BLAST of CmoCh02G001520.1 vs. TrEMBL
Match: B9RPP5_RICCO (Early nodulin 20, putative OS=Ricinus communis GN=RCOM_1548050 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36
Identity = 128/272 (47.06%), Postives = 170/272 (62.50%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVELAMAANYTVGDSDG-WEIGTDVQSWAASKNFTVGDVISFVY 60
           MA  R +M+LA+ A L  ELAMAANYTVG S+G W+  T++Q+WAAS+ F+VGD + F Y
Sbjct: 1   MAILRNVMSLAVIAMLF-ELAMAANYTVGGSNGGWDTSTNLQAWAASQLFSVGDNLIFQY 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
            ANH++ EV + D+ SC  SN I+ H+ G+T I LS+ G R+FICG PGHCT GMKV+ID
Sbjct: 61  GANHNLFEVSQADYDSCQTSNAIQGHSDGSTVIPLSSPGTRYFICGTPGHCTQGMKVEID 120

Query: 121 TLAASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPASPPKS 180
            L +S+PPP++          ATP++PPP SP      A P  PP  +P SPPP SP  S
Sbjct: 121 VLPSSTPPPATP---------ATPATPPPTSPINPPPPATPATPPPASPISPPPPSP--S 180

Query: 181 ATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPP-----FPFDQPLI-PSAA 240
           +  PP+ S   PSP    S P+P    +PP ++PT  PP PP      P   P I PS  
Sbjct: 181 SVMPPSSS---PSP--TTSTPSP--SQSPPETSPTMSPPSPPTSPMGSPKSSPTISPSPD 240

Query: 241 PTTPPPPPSSAYKCSFMVHFSVGFSFVAIILL 266
            ++PPP PSSA K S   + +V FS V ++++
Sbjct: 241 VSSPPPSPSSANKASIRSNLTVSFSIVMMMMI 253

[Close]

BLAST of CmoCh02G001520.1 vs. TrEMBL
Match: V4TJV5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018339mg PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 113/251 (45.02%), Postives = 145/251 (57.77%), Query Frame = 1


Query: 22  MAANYTVGDSDG-WEIGTDVQSWAASKNFTVGDVISFVYSANHDVVEVKEVDFGSCSGSN 81
           MAANYTVG  +G W+  TD+++WA S+ F VGD + F Y ++HDV EV + D+ SC  SN
Sbjct: 1   MAANYTVGGPNGGWDTATDLRTWATSQKFLVGDNLIFQYPSSHDVTEVSKPDYDSCQTSN 60

Query: 82  PIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQIDTLAASSPPPSSTDAPP----- 141
            I+ +T GNT I LS+ GKR+FICG PGHCT GMKV+ID LA++SP P+S   PP     
Sbjct: 61  KIQSYTDGNTVIPLSSPGKRYFICGAPGHCTVGMKVEIDALASTSPAPASPSKPPQASLA 120

Query: 142 SPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPASPPKSATKPPTKSPLAPSPGS 201
           +P P A+  +PPPASP P +             SSP P   PKSA   PT SP +PS   
Sbjct: 121 APTPQASSKTPPPASPAPET-------------SSPSPEESPKSA---PTVSPASPSSSP 180

Query: 202 NASPPAPPFKPTPPSSAPTPEPPIPPFPFDQPLIPSAAPTTPPPPPSSAYKCSFMVHFSV 261
             SPP  P  PT  S + +P P               +  + PP PSSA K  F    ++
Sbjct: 181 LGSPPPSPDVPTADSPSTSPPP---------------SGLSQPPQPSSAAKVVFKTIMAM 220

Query: 262 GFSFVAIILLA 267
           GFSF  ++LLA
Sbjct: 241 GFSFGIMMLLA 220

[Close]

