CmaCh20G006070.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G006070.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	B-cell receptor-associated-like protein
Location	Cma_Chr20 : 2836722 .. 2838677 (-)
Sequence length	1009

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGAACAAGGTTATTACACCGAACGCCACTAACAAAGGGTTGGAAGAAGCGCTCTGTTGCAGACGGAATCTTATAGAGGATGATTCAGCTTCTGTTCACGGTAATCGCAGCCGAAATGGCTCTGATTTTGACTCTACTCTTCAGGACGCCTCTGAGGAAGCTTGTGATCTTGAGTTTGGATCGTGTTAAGCGTGGAAAAGGCCCAATCGTCGTTCAAACAATCGCCGGAACTGTCTTCGTTGTGCTTATTTCCAGCGTCTATAGCATGGTTAAGATCCAGAATCGGATGATTGAGGCTGGTGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAATCACTTGCTTGAAGCTTCTCTCATGGGTAATTTTTAAATTAATCCTTTCTCCACTTCCGTTTTCCTTCATCTTTGCTCTCTGGATAGGGCTCTCTCAATTTTAGGGTGAAATGTGTTGGTTATGCTTAATTTATGATTTCGAGCGTTGATTGATTTCGTAATTATTGGATTTACAAGCATCTGTAGAATGATTGGCTTTAGTCACTGGGCTAGTTAGAACCGACAGAACTGGATTCATTTCTTTCAAATTAACTCCAGAATTCGACGAAAGGGCGGGAGATCTTGTTCGATTCAATGATTGTGATGTGACATTAAACATTTTCCTAAAATTGAGCTGCTGTTCACTCCACTTCGTTTGGGCTTTTTCTTCTGTCAGGAACAATGTATTAAATCTAAAATCTGGCTCGCATGCTTCTAGATTGCTTAAAATTTTACATGTAAACGGAGTTTACTGATAAGTTCTTATAAATGCGAATGGATTTGGTGCTTTACTCATGGGGATGGAATCCTGTTTGTGCATCATATCATGTATTAACAGAGTAATTTGAAGGAAAATCAGTAGGAGCGTTTGAAAACAATATCATTCTTAATAGTTGATGTCAACAGATGTGATGTGGCCTTCGATTTCGAAGCGGAACGCCCTATTTGACCTTTCTTATTAACCCATTTGAATTCTAAACCAAAGTTCAAAAACAGCATCAGGTTTTGAAGAACTTAGTTTTTGAAAACATTTTTAAAAAGTAGATAATAGAGCATGAAAACAATAGGTGAAAGTAAAGTTTATAAGAATGATTATCAAATGTTGCCTAAGTTCGTTGTTCTTATCAGATTTTCTTTGTTTGATAATCTATATCTTATTGTTGTTCTACGAGAGATTTTGTTTTGTTTTTCCATTTGCTTGCAGTTTTGCAGTTCATTCCCGTTAGTTTGAGTACTTCATGTTAGATTTGAATATAACATGTATGTTCTGCAGGGTTTTTGTTGTTCCTTGCCCTGATGATTGATAGACTACATCACTACATCCGAGAGCTTCGACTGCTCCGAAAGACCATGGAGGTCGCAAAGAAGCAAATTCGAGCATCAGAGGATGCAAGCGTGGAGAAGCTTAAATCCCTGGGAGAAGAGGCAACTACCTTGAGGAGTAAAATAACCAAACTGGAAGCTGAAGTTGAGGCAAAAACAAAAGAAGCAAATGCTGCAGAAGCAGAAACAGAAGCCTTAAGAAAGCAATCTGAGGAGTACCTGCTAGAGTACGATCGGTTGTTGGAGGACAATCAGAATATTCGGAATCAGTTGGAGTCGATCGAACATGGCTCTTCATAATCTTGTAATGCATTTAGAGGCTGTCGTTCAATCCTTTTCGCATCGTGTCGTTGGAGGCTTAAGAAAATCATGTGTTTATGCTTCGCTCTTAATCGAAGTGCCTCTGGTTAGCTGGGTCTGTCTGTATCAGTGAAATGAAATTTAAGGTGGGATATTAAAAGTGGGAGCTTGCTTAATCCATTTAAGACTACTTTCCATGGCTGGTTGTTTGTTTGTTTGTCTTTTGAATGTAATTACATTGTATATGACAATGTGATCCAATGCCAATTGATTTTGCTAAAGGCTATTCATTCAA

