CmoCh01G003770.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCAAACTGATAGCATTTGGGCAAAGTTTCCGCTGAAGTCTCCACCTGACAAGTTCTATGGCTTCTACAGGAACCATGTAGGGGATTTGATCGATCTGTTCCCTCAGTATTTCAGCAGCATTCAGTTTGTGGAAGGCGAAAAGTACTCTCCCGACAGCGTTATACAGTTCAATTACCGCTTCGGTAAGAAACTATCTACGTTACTATTTTAGTCTCGAAACTTTTAAAAATATAACGGGTTCGCTTCTTTGAATATGAACGAACGAACGAACGAACAGGCAGTCAATTATTATCGGCAAATATAAAGATCAGAGCTGTGGATGATGTGAAGAAATCGTTGGTTTATAAAGTTATTGAAGGAGATATTCTAAAGCATTACAAAGTGTTTGAATTAAGAATTGAAGCTGTTAATGGAGGGATAAGCAAAGGAGGAGGTGGGAGCTTTGCAAAATGGACCATTGTGTTTGAAAAGGCAAATGAAAATGTGGCAGCACCACAAGACTACCTGGAATGGTTTGTCGAGGTTTCCAAAGGCGTTGATGCTTACTTATCCAAGAACAAGAACTAAAACTCTAAAACAATCAAGTGAGCTAAGCTCTTGGCTGTGTATCAACTTGGTTTGTTCTTAAATAAGAAATTATGCATGAACTATTAAAACATCGTATCTTTACGACGCTGTTGATTGTATCGAGATAAACTTCAAAGAATATCACAATATTGTACCACATATCCCATCTTGATATGTAAACAGAG ATGAGCCAAACTGATAGCATTTGGGCAAAGTTTCCGCTGAAGTCTCCACCTGACAAGTTCTATGGCTTCTACAGGAACCATGTAGGGGATTTGATCGATCTGTTCCCTCAGTATTTCAGCAGCATTCAGTTTGTGGAAGGCGAAAAGTACTCTCCCGACAGCGTTATACAGTTCAATTACCGCTTCGGCAGTCAATTATTATCGGCAAATATAAAGATCAGAGCTGTGGATGATGTGAAGAAATCGTTGGTTTATAAAGTTATTGAAGGAGATATTCTAAAGCATTACAAAGTGTTTGAATTAAGAATTGAAGCTGTTAATGGAGGGATAAGCAAAGGAGGAGGTGGGAGCTTTGCAAAATGGACCATTGTGTTTGAAAAGGCAAATGAAAATGTGGCAGCACCACAAGACTACCTGGAATGGTTTGTCGAGGTTTCCAAAGGCGTTGATGCTTACTTATCCAAGAACAAGAACTAAAACTCTAAAACAATCAAGTGAGCTAAGCTCTTGGCTGTGTATCAACTTGGTTTGTTCTTAAATAAGAAATTATGCATGAACTATTAAAACATCGTATCTTTACGACGCTGTTGATTGTATCGAGATAAACTTCAAAGAATATCACAATATTGTACCACATATCCCATCTTGATATGTAAACAGAG ATGAGCCAAACTGATAGCATTTGGGCAAAGTTTCCGCTGAAGTCTCCACCTGACAAGTTCTATGGCTTCTACAGGAACCATGTAGGGGATTTGATCGATCTGTTCCCTCAGTATTTCAGCAGCATTCAGTTTGTGGAAGGCGAAAAGTACTCTCCCGACAGCGTTATACAGTTCAATTACCGCTTCGGCAGTCAATTATTATCGGCAAATATAAAGATCAGAGCTGTGGATGATGTGAAGAAATCGTTGGTTTATAAAGTTATTGAAGGAGATATTCTAAAGCATTACAAAGTGTTTGAATTAAGAATTGAAGCTGTTAATGGAGGGATAAGCAAAGGAGGAGGTGGGAGCTTTGCAAAATGGACCATTGTGTTTGAAAAGGCAAATGAAAATGTGGCAGCACCACAAGACTACCTGGAATGGTTTGTCGAGGTTTCCAAAGGCGTTGATGCTTACTTATCCAAGAACAAGAACTAA
BLAST of CmoCh01G003770.1 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.3e-16 Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.4e-14 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.5e-13 Identity = 41/141 (29.08%), Postives = 69/141 (48.94%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. Swiss-Prot
Match: ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana GN=MLP423 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.9e-12 Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TrEMBL
Match: A0A0A0LCN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G340350 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 5.9e-52 Identity = 97/158 (61.39%), Postives = 126/158 (79.75%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TrEMBL
Match: A0A0A0LA34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.8e-51 Identity = 96/156 (61.54%), Postives = 127/156 (81.41%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TrEMBL
Match: N0DKL1_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 4.2e-50 Identity = 93/156 (59.62%), Postives = 120/156 (76.92%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TrEMBL
Match: N0DK19_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.6e-49 Identity = 92/156 (58.97%), Postives = 119/156 (76.28%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TrEMBL
Match: N0DK07_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR3 PE=2 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45 Identity = 90/156 (57.69%), Postives = 116/156 (74.36%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34) HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17 Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TAIR10
Match: AT5G28000.1 (AT5G28000.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 84.7 bits (208), Expect = 5.5e-17 Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 84.7 bits (208), Expect = 5.5e-17 Identity = 46/141 (32.62%), Postives = 74/141 (52.48%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TAIR10
Match: AT1G70880.1 (AT1G70880.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15 Identity = 47/141 (33.33%), Postives = 69/141 (48.94%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31) HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. NCBI nr
Match: gi|778688602|ref|XP_011652791.1| (PREDICTED: uncharacterized protein LOC105435098 [Cucumis sativus]) HSP 1 Score: 211.8 bits (538), Expect = 8.4e-52 Identity = 97/158 (61.39%), Postives = 126/158 (79.75%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. NCBI nr
Match: gi|449464144|ref|XP_004149789.1| (PREDICTED: MLP-like protein 34 [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 5.5e-51 Identity = 96/156 (61.54%), Postives = 127/156 (81.41%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. NCBI nr
Match: gi|659114461|ref|XP_008457062.1| (PREDICTED: MLP-like protein 423 [Cucumis melo]) HSP 1 Score: 205.7 bits (522), Expect = 6.0e-50 Identity = 94/156 (60.26%), Postives = 128/156 (82.05%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. NCBI nr
Match: gi|477504342|dbj|BAN14688.1| (major latex-like protein [Cucurbita pepo subsp. ovifera]) HSP 1 Score: 205.7 bits (522), Expect = 6.0e-50 Identity = 93/156 (59.62%), Postives = 120/156 (76.92%), Query Frame = 1
BLAST of CmoCh01G003770.1 vs. NCBI nr
Match: gi|477504344|dbj|BAN14689.1| (major latex-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49 Identity = 92/156 (58.97%), Postives = 119/156 (76.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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