BLAST of CmoCh02G001520.1 vs. TrEMBL
Match: A0A067EXP9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043413mg PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.3e-31
Identity = 95/186 (51.08%), Postives = 124/186 (66.67%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVELAMAANYTVGDSDG-WEIGTDVQSWAASKNFTVGDVISFVY 60
           MA  RT + +A  A L+ +L+MAANYTVG  +G W+  TD+++WA S+ F VGD + F Y
Sbjct: 1   MAVLRTFICVAATAVLI-QLSMAANYTVGGPNGGWDTATDLRTWATSQKFLVGDNLIFQY 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
            ++HDV EV + D+ SC  SN I+ +T GNT I LS+ GKR+FICG PGHCT GMKV ID
Sbjct: 61  PSSHDVTEVSKPDYDSCQTSNKIKSYTDGNTVIPLSSPGKRYFICGAPGHCTVGMKVGID 120

Query: 121 TLAASSPPPSSTDAPP-----SPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPA 180
           TLA++SP P+S   PP     +P P A+  +PPPASP P +  +P +P P    SSP P 
Sbjct: 121 TLASTSPAPASPSKPPQASPVAPTPQASSKTPPPASPAPETSPSPASPAP--ETSSPSPE 180

[Close]

BLAST of CmoCh02G001520.1 vs. TrEMBL
Match: A0A061EAB7_THECC (Uclacyanin 1, putative OS=Theobroma cacao GN=TCM_007776 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30
Identity = 99/199 (49.75%), Postives = 132/199 (66.33%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVELAMAANYTVGDSDG-WEIGTDVQSWAASKNFTVGDVISFVY 60
           MA  RTL+ LA A  ++++LAMAANYTVG   G W+  TD+Q+W AS+ F VGD + F Y
Sbjct: 1   MAVLRTLVGLA-ATAMLIQLAMAANYTVGGPSGSWDSSTDLQTWVASQKFVVGDNLIFQY 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
           + NHDV+EV++ D+ SC  S+PI+ +  GNT I+LS+ GKR+FICG PGHC+ GM+++ID
Sbjct: 61  TPNHDVLEVRKADYDSCQTSSPIQTYNNGNTVISLSSPGKRYFICGTPGHCSQGMQIEID 120

Query: 121 TLAASSPPPSSTDAPP--SPPPHATPS---SPPPASPPPSSKDAPPTPPPIVAPS----S 180
           TLA S+PP +S   PP  SP P  +PS   SP  A   PSS D P T  P  +PS    S
Sbjct: 121 TLATSTPPATSPSTPPSASPAPETSPSPAKSPKSAPGSPSSPDVPSTESPGTSPSPSGLS 180

Query: 181 PPPASPPKSATKPPTKSPL 190
           PPP+  P SA +   ++ L
Sbjct: 181 PPPS--PSSANRSSFQTSL 196

[Close]

BLAST of CmoCh02G001520.1 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 62/157 (39.49%), Postives = 84/157 (53.50%), Query Frame = 1


Query: 2   AASRTLMALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVYSA 61
           AA+  L+ L + A   V    A  + VGD+DGW IG +  SW + K F VGD + F Y  
Sbjct: 5   AATALLLLLLLVA---VPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGP 64

Query: 62  NHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQIDTL 121
           +H V  V + D+  C  S P +  + G+T I L+  G   F+C  PGHC+ GMK+ +  L
Sbjct: 65  SHSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVL 124

Query: 122 AASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDA 159
           AA S  P  + + PSP P A   SP   SP PS  +A
Sbjct: 125 AAVSLEPPPSPSAPSPSPSAPSPSPSAPSPSPSPGNA 158

[Close]

BLAST of CmoCh02G001520.1 vs. TAIR10
Match: AT3G27200.1 (AT3G27200.1 Cupredoxin superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 5.8e-19
Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVYS 60
           M     L+ L  +  L V+ A+AA + +G S GWE   D  SW++ ++F VGD I F YS
Sbjct: 1   MKMQAVLVILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYS 60

Query: 61  ANHDVVEV-KEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
             H VVE+  E  + SC     +   + GN  + LS  G R+F CG  GHC  GMK++++
Sbjct: 61  ELHSVVELGSETAYKSCDLGTSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKVN 120

Query: 121 TLAASSPPPSS 131
            +++ S   SS
Sbjct: 121 VVSSDSKSASS 131

[Close]

BLAST of CmoCh02G001520.1 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 91.3 bits (225), Expect = 9.9e-19
Identity = 81/203 (39.90%), Postives = 105/203 (51.72%), Query Frame = 1


