CmoCh01G010730.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G010730.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Required to maintain repression 2
Location	Cmo_Chr01 : 8944883 .. 8947780 (+)
Sequence length	1689

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTAAACATAAAACAAAAGAAACTCAGCCCGGTCTGACATGACCCACATAAACCCTTGCAAAGAAAACGGAGAGGAACTGCTAATAGCAAACTGGAGGAGCAGAAGACGATTCGTCGTGAAGACGAAGGCAATTAGGGCATATCTCTGAATGCAAAGCCTTCCCAGAAGACCGCCGGAGGAGGAATCGAGGCTAAGATTGCGAGTCCAAAAGCATCACACGCTACGGGACTTCTTCATCTTCTTTTCAAGTTTTCTAGTTGGTCGAAGAATTGATGTCTCGTAGGGACGAGGAAACAGAGTTGTAAATTTTCTCACCTGGATTTTCTGTTGTTAAAGAGTTCTTCTGTGGATTTTTGACACAATGGTTAACGGGAGTACTGTTGATCATTCGCTGGATGTACGGTTGGATAGGCGACTGAAGAGAAGGTTAGTTTCGAATCGACAGTATAAGAACTACTGTTGCAAAACTTCGAAGAAGCATGAACTAGAAGAATTCGATGCGGAATATCGGAAATTCTTAGATAATTTACCGATGTTTGTGGATAGCAGTGAGGAGATTGTTGAGGCTAAACCTCAGGATTTTGGGCGTGATAATGACGATAATGGGACTTCGCGCTGTAAATGGTTGGTAGATGAAGTTGATCCTGTTTATGAGATGTTTTTTCAGCATTTGATTGAAGAGGGGAAAGCATATAAGCTTGAAATTCCATCAGTTGATGGAATGAAAGTGTATGTGAAGTATGAGGAAGACGAAAAATCAAGCCCGAAGAAAGATCAAAATAGTAAAAAACCTGGAACTATCAGGACCTTGACGAGTGCTTCAAGGAAAGATGAGATAGCGAGCACAGATAAAGAAAGCCCGGTTCCTTTGTTTGAGGAAGAGTTCAGTCTGGATTGTGCAAAACCTGTATCTAATGGGGTCAATGGAAATTCAAGCACAATGCTCGGTACAGGTCTTCTCAGTTCTGCTAAGCGTCTTTCCCTATCCGATTCTGACTCGGATAATATGGACGAAGACTATAAGACATTTTTGACAGATTTTCTTTGTGATGATCGTAGATATCAATTAATGCCTCCAGATGGTAGGCGATTTGTCTATGAGCACGATGGAAGTATCTCTAAGTCAGAAGTGGTGAAGATGAACACCGATTCATGTAAGCGCAGCAGTGCTAGATTTGGGAGAAAATATTTACGTTCCGCTGTGAGTATATCTAATTCTAATGCTGTGATATCTCTTTATTTTAATGGGAAAGGATATAGAACTTGGTTATGTCTTAGATTGATAGATTTTTTTTGTTCTTTCCAGATGGATATAGATAGTGGGAAGAGTCTTCAGAGTCCTGGTATATATAAAAGTTCCAATTTCAGGGAGAGGCTCATAAAAGTTCTTCAAAAACCATATGATCAACGTGAGTACGACTTTTTTCTTCAAGAAGTAGGCCGCCGTAGGCCACATGTTCGTCATAGAGAATTACGTAGTAGAGTGCTAAAACCATATACACTGGAATCTCGCGCCAAATCATATCTTCATCTCTATGATGGTGAGTGCTTTTAGTCCCAATGTAATTTTCTACTGCGATTATATTGATTGGATTTTGCTTGTTATCAGTGTTCTTCAATGTGTTGAAAGGCTGTATGAGCTACGAATTTCTCTTATATAATAGTAATCTTTGGAAACAACTAGTATTTTCAACACCCCCAGTCTTTTTCCTCTAAAAAGATTCCTCCATGAATACCACTTCCTGAAGATGTTCATCCTAAGAGAGGATGTTCTAACCCCCAATCTGATACTTTTACCAAACATTCATAATTTGCACCAAAATTGATTTTTCAGGTTATTAAGGTAATACTACTTGTCACTCTTCTAATTGTCAAGACTACCTAAGAAGTGTTAAAGAAACTATCTTCTAGCTTGATTTGATATTTTGTGTTTATCCCAAAGAGAAGTGTTAAATGAACCTCTGGACATGTAAATATTCTTTGTCAAGTAGATTCAAATTATGCACTTGCCTTTTTCTGTTTCATTAATTTCTTTGCTTAGACTTTCGAATTTATTTGCATGATGTTCATTATAATCAGTGCGGATTCTATGTATTGAATCTACCTTCTCTGTTTTTTTTTTTTTGGCAGATCTTGCTATGAAAATTCAATCAGTTCAATATGATTGCCCCAGAACTTTGAACCTACTACGTGGCTTCTTCTATTGGTTGCAGGTAGTTTTTTATATTTTTGTGAAACATGCTTATTTCATAGACGTCTTCTTCAGCAATTATGATAGTAGTTAATGGGCACTTAATTATGTAGTTTAAGAAATAGAATATATTCTACTGGTACAATAAAGGACTAGATTAAGGAGGTAAAGAGTCTCTGTCTTGGGCCACGAAAAGAGTTATTATATCTTTTAGTGCACTTCACCACTTTTAAGAATATGTTCTCTTCGAGAAATGATGAGAGGAGGTTACCACGATGTGGAAGTGGTTGGCAATTTTACACTATTAAGAGAGAAACTACTAAACTATTTTAAATTTGTATCCTATGATTATTAAGAGATAACTACGTGTAGCAGCTTTATTTAATAATTTTTTTTGTTCCCTTCCTATATTGACTTCGACATTGTGTGGTTCCTTTTGGTTTTTTTTTTGTCAGAATTTGTCCCATGAGGATGCTTTTCAGCCTTGGATGGACCCATCATGCCTGAATGTGTTGCCACTCTCATAACTTGGAAATGTAGCTCAGTTTAAGCTCTTGTTTAAGTCACTGTATTTGGTGATGGATAAATCAGATAAAACAGTGTCCTGAATGTATTTTGGTGGTCTTTGGTTTCATGCTCTGTAAGTACGGTATAAAGTTGGTGCTAACCATTCATTTGTTGCATGATCCACATGAAGTATAG

