CmoCh01G014090.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGAAAAAAGAAAACCCATCAATTTAAATTCTAATATCTGCTTCAACTTTTCCCCTTCGTCTGTATTTGACCAGTGATGAAATGAAGATGAAAAACACGGGATTTGACTCAAGGAAAGTCACAGCATTCATAAGTGAAGAGAGAAAATGATGAATTGTTCCACCACTAACCTCGAAGAGCCTTTCCCTTTCAAATACCATGACTTGATTTAAACTCAGTCCCACTTCTTCGATCTTCTGGCCGCCATGGAAAAGCCACCATCCAGCTTCTTCGTGATAGGGTTTTCCATTGTTGCAACCCTCACCCTCGCCTCCTTCGCGTCATGTATGGCTGCTGAATTCAACAGAACAAGTGTAAGTTTCTTCTTTCACTTTCTTTCTCATTTACAGTATTGATTTTTCATACAAAAATTTCCTGAATCATCGAAATCGAAATATGTGGTAGAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGGTTTGATCTGTTTAATAATGGCTCAAATCATTGGAAACACTATAATCTGCCATAGCTATTGGCCAAAGGAGAATAGAAAGAGTTGCAGTGTCAAAAGGCCTCTCCTTTCAACCACCCTTCTCATCTCTTGGTCAGTAATTATTTCTTCATATAAATCTTCATTTTTTTCTGTATTTTTTTCAGTTTATCTGGGGATTAAGAAAATGAAACTAACAATAGTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTTTTTTTTTTTTTGCAAGATCAAGTAAACTACAAAATAGCATTATTATTAATACTAAAATGATAATAATATATGAGAATTATTTGAAGGATGAAGTAATTTACTTTGTTCCGGGCATATATTGTTAAGAAAAAACATATAGTACTTATTGTATCATTTAGTCTCCAATATTTTGGTGCTAAATCAATTTCAACATTCATCATCAACAAGAAGACCAAAAAATAATTCAAACATAAGAGAACACTCCTAAATTAAAGTATTTAATAGCTTTTTAAAATTTTAACTTTTAGTATACATAACTAATTAAAATTTTTAAAATTGTGTTCAATAACTAATTAAAATAAAATAAAATAACAAAAAAAAAACTATTCATAGACCAACTAAACACAAAATTAAAAATTTAGATTTACATCGTTTGTAAAAACTAATATGGTATACAATAGATCAATTAACTTTTAAAAATTTTGAGCATCTCCCATAATTACTAGACATAAAATTGAAAGTTTAGAATCTACTAGAAATTTTAAAATTAATAAACCTGGTAAACACAAAATTGAAAGTTCAAATATTTATATTATACATTTTCTAAAGTTAAAAAAATTAAAGGACTAAACTATAATTTAACCTCTATTTACCAGGAAAATGAAATAAAGAAAAAATATCATTTTGATCCTTAAATTTTTTTATATAGCTTCAATTTAGTCCCTAAATTTTAAAATATTATTTTATTTGGAGTTGAGTTGTAATTGTATCCTTAAGTTGTGAGATCCTACCTTTTTACCTTTTCTGAGATCCTACCTTTTTACCTTTTCAGTTAATAACTTATCGTTTACTTTTGGACTTTGGTATTTTGTATTGATTTAATTAATTAAATATTATGATGTATAATTTTTTTTAATTAATTGAAATAGTGATAATAATTAAACTAATTAATAAAAAATTAACATAAATTATCAAAAGTGATCAGTAATAAAAATTGAAGATAAGTATGTAAAATTTTGAAAGATAGGAACGAAATGAAAACCAAGCTCAAGAAAAAAACATATAAGATCAGATGAAATCTATAAATAAAAATAATAATAATAATAATAATAATAATAATAAAAAACTGAATGGCAAGAAATAATAAAAAAAGGCTAAAATAGTAAATAAAATGAAATACCAGGGCCAGCTTTGGAATTGCGGTGGTAATGATGAGTGGAGCCATCAGCATGAGCAGCAGACAAGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATGTGGTGAAAGACCGAATATTTGTTGGCGCGGCCCTATTGGTTCTCATTAATGGGGCCTCCACCATATCCTCCGCCGCCATTGGAAGGAAGAGCCACCCTAAAGGGCCCACTCAAATAAATTCACAAATTAGATAACCACGAGAAGTTAATATACATCACCCAAATATTTTTCCTTCTTTTTTTTCCTGTATTTATTCGATCATCAATAAAGAAAATCCCCCAAATTGTTCATAATCTCCATCTCAAAATTGAAATGGTAATCGATATCATTTCTAATATTTGTAGTGTTTTTTACTCCTAAAATTATGATCGAGCATATCTATTGCGTGTAAAGACATATATTTAGTCCCCTG TAAGAAAAAAGAAAACCCATCAATTTAAATTCTAATATCTGCTTCAACTTTTCCCCTTCGTCTGTATTTGACCAGTGATGAAATGAAGATGAAAAACACGGGATTTGACTCAAGGAAAGTCACAGCATTCATAAGTGAAGAGAGAAAATGATGAATTGTTCCACCACTAACCTCGAAGAGCCTTTCCCTTTCAAATACCATGACTTGATTTAAACTCAGTCCCACTTCTTCGATCTTCTGGCCGCCATGGAAAAGCCACCATCCAGCTTCTTCGTGATAGGGTTTTCCATTGTTGCAACCCTCACCCTCGCCTCCTTCGCGTCATGTATGGCTGCTGAATTCAACAGAACAAGTAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGGTTTGATCTGTTTAATAATGGCTCAAATCATTGGAAACACTATAATCTGCCATAGCTATTGGCCAAAGGAGAATAGAAAGAGTTGCAGTGTCAAAAGGCCTCTCCTTTCAACCACCCTTCTCATCTCTTGGGCCAGCTTTGGAATTGCGGTGGTAATGATGAGTGGAGCCATCAGCATGAGCAGCAGACAAGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATGTGGTGAAAGACCGAATATTTGTTGGCGCGGCCCTATTGGTTCTCATTAATGGGGCCTCCACCATATCCTCCGCCGCCATTGGAAGGAAGAGCCACCCTAAAGGGCCCACTCAAATAAATTCACAAATTAGATAACCACGAGAAGTTAATATACATCACCCAAATATTTTTCCTTCTTTTTTTTCCTGTATTTATTCGATCATCAATAAAGAAAATCCCCCAAATTGTTCATAATCTCCATCTCAAAATTGAAATGGTAATCGATATCATTTCTAATATTTGTAGTGTTTTTTACTCCTAAAATTATGATCGAGCATATCTATTGCGTGTAAAGACATATATTTAGTCCCCTG ATGGAAAAGCCACCATCCAGCTTCTTCGTGATAGGGTTTTCCATTGTTGCAACCCTCACCCTCGCCTCCTTCGCGTCATGTATGGCTGCTGAATTCAACAGAACAAGTAAAAAGGACCTGAAATTGAACGGCAGATTCTGCTTTCTGCCTGAAAGTGAAGCATTCAAATTGGGAGTCGCAGGTTTGATCTGTTTAATAATGGCTCAAATCATTGGAAACACTATAATCTGCCATAGCTATTGGCCAAAGGAGAATAGAAAGAGTTGCAGTGTCAAAAGGCCTCTCCTTTCAACCACCCTTCTCATCTCTTGGGCCAGCTTTGGAATTGCGGTGGTAATGATGAGTGGAGCCATCAGCATGAGCAGCAGACAAGAGTATGGGAAGGGGTGGGTGGAAGGAGAATGCTATGTGGTGAAAGACCGAATATTTGTTGGCGCGGCCCTATTGGTTCTCATTAATGGGGCCTCCACCATATCCTCCGCCGCCATTGGAAGGAAGAGCCACCCTAAAGGGCCCACTCAAATAAATTCACAAATTAGATAA
