CmoCh01G011450.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTTCTTTTCCCATCTTTGACGTGCTTTATAAATTCATCTCATCTTCTTCGTCTAATCTTGAATCCCATGTTTTCTATTTGAAGAACAACAAAAATGCCAGAGAAAGACAGTCAATGTGTTGCTAAACAGCCTCGTCTTGTGGCTAGAAAGTTTCTGGCTAGGCCTCAACATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGGTAATCAGAGAAAACTCTTCAGATCTTTCTCTGTTTCTTGTTTTCTTTGATCCCCTGAATGTACCATTTCAATTATTTTGCATTTTGATTCATGGGTTTCTATCGGTTTCTCGTTTTTTCTCCTCATAATGTAGCATTTGAGTTAGTAAGTGAAGTGGACCATTGGTTTATGGTTTGGTTTAATGCTTTAATGGTGTTTTTTTCACAGATTTGAGCTGAAATACTTCGACCCTTTTCTGGTTTTGGATGAATTTTCAGGTGGGTCTCTTTCTTGTTTATGATTCTGAAATTGAATGAGTTTGATAGCAATTGCATAAATGATTCTTATGAGTTTGATAGCAATTGTATAAATGATTCTTATGAGTTTGATAGCAATTGCATAAATCATTCTTATGAGTTTGATAGCAATTGCATAAATGATTCTTATGAGTTTGATAGCAATTGTATAAATGATCCTTATGAGTTTGATAGCAATTGCCTAAATAATTCTTATGAGTTCGATAGCAATTGCATAAATGATTCTTATGAGTTTGATAGCAATTGTATAAATGATTCTTATGAGTTTGATAGCAATTGCATAAATAATTCTTATGAGTTCGATAGCAATTGCATAAATGATTCTTATGAGTTTTGGTTCTTGAACTTTGTAGTTACTGCCCCAGCTGGGTTCCCTGATCATCCACATAGAGGTTTGGAATTTGAATGATTGATTTCTGGTGTTCATATAAGTTTAATACACTGTCCTAACTTCGTGTTTAATTCTTTGAGATGAAAACAGGATTTGAGACAGTGACCTACATGTTACAGGTATGCCCAAGGCCTATTGATCTTACCACTAAGCATAGTAGTTCGGATTTCATCGATCAAATTGTTGCATGAAAATGCTATGCTAAAAGAAGAAGAAACTAAATGCTTGTTTGAGAGTTTTTTTTGGTGTTATAGCTCAAGCTCACGGCTAGTAGATATTATCTACTTTGACCTGTTACGTATTGCTGTTAGCCTCATGGTTTTAAAACGTGTATGCTAGGGAGAGGTTTCTACACTATTATAAATAATGCTTCGTTCTTATCTCACAGTCCACGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTTTCTCTAGTAGATGTGTTTTAAAATCGTGAAGCTGATGGCGATACGTAATGGGTTAAAGCGGACAATATTTGCTAGTGGTGGGCTTGGATCCACAGTTGGAGAGGGGAACGATACATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGTAGACTCTTTTAAAACCATTAGGCTGATGGTGATACGTAACGGGCCAAAGCGGACAATATCTCCTAGTGGTGGATTTGGATCCACGGTTGGAGAGAGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACTCGTTTTAAAACCATTAGGCTGATGGTGATACATAACAGGCCAAAGCAGACAATATCTCCTAATGGTAGGCTTGGATCCACGGTTGGAGAGAGGAATGAAACATTTTTTTATAAGGGTGTGAAAACCTCTCCTTAACACACGCGTTTTAAAACAGTGAGGCTAATAGCGTTACGTAATGGGTCAAAACAGGCAATATCGACTAGTCATGGGCTTGGGTTGTTACATCTGGTTTCTAAGTAGCTTTAGAAAATTACGATAAGGTAGGTTGTAAAAAGTAACGTTATTTTTGTTAACTATCTCGAGTTGGTGTAGTGGTCAATAAGGAAAATGTAAATAGTAGAAGGCTTAGAGGGGTTTGGTGACCACCTACCACAGATAATGTTCTGGTTCACATGGACTTAAAGTATACTTTTTTTTAACACAAATTCAAAGAAAACTTCTACTTTTTTAAAAAAAGGTATACCGTTCAAAGAAATAGTCGTTCGAATATATAATAACGTCGTGAAGAACACGTATGATTTGACGGTATACAATATGTTAATACATGACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGCCTCCAACTATGGATCAACCTTTCTTCCAAGAACAAAATGTAAGAACCACCTTTTCTTATGCCTTTGTTCTTCATTTTTGTTACTCGGGTATCGAAGTCCTCACTTCGTGTATACTCATGGCCCATACTCGCTTATTTCTCGTGATACTTCATCTACATTCACTTATACTCATGGCCCACACTCGCTTATGTCTTGTGATACTGTTGAGGATTGTTGGGATGGAGTCCCATATTGGTTAATTTAGGGATCGATCATGGGTTTATAAGTAAGGAATACATCTTTATTGGTATGAGGCATTTTGGAGATCTGCCCTTAACTTGTCGAGAGTCTTGAATGTGTAGTAAAAAATGACTTTAAGTGTCGAACAAACGGTGTACTTTGTTCGAGGACTCCAGAGAAGGAGTCGAGTCTCGATTAAGGGGAGGCTGTTCAAGGGCTCCATAGACCTCAAGGGAGGCTCTATGGTGTATTTTGTTTGAGGGGAGGATTGTTGGGAGAGGAGTCCCACAGGCTAATTAAGGGGTTGATTATGGGTTATAAGTAAGTAATATATCTCCATTGATATGAAGCCTTTTGGGAAACCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGAAGAGTCGTTATTCGTAACAGATACTTCATCCATACTCGCTTATACTCATGGCCGACACTCGCTTATTTCTCGTGATACCATTCACACTAAACCAGCTCCAAGAGACAACAAAAGTCTTTAAGGTTCAAGTTTTTCACAGTTGGAAACTTGAGTTTAGGAACTTGAAGGGTATCTCTCCTGGTTAATGCTTTTTTCACAAACAACCATCATGATTTTTCATGATTGATCCTTTTTTATAAAGTGCTTTCGAGTGAAGAACACTTTATTTGTGGCAGATCAGCTTGAACAACCTTCCTTTTGCTTGTGAATGAATCTTCGTAAAATATTTGTGAATGTAATAGCCCAAGCCGACCGCTAGCAGATATTGTCTTCTTTGAGTTTTTTCTTTCGGGTTTCCCGTCAAGATTTTTAAAACGCGTCTACTTGGAAGAGGTTTCCATACCCTTATAAAGAATGCTTCGTTCTCCTCCTCAACTGATGTGGAATCTCACAGTCCACCACCCTCTTTCGGGGCCCAGTGAGAATGCTGACATTCGTTCCCTTCTCCAATTGATGTGGGACCCCCAATCCACCCCCTTCGAGACTCAGTGTCCTTGTTGGCACACCGTCTCGTGTCCACCGCCCTTCAGGGCTCAAATTTCTCCCTGACACATCACCTGATGTTTGGCTCTGATACCATTTGTAAAGCCCATGGTAGATATTGTCCTCTTTGGGTTTCCCCTTTCGGATTTCCCGTCAAAGTTTTTAAAACACATCTTCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGATTTGTTCTTCTCCTCAACCGAAGTGGGATCTCACAATCTACCCCCTTTTGGGCCCAGCGTCCTTGTTGGCACACCGCCTTGCGTCCACCCTCTTTCGGGGCTCAACCTCCTTGTTGGCATATCACCCGGTGTTTAGCTCTGATACCATTTGTAATGGTCCAAGCCCACCGCTAGTAAATATTGTCCTCTTTAGGCTTTCCCTTTAGGCTTCCTCTCAACGTTTTTAAAACACGTCTACTAGAGAGAGGTTTCCACACCCTTGTAAAGAATGTTTCATTTTCCTCCCCAACCGACGTGGTATCTCACAGTGAATGTCGAAACTAGCCGGTATACTCTTAATTTAGAAAGATGTATTCATTCAAAGATGACATTGAGTAAAACCCGTGTAAATTTCATACAGAGTAATTACGATGTTCGTAACAAATGTCTCAAACTTTTTTGAATCTTAGGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACAAAAGATGGAGTGACAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCCACACAAGAACACCAACAATGTACTTAGACTTCACTCTCAACCCAAAGGCTCATCTCCATCAGCCAATCCCGTCGTCCTGGAACGCGTTCGTTTACATTCTCGAGGGCGAGGGCGTCTTCGGCAGTTCGAAGGCGACGTCGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGACGTGTGGAATAAGTCATCCAAGGCTGTAAGGTTCATCTTGGTAGGAGGTGAACGACTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAACAAATTGACCAAACCATTGATGATTTTGATAACTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCACAAGCTGCAATTTCATAGGATATATTCTTTTTTTTTAAATCATTATTCAAATATGTAAAAAATACATTCCATCGACACGGTTCTCAAGATAGGGTTTTTAAATTTGAACGTCTGTATAAGTGCAATCGCAATTCTTATGAATTTCATTAGTTAATATCTTTC TTTCTTCTTTTCCCATCTTTGACGTGCTTTATAAATTCATCTCATCTTCTTCGTCTAATCTTGAATCCCATGTTTTCTATTTGAAGAACAACAAAAATGCCAGAGAAAGACAGTCAATGTGTTGCTAAACAGCCTCGTCTTGTGGCTAGAAAGTTTCTGGCTAGGCCTCAACATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGATTTGAGCTGAAATACTTCGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCTGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGCCTCCAACTATGGATCAACCTTTCTTCCAAGAACAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACAAAAGATGGAGTGACAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCCACACAAGAACACCAACAATGTACTTAGACTTCACTCTCAACCCAAAGGCTCATCTCCATCAGCCAATCCCGTCGTCCTGGAACGCGTTCGTTTACATTCTCGAGGGCGAGGGCGTCTTCGGCAGTTCGAAGGCGACGTCGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGACGTGTGGAATAAGTCATCCAAGGCTGTAAGGTTCATCTTGGTAGGAGGTGAACGACTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAACAAATTGACCAAACCATTGATGATTTTGATAACTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCACAAGCTGCAATTTCATAGGATATATTCTTTTTTTTTAAATCATTATTCAAATATGTAAAAAATACATTCCATCGACACGGTTCTCAAGATAGGGTTTTTAAATTTGAACGTCTGTATAAGTGCAATCGCAATTCTTATGAATTTCATTAGTTAATATCTTTC