mRNA sequence

TTTTTTTAAACATAAAACAAAAGAAACTCAGCCCGGTCTGACATGACCCACATAAACCCTTGCAAAGAAAACGGAGAGGAACTGCTAATAGCAAACTGGAGGAGCAGAAGACGATTCGTCGTGAAGACGAAGGCAATTAGGGCATATCTCTGAATGCAAAGCCTTCCCAGAAGACCGCCGGAGGAGGAATCGAGGCTAAGATTGCGAGTCCAAAAGCATCACACGCTACGGGACTTCTTCATCTTCTTTTCAAGTTTTCTAGTTGGTCGAAGAATTGATGTCTCGTAGGGACGAGGAAACAGAGTTGTAAATTTTCTCACCTGGATTTTCTGTTGTTAAAGAGTTCTTCTGTGGATTTTTGACACAATGGTTAACGGGAGTACTGTTGATCATTCGCTGGATGTACGGTTGGATAGGCGACTGAAGAGAAGGTTAGTTTCGAATCGACAGTATAAGAACTACTGTTGCAAAACTTCGAAGAAGCATGAACTAGAAGAATTCGATGCGGAATATCGGAAATTCTTAGATAATTTACCGATGTTTGTGGATAGCAGTGAGGAGATTGTTGAGGCTAAACCTCAGGATTTTGGGCGTGATAATGACGATAATGGGACTTCGCGCTGTAAATGGTTGGTAGATGAAGTTGATCCTGTTTATGAGATGTTTTTTCAGCATTTGATTGAAGAGGGGAAAGCATATAAGCTTGAAATTCCATCAGTTGATGGAATGAAAGTGTATGTGAAGTATGAGGAAGACGAAAAATCAAGCCCGAAGAAAGATCAAAATAGTAAAAAACCTGGAACTATCAGGACCTTGACGAGTGCTTCAAGGAAAGATGAGATAGCGAGCACAGATAAAGAAAGCCCGGTTCCTTTGTTTGAGGAAGAGTTCAGTCTGGATTGTGCAAAACCTGTATCTAATGGGGTCAATGGAAATTCAAGCACAATGCTCGGTACAGGTCTTCTCAGTTCTGCTAAGCGTCTTTCCCTATCCGATTCTGACTCGGATAATATGGACGAAGACTATAAGACATTTTTGACAGATTTTCTTTGTGATGATCGTAGATATCAATTAATGCCTCCAGATGGTAGGCGATTTGTCTATGAGCACGATGGAAGTATCTCTAAGTCAGAAGTGGTGAAGATGAACACCGATTCATGTAAGCGCAGCAGTGCTAGATTTGGGAGAAAATATTTACGTTCCGCTATGGATATAGATAGTGGGAAGAGTCTTCAGAGTCCTGGTATATATAAAAGTTCCAATTTCAGGGAGAGGCTCATAAAAGTTCTTCAAAAACCATATGATCAACGTGAGTACGACTTTTTTCTTCAAGAAGTAGGCCGCCGTAGGCCACATGTTCGTCATAGAGAATTACGTAGTAGAGTGCTAAAACCATATACACTGGAATCTCGCGCCAAATCATATCTTCATCTCTATGATGATCTTGCTATGAAAATTCAATCAGTTCAATATGATTGCCCCAGAACTTTGAACCTACTACGTGGCTTCTTCTATTGGTTGCAGAATTTGTCCCATGAGGATGCTTTTCAGCCTTGGATGGACCCATCATGCCTGAATATAAAACAGTGTCCTGAATGTATTTTGGTGGTCTTTGGTTTCATGCTCTGTAAGTACGGTATAAAGTTGGTGCTAACCATTCATTTGTTGCATGATCCACATGAAGTATAG

Coding sequence (CDS)

ATGGTTAACGGGAGTACTGTTGATCATTCGCTGGATGTACGGTTGGATAGGCGACTGAAGAGAAGGTTAGTTTCGAATCGACAGTATAAGAACTACTGTTGCAAAACTTCGAAGAAGCATGAACTAGAAGAATTCGATGCGGAATATCGGAAATTCTTAGATAATTTACCGATGTTTGTGGATAGCAGTGAGGAGATTGTTGAGGCTAAACCTCAGGATTTTGGGCGTGATAATGACGATAATGGGACTTCGCGCTGTAAATGGTTGGTAGATGAAGTTGATCCTGTTTATGAGATGTTTTTTCAGCATTTGATTGAAGAGGGGAAAGCATATAAGCTTGAAATTCCATCAGTTGATGGAATGAAAGTGTATGTGAAGTATGAGGAAGACGAAAAATCAAGCCCGAAGAAAGATCAAAATAGTAAAAAACCTGGAACTATCAGGACCTTGACGAGTGCTTCAAGGAAAGATGAGATAGCGAGCACAGATAAAGAAAGCCCGGTTCCTTTGTTTGAGGAAGAGTTCAGTCTGGATTGTGCAAAACCTGTATCTAATGGGGTCAATGGAAATTCAAGCACAATGCTCGGTACAGGTCTTCTCAGTTCTGCTAAGCGTCTTTCCCTATCCGATTCTGACTCGGATAATATGGACGAAGACTATAAGACATTTTTGACAGATTTTCTTTGTGATGATCGTAGATATCAATTAATGCCTCCAGATGGTAGGCGATTTGTCTATGAGCACGATGGAAGTATCTCTAAGTCAGAAGTGGTGAAGATGAACACCGATTCATGTAAGCGCAGCAGTGCTAGATTTGGGAGAAAATATTTACGTTCCGCTATGGATATAGATAGTGGGAAGAGTCTTCAGAGTCCTGGTATATATAAAAGTTCCAATTTCAGGGAGAGGCTCATAAAAGTTCTTCAAAAACCATATGATCAACGTGAGTACGACTTTTTTCTTCAAGAAGTAGGCCGCCGTAGGCCACATGTTCGTCATAGAGAATTACGTAGTAGAGTGCTAAAACCATATACACTGGAATCTCGCGCCAAATCATATCTTCATCTCTATGATGATCTTGCTATGAAAATTCAATCAGTTCAATATGATTGCCCCAGAACTTTGAACCTACTACGTGGCTTCTTCTATTGGTTGCAGAATTTGTCCCATGAGGATGCTTTTCAGCCTTGGATGGACCCATCATGCCTGAATATAAAACAGTGTCCTGAATGTATTTTGGTGGTCTTTGGTTTCATGCTCTGTAAGTACGGTATAAAGTTGGTGCTAACCATTCATTTGTTGCATGATCCACATGAAGTATAG

