CmoCh01G004710.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G004710.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCONSTANS
LocationCmo_Chr01 : 2251358 .. 2252332 (-)
Sequence length975
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAAACAGAGGACGACTACTTCGGCGGAGCCGCCGCCACTGCCACTGCCACCACCGCCGTAATATGCGAGGCATGCGAGAGATCCCCAGCTGTATTCATCTGCAAAGCGGACGCTGCCTCGCTCTGCGCCGCCTGCGATGCCGAGATTCACTCGGCGAATCCTCTCGCCCGCCGTCACCACCGTGTCCCAATTGGTGGCGCTGACATGGTCGGGACTACTCCGGAATGTCAGGAAGATGAAGACGAGGACGAGGCTGCTTCATGGCTGCTGTTGAATCCATTGAAGACCAACAACGAAAACAGAGGAGGTGGTTCGATACAGAGCAATAACAATACGAATGGGTTGTTTTTGTTGGGTGGGGAAGATGATTATTTGAATTTTGTGGAGTTTAATGGATGTGGGGAAGATCAATTTGAGGGGTCGGAGAATTATGGCGGCGGCGGAGGAGGAGGAGGAGAGGACAGAGTGGTGCCGATTGAATTTGAAGGGAAAGATCCGATGTTGGAACAGAGCTACGGCGGCGTTGATGGGAGCTACTCCTACAATGGCTTCCTCACCCACGCTGTAACCTCCCTACCTACCTCTCTCTTACCTTCATCAATGGAGGTCGGCGTAGTACCAGATTCAGCAACAACCATGAGCGACATATCCGTATTCTCCAACATAAGGCCACCAAAAGGAACAATCGATCTCTTCTCCGGCGCGGCGGACGTGGCGGCGGTTCAGATGCCGGCGACCCAATTGTGTCCAATGGACAGAGAAGCCCGAGTGTTACGGTACAGAGAGAAGAAGAAGACAAGGAAGTTTGAGAAGACCATTAGATACGCGTCTAGAAAGGCCTACGCCGAGACCCGGCCGAGAATCAAGGGCCGGTTCGCGAAACGAACCGATGTGGAGGTTAAACTCGACCGGAAATTCTCCAGCCCTTTAATGGCGAACGTTGGATATGGGATTGTGCCTTCGTTTTGA

mRNA sequence

ATGTTGAAAACAGAGGACGACTACTTCGGCGGAGCCGCCGCCACTGCCACTGCCACCACCGCCGTAATATGCGAGGCATGCGAGAGATCCCCAGCTGTATTCATCTGCAAAGCGGACGCTGCCTCGCTCTGCGCCGCCTGCGATGCCGAGATTCACTCGGCGAATCCTCTCGCCCGCCGTCACCACCGTGTCCCAATTGGTGGCGCTGACATGGTCGGGACTACTCCGGAATGTCAGGAAGATGAAGACGAGGACGAGGCTGCTTCATGGCTGCTGTTGAATCCATTGAAGACCAACAACGAAAACAGAGGAGGTGGTTCGATACAGAGCAATAACAATACGAATGGGTTGTTTTTGTTGGGTGGGGAAGATGATTATTTGAATTTTGTGGAGTTTAATGGATGTGGGGAAGATCAATTTGAGGGGTCGGAGAATTATGGCGGCGGCGGAGGAGGAGGAGGAGAGGACAGAGTGGTGCCGATTGAATTTGAAGGGAAAGATCCGATGTTGGAACAGAGCTACGGCGGCGTTGATGGGAGCTACTCCTACAATGGCTTCCTCACCCACGCTGTAACCTCCCTACCTACCTCTCTCTTACCTTCATCAATGGAGGTCGGCGTAGTACCAGATTCAGCAACAACCATGAGCGACATATCCGTATTCTCCAACATAAGGCCACCAAAAGGAACAATCGATCTCTTCTCCGGCGCGGCGGACGTGGCGGCGGTTCAGATGCCGGCGACCCAATTGTGTCCAATGGACAGAGAAGCCCGAGTGTTACGGTACAGAGAGAAGAAGAAGACAAGGAAGTTTGAGAAGACCATTAGATACGCGTCTAGAAAGGCCTACGCCGAGACCCGGCCGAGAATCAAGGGCCGGTTCGCGAAACGAACCGATGTGGAGGTTAAACTCGACCGGAAATTCTCCAGCCCTTTAATGGCGAACGTTGGATATGGGATTGTGCCTTCGTTTTGA

Coding sequence (CDS)

ATGTTGAAAACAGAGGACGACTACTTCGGCGGAGCCGCCGCCACTGCCACTGCCACCACCGCCGTAATATGCGAGGCATGCGAGAGATCCCCAGCTGTATTCATCTGCAAAGCGGACGCTGCCTCGCTCTGCGCCGCCTGCGATGCCGAGATTCACTCGGCGAATCCTCTCGCCCGCCGTCACCACCGTGTCCCAATTGGTGGCGCTGACATGGTCGGGACTACTCCGGAATGTCAGGAAGATGAAGACGAGGACGAGGCTGCTTCATGGCTGCTGTTGAATCCATTGAAGACCAACAACGAAAACAGAGGAGGTGGTTCGATACAGAGCAATAACAATACGAATGGGTTGTTTTTGTTGGGTGGGGAAGATGATTATTTGAATTTTGTGGAGTTTAATGGATGTGGGGAAGATCAATTTGAGGGGTCGGAGAATTATGGCGGCGGCGGAGGAGGAGGAGGAGAGGACAGAGTGGTGCCGATTGAATTTGAAGGGAAAGATCCGATGTTGGAACAGAGCTACGGCGGCGTTGATGGGAGCTACTCCTACAATGGCTTCCTCACCCACGCTGTAACCTCCCTACCTACCTCTCTCTTACCTTCATCAATGGAGGTCGGCGTAGTACCAGATTCAGCAACAACCATGAGCGACATATCCGTATTCTCCAACATAAGGCCACCAAAAGGAACAATCGATCTCTTCTCCGGCGCGGCGGACGTGGCGGCGGTTCAGATGCCGGCGACCCAATTGTGTCCAATGGACAGAGAAGCCCGAGTGTTACGGTACAGAGAGAAGAAGAAGACAAGGAAGTTTGAGAAGACCATTAGATACGCGTCTAGAAAGGCCTACGCCGAGACCCGGCCGAGAATCAAGGGCCGGTTCGCGAAACGAACCGATGTGGAGGTTAAACTCGACCGGAAATTCTCCAGCCCTTTAATGGCGAACGTTGGATATGGGATTGTGCCTTCGTTTTGA
Homology
[Close]
BLAST of CmoCh01G004710.1 vs. Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 8.5e-59
Identity = 158/320 (49.38%), Postives = 197/320 (61.56%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI------GGADMVGTTP 82
           +C++CE +PA F+CKADAASLC ACDAEIHSANPLARRH RVPI        + M  +  
Sbjct: 58  VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET 117