Query: 8   MALAIAATLVVELA-----MAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVYSAN 67
           M   +AA L++ LA      AA + VGD  GW    D   W   K F VGD + FVY  +
Sbjct: 1   MGSTVAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS 60

Query: 68  HDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQIDTLA 127
           H V  V +  + +C  S   +    G+T I L+T G   F+C   GHC  GMK+ +  LA
Sbjct: 61  HSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLA 120

Query: 128 ASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPP-PIVAPS------SPPPAS 187
           A+ P PS+  +PPS P  +TPSSPP     PSS  +PP+PP P + PS      SPP   
Sbjct: 121 AA-PSPSTPSSPPSTP--STPSSPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPPTNG 180

Query: 188 PPKSATKPPTKSPLAPSPGSNAS 199
            P S T  P  +PL PS   NA+
Sbjct: 181 TPDSETLTPPPAPLPPSLSPNAA 200

[Close]

BLAST of CmoCh02G001520.1 vs. TAIR10
Match: AT1G22480.1 (AT1G22480.1 Cupredoxin superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18
Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 1


Query: 6   TLMALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVYSANHDV 65
           TL+   +    +V  A +A+ TV     W +GTD       K F+VGD I F Y A H V
Sbjct: 3   TLLGCLVLIFSMVAQASSASLTVN----WSLGTDYTPLTTGKTFSVGDTIVFNYGAGHTV 62

Query: 66  VEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQIDTLAASS 125
            EV E D+ SC+  N I   + G T I L+T G R+FICG+PGHC AGMK+ +   + SS
Sbjct: 63  DEVSENDYKSCTLGNSITSDSSGTTTIALTTTGPRYFICGIPGHCAAGMKLAVTVASNSS 122

Query: 126 PPPSSTDAPPSP 138
              +     P+P
Sbjct: 123 NGVAGGTTTPTP 130

[Close]

BLAST of CmoCh02G001520.1 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 94/272 (34.56%), Postives = 145/272 (53.31%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVY- 60
           MA+   L+ +++ AT ++ L +A ++T+G   GW +G  +++WAA + F VGD + F Y 
Sbjct: 1   MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYP 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
           +A HDVVEV + +F SC    P+     GN+ + L+T GKR+FICG+PGHC+ GMK++++
Sbjct: 61  AAFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVN 120

Query: 121 TLAASSPPPSSTDAPPSPPPHATPS--SPPPASPPPSSKDAPPTPPPIVAPSSPPPASPP 180
            +      P++T AP +P P+  PS  +P P+S  P     P  P P+++PSS  P    
Sbjct: 121 VV------PTATVAPTAPLPNTVPSLNAPSPSSVLPIQPLLPLNPVPVLSPSSSTPLPSS 180

Query: 181 KSATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPPFPFDQ--PLIPSAAPT 240
                PP    L+P+  +  S P  P  P   SS+ T    +  FP          A   
Sbjct: 181 SLPLIPPLSPALSPATAAGTSLPLFPGSP-GSSSSTTSTKTVGTFPSSTTGTTADLAGAD 240

Query: 241 TPPPPPSSAYKCSFMVHFSVGFSFVAIILLAL 268
           +PP   SSA K        +GF F+  ++L L
Sbjct: 241 SPPADSSSAAKT-----LVLGFGFMVAMMLHL 260

[Close]

BLAST of CmoCh02G001520.1 vs. NCBI nr
Match: gi|449468329|ref|XP_004151874.1| (PREDICTED: blue copper protein-like [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-84
Identity = 192/268 (71.64%), Postives = 213/268 (79.48%), Query Frame = 1


Query: 1   MAASRTL-MALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVY 60
           M ASRTL MALAIAAT+ VELAMA NYTVGDS GWEIG + Q+WA+SKNFT+GDV+ F Y
Sbjct: 2   MGASRTLIMALAIAATMAVELAMATNYTVGDSGGWEIGPNFQAWASSKNFTIGDVLIFEY 61