Homology

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BLAST of CmoCh01G010730.1 vs. TrEMBL
Match: A0A0A0K3W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G221350 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.8e-104
Identity = 227/408 (55.64%), Postives = 277/408 (67.89%), Query Frame = 1


Query: 1   MVNGSTVDHSLDVRLDRRLKRRLVSNRQYKNYCCKTSKKHE-LEEFDAEYRKFLDNLPMF 60
           MV+GST  H  D RLDR L          +++C    +    +EE D +Y  FL++L   
Sbjct: 1   MVDGSTGMHFPDHRLDRSL---------CQSFCHGIVEGVSGVEECDKDYLNFLNDLTYG 60

Query: 61  VDSSEEIVEAKPQDFGRDNDDNGTSRCKWLVDEVDPVYEMFFQHLIEEGKAYKLEIPSVD 120
           VDS++E V+A  +D      DN TS   W   +VDPVY MFF HLI +GKAYKLEIPSV+
Sbjct: 61  VDSNDENVDAYLED-----GDNSTSHFNWSDKKVDPVYRMFFHHLIGDGKAYKLEIPSVN 120

Query: 121 GMKVY-VKYEEDEKSSPKKDQNSKKPGTIRTLTSASRKDEIASTDKESPVPLFEEEFSLD 180
           GMKVY VKYEE E+   +   N K+PGT R L S S++ +I S  K+SPV  FE+EF++D
Sbjct: 121 GMKVYAVKYEEQEQE--QSSLNRKRPGTTRILRSDSKRMKIESQPKKSPVFSFEKEFNVD 180

Query: 181 CAKPVSNGVNGNSSTMLGTGLLSSAKRLSLSDSDSDNMDEDYKTFLTD-FLCDDRRYQLM 240
           CAK     ++GNSST+ G  L  SAK L  S+SDS+ +DEDYKTFL D F  DD      
Sbjct: 181 CAK----SIDGNSSTIPGA-LPRSAKHLFQSNSDSNLIDEDYKTFLNDSFYDDDHTLTYT 240

Query: 241 PPDGRRFVYEHDGSISKSEVVKMNTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIYKS 300
           P DGR  VYE   SIS SEV+   TD CK++   FGRKY    +D+DSGK L S G    
Sbjct: 241 PVDGRSIVYEDGESISDSEVLMFETDPCKQNRRSFGRKYSCFTVDVDSGKCL-SLGRRTG 300

Query: 301 SNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLHLY 360
           SNFRERL+KVL+ PYD+R+YD++L EV RRRP VRHRELRSRVLK Y L+S  KSYLH++
Sbjct: 301 SNFRERLMKVLKSPYDERQYDYYLDEVSRRRPQVRHRELRSRVLKAYQLDSYGKSYLHIH 360

Query: 361 DDLAMKIQSVQYDCPRTLNLLRGFFYWLQNLSHEDAFQPWMDPSCLNI 406
            +LA KIQ+VQYD  RTL LLRGFFYWLQNLSHEDAFQPWMDPSCL++
Sbjct: 361 SELATKIQAVQYDRLRTLTLLRGFFYWLQNLSHEDAFQPWMDPSCLSV 386

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BLAST of CmoCh01G010730.1 vs. TrEMBL
Match: F6H0H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01650 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 7.8e-46
Identity = 136/410 (33.17%), Postives = 219/410 (53.41%), Query Frame = 1


Query: 8   DHSLDVRLDRRLKRRLVSNRQYKNYCCKTSKKHELEE-------FDAEYRKFLDNLPMFV 67
           D++ D+RL+RRLKRR V+N+  K   C    K   ++        D +YR  +   P  V
Sbjct: 38  DNARDMRLERRLKRRCVANQSLKINSCTRGTKRTPQDAPTKVILLDDDYR--IKKTPQAV 97

Query: 68  DSSEEIVEAKPQDFGRDNDDNGTSRCKWLV--DEVDPVYEMFFQHLIEEGKAYKLEIPSV 127
              + +++    D+    D  G +RC   V  D++DP Y+MF++++ E+  ++ LE+   
Sbjct: 98  AIKDILLD---DDYKVYLDTLGNNRCNPSVGDDDLDPQYKMFWENVREDATSFVLEVAVD 157

Query: 128 DGMKVYVKYEEDEKSSPKKDQNSKKPGTIRTLTSASRKDEIASTDKESPVPLFEEEFSLD 187
           + + + +KYEED++       +  KPG+   L + ++++ + + +    VP  + +  +D
Sbjct: 158 EDIHILLKYEEDDRLG-----DEGKPGSPDNLRTVTKRENMENPEISKDVPARKRKTLID 217