mRNA sequence

GTTTGAACAAGGTTATTACACCGAACGCCACTAACAAAGGGTTGGAAGAAGCGCTCTGTTGCAGACGGAATCTTATAGAGGATGATTCAGCTTCTGTTCACGGTAATCGCAGCCGAAATGGCTCTGATTTTGACTCTACTCTTCAGGACGCCTCTGAGGAAGCTTGTGATCTTGAGTTTGGATCGTGTTAAGCGTGGAAAAGGCCCAATCGTCGTTCAAACAATCGCCGGAACTGTCTTCGTTGTGCTTATTTCCAGCGTCTATAGCATGGTTAAGATCCAGAATCGGATGATTGAGGCTGGTGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAATCACTTGCTTGAAGCTTCTCTCATGGGGTTTTTGTTGTTCCTTGCCCTGATGATTGATAGACTACATCACTACATCCGAGAGCTTCGACTGCTCCGAAAGACCATGGAGGTCGCAAAGAAGCAAATTCGAGCATCAGAGGATGCAAGCGTGGAGAAGCTTAAATCCCTGGGAGAAGAGGCAACTACCTTGAGGAGTAAAATAACCAAACTGGAAGCTGAAGTTGAGGCAAAAACAAAAGAAGCAAATGCTGCAGAAGCAGAAACAGAAGCCTTAAGAAAGCAATCTGAGGAGTACCTGCTAGAGTACGATCGGTTGTTGGAGGACAATCAGAATATTCGGAATCAGTTGGAGTCGATCGAACATGGCTCTTCATAATCTTGTAATGCATTTAGAGGCTGTCGTTCAATCCTTTTCGCATCGTGTCGTTGGAGGCTTAAGAAAATCATGTGTTTATGCTTCGCTCTTAATCGAAGTGCCTCTGGTTAGCTGGGTCTGTCTGTATCAGTGAAATGAAATTTAAGGTGGGATATTAAAAGTGGGAGCTTGCTTAATCCATTTAAGACTACTTTCCATGGCTGGTTGTTTGTTTGTTTGTCTTTTGAATGTAATTACATTGTATATGACAATGTGATCCAATGCCAATTGATTTTGCTAAAGGCTATTCATTCAA

Coding sequence (CDS)

ATGATTCAGCTTCTGTTCACGGTAATCGCAGCCGAAATGGCTCTGATTTTGACTCTACTCTTCAGGACGCCTCTGAGGAAGCTTGTGATCTTGAGTTTGGATCGTGTTAAGCGTGGAAAAGGCCCAATCGTCGTTCAAACAATCGCCGGAACTGTCTTCGTTGTGCTTATTTCCAGCGTCTATAGCATGGTTAAGATCCAGAATCGGATGATTGAGGCTGGTGAGGTTAATCCCACGGATCAGGTCCTTATGTCCAATCACTTGCTTGAAGCTTCTCTCATGGGGTTTTTGTTGTTCCTTGCCCTGATGATTGATAGACTACATCACTACATCCGAGAGCTTCGACTGCTCCGAAAGACCATGGAGGTCGCAAAGAAGCAAATTCGAGCATCAGAGGATGCAAGCGTGGAGAAGCTTAAATCCCTGGGAGAAGAGGCAACTACCTTGAGGAGTAAAATAACCAAACTGGAAGCTGAAGTTGAGGCAAAAACAAAAGAAGCAAATGCTGCAGAAGCAGAAACAGAAGCCTTAAGAAAGCAATCTGAGGAGTACCTGCTAGAGTACGATCGGTTGTTGGAGGACAATCAGAATATTCGGAATCAGTTGGAGTCGATCGAACATGGCTCTTCATAA