Query: 83  ECQEDEDEDEAASWLLLNPLKT-NNENRGGGSIQSNNNTNGLFLLGGEDDYLNFVEFNGC 142
           +   DED+ E ASWLL NP K   N+N G             FL G E  YL+ V+++  
Sbjct: 118 DADNDEDDREVASWLLPNPGKNIGNQNNG-------------FLFGVE--YLDLVDYSSS 177

Query: 143 GEDQFEGSE--NYGGGGGGGGEDRVVPIEFEGKDPMLEQS---------YGGVDGSYSYN 202
            ++QFE ++  +Y    GG G   VVP++ E     L+QS         YG   G++ YN
Sbjct: 178 MDNQFEDNQYTHYQRSFGGDG---VVPLQVEESTSHLQQSQQNFQLGINYGFSSGAH-YN 237

Query: 203 GFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSNIRPPKGTIDLFSGAADVAAVQ 262
               +++  L  S   SSM++ VVP+S  T SDI+V  + R  K TID  SG      VQ
Sbjct: 238 ---NNSLKDLNHSASVSSMDISVVPES--TASDITV-QHPRTTKETIDQLSG-PPTQVVQ 297

Query: 263 MPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVKL 322
               QL PM+REARVLRYREKKKTRKF+KTIRYASRKAYAE RPRIKGRFAKR + E + 
Sbjct: 298 ----QLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEA 347

Query: 323 DRKFSSPLMANVGYGIVPSF 325
           +  FS+ LM+  GYGIVPSF
Sbjct: 358 EEIFSTSLMSETGYGIVPSF 347

[Close]
BLAST of CmoCh01G004710.1 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.3e-54
Identity = 151/335 (45.07%), Postives = 185/335 (55.22%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI--------------GG 82
           +C++CER+PA F CKADAASLC  CD+EIHSANPLARRH RVPI                
Sbjct: 54  VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHS 113

Query: 83  ADMVGTTPEC-------QEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLLG 142
            +   T PE        +EDEDE EAASWLL N  K +  N G             F +G
Sbjct: 114 CETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNG-------------FSIG 173

Query: 143 GEDDYLNFVEFNGCGEDQFEGSENY----GGGGGGGGEDRVVPIEFEGKDPMLEQ----- 202
             D++LN V+++   +   + S  Y           GED VVP++ E    M ++     
Sbjct: 174 --DEFLNLVDYSSSDKQFTDQSNQYQLDCNVPQRSYGEDGVVPLQIEVSKGMYQEQQNFQ 233

Query: 203 ---SYGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSNIRPPKG 262
              + G      S NG L+H V         SSM++GVVP+S T  SD +V SN R PK 
Sbjct: 234 LSINCGSWGALRSSNGSLSHMVN-------VSSMDLGVVPESTT--SDATV-SNPRSPKA 293

Query: 263 TIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 322
             D             PA  L P DREARVLRYREKKK RKFEKTIRYASRKAYAE RPR
Sbjct: 294 VTD--------QPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPR 353

Query: 323 IKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           IKGRFAK+ DV+ + ++ FS+ +  + GYGIVPSF
Sbjct: 354 IKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

[Close]
BLAST of CmoCh01G004710.1 vs. Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.3e-54
Identity = 151/341 (44.28%), Postives = 190/341 (55.72%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI----GGADMVGTTPEC 82
           +CE+CER+PA F+C+AD ASLC ACD+E+HSANPLARRH RVPI    G +    TT   
Sbjct: 62  VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHH 121

Query: 83  QE---------------------DEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGL 142
           Q                      D+D  E ASWL  N  K NN           N  NGL
Sbjct: 122 QSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNN-----------NQNNGL 181

Query: 143 FLLGGEDDYLNFVEFNGCGEDQFEGS-----ENYGGGGGGGGEDRVVPIEFE---GKDPM 202
                 D+YLN V++N   + +F G      +N        G DRVVP++ E   G    
Sbjct: 182 LF---SDEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLKLEESRGHQCH 241

Query: 203 LEQS------YGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSN 262
            +Q+      YG     Y+ NG + H       +   SSME GVVP+S      ++  S+
Sbjct: 242 NQQNFQFNIKYGSSGTHYNDNGSINH-------NAYISSMETGVVPESTAC---VTTASH 301

Query: 263 IRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAY 322
            R PKGT++      D A+  +  TQL PMDREARVLRYREK+KTRKFEKTIRYASRKAY
Sbjct: 302 PRTPKGTVE---QQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAY 361

Query: 323 AETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           AE RPR+ GRFAKR ++E + ++ F++ LM N GYGIVPSF
Sbjct: 362 AEIRPRVNGRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF 373

[Close]
BLAST of CmoCh01G004710.1 vs. Swiss-Prot
Match: HD1_ORYSJ (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 9.8e-47
Identity = 135/329 (41.03%), Postives = 183/329 (55.62%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPIGGADMVGTTPECQEDE 82
           +CEACER+PA   C+ADAA+LC ACD ++HSANPL           A+ V  T     D+
Sbjct: 77  VCEACERAPAALACRADAAALCVACDVQVHSANPLPAITIPATSVLAEAVVATATVLGDK 136

Query: 83  DEDEAASWLLL-------NPLKTNNENRGGGSIQSNNNTNGLFLLGGEDDYLNFVEFNGC 142
           DE E  SWLLL       N    NN+N    +  SN++ NG++  G  D+Y + V +N  
Sbjct: 137 DE-EVDSWLLLSKDSDNNNNNNNNNDNDNNDNNNSNSSNNGMYF-GEVDEYFDLVGYNSY 196