Query: 188 CAKPVSNGVNGNSSTMLGTGLLSSAKRLSLSDSD--SDNMDEDYKTFLTDFLCDDRRYQL 247
                 N +  + S    + +LSS++     +++     +DE YKTFL     D +    
Sbjct: 218 ------NKLRPDLSKKASSRVLSSSEPKCKHETEPCDTGIDESYKTFLECIKEDGKYLVF 277

Query: 248 MPPDGRRFVYEHDG-SISKSEVVKMNTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIY 307
           +   G+R  YE D  S S+SE++  ++D C                D    K+    G  
Sbjct: 278 VNKHGKRVKYEEDEESESESEILAADSDPC----------ITPKLFDSSRIKNRNRTG-- 337

Query: 308 KSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLH 367
             S FR+ L+ +L+KPYDQ EY+  LQE+ +R+P  RHR+LR R+ K Y++E  +KSYL 
Sbjct: 338 -HSQFRDNLMVILKKPYDQLEYEELLQEIIQRKPLERHRDLRGRI-KSYSVEICSKSYLD 397

Query: 368 LYDDLAMKIQSVQYDCPRTLNLLRGFFYWLQNLSHEDAFQPWMDPSCLNI 406
            + DL  KI +VQ D  + LNLLRGFFYWL+NLSHE AFQPW D SCL +
Sbjct: 398 HHTDLKRKIDAVQGDHCKILNLLRGFFYWLKNLSHEGAFQPWSDASCLKM 417

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BLAST of CmoCh01G010730.1 vs. TrEMBL
Match: A0A067GYP6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017705mg PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.2e-27
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = 1


Query: 201 SSAKRLSLSDSDSDNMDEDYKTFLTDFLCDDRRYQLMPPDGRRFVYEHDGSISKSEVVKM 260
           +SAKR        D +DE Y+ FL  FL + +  +  P DG++  YE   S S+  ++  
Sbjct: 161 NSAKRQCNRGVQFDLVDESYQEFLK-FLENGQHLEYTPEDGKKVSYEESDSESQVMILDT 220

Query: 261 NTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFF 320
           N  S    +           +D+D  + +++    K S FR  L+++LQKPYD++EY+  
Sbjct: 221 NPFSDGEPTPL--------VIDLDGEECIENLSGSKGSIFRNELMEILQKPYDRQEYEKL 280

Query: 321 LQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLHLYDDLAMKIQSVQYDCPRTLNLLRG 380
            Q+  ++RP    R LR +  K Y L+S  KSYL L+ DLA  I   Q D  R LNLLRG
Sbjct: 281 WQDASQQRPLQGVRILRFQN-KSYPLDSNGKSYLQLHGDLASAINEAQCDNCRILNLLRG 340

Query: 381 FFYWLQNLSHEDAFQPWMDPSCLN 405
           FFYWLQN++ E +F+PW+D SCL+
Sbjct: 341 FFYWLQNVAREGSFKPWLDSSCLS 354

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BLAST of CmoCh01G010730.1 vs. TrEMBL
Match: V4V677_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000428mg PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 6.2e-27
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = 1


Query: 201 SSAKRLSLSDSDSDNMDEDYKTFLTDFLCDDRRYQLMPPDGRRFVYEHDGSISKSEVVKM 260
           +SAKR        D +DE Y+ FL  FL + +  +  P DG++  YE   S S+  ++  
Sbjct: 515 NSAKRQCNRGVQFDLVDESYQEFLK-FLENGQYLEYTPEDGKKVTYEESDSESQVMILDT 574

Query: 261 NTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFF 320
           N  S    +           +D+D  + +++    K S FR  L+++LQKPYD++EY+  
Sbjct: 575 NPFSDGEPTPL--------VIDLDGEECIENLSGSKGSIFRNELMEILQKPYDRQEYEKL 634

Query: 321 LQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLHLYDDLAMKIQSVQYDCPRTLNLLRG 380
            Q+  ++RP    R LR +  K Y L+S  KSYL L+ DLA  I   Q D  R LNLLRG
Sbjct: 635 WQDASQQRPLQGVRILRFQN-KSYPLDSNGKSYLQLHGDLASAINEAQCDNCRILNLLRG 694

Query: 381 FFYWLQNLSHEDAFQPWMDPSCLN 405
           FFYWLQN++ E +F+PW+D SCL+
Sbjct: 695 FFYWLQNVAREGSFKPWLDSSCLS 708

[Close]

BLAST of CmoCh01G010730.1 vs. TrEMBL
Match: A0A067GYA6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017705mg PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 79/204 (38.73%), Postives = 115/204 (56.37%), Query Frame = 1


Query: 201 SSAKRLSLSDSDSDNMDEDYKTFLTDFLCDDRRYQLMPPDGRRFVYEHDGSISKSEVVKM 260
           +SAKR        D +DE Y+ FL  FL + +  +  P DG++  YE   S S+  ++  
Sbjct: 161 NSAKRQCNRGVQFDLVDESYQEFLK-FLENGQHLEYTPEDGKKVSYEESDSESQVMILDT 220

Query: 261 NTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFF 320
           N  S    +           +D+D  + +++    K S FR  L+++LQKPYD++EY+  
Sbjct: 221 NPFSDGEPTPL--------VIDLDGEECIENLSGSKGSIFRNELMEILQKPYDRQEYEKL 280

Query: 321 LQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLHLYDDLAMKIQSVQYDCPRTLNLLRG 380
            Q+  ++RP    R LR +  K Y L+S  KSYL L+D LA  I   Q D  R LNLLRG
Sbjct: 281 WQDASQQRPLQGVRILRFQN-KSYPLDSNGKSYLQLHD-LASAINEAQCDNCRILNLLRG 340

Query: 381 FFYWLQNLSHEDAFQPWMDPSCLN 405
           FFYWLQN++ E +F+PW+D SCL+
Sbjct: 341 FFYWLQNVAREGSFKPWLDSSCLS 353

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BLAST of CmoCh01G010730.1 vs. TAIR10
Match: AT1G77270.1 (AT1G77270.1 unknown protein)

