CmaCh20G006600.1 (mRNA) Cucurbita maxima (Rimu)

NameCmaCh20G006600.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr20 : 3042297 .. 3044376 (+)
Sequence length372
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTGAATCCATCATCCAACAACCCTGCAATTATTGGATTGAAGGATGAAGTATTGGGGGGCACATCCATAGCTTCAAACAACCGGAGAGCATCAGGTAACATGTTTGAGTGCGTGTATAGTGATAACATGGTATTCCAGGCGACGACAGTTCTTTGAGGAATTTCATCGAACAGCTTCCGTGCGAGTGGAACGGACATGGATTTGCCATACATGTCAACTAGGGCACAGGCAACAAATGGGTTTGAGAGGAGGGAGGATTTAGTAGCGTGGGCATGGATGGCAGTACCCAAAAGGGGTCGGCGGATGGCGGTGCAGGACTTGAGAACGAGAGAGAAAACGTGGGCGTCTAGAGCAAGGGCTAGTGAGGCCTGCATGTGGAGGAAAAGAGCAAGAGCCTGCTCGTGGTTGCCATGGTTGGCATAAAAGCTCAATTGCTTAGTGTAGGAAAGCAAGCGTAGATAGTTAGAACCCATCTTCTTTAACCCCGCAAACACGAAAAGTTCCCTGCTTTCATAGGAAACGAAATCACAGAGCTCTGAAGATCTGAAATTTTGTTAATTTCCTCCGTAGAACAATTCGTTATGGTCATCCTCACCACCTTTAAACAAACTCAAATTTGTTCCAAAAGATTAAAAAATCAAATCTTTAATTTTTCCTTTTTCTCAATTTTCTGAAAAAGACATCCATATTCTATCGATGACTCTCCACATCTGTCATTATCTACGCATAAACTTTCATAACTTTGTTTTGTACTTATTCATAATCATTCTTTAAATTAACATAGGATAAATTGATCCGTTATGATCAGTGTCTTTATTTATATAAAACTGAACGAAAGTGTCTTTGTTTATATAAAACTACTGAACGAAAGTGTTTTTGTTTATATAAAACTGAACATTGACTATCAATTTCATTTATTGTTATACAAAAAAAAATCATTTTTTTTTTTTTTTTGGAGATAGAGTTTAATCCGAGTAATTTTTACTTGTTTATTATTTTTTTTTTTTTAAAAAAAGTAAATTTATTTTAAACTTTTCATTTTTCTAACTTAATTTTTATTACAAATGATAAAAAAAAAAATCTTAATATAGGATATATTTGATAAAAAAAAAACATATGTATAATATTTTACCAACCTAATTTCTAAAAATTCGAATTACTTTCAAAATTAATCAATTATTTATTTTTAATATAAATAAAAATATATGTATATTAAAAATATATTTATATTAAGCGAGACTGGAATTGAGCAGAGACAGAGATATGGATAGAGAATATAATCTTGTTCTTGACTCTCTTTATTATTAAGAATAAAATATTATCCACTCCCTTCCCATTCTCTATCTAAACGATCAATTTCATCTCTATTCGAAGTAGGTCCCATAAGACTCGAATCCAACGTATAAAATGGACATGTCTAATTCCATCATGTTCGTCACTCATAGCCGGCTCTATTTTTCAAAATAATCATTAAACTAAAAAAAACTTGTCTTTTTGTTTAATATACACATTCCCCTTTCGGTTCACAACGTTACATTAAAGAAAAAAAACACAATATTTATTTATGAATATTCAAATTCGAAATCCTTCTTTTTAAAAATATTAAAAAATCGGACATTTTCGGTTGTTTTTTTTTATTTGTTTGTTTGATTGATTGATTTTTTTCCTCTGCTTTTGGTTACACGACGAAATTTGAAAACCCACCTCACAGGCTGAGCTCTATCTATTGCCTCTGTTTCCATTGAAAATTCCGGCTTTCTTGTGCCCTTACAACGGCTCAACCCTCCTCCATTTTCGTCGTCCTTTCCAAAATCCTTCTTTAATTCAATTTTTCTGCCATTCAATCGCTACCCTTTATCGCCTCTGGTATGATCTTATATACAATCTCTCGTTTCTGGTTCCTGGTTTCGTTTTTTGCATAAACCTTTTCCTTTTTGTCTGCGTCTGTAATTTTCTTTTGGGAAGAATCGATTTCTTCCCATTTTTTTCTTTTTTTTTTCTTTTAATATAAGAATTAAGAGCCGACCCCGGAAGGCAAGAAATTGTTGTTAATTTCTAGTTGGTTTTTTAAGGA

mRNA sequence

ATGGCCTTGAATCCATCATCCAACAACCCTGCAATTATTGGATTGAAGGATGAAGTATTGGGGGGCACATCCATAGCTTCAAACAACCGGAGAGCATCAGGTAACATGTTTGAGTGCGTGTATAGTGATAACATGGCTGAGCTCTATCTATTGCCTCTGTTTCCATTGAAAATTCCGGCTTTCTTGTGCCCTTACAACGGCTCAACCCTCCTCCATTTTCGTCGTCCTTTCCAAAATCCTTCTTTAATTCAATTTTTCTGCCATTCAATCGCTACCCTTTATCGCCTCTGGTATGATCTTATATACAATCTCTCGTTTCTGGTTCCTGGTTTCGTTTTTTGCATAAACCTTTTCCTTTTTGTCTGCGTCTGA

Coding sequence (CDS)

ATGGCCTTGAATCCATCATCCAACAACCCTGCAATTATTGGATTGAAGGATGAAGTATTGGGGGGCACATCCATAGCTTCAAACAACCGGAGAGCATCAGGTAACATGTTTGAGTGCGTGTATAGTGATAACATGGCTGAGCTCTATCTATTGCCTCTGTTTCCATTGAAAATTCCGGCTTTCTTGTGCCCTTACAACGGCTCAACCCTCCTCCATTTTCGTCGTCCTTTCCAAAATCCTTCTTTAATTCAATTTTTCTGCCATTCAATCGCTACCCTTTATCGCCTCTGGTATGATCTTATATACAATCTCTCGTTTCTGGTTCCTGGTTTCGTTTTTTGCATAAACCTTTTCCTTTTTGTCTGCGTCTGA

Protein sequence

MALNPSSNNPAIIGLKDEVLGGTSIASNNRRASGNMFECVYSDNMAELYLLPLFPLKIPAFLCPYNGSTLLHFRRPFQNPSLIQFFCHSIATLYRLWYDLIYNLSFLVPGFVFCINLFLFVCV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh20G006600CmaCh20G006600gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh20G006600.1CmaCh20G006600.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh20G006600.1.exon.3CmaCh20G006600.1.exon.3exon
CmaCh20G006600.1.exon.2CmaCh20G006600.1.exon.2exon
CmaCh20G006600.1.exon.1CmaCh20G006600.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh20G006600.1.CDS.1CmaCh20G006600.1.CDS.1CDS
CmaCh20G006600.1.CDS.2CmaCh20G006600.1.CDS.2CDS
CmaCh20G006600.1.CDS.3CmaCh20G006600.1.CDS.3CDS