Query: 143 GEDQFEGSENYGGG------------------GGGGGEDRVVPIEFEGKDPMLEQSYG-- 202
            +++ E +++   G                      G + VVP +           YG  
Sbjct: 197 YDNRIENNQDRQYGMHEQQEQQQQQQEMQKEFAEKEGSECVVPSQITMLSEQQHSGYGVV 256

Query: 203 GVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSNIRPPKGTIDLFS 262
           G D + S    ++    S+  S+  SSME G+VPDS  T+ D+   S I  P G I+LFS
Sbjct: 257 GADQAASMTAGVSAYTDSISNSISFSSMEAGIVPDS--TVIDMPN-SRILTPAGAINLFS 316

Query: 263 GAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFA 322
           G +    +QM +     MDREARVLRYREKKK RKFEKTIRY +RKAYAE RPRIKGRFA
Sbjct: 317 GPS----LQM-SLHFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFA 376

Query: 323 KRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           KR+DV++++D+ FS+  +++  YG VP F
Sbjct: 377 KRSDVQIEVDQMFSTAALSDGSYGTVPWF 395

[Close]
BLAST of CmoCh01G004710.1 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-39
Identity = 136/342 (39.77%), Postives = 175/342 (51.17%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPIG------GAD------ 82
           +CE CE++PA   CKADAA+LC  CD +IHSANPLARRH RVP+        +D      
Sbjct: 48  MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHT 107

Query: 83  MVGTTPEC---------QEDEDEDEAASWLLL-NPLKTNNENRGGGSIQSNN-------- 142
            V    +C           +E+E+EAASWLLL NP  T     G  ++ S          
Sbjct: 108 AVNFLDDCYFSDIDGNGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPE 167

Query: 143 -NTNGLFLLGGEDDYLNFVEFNGCGEDQFEGSENYGGGGGGGGEDRVVPIEFEG------ 202
            NT   +L    D YL+    N   + + E  E         G D VVP+E         
Sbjct: 168 MNTGQQYLFSDPDPYLDLDYGNV--DPKVESLEQ-----NSSGTDGVVPVENRTVRIPTV 227

Query: 203 KDPMLEQSYGGVDGSYSYNG---FLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFS 262
            +   E  + G    ++Y G    ++H+V+S       SSMEVGVVPD  + ++D+S   
Sbjct: 228 NENCFEMDFTGGSKGFTYGGGYNCISHSVSS-------SSMEVGVVPDGGS-VADVSY-- 287

Query: 263 NIRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKA 322
              P  G     SGA       +P T     +REARV+RYREK+K RKFEKTIRYASRKA
Sbjct: 288 ---PYGGPAT--SGADPGTQRAVPLTSA---EREARVMRYREKRKNRKFEKTIRYASRKA 347

Query: 323 YAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           YAE RPRIKGRFAKRTD     D      + +  G+G+VP+F
Sbjct: 348 YAEMRPRIKGRFAKRTDTNESNDVVGHGGIFS--GFGLVPTF 362

[Close]
BLAST of CmoCh01G004710.1 vs. TrEMBL
Match: A0A0A0KY36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 9.4e-97
Identity = 231/366 (63.11%), Postives = 255/366 (69.67%), Query Frame = 1 

Query: 1   MLKTEDDYFGGAAATATATTAVICEACERSPAVFICKADAASLCAACDAEIHSANPLARR 60
           MLKTED+Y G          AVICEACER PA FICKADAASLCAACDAEIHSANPLARR
Sbjct: 1   MLKTEDEYRGSGG---NGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARR 60

Query: 61  HHRVPIGGADMVGTTPECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLL 120
           H RVPI      G      E+EDE+EAASWLL+NP K NN+N+      +NNN NG+FLL
Sbjct: 61  HQRVPISRG---GAMFRSVEEEDEEEAASWLLMNPGK-NNDNKN----NNNNNNNGMFLL 120

Query: 121 GGE----DDYLNFVEFNGCGE---DQFEGSENYGGGGGGGGEDRVVPI-EFEGK------ 180
            GE    D+YL FVEFNG  E   D+FE  +N   GGGG   D VVPI +FEG       
Sbjct: 121 SGEDEEDDEYLKFVEFNGNNEEDDDEFETLKNNNYGGGG---DSVVPIDQFEGNKNHDHH 180

Query: 181 -------------DPMLEQSYGG-VDG----------SYSYNGFLTHAVTSLPTSLLPSS 240
                        + +LEQSYGG VD           S+SYNGFLTHA++        SS
Sbjct: 181 LHHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAIS-------VSS 240

Query: 241 MEVGVVPDS-ATTMSDISVFSNIRPPKGTIDLFSG---AADVAAVQMPATQLCPMDREAR 300
           MEVGVVP+S AT MSDIS+ SN+RPPKGTIDLFSG   A   AA QMPA QL PMDREAR
Sbjct: 241 MEVGVVPESTATIMSDISI-SNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREAR 300

Query: 301 VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGY 325
           VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV+LDRK+S+PLM + GY
Sbjct: 301 VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGY 344

[Close]
BLAST of CmoCh01G004710.1 vs. TrEMBL
Match: F6GVT3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00640 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 3.0e-79
Identity = 193/347 (55.62%), Postives = 226/347 (65.13%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI--------------GG 82
           +CE+CER+PA F+CKADAASLCA CDA+IHSANPLARRHHRVP+               G
Sbjct: 65  VCESCERAPAAFVCKADAASLCATCDADIHSANPLARRHHRVPVLPIAGCLYGPPATDPG 124

Query: 83  ADMVGTTPECQ------------EDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNG 142
             +V +  E              ++EDEDEAASWLLLNP+K NN     GS  SNN  NG
Sbjct: 125 GTVVRSAAEADNGFLGQEAEETIDEEDEDEAASWLLLNPVKNNN-----GS--SNNQNNG 184

Query: 143 LFLLGGEDDYLNFVEFNGCGEDQFEGSEN-------YGGGGGGGGEDRVVPIEF-EGKDP 202
           L   G  D+YL+ VE+N C E+QF    N       Y       G DRVVP++  E K  
Sbjct: 185 LLFGGEVDEYLDLVEYNSCPENQFSDQYNQQQPPPHYSVPHKNYGGDRVVPVQCGEAKGQ 244