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
           S+NHDVVEV E DF SCS SNPIEKH GG+TAITL T+GKRFFICGVPGHC AGMKV+ID
Sbjct: 62  SSNHDVVEVNEPDFSSCSASNPIEKHIGGSTAITLLTSGKRFFICGVPGHCLAGMKVEID 121

Query: 121 TLAASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPASPPKS 180
           TLA  SPPPSS   PPSPPP  TPSSPPP S PP              P+SPPP+SPPK+
Sbjct: 122 TLANPSPPPSSIVMPPSPPPEETPSSPPPTSSPPD-------------PTSPPPSSPPKA 181

Query: 181 ATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPPFPFDQPLIPSAAPTTPPP 240
           +TKPP K P A  P S  SPP+PP +PTPPSSAPTPEPPIPPFPFDQPLIPSAAP  PPP
Sbjct: 182 STKPPAKPPQATPPDSKPSPPSPPTEPTPPSSAPTPEPPIPPFPFDQPLIPSAAP-KPPP 241

Query: 241 PPSSAYKCSFMVHFSVGFSFVAIILLAL 268
            PS AY+CSF +H S GF+FVAI++LAL
Sbjct: 242 RPSLAYRCSFRIHLSFGFTFVAIMILAL 255

[Close]

BLAST of CmoCh02G001520.1 vs. NCBI nr
Match: gi|700208159|gb|KGN63278.1| (hypothetical protein Csa_2G423580 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-84
Identity = 192/268 (71.64%), Postives = 213/268 (79.48%), Query Frame = 1


Query: 1   MAASRTL-MALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVY 60
           M ASRTL MALAIAAT+ VELAMA NYTVGDS GWEIG + Q+WA+SKNFT+GDV+ F Y
Sbjct: 1   MGASRTLIMALAIAATMAVELAMATNYTVGDSGGWEIGPNFQAWASSKNFTIGDVLIFEY 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
           S+NHDVVEV E DF SCS SNPIEKH GG+TAITL T+GKRFFICGVPGHC AGMKV+ID
Sbjct: 61  SSNHDVVEVNEPDFSSCSASNPIEKHIGGSTAITLLTSGKRFFICGVPGHCLAGMKVEID 120

Query: 121 TLAASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPASPPKS 180
           TLA  SPPPSS   PPSPPP  TPSSPPP S PP              P+SPPP+SPPK+
Sbjct: 121 TLANPSPPPSSIVMPPSPPPEETPSSPPPTSSPPD-------------PTSPPPSSPPKA 180

Query: 181 ATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPPFPFDQPLIPSAAPTTPPP 240
           +TKPP K P A  P S  SPP+PP +PTPPSSAPTPEPPIPPFPFDQPLIPSAAP  PPP
Sbjct: 181 STKPPAKPPQATPPDSKPSPPSPPTEPTPPSSAPTPEPPIPPFPFDQPLIPSAAP-KPPP 240

Query: 241 PPSSAYKCSFMVHFSVGFSFVAIILLAL 268
            PS AY+CSF +H S GF+FVAI++LAL
Sbjct: 241 RPSLAYRCSFRIHLSFGFTFVAIMILAL 254

[Close]

BLAST of CmoCh02G001520.1 vs. NCBI nr
Match: gi|659111635|ref|XP_008455830.1| (PREDICTED: blue copper protein-like [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 1.2e-82
Identity = 191/268 (71.27%), Postives = 212/268 (79.10%), Query Frame = 1


Query: 1   MAASRT-LMALAIAATLVVELAMAANYTVGDSDGWEIGTDVQSWAASKNFTVGDVISFVY 60
           M ASRT +MALAIAAT+ VELAMA NYTVGDS GWEIG + QSWA+SK+FT+GDV+ F Y
Sbjct: 2   MGASRTVIMALAIAATMAVELAMATNYTVGDSGGWEIGPNFQSWASSKSFTIGDVLIFEY 61

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
           S+NHDV+EV E DF SCS SNPIEKHTGG+TAITL T+GKRFFICGVPGHC AGMKV+ID
Sbjct: 62  SSNHDVLEVNEPDFSSCSASNPIEKHTGGSTAITLLTSGKRFFICGVPGHCLAGMKVEID 121