ATGCCAGAGAAAGACAGTCAATGTGTTGCTAAACAGCCTCGTCTTGTGGCTAGAAAGTTTCTGGCTAGGCCTCAACATGAAGGGTTGGGCGCCATTGTTAGAAGGAGCATTGGAAGATTTGAGCTGAAATACTTCGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCTGATCATCCACATAGAGGATTTGAGACAGTGACCTACATGTTACAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGTGACTTGCAGTGGATGACTGCAGGTAGAGGTATTGTACATTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGCCTCCAACTATGGATCAACCTTTCTTCCAAGAACAAAATGATTGAGCCAAATTACCAAGAAGTTTCAAGCAAGGAAATCCCAGAAGCTACAAAAGATGGAGTGACAGTGAAAGTCATAGCTGGTGAGGCATTGGGAGCAAAATCACCAATCCACACAAGAACACCAACAATGTACTTAGACTTCACTCTCAACCCAAAGGCTCATCTCCATCAGCCAATCCCGTCGTCCTGGAACGCGTTCGTTTACATTCTCGAGGGCGAGGGCGTCTTCGGCAGTTCGAAGGCGACGTCGACGACAGCACATAACCTTCTTCTGCTCGGGTTCGGGGACGGTTTAGACGTGTGGAATAAGTCATCCAAGGCTGTAAGGTTCATCTTGGTAGGAGGTGAACGACTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAACAAATTGACCAAACCATTGATGATTTTGATAACTATACCAATGGGTTTGAGAAAGCAAGGCATTGGAGATCACAAGCTGCAATTTCATAG
BLAST of CmoCh01G011450.1 vs. Swiss-Prot
Match: PIRL_SOLLC (Pirin-like protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 1.8e-116 Identity = 195/286 (68.18%), Postives = 238/286 (83.22%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. Swiss-Prot
Match: PRNL1_ARATH (Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590 PE=2 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 2.5e-113 Identity = 199/296 (67.23%), Postives = 233/296 (78.72%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. Swiss-Prot
Match: PRNL2_ARATH (Pirin-like protein 2 OS=Arabidopsis thaliana GN=PRN2 PE=1 SV=3) HSP 1 Score: 383.3 bits (983), Expect = 2.5e-105 Identity = 187/299 (62.54%), Postives = 231/299 (77.26%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. Swiss-Prot
Match: PRN1_ARATH (Pirin-1 OS=Arabidopsis thaliana GN=PRN1 PE=1 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.6e-94 Identity = 163/279 (58.42%), Postives = 213/279 (76.34%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. Swiss-Prot
Match: PIR_HUMAN (Pirin OS=Homo sapiens GN=PIR PE=1 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 2.3e-90 Identity = 161/281 (57.30%), Postives = 199/281 (70.82%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TrEMBL
Match: A0A0A0LAT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G760550 PE=3 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 1.7e-156 Identity = 270/298 (90.60%), Postives = 282/298 (94.63%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TrEMBL
Match: A0A061F5P2_THECC (RmlC-like cupins superfamily protein OS=Theobroma cacao GN=TCM_030751 PE=3 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 1.0e-145 Identity = 243/299 (81.27%), Postives = 274/299 (91.64%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TrEMBL