Query: 203 MLEQ----------SYGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDI 262
           + +Q           Y     +YSYN  ++H+V+        SSM+VGVVP+ ATTMSDI
Sbjct: 245 LHQQHQQQGFHLGMEYESSKAAYSYNPSISHSVS-------VSSMDVGVVPE-ATTMSDI 304

Query: 263 SV-FSNIRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRY 322
           S+  S+ RPPKGTIDLFSG      +QMP TQL PMDREARVLRYREKKKTRKFEKTIRY
Sbjct: 305 SISISHPRPPKGTIDLFSG----PPIQMP-TQLTPMDREARVLRYREKKKTRKFEKTIRY 364

Query: 323 ASRKAYAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           ASRKAYAETRPRIKGRFAKRTDVEV++D+ FS+ LMA  GYGIVPSF
Sbjct: 365 ASRKAYAETRPRIKGRFAKRTDVEVEVDQMFSTTLMAESGYGIVPSF 391

[Close]
BLAST of CmoCh01G004710.1 vs. TrEMBL
Match: W9S2Z3_9ROSA (Zinc finger protein CONSTANS-LIKE 2 OS=Morus notabilis GN=L484_009669 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 5.7e-78
Identity = 196/342 (57.31%), Postives = 230/342 (67.25%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI-----------GGADM 82
           +CEACER+PA FICKADAASLCA+CDA+IHSANPLARRHHRVP+             A  
Sbjct: 61  VCEACERAPAAFICKADAASLCASCDADIHSANPLARRHHRVPVLPISGCVYGPSAAAAA 120

Query: 83  VGTTPECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTN--GLFLLGGE-DDYLN 142
            G      +D DEDE ASWLLLNP+K    N  G +  +NNN N  G FL G E D+YL+
Sbjct: 121 AGEDDVFDDDNDEDETASWLLLNPIKAGINNHQGINTNNNNNNNNNGSFLFGAEVDEYLD 180

Query: 143 FVEFNGC---GEDQF---------EGSENYGGGGG--GGGEDRVVPIEF---EGKDPMLE 202
            VE+N     G DQF         +   +YG      GGG D VVP++    +G+  M  
Sbjct: 181 LVEYNSSTTTGTDQFGDHHELMNNQQMSSYGDPQKTYGGGGDSVVPVQCGDGKGQIMMPH 240

Query: 203 QSYG---GVD-----GSYS-YNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFS 262
            S+G   G++      +YS YNG ++H+V+        SSM+V VVPDS  TMSDIS+ S
Sbjct: 241 ISHGFQLGLEFDSPKSTYSNYNGSISHSVSI-------SSMDVSVVPDS--TMSDISI-S 300

Query: 263 NIRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKA 322
           + RPPKGTIDLFSG A    VQMPA QL PMDREARVLRYREKKKTRKFEKTIRYASRKA
Sbjct: 301 HPRPPKGTIDLFSGPA----VQMPA-QLTPMDREARVLRYREKKKTRKFEKTIRYASRKA 360

Query: 323 YAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           YAETRPRIKGRFAKRTDVEV++D+ FS+ LM + GYGIVPSF
Sbjct: 361 YAETRPRIKGRFAKRTDVEVEVDQMFSTTLMVDTGYGIVPSF 387

[Close]
BLAST of CmoCh01G004710.1 vs. TrEMBL
Match: B6VEH4_FRAAN (CONSTANS OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.3e-77
Identity = 189/341 (55.43%), Postives = 227/341 (66.57%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI----GGADMVGTTP-- 82
           +CEACER+PA F+CKADAASLC ACDA+IHSANPLARRH RVPI    G   MVG+TP  
Sbjct: 61  VCEACERAPAAFLCKADAASLCTACDADIHSANPLARRHQRVPILPISGCQIMVGSTPAD 120

Query: 83  -------------ECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLLGGE 142
                        E  ++EDEDEAASWLLLNP+K +N N    +   NNN NG FL G E
Sbjct: 121 TTEDGFLSQEGDEEVMDEEDEDEAASWLLLNPVKNSN-NHNSNNNNPNNNNNG-FLFGVE 180

Query: 143 -DDYLNFVEFNGCGEDQFEGS------ENYGGGGG-GGGEDRVVPIEF-EGKDPMLEQS- 202
            D+YL+ VE+N   ++QF G+       NYG       G D VVP+++ EGK   ++   
Sbjct: 181 VDEYLDLVEYNSSDQNQFSGTTATNDQHNYGVPHKISYGGDSVVPVQYGEGKVTQMQMQQ 240

Query: 203 ----------YGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSN 262
                     Y     +Y Y+G ++H V+        SSM+VGVVPDS  TMS++SV  +
Sbjct: 241 KHNFHQLGMEYESSKAAYGYDGSISHTVSV-------SSMDVGVVPDS--TMSEMSV-CH 300

Query: 263 IRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAY 322
            R PKGTIDLF+G      +QMP TQL PMDREARVLRYREKKKTRKFEKTIRYASRKAY
Sbjct: 301 PRTPKGTIDLFNGPT----IQMP-TQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAY 360

Query: 323 AETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           AETRPRIKGRFAKRTD+EV++D+ FS+ LM   GYGIVPS+
Sbjct: 361 AETRPRIKGRFAKRTDIEVEVDQMFSTSLMGETGYGIVPSY 384

[Close]
BLAST of CmoCh01G004710.1 vs. TrEMBL
Match: I3QIJ8_FRAAN (CONSTANTS-like protein OS=Fragaria ananassa GN=CO-2 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 5.4e-76
Identity = 184/340 (54.12%), Postives = 222/340 (65.29%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI----GGADMVGTTP-- 82
           +CEACER+PA F+CKADAASLC ACDA+IHSANPLARRH RVPI    G   MVG+ P  
Sbjct: 62  VCEACERAPAAFLCKADAASLCTACDADIHSANPLARRHQRVPILPISGSQIMVGSAPAD 121

Query: 83  -------------ECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLLGGE 142
                        E  ++EDEDEAASWLLLNP+K +N +        NNN NG F     
Sbjct: 122 TTEDGFLSQEGDEEAMDEEDEDEAASWLLLNPVKNSNNHNN-----PNNNNNGFFFGVEV 181