Query: 121 TLAASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPASPPKS 180
           TL   SPPPSS   PPSPPP  TPSSPPP S P              AP+SPPP+S PK+
Sbjct: 122 TLENPSPPPSSIATPPSPPPEVTPSSPPPTSTPS-------------APTSPPPSSAPKA 181

Query: 181 ATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPPFPFDQPLIPSAAPTTPPP 240
           ATKPP KSP A  P S  SPPAPP +PTPPSSAPTP+P IP FPFDQPLIPSAAP  PPP
Sbjct: 182 ATKPPAKSPQASPPDSKPSPPAPPTEPTPPSSAPTPDPQIPLFPFDQPLIPSAAP-KPPP 241

Query: 241 PPSSAYKCSFMVHFSVGFSFVAIILLAL 268
           PPS AY+CS  +H SVGF+FVAI+LLAL
Sbjct: 242 PPSLAYRCSSRIHLSVGFTFVAIMLLAL 255

[Close]

BLAST of CmoCh02G001520.1 vs. NCBI nr
Match: gi|255549321|ref|XP_002515714.1| (PREDICTED: uclacyanin-3 [Ricinus communis])

HSP 1 Score: 160.6 bits (405), Expect = 3.8e-36
Identity = 128/272 (47.06%), Postives = 170/272 (62.50%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVELAMAANYTVGDSDG-WEIGTDVQSWAASKNFTVGDVISFVY 60
           MA  R +M+LA+ A L  ELAMAANYTVG S+G W+  T++Q+WAAS+ F+VGD + F Y
Sbjct: 1   MAILRNVMSLAVIAMLF-ELAMAANYTVGGSNGGWDTSTNLQAWAASQLFSVGDNLIFQY 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
            ANH++ EV + D+ SC  SN I+ H+ G+T I LS+ G R+FICG PGHCT GMKV+ID
Sbjct: 61  GANHNLFEVSQADYDSCQTSNAIQGHSDGSTVIPLSSPGTRYFICGTPGHCTQGMKVEID 120

Query: 121 TLAASSPPPSSTDAPPSPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPASPPKS 180
            L +S+PPP++          ATP++PPP SP      A P  PP  +P SPPP SP  S
Sbjct: 121 VLPSSTPPPATP---------ATPATPPPTSPINPPPPATPATPPPASPISPPPPSP--S 180

Query: 181 ATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPP-----FPFDQPLI-PSAA 240
           +  PP+ S   PSP    S P+P    +PP ++PT  PP PP      P   P I PS  
Sbjct: 181 SVMPPSSS---PSP--TTSTPSP--SQSPPETSPTMSPPSPPTSPMGSPKSSPTISPSPD 240

Query: 241 PTTPPPPPSSAYKCSFMVHFSVGFSFVAIILL 266
            ++PPP PSSA K S   + +V FS V ++++
Sbjct: 241 VSSPPPSPSSANKASIRSNLTVSFSIVMMMMI 253

[Close]

BLAST of CmoCh02G001520.1 vs. NCBI nr
Match: gi|568830919|ref|XP_006469730.1| (PREDICTED: uclacyanin-2-like [Citrus sinensis])

HSP 1 Score: 154.1 bits (388), Expect = 3.5e-34
Identity = 120/272 (44.12%), Postives = 159/272 (58.46%), Query Frame = 1


Query: 1   MAASRTLMALAIAATLVVELAMAANYTVGDSDG-WEIGTDVQSWAASKNFTVGDVISFVY 60
           MA  RT + +A A  ++++L+MAANYTVG  +G W+  TD+++WA S+ F VGD + F Y
Sbjct: 1   MAVLRTFICVA-ATAMLIQLSMAANYTVGGPNGGWDTATDLRTWATSQKFLVGDNLIFQY 60

Query: 61  SANHDVVEVKEVDFGSCSGSNPIEKHTGGNTAITLSTAGKRFFICGVPGHCTAGMKVQID 120
            ++HDV EV + D+ SC  SN I+ +T GNT I LS+ GKR+FICG PGHCT GMKV+ID
Sbjct: 61  PSSHDVTEVSKPDYDSCQTSNKIQSYTDGNTVIPLSSPGKRYFICGAPGHCTVGMKVEID 120