HSP 1 Score: 82.0 bits (201), Expect = 9.9e-16
Identity = 44/117 (37.61%), Postives = 69/117 (58.97%), Query Frame = 1


Query: 283 IDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELRS-RVL 342
           ID    ++   I+ SS F ++L+++L+ PYD++E+     E   +RP  + R+LR  R +
Sbjct: 557 IDLEDGIKPDDIFNSS-FSKKLMEILRNPYDEKEFLRLYNEASVKRPLTKSRQLRDGREI 616

Query: 343 KPYTLESRAKSYLHLYDDLAMKIQSVQYDCPRTLNLLRGFFYWLQNLSHEDAFQPWM 399
           + Y  +  A SYL  Y D        + D PR LNLLRGFF++L+N+  E AF+PW+
Sbjct: 617 EYYCDDQFALSYLEKYTDFNKTYHRYRKDLPRALNLLRGFFFYLENIVLEGAFKPWL 672

[Close]

BLAST of CmoCh01G010730.1 vs. TAIR10
Match: AT1G21560.2 (AT1G21560.2 unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 4.6e-13
Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 1


Query: 216 MDEDYKTFLTDFLCDDRRYQLMPPDGRRFVYEHDGSISKSE-----VVKMNTDSCKRSSA 275
           +DE Y+++L   + + +  +  P    +   E D ++S S+     +V  +    +   +
Sbjct: 205 LDEVYRSYLKRLVENSKSSRTNPEKEIKVKCEEDHTVSLSDSDSDIIVVGDCPFLEEEDS 264

Query: 276 RFGRKYLRSAMDIDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPH 335
            F        +D+D   S Q     ++S FR  ++ VL++PY   E     +E       
Sbjct: 265 PFVPSKSYKVIDLDEESSDQ-----RNSWFRREIMNVLKQPYTVTELKELHKEASVHGVS 324

Query: 336 VRHRELRSRVLKPYTLESRAKSYLHLYDDLAMK-IQSV-QYDCPRTLNLLRGFFYWLQNL 395
            RH ELR      +    +  SYL  Y D   + + S+ + D  + LNLLRGF +++ N+
Sbjct: 325 SRHIELRDGTEFSFPTNKKKPSYLDRYPDFKKQYLDSLREKDERKALNLLRGFIFYITNV 384

Query: 396 SHEDAFQPWMDPSCLNIK 407
             +DAF+PW+D  CL I+
Sbjct: 385 VRDDAFKPWLDQECLKIR 397

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BLAST of CmoCh01G010730.1 vs. TAIR10
Match: AT4G01170.1 (AT4G01170.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 3.3e-11
Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 1


Query: 278 RSAMDIDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELR 337
           +  +D+D G       I   + FR+ L+ VL++PYD+ E     ++V   R   R RELR
Sbjct: 318 KKVVDLDEGSKKNESSI---TWFRKELMDVLKQPYDEEEMKQLHRDVSIHRKMTRCRELR 377

Query: 338 SRVLKPYTLESRAKSYLHLYDDLAMKIQSVQY--DCPRTLNLLRGFFYWLQNLSHEDAFQ 397
                 Y      +SYL  + D   + + V    D  R L LLRGFF++L+ +SH+  F+
Sbjct: 378 KGRGSVYETGELGQSYLESFPDFEKEYKLVVGVDDKARALKLLRGFFFYLKYVSHDGVFK 436

[Close]

BLAST of CmoCh01G010730.1 vs. TAIR10
Match: AT3G07730.1 (AT3G07730.1 unknown protein)

HSP 1 Score: 66.6 bits (161), Expect = 4.3e-11
Identity = 41/121 (33.88%), Postives = 61/121 (50.41%), Query Frame = 1


Query: 278 RSAMDIDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELR 337
           +  +D+D G          SS FR+ L+ VL+ PYD+ E     + V   +   R RELR
Sbjct: 348 KKVVDLDEGSKENESS---SSWFRKELMDVLKNPYDEGEMKQLHRYVSIHKKMTRCRELR 407

Query: 338 SRVLKPYTLESRAKSYLHLYDDLAMKIQSVQ-YDCPRTLNLLRGFFYWLQNLSHEDAFQP 397
                 Y  +   +SYL  + D   + + V   D  R L LLRGFF++L+ +SH+  F+P
Sbjct: 408 KGRGSDYETDELGQSYLESFPDFEKEYKLVVGVDKARALKLLRGFFFYLKYVSHDGVFKP 465

[Close]

BLAST of CmoCh01G010730.1 vs. NCBI nr
Match: gi|659092745|ref|XP_008447196.1| (PREDICTED: uncharacterized protein LOC103489706 isoform X1 [Cucumis melo])

HSP 1 Score: 406.4 bits (1043), Expect = 6.5e-110
Identity = 235/410 (57.32%), Postives = 282/410 (68.78%), Query Frame = 1


Query: 1   MVNGSTVDHSLDVRLDRRLKRRLVSNRQYKNYCCKTSKKHE-LEEFDAEYRKFLDNLPMF 60
           MV+GST +H    R DR L + L         C +T ++   +EE D +Y  FL++L   
Sbjct: 1   MVDGSTGNHLPHDRWDRTLCQIL---------CHRTVEEESGMEECDKDYLNFLNDLTYS 60

Query: 61  VDSSEEIVEAKPQDFGRDNDDNGTSRCKWLVDEVDPVYEMFFQHLIEEGKAYKLEIPSVD 120
           VDS++E V+A  +D       N TS   W   +VDPVY MFF HLI +GKAYKLEIPSV+
Sbjct: 61  VDSNDENVDACLED-----GYNSTSHFNWSDKKVDPVYRMFFHHLIGDGKAYKLEIPSVN 120