Query: 143 DDYLNFVEFNGCGEDQFEGS------ENYGGGGG-GGGEDRVVPIEF-EGKDPMLEQS-- 202
           D+YL+FVE+N   ++Q  G+       NYG       G D VVP+++ EGK   ++    
Sbjct: 182 DEYLDFVEYNSSDQNQLGGTTATNDQHNYGVPHKISYGGDSVVPVQYGEGKVTQMQMQQK 241

Query: 203 ---------YGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSNI 262
                    Y     +Y Y+G ++H V+        SSM+VGVVPDS  TMS++SV  + 
Sbjct: 242 HNFHQLGMEYESSKAAYGYDGSISHTVSV-------SSMDVGVVPDS--TMSEMSV-CHP 301

Query: 263 RPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYA 322
           R PKGTIDLF+G      +QMP TQL PMDREARVLRYREKKKTRKFEKTIRYASRKAYA
Sbjct: 302 RTPKGTIDLFNGPT----IQMP-TQLSPMDREARVLRYREKKKTRKFEKTIRYASRKAYA 361

Query: 323 ETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           ETRPRIKGRFAKRTD+EV++D+ FS+ LM   GYGIVPS+
Sbjct: 362 ETRPRIKGRFAKRTDIEVEVDQMFSTSLMRETGYGIVPSY 381

[Close]
BLAST of CmoCh01G004710.1 vs. TAIR10
Match: AT3G02380.1 (AT3G02380.1 CONSTANS-like 2)

HSP 1 Score: 228.8 bits (582), Expect = 4.8e-60
Identity = 158/320 (49.38%), Postives = 197/320 (61.56%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI------GGADMVGTTP 82
           +C++CE +PA F+CKADAASLC ACDAEIHSANPLARRH RVPI        + M  +  
Sbjct: 58  VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSET 117

Query: 83  ECQEDEDEDEAASWLLLNPLKT-NNENRGGGSIQSNNNTNGLFLLGGEDDYLNFVEFNGC 142
           +   DED+ E ASWLL NP K   N+N G             FL G E  YL+ V+++  
Sbjct: 118 DADNDEDDREVASWLLPNPGKNIGNQNNG-------------FLFGVE--YLDLVDYSSS 177

Query: 143 GEDQFEGSE--NYGGGGGGGGEDRVVPIEFEGKDPMLEQS---------YGGVDGSYSYN 202
            ++QFE ++  +Y    GG G   VVP++ E     L+QS         YG   G++ YN
Sbjct: 178 MDNQFEDNQYTHYQRSFGGDG---VVPLQVEESTSHLQQSQQNFQLGINYGFSSGAH-YN 237

Query: 203 GFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSNIRPPKGTIDLFSGAADVAAVQ 262
               +++  L  S   SSM++ VVP+S  T SDI+V  + R  K TID  SG      VQ
Sbjct: 238 ---NNSLKDLNHSASVSSMDISVVPES--TASDITV-QHPRTTKETIDQLSG-PPTQVVQ 297

Query: 263 MPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVKL 322
               QL PM+REARVLRYREKKKTRKF+KTIRYASRKAYAE RPRIKGRFAKR + E + 
Sbjct: 298 ----QLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEA 347

Query: 323 DRKFSSPLMANVGYGIVPSF 325
           +  FS+ LM+  GYGIVPSF
Sbjct: 358 EEIFSTSLMSETGYGIVPSF 347

[Close]
BLAST of CmoCh01G004710.1 vs. TAIR10
Match: AT5G15850.1 (AT5G15850.1 CONSTANS-like 1)

HSP 1 Score: 212.6 bits (540), Expect = 3.6e-55
Identity = 151/335 (45.07%), Postives = 185/335 (55.22%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI--------------GG 82
           +C++CER+PA F CKADAASLC  CD+EIHSANPLARRH RVPI                
Sbjct: 54  VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHS 113

Query: 83  ADMVGTTPEC-------QEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLLG 142
            +   T PE        +EDEDE EAASWLL N  K +  N G             F +G
Sbjct: 114 CETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNG-------------FSIG 173

Query: 143 GEDDYLNFVEFNGCGEDQFEGSENY----GGGGGGGGEDRVVPIEFEGKDPMLEQ----- 202
             D++LN V+++   +   + S  Y           GED VVP++ E    M ++     
Sbjct: 174 --DEFLNLVDYSSSDKQFTDQSNQYQLDCNVPQRSYGEDGVVPLQIEVSKGMYQEQQNFQ 233

Query: 203 ---SYGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSNIRPPKG 262
              + G      S NG L+H V         SSM++GVVP+S T  SD +V SN R PK 
Sbjct: 234 LSINCGSWGALRSSNGSLSHMVN-------VSSMDLGVVPESTT--SDATV-SNPRSPKA 293

Query: 263 TIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPR 322
             D             PA  L P DREARVLRYREKKK RKFEKTIRYASRKAYAE RPR
Sbjct: 294 VTD--------QPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPR 353

Query: 323 IKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           IKGRFAK+ DV+ + ++ FS+ +  + GYGIVPSF
Sbjct: 354 IKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

[Close]
BLAST of CmoCh01G004710.1 vs. TAIR10
Match: AT5G15840.1 (AT5G15840.1 B-box type zinc finger protein with CCT domain)

HSP 1 Score: 212.2 bits (539), Expect = 4.7e-55
Identity = 151/341 (44.28%), Postives = 190/341 (55.72%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI----GGADMVGTTPEC 82
           +CE+CER+PA F+C+AD ASLC ACD+E+HSANPLARRH RVPI    G +    TT   
Sbjct: 62  VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHH 121

Query: 83  QE---------------------DEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGL 142
           Q                      D+D  E ASWL  N  K NN           N  NGL
Sbjct: 122 QSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNN-----------NQNNGL 181

Query: 143 FLLGGEDDYLNFVEFNGCGEDQFEGS-----ENYGGGGGGGGEDRVVPIEFE---GKDPM 202
                 D+YLN V++N   + +F G      +N        G DRVVP++ E   G    
Sbjct: 182 LF---SDEYLNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLKLEESRGHQCH 241

Query: 203 LEQS------YGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSN 262
            +Q+      YG     Y+ NG + H       +   SSME GVVP+S      ++  S+
Sbjct: 242 NQQNFQFNIKYGSSGTHYNDNGSINH-------NAYISSMETGVVPESTAC---VTTASH 301