BLAST of CmoCh01G014090.1 vs. TrEMBL
Match: A0A0A0L099_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G247410 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 9.3e-70 Identity = 139/184 (75.54%), Postives = 155/184 (84.24%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. TrEMBL
Match: A0A068UFA9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024403001 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.1e-37 Identity = 83/180 (46.11%), Postives = 119/180 (66.11%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. TrEMBL
Match: D7TFD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00640 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.6e-37 Identity = 81/167 (48.50%), Postives = 118/167 (70.66%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. TrEMBL
Match: A0A067L150_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06716 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 7.9e-37 Identity = 79/179 (44.13%), Postives = 126/179 (70.39%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. TrEMBL
Match: A0A067FY76_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030101mg PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.3e-36 Identity = 79/183 (43.17%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. TAIR10
Match: AT4G19370.1 (AT4G19370.1 Protein of unknown function (DUF1218)) HSP 1 Score: 119.4 bits (298), Expect = 2.3e-27 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. TAIR10
Match: AT1G31720.1 (AT1G31720.1 Protein of unknown function (DUF1218)) HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25 Identity = 67/186 (36.02%), Postives = 101/186 (54.30%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. NCBI nr
Match: gi|659087031|ref|XP_008444240.1| (PREDICTED: uncharacterized protein LOC103487629 [Cucumis melo]) HSP 1 Score: 280.0 bits (715), Expect = 2.9e-72 Identity = 142/182 (78.02%), Postives = 157/182 (86.26%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. NCBI nr
Match: gi|778692678|ref|XP_004150759.2| (PREDICTED: uncharacterized protein LOC101207283 [Cucumis sativus]) HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69 Identity = 139/184 (75.54%), Postives = 155/184 (84.24%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. NCBI nr
Match: gi|661889251|emb|CDP07220.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 163.7 bits (413), Expect = 3.0e-37 Identity = 83/180 (46.11%), Postives = 119/180 (66.11%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. NCBI nr
Match: gi|225427623|ref|XP_002269579.1| (PREDICTED: uncharacterized protein LOC100266552 isoform X1 [Vitis vinifera]) HSP 1 Score: 162.9 bits (411), Expect = 5.1e-37 Identity = 81/167 (48.50%), Postives = 118/167 (70.66%), Query Frame = 1
BLAST of CmoCh01G014090.1 vs. NCBI nr
Match: gi|802599901|ref|XP_012072656.1| (PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]) HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36 Identity = 79/179 (44.13%), Postives = 126/179 (70.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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