Match: A0A067L424_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00977 PE=3 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 2.5e-144 Identity = 246/299 (82.27%), Postives = 272/299 (90.97%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TrEMBL
Match: A0A0B0N5T2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11620 PE=3 SV=1) HSP 1 Score: 517.3 bits (1331), Expect = 1.2e-143 Identity = 242/299 (80.94%), Postives = 271/299 (90.64%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TrEMBL
Match: A0A151SXI4_CAJCA (Pirin-like protein At1g50590 family OS=Cajanus cajan GN=KK1_014948 PE=3 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 3.6e-143 Identity = 243/298 (81.54%), Postives = 268/298 (89.93%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TAIR10
Match: AT1G50590.1 (AT1G50590.1 RmlC-like cupins superfamily protein) HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-114 Identity = 199/296 (67.23%), Postives = 233/296 (78.72%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TAIR10
Match: AT2G43120.1 (AT2G43120.1 RmlC-like cupins superfamily protein) HSP 1 Score: 383.3 bits (983), Expect = 1.4e-106 Identity = 187/299 (62.54%), Postives = 231/299 (77.26%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TAIR10
Match: AT3G59220.1 (AT3G59220.1 pirin) HSP 1 Score: 346.7 bits (888), Expect = 1.5e-95 Identity = 163/279 (58.42%), Postives = 213/279 (76.34%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. TAIR10
Match: AT3G59260.1 (AT3G59260.1 pirin, putative) HSP 1 Score: 327.4 bits (838), Expect = 9.1e-90 Identity = 156/263 (59.32%), Postives = 196/263 (74.52%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. NCBI nr
Match: gi|449465069|ref|XP_004150251.1| (PREDICTED: pirin-like protein [Cucumis sativus]) HSP 1 Score: 560.1 bits (1442), Expect = 2.4e-156 Identity = 270/298 (90.60%), Postives = 282/298 (94.63%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. NCBI nr
Match: gi|659093735|ref|XP_008447691.1| (PREDICTED: pirin-like protein [Cucumis melo]) HSP 1 Score: 558.9 bits (1439), Expect = 5.3e-156 Identity = 270/298 (90.60%), Postives = 280/298 (93.96%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. NCBI nr
Match: gi|1009111227|ref|XP_015899916.1| (PREDICTED: pirin-like protein [Ziziphus jujuba]) HSP 1 Score: 527.3 bits (1357), Expect = 1.7e-146 Identity = 245/298 (82.21%), Postives = 272/298 (91.28%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. NCBI nr
Match: gi|590606063|ref|XP_007020648.1| (RmlC-like cupins superfamily protein [Theobroma cacao]) HSP 1 Score: 524.2 bits (1349), Expect = 1.4e-145 Identity = 243/299 (81.27%), Postives = 274/299 (91.64%), Query Frame = 1
BLAST of CmoCh01G011450.1 vs. NCBI nr
Match: gi|1009171407|ref|XP_015866722.1| (PREDICTED: pirin-like protein [Ziziphus jujuba]) HSP 1 Score: 524.2 bits (1349), Expect = 1.4e-145 Identity = 244/298 (81.88%), Postives = 271/298 (90.94%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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