Query: 263 IRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAY 322
            R PKGT++      D A+  +  TQL PMDREARVLRYREK+KTRKFEKTIRYASRKAY
Sbjct: 302 PRTPKGTVE---QQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAY 361

Query: 323 AETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           AE RPR+ GRFAKR ++E + ++ F++ LM N GYGIVPSF
Sbjct: 362 AEIRPRVNGRFAKR-EIEAE-EQGFNTMLMYNTGYGIVPSF 373

[Close]
BLAST of CmoCh01G004710.1 vs. TAIR10
Match: AT5G24930.1 (AT5G24930.1 CONSTANS-like 4)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-40
Identity = 136/342 (39.77%), Postives = 175/342 (51.17%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPIG------GAD------ 82
           +CE CE++PA   CKADAA+LC  CD +IHSANPLARRH RVP+        +D      
Sbjct: 92  MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHT 151

Query: 83  MVGTTPEC---------QEDEDEDEAASWLLL-NPLKTNNENRGGGSIQSNN-------- 142
            V    +C           +E+E+EAASWLLL NP  T     G  ++ S          
Sbjct: 152 AVNFLDDCYFSDIDGNGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPE 211

Query: 143 -NTNGLFLLGGEDDYLNFVEFNGCGEDQFEGSENYGGGGGGGGEDRVVPIEFEG------ 202
            NT   +L    D YL+    N   + + E  E         G D VVP+E         
Sbjct: 212 MNTGQQYLFSDPDPYLDLDYGNV--DPKVESLEQ-----NSSGTDGVVPVENRTVRIPTV 271

Query: 203 KDPMLEQSYGGVDGSYSYNG---FLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFS 262
            +   E  + G    ++Y G    ++H+V+S       SSMEVGVVPD  + ++D+S   
Sbjct: 272 NENCFEMDFTGGSKGFTYGGGYNCISHSVSS-------SSMEVGVVPDGGS-VADVSY-- 331

Query: 263 NIRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKA 322
              P  G     SGA       +P T     +REARV+RYREK+K RKFEKTIRYASRKA
Sbjct: 332 ---PYGGPAT--SGADPGTQRAVPLTSA---EREARVMRYREKRKNRKFEKTIRYASRKA 391

Query: 323 YAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           YAE RPRIKGRFAKRTD     D      + +  G+G+VP+F
Sbjct: 392 YAEMRPRIKGRFAKRTDTNESNDVVGHGGIFS--GFGLVPTF 406

[Close]
BLAST of CmoCh01G004710.1 vs. TAIR10
Match: AT5G57660.1 (AT5G57660.1 CONSTANS-like 5)

HSP 1 Score: 149.1 bits (375), Expect = 4.8e-36
Identity = 123/330 (37.27%), Postives = 164/330 (49.70%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI---------------- 82
           +CE CE++PA   CKADAA+LC +CDA+IHSANPLA RH RVP+                
Sbjct: 60  VCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISA 119

Query: 83  -------GGADMVGTTPECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFL 142
                  G +  V  T       D+     WLL N              +      G   
Sbjct: 120 SSTFGILGSSTTVDLT-AVPVMADDLGLCPWLLPNDFN-----------EPAKIEIGTEN 179

Query: 143 LGGEDDYLNFVEFNGCGEDQFEGSENYGGGGGGGGEDRVVPIEFEGKD-PMLEQSY-GGV 202
           + G  D++ F +F+   + +F  S N+     GG  D +VP++ + +  P+    +   +
Sbjct: 180 MKGSSDFM-FSDFDRLIDFEFPNSFNHHQNNAGG--DSLVPVQTKTEPLPLTNNDHCFDI 239

Query: 203 DGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISVFSNIRPPKGTIDLFSGA 262
           D   S     T+   S+  S+  SS+E GVVPD  T         N    + TI   +  
Sbjct: 240 DFCRSKLSAFTYPSQSVSHSVSTSSIEYGVVPDGNT---------NNSVNRSTITSSTTG 299

Query: 263 ADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKR 322
            D         Q   MDREARVLRYREK+K RKFEKTIRYASRKAYAE+RPRIKGRFAKR
Sbjct: 300 GD--------HQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKR 355

Query: 323 TDVE---VKLDRKFSSPLMANVGYGIVPSF 325
           T+ E   + L   ++S   A+  YG+VP+F
Sbjct: 360 TETENDDIFLSHVYAS--AAHAQYGVVPTF 355

[Close]
BLAST of CmoCh01G004710.1 vs. NCBI nr
Match: gi|659111102|ref|XP_008455579.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo])

HSP 1 Score: 367.1 bits (941), Expect = 3.2e-98
Identity = 232/371 (62.53%), Postives = 258/371 (69.54%), Query Frame = 1 

Query: 1   MLKTEDDYFGGAAATATATTAVICEACERSPAVFICKADAASLCAACDAEIHSANPLARR 60
           MLKTED+Y  G         A ICEACER PA FICKADAASLCAACDAEIHSANPLARR
Sbjct: 1   MLKTEDEYREGGG---NGWAAGICEACERCPAEFICKADAASLCAACDAEIHSANPLARR 60

Query: 61  HHRVPIGGADMVGTTPECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLL 120
           H RVPI      G      E+EDE+EAASWLL+NP K NN+N+      +N+N NG+FLL
Sbjct: 61  HQRVPISSG---GAMFRSVEEEDEEEAASWLLMNPGKNNNDNK-----NNNSNNNGMFLL 120

Query: 121 GGE-------DDYLNFVEFNGCGE--DQFEGSENYGGGGGGGGEDRVVPI-EFEGK---- 180
           GGE       DDYL FVEFNG  E  D+FE  +N   GGGG   D VVPI +FEG     
Sbjct: 121 GGEDEDEEEDDDYLKFVEFNGNNEEDDEFERLKNNNYGGGG---DSVVPIDQFEGNKDHH 180

Query: 181 ------------------DPMLEQSYGG-VDG----------SYSYNGFLTHAVTSLPTS 240
                             + +LEQSYGG VD           SYSYNGFLTHA++     
Sbjct: 181 HHLHHHLHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSYSYNGFLTHAIS----- 240

Query: 241 LLPSSMEVGVVPDS-ATTMSDISVFSNIRPPKGTIDLFSG--AADVA-AVQMPATQLCPM 300
              SSMEVGVVP+S  TTMSDIS+ SN+RPPKGTIDLFSG  AA+VA  +QMPA QL PM
Sbjct: 241 --VSSMEVGVVPESTTTTMSDISI-SNVRPPKGTIDLFSGTTAAEVAVGIQMPAAQLSPM 300

Query: 301 DREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVKLDRKFSSPLM 325
           DREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV+LDRK+S+PL+
Sbjct: 301 DREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLL 349

[Close]
BLAST of CmoCh01G004710.1 vs. NCBI nr
Match: gi|449438975|ref|XP_004137263.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 1.3e-96
Identity = 231/366 (63.11%), Postives = 255/366 (69.67%), Query Frame = 1 

Query: 1   MLKTEDDYFGGAAATATATTAVICEACERSPAVFICKADAASLCAACDAEIHSANPLARR 60
           MLKTED+Y G          AVICEACER PA FICKADAASLCAACDAEIHSANPLARR
Sbjct: 1   MLKTEDEYRGSGG---NGWGAVICEACERCPAEFICKADAASLCAACDAEIHSANPLARR 60

Query: 61  HHRVPIGGADMVGTTPECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLL 120
           H RVPI      G      E+EDE+EAASWLL+NP K NN+N+      +NNN NG+FLL
Sbjct: 61  HQRVPISRG---GAMFRSVEEEDEEEAASWLLMNPGK-NNDNKN----NNNNNNNGMFLL 120

Query: 121 GGE----DDYLNFVEFNGCGE---DQFEGSENYGGGGGGGGEDRVVPI-EFEGK------ 180
            GE    D+YL FVEFNG  E   D+FE  +N   GGGG   D VVPI +FEG       
Sbjct: 121 SGEDEEDDEYLKFVEFNGNNEEDDDEFETLKNNNYGGGG---DSVVPIDQFEGNKNHDHH 180

Query: 181 -------------DPMLEQSYGG-VDG----------SYSYNGFLTHAVTSLPTSLLPSS 240
                        + +LEQSYGG VD           S+SYNGFLTHA++        SS
Sbjct: 181 LHHHHHEQQQQNHEILLEQSYGGLVDASEFFHTSSKPSFSYNGFLTHAIS-------VSS 240

Query: 241 MEVGVVPDS-ATTMSDISVFSNIRPPKGTIDLFSG---AADVAAVQMPATQLCPMDREAR 300
           MEVGVVP+S AT MSDIS+ SN+RPPKGTIDLFSG   A   AA QMPA QL PMDREAR
Sbjct: 241 MEVGVVPESTATIMSDISI-SNMRPPKGTIDLFSGMIAAEPAAASQMPAAQLSPMDREAR 300

Query: 301 VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGY 325
           VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV+LDRK+S+PLM + GY
Sbjct: 301 VLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVQLDRKYSNPLMPDAGY 344

[Close]
BLAST of CmoCh01G004710.1 vs. NCBI nr
Match: gi|1009174704|ref|XP_015868481.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Ziziphus jujuba])

HSP 1 Score: 306.6 bits (784), Expect = 5.1e-80
Identity = 191/355 (53.80%), Postives = 229/355 (64.51%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI---------------- 82
           +CEACER+PA F+CKADAASLC ACDA+IHSANPLARRHHRVPI                
Sbjct: 60  VCEACERAPAAFLCKADAASLCTACDADIHSANPLARRHHRVPILPISGCLYGPPATNPS 119

Query: 83  --------GGADMVGTT-PECQEDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGL 142
                   GG    G    E  ++EDEDEAASWLLLNP+K +N     G+  +NN+ NG 
Sbjct: 120 GSLTATAAGGDTADGFLGDETIDEEDEDEAASWLLLNPVKNSN-----GNNNNNNHGNGF 179

Query: 143 FLLGGEDDYLNFVEFNGCGEDQFEG--------------------SENYGGGGGGGGEDR 202
              G  D+YL+F E+N CG++QF                       +NYGGG      D 
Sbjct: 180 LFGGDADEYLDFAEYNSCGDNQFADPYNQQQQQKQQHQQHYVVPQQKNYGGG------DS 239

Query: 203 VVPIEF-EGKDPMLEQ-------SYGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVP 262
           +VP+++ EGK   L+Q        Y     ++SYNG  +++V+        SSM+VGVVP
Sbjct: 240 IVPVQYGEGKTHQLQQQGYQLGLEYESSKAAHSYNGSTSYSVS-------VSSMDVGVVP 299

Query: 263 DSATTMSDISVFSNIRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTR 322
           DS  TMSDIS+ S+ RPPKGTIDLFSG      +QMP +QL PMDREARVLRYREKKKTR
Sbjct: 300 DS--TMSDISI-SHPRPPKGTIDLFSG----PPIQMP-SQLTPMDREARVLRYREKKKTR 359

Query: 323 KFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           KFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV++++ FS+ LMA  GYGIVPSF
Sbjct: 360 KFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVEQMFSTALMAETGYGIVPSF 388

[Close]
BLAST of CmoCh01G004710.1 vs. NCBI nr
Match: gi|298204419|emb|CBI16899.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 306.2 bits (783), Expect = 6.7e-80
Identity = 190/324 (58.64%), Postives = 220/324 (67.90%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVP---IGGADMVGTTPECQ 82
           +CE+CER+PA F+CKADAASLCA CDA+IHSANPLARRHHRVP   I G        +  
Sbjct: 135 VCESCERAPAAFVCKADAASLCATCDADIHSANPLARRHHRVPVLPIAGCLYGPPATDPG 194

Query: 83  EDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNGLFLLGGEDDYLNFVEFNGCGEDQ 142
             EDEDEAASWLLLNP+K NN +       SNN  NGL   G  D+YL+ VE+N C E+Q
Sbjct: 195 GTEDEDEAASWLLLNPVKNNNGS-------SNNQNNGLLFGGEVDEYLDLVEYNSCPENQ 254

Query: 143 FEGSEN-------YGGGGGGGGEDRVVPIEF-EGKDPMLEQ----------SYGGVDGSY 202
           F    N       Y       G DRVVP++  E K  + +Q           Y     +Y
Sbjct: 255 FSDQYNQQQPPPHYSVPHKNYGGDRVVPVQCGEAKGQLHQQHQQQGFHLGMEYESSKAAY 314