Query: 121 TLAASSPPPSSTDAPP-----SPPPHATPSSPPPASPPPSSKDAPPTPPPIVAPSSPPPA 180
            LA++SP P+S   PP     +P P A+  +PPPASP P +             SSP P 
Sbjct: 121 ALASTSPAPASPSKPPQASLAAPTPQASSKTPPPASPAPET-------------SSPSPE 180

Query: 181 SPPKSATKPPTKSPLAPSPGSNASPPAPPFKPTPPSSAPTPEPPIPPFPFDQPLIPSAAP 240
             PKSA   PT SP +PS     SPP  P  PT  S + +P P               + 
Sbjct: 181 ESPKSA---PTVSPASPSSSPLGSPPPSPDVPTADSPSTSPPP---------------SG 240

Query: 241 TTPPPPPSSAYKCSFMVHFSVGFSFVAIILLA 267
            + PP PSSA K  F    ++GFSF  ++LLA
Sbjct: 241 LSQPPQPSSAAKVVFKTIMAMGFSFGIMMLLA 240

The following BLAST results are available for this feature:

BLAST of CmoCh02G001520.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BCB3_ARATH	1.8e-17	39.90	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]
BCP_PEA	8.7e-17	42.37	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]
BCB2_ARATH	3.3e-16	38.12	Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1	[more]
MAVI_CUCPE	3.7e-15	40.57	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]

BLAST of CmoCh02G001520.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN86_CUCSA	8.9e-85	71.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G423580 PE=4 SV=1	[more]
B9RPP5_RICCO	2.6e-36	47.06	Early nodulin 20, putative OS=Ricinus communis GN=RCOM_1548050 PE=4 SV=1	[more]
V4TJV5_9ROSI	1.8e-32	45.02	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018339mg PE=4 SV=1	[more]
A0A067EXP9_CITSI	4.3e-31	51.08	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g043413mg PE=4 S...	[more]
A0A061EAB7_THECC	2.1e-30	49.75	Uclacyanin 1, putative OS=Theobroma cacao GN=TCM_007776 PE=4 SV=1	[more]

BLAST of CmoCh02G001520.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60270.1	1.8e-20	39.49	Cupredoxin superfamily protein	[more]
AT3G27200.1	5.8e-19	37.40	Cupredoxin superfamily protein	[more]
AT3G60280.1	9.9e-19	39.90	uclacyanin 3	[more]
AT1G22480.1	2.2e-18	40.15	Cupredoxin superfamily protein	[more]
AT2G32300.1	1.4e-17	34.56	uclacyanin 1	[more]

BLAST of CmoCh02G001520.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468329\|ref\|XP_004151874.1\|	1.3e-84	71.64	PREDICTED: blue copper protein-like [Cucumis sativus]	[more]
gi\|700208159\|gb\|KGN63278.1\|	1.3e-84	71.64	hypothetical protein Csa_2G423580 [Cucumis sativus]	[more]
gi\|659111635\|ref\|XP_008455830.1\|	1.2e-82	71.27	PREDICTED: blue copper protein-like [Cucumis melo]	[more]
gi\|255549321\|ref\|XP_002515714.1\|	3.8e-36	47.06	PREDICTED: uclacyanin-3 [Ricinus communis]	[more]
gi\|568830919\|ref\|XP_006469730.1\|	3.5e-34	44.12	PREDICTED: uclacyanin-2-like [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G001520	CmoCh02G001520	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G001520.1	CmoCh02G001520.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G001520.1.three_prime_UTR.1	CmoCh02G001520.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G001520.1.CDS.2	CmoCh02G001520.1.CDS.2	CDS
CmoCh02G001520.1.CDS.1	CmoCh02G001520.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G001520.1.five_prime_UTR.1	CmoCh02G001520.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G001520.1.exon.2	CmoCh02G001520.1.exon.2	exon
CmoCh02G001520.1.exon.1	CmoCh02G001520.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 57..119 score: 1.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 34..114 score: 9.3
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 24..122 score: 38
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 23..127 score: 4.5
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 22..120 score: 2.4
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 7..202 score: 7.8