CmaCh20G007830.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G007830.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr20 : 3698263 .. 3698556 (-)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCGAAAGGCCATGTTGCAGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGTCACGCAGAGGAGAAGTTTGGATTCCATCATCCTCAAGGGGGACTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTTACTTCTAGACTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCGAAAGGCCATGTTGCAGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGTCACGCAGAGGAGAAGTTTGGATTCCATCATCCTCAAGGGGGACTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTTACTTCTAGACTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTTCTATCTTTGGTTCCTCATGCCAAGCAAATTCTGAAGATGCAGTCAGGTTTCACCAAAAACCAGTTGGATGTTCCGAAAGGCCATGTTGCAGTTTATGTGGGAGAGATCCAAAGGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACCATCCATCGTTCCAGCAACTGCTCAGTCACGCAGAGGAGAAGTTTGGATTCCATCATCCTCAAGGGGGACTAACAATTCCTTGCAAAGAAGATGCCTTCATCGATCTTACTTCTAGACTGCAAGTATCTTGA

Protein sequence

MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

Homology

[Close]

BLAST of CmaCh20G007830.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmaCh20G007830.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.0e-23
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 17 KMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EE+FGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmaCh20G007830.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E++FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of CmaCh20G007830.1 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EE+FGF HP GGLTIPC ED FI+
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of CmaCh20G007830.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFID 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF HP GGLTIPC ED FI+
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRL 95
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of CmaCh20G007830.1 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 4.3e-45
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmaCh20G007830.1 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 6.2e-44
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEE+FGFHHPQGGLTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmaCh20G007830.1 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+H+EE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmaCh20G007830.1 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42
Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CmaCh20G007830.1 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.8e-42
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG+  L LVPHAK+ILKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS AEE+FGFHHP GGLTIPCKEDAF+DLTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CmaCh20G007830.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFQ 60
          M IR   ++  +KQ+LK  S  + N + +PKGH+AVYVGE+ Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          +LL  AEE+FGF HP GGLTIPC E  FIDL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmaCh20G007830.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.5 bits (293), Expect = 4.7e-27
Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 1


Query: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEE+FGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmaCh20G007830.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.7 bits (291), Expect = 8.0e-27
Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR   ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSR 94
          SFQ LL  AEE+FGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmaCh20G007830.1 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 5.7e-25
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSHAEEKFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EE+FGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmaCh20G007830.1 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 5.7e-25
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 1


Query: 7   SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLN 66
           S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLN
Sbjct: 6   SMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLN 65

Query: 67  HPSFQQLLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQV 97
           HP F++ L+ AEE+ GFHH  GGLTIPC+E++F+ L +  Q+
Sbjct: 66  HPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of CmaCh20G007830.1 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 191.0 bits (484), Expect = 9.4e-46
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CmaCh20G007830.1 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 6.1e-45
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmaCh20G007830.1 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 8.8e-44
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEE+FGFHHPQGGLTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmaCh20G007830.1 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+ AEE+FGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmaCh20G007830.1 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+H+EE+FGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:

BLAST of CmaCh20G007830.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	1.0e-23	63.10	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	5.0e-23	64.56	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	1.1e-22	71.21	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU21_ARATH	1.9e-22	71.21	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU23_ARATH	2.5e-22	72.31	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of CmaCh20G007830.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	4.3e-45	91.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	6.2e-44	88.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	1.4e-43	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	3.4e-42	88.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	5.8e-42	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]

BLAST of CmaCh20G007830.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	3.6e-27	58.16	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	4.7e-27	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	8.0e-27	58.76	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.7e-25	63.10	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	5.7e-25	54.90	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh20G007830.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115596\|ref\|XP_008457635.1\|	9.4e-46	92.78	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	6.1e-45	91.75	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	8.8e-44	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	1.2e-43	89.69	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206761\|gb\|KGN61880.1\|	2.0e-43	87.63	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh20G007830	CmaCh20G007830	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007830.1	CmaCh20G007830.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007830.1.CDS.1	CmaCh20G007830.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G007830.1.exon.1	CmaCh20G007830.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 2.6
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.9
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.9