Query: 203 SYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDISV-FSNIRPPKGTIDLFSGAADV 262
           SYN  ++H+V+        SSM+VGVVP+ ATTMSDIS+  S+ RPPKGTIDLFSG    
Sbjct: 315 SYNPSISHSVSV-------SSMDVGVVPE-ATTMSDISISISHPRPPKGTIDLFSGPP-- 374

Query: 263 AAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV 322
             +QMP TQL PMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV
Sbjct: 375 --IQMP-TQLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDV 434

Query: 323 EVKLDRKFSSPLMANVGYGIVPSF 325
           EV++D+ FS+ LMA  GYGIVPSF
Sbjct: 435 EVEVDQMFSTTLMAESGYGIVPSF 438

[Close]
BLAST of CmoCh01G004710.1 vs. NCBI nr
Match: gi|225451881|ref|XP_002282509.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Vitis vinifera])

HSP 1 Score: 303.5 bits (776), Expect = 4.4e-79
Identity = 193/347 (55.62%), Postives = 226/347 (65.13%), Query Frame = 1 

Query: 23  ICEACERSPAVFICKADAASLCAACDAEIHSANPLARRHHRVPI--------------GG 82
           +CE+CER+PA F+CKADAASLCA CDA+IHSANPLARRHHRVP+               G
Sbjct: 65  VCESCERAPAAFVCKADAASLCATCDADIHSANPLARRHHRVPVLPIAGCLYGPPATDPG 124

Query: 83  ADMVGTTPECQ------------EDEDEDEAASWLLLNPLKTNNENRGGGSIQSNNNTNG 142
             +V +  E              ++EDEDEAASWLLLNP+K NN     GS  SNN  NG
Sbjct: 125 GTVVRSAAEADNGFLGQEAEETIDEEDEDEAASWLLLNPVKNNN-----GS--SNNQNNG 184

Query: 143 LFLLGGEDDYLNFVEFNGCGEDQFEGSEN-------YGGGGGGGGEDRVVPIEF-EGKDP 202
           L   G  D+YL+ VE+N C E+QF    N       Y       G DRVVP++  E K  
Sbjct: 185 LLFGGEVDEYLDLVEYNSCPENQFSDQYNQQQPPPHYSVPHKNYGGDRVVPVQCGEAKGQ 244

Query: 203 MLEQ----------SYGGVDGSYSYNGFLTHAVTSLPTSLLPSSMEVGVVPDSATTMSDI 262
           + +Q           Y     +YSYN  ++H+V+        SSM+VGVVP+ ATTMSDI
Sbjct: 245 LHQQHQQQGFHLGMEYESSKAAYSYNPSISHSVS-------VSSMDVGVVPE-ATTMSDI 304

Query: 263 SV-FSNIRPPKGTIDLFSGAADVAAVQMPATQLCPMDREARVLRYREKKKTRKFEKTIRY 322
           S+  S+ RPPKGTIDLFSG      +QMP TQL PMDREARVLRYREKKKTRKFEKTIRY
Sbjct: 305 SISISHPRPPKGTIDLFSG----PPIQMP-TQLTPMDREARVLRYREKKKTRKFEKTIRY 364

Query: 323 ASRKAYAETRPRIKGRFAKRTDVEVKLDRKFSSPLMANVGYGIVPSF 325
           ASRKAYAETRPRIKGRFAKRTDVEV++D+ FS+ LMA  GYGIVPSF
Sbjct: 365 ASRKAYAETRPRIKGRFAKRTDVEVEVDQMFSTTLMAESGYGIVPSF 391

The following BLAST results are available for this feature:
BLAST of CmoCh01G004710.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COL2_ARATH8.5e-5949.38Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1[more]
COL1_ARATH6.3e-5445.07Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1[more]
CONS_ARATH8.3e-5444.28Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1[more]
HD1_ORYSJ9.8e-4741.03Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2 SV=1[more]
COL4_ARATH3.4e-3939.77Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2[more]
BLAST of CmoCh01G004710.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY36_CUCSA9.4e-9763.11Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1[more]
F6GVT3_VITVI3.0e-7955.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00640 PE=4 SV=... [more]
W9S2Z3_9ROSA5.7e-7857.31Zinc finger protein CONSTANS-LIKE 2 OS=Morus notabilis GN=L484_009669 PE=4 SV=1[more]
B6VEH4_FRAAN6.3e-7755.43CONSTANS OS=Fragaria ananassa PE=2 SV=1[more]
I3QIJ8_FRAAN5.4e-7654.12CONSTANTS-like protein OS=Fragaria ananassa GN=CO-2 PE=2 SV=1[more]
BLAST of CmoCh01G004710.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02380.14.8e-6049.38 CONSTANS-like 2[more]
AT5G15850.13.6e-5545.07 CONSTANS-like 1[more]
AT5G15840.14.7e-5544.28 B-box type zinc finger protein with CCT domain[more]
AT5G24930.11.9e-4039.77 CONSTANS-like 4[more]
AT5G57660.14.8e-3637.27 CONSTANS-like 5[more]
BLAST of CmoCh01G004710.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111102|ref|XP_008455579.1|3.2e-9862.53PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo][more]
gi|449438975|ref|XP_004137263.1|1.3e-9663.11PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus][more]
gi|1009174704|ref|XP_015868481.1|5.1e-8053.80PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Ziziphus jujuba][more]
gi|298204419|emb|CBI16899.3|6.7e-8058.64unnamed protein product [Vitis vinifera][more]
gi|225451881|ref|XP_002282509.1|4.4e-7955.62PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR010402CCT_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh01G004710CmoCh01G004710gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh01G004710.1CmoCh01G004710.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G004710.1.CDS.1CmoCh01G004710.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh01G004710.1.exon.1CmoCh01G004710.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 22..66
score: 1.
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 19..66
score: 4.4
IPR000315B-box-type zinc fingerPROFILEPS50119ZF_BBOXcoord: 19..66
score: 11
IPR010402CCT domainPFAMPF06203CCTcoord: 255..297
score: 5.9
IPR010402CCT domainPROFILEPS51017CCTcoord: 255..297
score: 16
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 22..324
score: 3.6E
NoneNo IPR availablePANTHERPTHR31319:SF10ZINC FINGER PROTEIN CONSTANS-RELATEDcoord: 22..324
score: 3.6E