Query: 121 GMKVYV-KYEEDEKSSPKKDQ--NSKKPGTIRTLTSASRKDEIASTDKESPVPLFEEEFS 180
           GM+VYV KYEE E+   K+    N K+PGT R L S S+K +I S  KESPV  FE+EF 
Sbjct: 121 GMEVYVLKYEEQEQEQEKEQSSLNRKRPGTTRILRSDSKKMKIESPPKESPVSSFEKEFK 180

Query: 181 LDCAKPVSNGVNGNSSTMLGTGLLSSAKRLSLSDSDSDNMDEDYKTFLTD-FLCDDRRYQ 240
           +DCAK     V+GNSST+ GT    SAK LS S+SDS+ +DEDYKTFLTD F  DD    
Sbjct: 181 VDCAK----SVDGNSSTIPGT-RPHSAKHLSQSNSDSNLIDEDYKTFLTDSFYDDDHTLT 240

Query: 241 LMPPDGRRFVYEHDGSISKSEVVKMNTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIY 300
             P DGR  VYE   SIS SEV+   TD CK++   FGRKY  S +D+DSGK LQS G  
Sbjct: 241 YTPVDGRSIVYEDGESISDSEVLMFETDPCKQNRRSFGRKYSCSTVDVDSGKCLQSLGRR 300

Query: 301 KSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLH 360
             SNFRERL+KVL+ PYD+R+Y+F+L EV RRRP VRHRELRSRVLK Y L+S  KSYLH
Sbjct: 301 TGSNFRERLMKVLKSPYDERQYEFYLDEVSRRRPQVRHRELRSRVLKAYALDSYGKSYLH 360

Query: 361 LYDDLAMKIQSVQYDCPRTLNLLRGFFYWLQNLSHEDAFQPWMDPSCLNI 406
           ++ +LA KIQ+VQYD  RTLNLLRGFFYWLQNLSHEDAFQPWMDPSCLN+
Sbjct: 361 IHSELATKIQAVQYDRLRTLNLLRGFFYWLQNLSHEDAFQPWMDPSCLNV 391

[Close]

BLAST of CmoCh01G010730.1 vs. NCBI nr
Match: gi|659092749|ref|XP_008447198.1| (PREDICTED: uncharacterized protein LOC103489706 isoform X3 [Cucumis melo])

HSP 1 Score: 399.4 bits (1025), Expect = 7.9e-108
Identity = 222/368 (60.33%), Postives = 263/368 (71.47%), Query Frame = 1


Query: 42  LEEFDAEYRKFLDNLPMFVDSSEEIVEAKPQDFGRDNDDNGTSRCKWLVDEVDPVYEMFF 101
           +EE D +Y  FL++L   VDS++E V+A  +D       N TS   W   +VDPVY MFF
Sbjct: 1   MEECDKDYLNFLNDLTYSVDSNDENVDACLED-----GYNSTSHFNWSDKKVDPVYRMFF 60

Query: 102 QHLIEEGKAYKLEIPSVDGMKVYV-KYEEDEKSSPKKDQ--NSKKPGTIRTLTSASRKDE 161
            HLI +GKAYKLEIPSV+GM+VYV KYEE E+   K+    N K+PGT R L S S+K +
Sbjct: 61  HHLIGDGKAYKLEIPSVNGMEVYVLKYEEQEQEQEKEQSSLNRKRPGTTRILRSDSKKMK 120

Query: 162 IASTDKESPVPLFEEEFSLDCAKPVSNGVNGNSSTMLGTGLLSSAKRLSLSDSDSDNMDE 221
           I S  KESPV  FE+EF +DCAK     V+GNSST+ GT    SAK LS S+SDS+ +DE
Sbjct: 121 IESPPKESPVSSFEKEFKVDCAK----SVDGNSSTIPGT-RPHSAKHLSQSNSDSNLIDE 180

Query: 222 DYKTFLTD-FLCDDRRYQLMPPDGRRFVYEHDGSISKSEVVKMNTDSCKRSSARFGRKYL 281
           DYKTFLTD F  DD      P DGR  VYE   SIS SEV+   TD CK++   FGRKY 
Sbjct: 181 DYKTFLTDSFYDDDHTLTYTPVDGRSIVYEDGESISDSEVLMFETDPCKQNRRSFGRKYS 240

Query: 282 RSAMDIDSGKSLQSPGIYKSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELR 341
            S +D+DSGK LQS G    SNFRERL+KVL+ PYD+R+Y+F+L EV RRRP VRHRELR
Sbjct: 241 CSTVDVDSGKCLQSLGRRTGSNFRERLMKVLKSPYDERQYEFYLDEVSRRRPQVRHRELR 300

Query: 342 SRVLKPYTLESRAKSYLHLYDDLAMKIQSVQYDCPRTLNLLRGFFYWLQNLSHEDAFQPW 401
           SRVLK Y L+S  KSYLH++ +LA KIQ+VQYD  RTLNLLRGFFYWLQNLSHEDAFQPW
Sbjct: 301 SRVLKAYALDSYGKSYLHIHSELATKIQAVQYDRLRTLNLLRGFFYWLQNLSHEDAFQPW 358

Query: 402 MDPSCLNI 406
           MDPSCLN+
Sbjct: 361 MDPSCLNV 358

[Close]

BLAST of CmoCh01G010730.1 vs. NCBI nr
Match: gi|778725774|ref|XP_004139802.2| (PREDICTED: uncharacterized protein LOC101206512 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 4.1e-104
Identity = 227/408 (55.64%), Postives = 277/408 (67.89%), Query Frame = 1


Query: 1   MVNGSTVDHSLDVRLDRRLKRRLVSNRQYKNYCCKTSKKHE-LEEFDAEYRKFLDNLPMF 60
           MV+GST  H  D RLDR L          +++C    +    +EE D +Y  FL++L   
Sbjct: 1   MVDGSTGMHFPDHRLDRSL---------CQSFCHGIVEGVSGVEECDKDYLNFLNDLTYG 60

Query: 61  VDSSEEIVEAKPQDFGRDNDDNGTSRCKWLVDEVDPVYEMFFQHLIEEGKAYKLEIPSVD 120
           VDS++E V+A  +D      DN TS   W   +VDPVY MFF HLI +GKAYKLEIPSV+
Sbjct: 61  VDSNDENVDAYLED-----GDNSTSHFNWSDKKVDPVYRMFFHHLIGDGKAYKLEIPSVN 120

Query: 121 GMKVY-VKYEEDEKSSPKKDQNSKKPGTIRTLTSASRKDEIASTDKESPVPLFEEEFSLD 180
           GMKVY VKYEE E+   +   N K+PGT R L S S++ +I S  K+SPV  FE+EF++D
Sbjct: 121 GMKVYAVKYEEQEQE--QSSLNRKRPGTTRILRSDSKRMKIESQPKKSPVFSFEKEFNVD 180

Query: 181 CAKPVSNGVNGNSSTMLGTGLLSSAKRLSLSDSDSDNMDEDYKTFLTD-FLCDDRRYQLM 240
           CAK     ++GNSST+ G  L  SAK L  S+SDS+ +DEDYKTFL D F  DD      
Sbjct: 181 CAK----SIDGNSSTIPGA-LPRSAKHLFQSNSDSNLIDEDYKTFLNDSFYDDDHTLTYT 240

Query: 241 PPDGRRFVYEHDGSISKSEVVKMNTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIYKS 300
           P DGR  VYE   SIS SEV+   TD CK++   FGRKY    +D+DSGK L S G    
Sbjct: 241 PVDGRSIVYEDGESISDSEVLMFETDPCKQNRRSFGRKYSCFTVDVDSGKCL-SLGRRTG 300

Query: 301 SNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLHLY 360
           SNFRERL+KVL+ PYD+R+YD++L EV RRRP VRHRELRSRVLK Y L+S  KSYLH++
Sbjct: 301 SNFRERLMKVLKSPYDERQYDYYLDEVSRRRPQVRHRELRSRVLKAYQLDSYGKSYLHIH 360

Query: 361 DDLAMKIQSVQYDCPRTLNLLRGFFYWLQNLSHEDAFQPWMDPSCLNI 406
            +LA KIQ+VQYD  RTL LLRGFFYWLQNLSHEDAFQPWMDPSCL++
Sbjct: 361 SELATKIQAVQYDRLRTLTLLRGFFYWLQNLSHEDAFQPWMDPSCLSV 386

[Close]

BLAST of CmoCh01G010730.1 vs. NCBI nr
Match: gi|659092747|ref|XP_008447197.1| (PREDICTED: uncharacterized protein LOC103489706 isoform X2 [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 217/391 (55.50%), Postives = 263/391 (67.26%), Query Frame = 1


Query: 1   MVNGSTVDHSLDVRLDRRLKRRLVSNRQYKNYCCKTSKKHE-LEEFDAEYRKFLDNLPMF 60
           MV+GST +H    R DR L + L         C +T ++   +EE D +Y  FL++L   
Sbjct: 1   MVDGSTGNHLPHDRWDRTLCQIL---------CHRTVEEESGMEECDKDYLNFLNDLTYS 60

Query: 61  VDSSEEIVEAKPQDFGRDNDDNGTSRCKWLVDEVDPVYEMFFQHLIEEGKAYKLEIPSVD 120
           VDS++E V+A  +D       N TS   W   +VDPVY MFF HLI +GKAYKLEIPSV+
Sbjct: 61  VDSNDENVDACLED-----GYNSTSHFNWSDKKVDPVYRMFFHHLIGDGKAYKLEIPSVN 120

Query: 121 GMKVYV-KYEEDEKSSPKKDQ--NSKKPGTIRTLTSASRKDEIASTDKESPVPLFEEEFS 180
           GM+VYV KYEE E+   K+    N K+PGT R L S S+K +I S  KESPV  FE+EF 
Sbjct: 121 GMEVYVLKYEEQEQEQEKEQSSLNRKRPGTTRILRSDSKKMKIESPPKESPVSSFEKEFK 180

Query: 181 LDCAKPVSNGVNGNSSTMLGTGLLSSAKRLSLSDSDSDNMDEDYKTFLTD-FLCDDRRYQ 240
           +DCAK     V+GNSST+ GT    SAK LS S+SDS+ +DEDYKTFLTD F  DD    
Sbjct: 181 VDCAK----SVDGNSSTIPGT-RPHSAKHLSQSNSDSNLIDEDYKTFLTDSFYDDDHTLT 240

Query: 241 LMPPDGRRFVYEHDGSISKSEVVKMNTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIY 300
             P DGR  VYE   SIS SEV+   TD CK++   FGRKY  S +D+DSGK LQS G  
Sbjct: 241 YTPVDGRSIVYEDGESISDSEVLMFETDPCKQNRRSFGRKYSCSTVDVDSGKCLQSLGRR 300

Query: 301 KSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLH 360
             SNFRERL+KVL+ PYD+R+Y+F+L EV RRRP VRHRELRSRVLK Y L+S  KSYLH
Sbjct: 301 TGSNFRERLMKVLKSPYDERQYEFYLDEVSRRRPQVRHRELRSRVLKAYALDSYGKSYLH 360

Query: 361 LYDDLAMKIQSVQYDCPRTLNLLRGFFYWLQ 387
           ++ +LA KIQ+VQYD  RTLNLLRGFFYWLQ
Sbjct: 361 IHSELATKIQAVQYDRLRTLNLLRGFFYWLQ 372

[Close]

BLAST of CmoCh01G010730.1 vs. NCBI nr
Match: gi|731427921|ref|XP_010664153.1| (PREDICTED: uncharacterized protein LOC100257388 [Vitis vinifera])

HSP 1 Score: 193.0 bits (489), Expect = 1.1e-45
Identity = 136/410 (33.17%), Postives = 219/410 (53.41%), Query Frame = 1


Query: 8   DHSLDVRLDRRLKRRLVSNRQYKNYCCKTSKKHELEE-------FDAEYRKFLDNLPMFV 67
           D++ D+RL+RRLKRR V+N+  K   C    K   ++        D +YR  +   P  V
Sbjct: 38  DNARDMRLERRLKRRCVANQSLKINSCTRGTKRTPQDAPTKVILLDDDYR--IKKTPQAV 97

Query: 68  DSSEEIVEAKPQDFGRDNDDNGTSRCKWLV--DEVDPVYEMFFQHLIEEGKAYKLEIPSV 127
              + +++    D+    D  G +RC   V  D++DP Y+MF++++ E+  ++ LE+   
Sbjct: 98  AIKDILLD---DDYKVYLDTLGNNRCNPSVGDDDLDPQYKMFWENVREDATSFVLEVAVD 157

Query: 128 DGMKVYVKYEEDEKSSPKKDQNSKKPGTIRTLTSASRKDEIASTDKESPVPLFEEEFSLD 187
           + + + +KYEED++       +  KPG+   L + ++++ + + +    VP  + +  +D
Sbjct: 158 EDIHILLKYEEDDRLG-----DEGKPGSPDNLRTVTKRENMENPEISKDVPARKRKTLID 217

Query: 188 CAKPVSNGVNGNSSTMLGTGLLSSAKRLSLSDSD--SDNMDEDYKTFLTDFLCDDRRYQL 247
                 N +  + S    + +LSS++     +++     +DE YKTFL     D +    
Sbjct: 218 ------NKLRPDLSKKASSRVLSSSEPKCKHETEPCDTGIDESYKTFLECIKEDGKYLVF 277

Query: 248 MPPDGRRFVYEHDG-SISKSEVVKMNTDSCKRSSARFGRKYLRSAMDIDSGKSLQSPGIY 307
           +   G+R  YE D  S S+SE++  ++D C                D    K+    G  
Sbjct: 278 VNKHGKRVKYEEDEESESESEILAADSDPC----------ITPKLFDSSRIKNRNRTG-- 337

Query: 308 KSSNFRERLIKVLQKPYDQREYDFFLQEVGRRRPHVRHRELRSRVLKPYTLESRAKSYLH 367
             S FR+ L+ +L+KPYDQ EY+  LQE+ +R+P  RHR+LR R+ K Y++E  +KSYL 
Sbjct: 338 -HSQFRDNLMVILKKPYDQLEYEELLQEIIQRKPLERHRDLRGRI-KSYSVEICSKSYLD 397

Query: 368 LYDDLAMKIQSVQYDCPRTLNLLRGFFYWLQNLSHEDAFQPWMDPSCLNI 406
            + DL  KI +VQ D  + LNLLRGFFYWL+NLSHE AFQPW D SCL +
Sbjct: 398 HHTDLKRKIDAVQGDHCKILNLLRGFFYWLKNLSHEGAFQPWSDASCLKM 417

The following BLAST results are available for this feature:

BLAST of CmoCh01G010730.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G010730.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3W2_CUCSA	2.8e-104	55.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G221350 PE=4 SV=1	[more]
F6H0H5_VITVI	7.8e-46	33.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01650 PE=4 SV=...	[more]
A0A067GYP6_CITSI	6.2e-27	38.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017705mg PE=4 SV=1	[more]
V4V677_9ROSI	6.2e-27	38.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000428mg PE=4 SV=1	[more]
A0A067GYA6_CITSI	1.2e-25	38.73	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017705mg PE=4 SV=1	[more]

BLAST of CmoCh01G010730.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77270.1	9.9e-16	37.61	unknown protein	[more]
AT1G21560.2	4.6e-13	26.77	unknown protein	[more]
AT4G01170.1	3.3e-11	33.61	unknown protein	[more]
AT3G07730.1	4.3e-11	33.88	unknown protein	[more]

BLAST of CmoCh01G010730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092745\|ref\|XP_008447196.1\|	6.5e-110	57.32	PREDICTED: uncharacterized protein LOC103489706 isoform X1 [Cucumis melo]	[more]
gi\|659092749\|ref\|XP_008447198.1\|	7.9e-108	60.33	PREDICTED: uncharacterized protein LOC103489706 isoform X3 [Cucumis melo]	[more]
gi\|778725774\|ref\|XP_004139802.2\|	4.1e-104	55.64	PREDICTED: uncharacterized protein LOC101206512 [Cucumis sativus]	[more]
gi\|659092747\|ref\|XP_008447197.1\|	1.1e-96	55.50	PREDICTED: uncharacterized protein LOC103489706 isoform X2 [Cucumis melo]	[more]
gi\|731427921\|ref\|XP_010664153.1\|	1.1e-45	33.17	PREDICTED: uncharacterized protein LOC100257388 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh01G010730	CmoCh01G010730	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh01G010730.1	CmoCh01G010730.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G010730.1.exon.5	CmoCh01G010730.1.exon.5	exon
CmoCh01G010730.1.exon.4	CmoCh01G010730.1.exon.4	exon
CmoCh01G010730.1.exon.3	CmoCh01G010730.1.exon.3	exon
CmoCh01G010730.1.exon.2	CmoCh01G010730.1.exon.2	exon
CmoCh01G010730.1.exon.1	CmoCh01G010730.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G010730.1.five_prime_UTR.1	CmoCh01G010730.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh01G010730.1.CDS.1	CmoCh01G010730.1.CDS.1	CDS
CmoCh01G010730.1.CDS.2	CmoCh01G010730.1.CDS.2	CDS
CmoCh01G010730.1.CDS.3	CmoCh01G010730.1.CDS.3	CDS
CmoCh01G010730.1.CDS.4	CmoCh01G010730.1.CDS.4	CDS
CmoCh01G010730.1.CDS.5	CmoCh01G010730.1.CDS.5	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34194	FAMILY NOT NAMED	coord: 91..414 score: 9.8
None	No IPR available	PANTHER	PTHR34194:SF2	SUBFAMILY NOT NAMED	coord: 91..414 score: 9.8