Protein sequence

MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSVYSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKTMEVAKKQIRASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQSEEYLLEYDRLLEDNQNIRNQLESIEHGSS

Homology

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BLAST of CmaCh20G006070.1 vs. TrEMBL
Match: A0A0A0LMU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416790 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 8.5e-91
Identity = 191/210 (90.95%), Postives = 203/210 (96.67%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLLFTVIA +MALILTLLFRTPLRKLVI +LDR+KRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIATQMALILTLLFRTPLRKLVIFTLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KI NRM+EAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMLKIHNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180
           MEVAKKQIRASEDAS EKLK+LGEEATT+R+KITKLE+EVE KTKEAN AEAET+ALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKALGEEATTMRNKITKLESEVEVKTKEANDAEAETDALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHASS 210

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BLAST of CmaCh20G006070.1 vs. TrEMBL
Match: A0A067EUY0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027898mg PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-69
Identity = 149/213 (69.95%), Postives = 185/213 (86.85%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLL+TVI ++MALI+TLLF+TPLRKLVI+SLDRVKRG+GP+VV+T+ GT+F+VL+SSV
Sbjct: 1   MIQLLYTVIFSQMALIMTLLFKTPLRKLVIMSLDRVKRGRGPVVVKTVGGTLFIVLMSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YS++KIQ R +E G +NPTDQ+LMS H+LEASLMGFLLFL+LM+DRLHHYIRELRLLRK 
Sbjct: 61  YSILKIQQRTLETGALNPTDQILMSKHMLEASLMGFLLFLSLMMDRLHHYIRELRLLRKA 120

Query: 121 MEVAKKQIRASEDA---SVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME AKKQ R+ ED    +V++ K LG++  TL++KI KLE+E E K KEANAA+AE EAL
Sbjct: 121 MEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEANAAKAEAEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEHGSS 211
           +KQSE +LLEYDRLL DNQ++RNQLESI+H  S
Sbjct: 181 KKQSEGFLLEYDRLLADNQHLRNQLESIDHSDS 213

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BLAST of CmaCh20G006070.1 vs. TrEMBL
Match: V4W496_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016648mg PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-69
Identity = 149/213 (69.95%), Postives = 185/213 (86.85%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLL+TVI ++MALI+TLLF+TPLRKLVI+SLDRVKRG+GP+VV+T+ GT+F+VL+SSV
Sbjct: 1   MIQLLYTVIFSQMALIMTLLFKTPLRKLVIMSLDRVKRGRGPVVVKTVGGTLFIVLMSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YS++KIQ R +E G +NPTDQ+LMS H+LEASLMGFLLFL+LM+DRLHHYIRELRLLRK 
Sbjct: 61  YSILKIQQRTLETGALNPTDQILMSKHMLEASLMGFLLFLSLMMDRLHHYIRELRLLRKA 120

Query: 121 MEVAKKQIRASEDA---SVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME AKKQ R+ ED    +V++ K LG++  TL++KI KLE+E E K KEANAA+AE EAL
Sbjct: 121 MEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEANAAKAEAEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEHGSS 211
           +KQSE +LLEYDRLL DNQ++RNQLESI+H  S
Sbjct: 181 KKQSEGFLLEYDRLLADNQHLRNQLESIDHSDS 213

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BLAST of CmaCh20G006070.1 vs. TrEMBL
Match: F6HIC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g00810 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.1e-69
Identity = 153/211 (72.51%), Postives = 181/211 (85.78%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLLFTVI AEMALI+TLLF+TPLRKLV+++LDRVKRG+GPI+ QT+A TVFVVL+SSV
Sbjct: 1   MIQLLFTVIFAEMALIMTLLFKTPLRKLVVMALDRVKRGRGPIMAQTVATTVFVVLMSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KIQNR +E G +NPTDQVLM+ HLLEASLMGFLLFLALMIDRLHHYIRELRLLRK 
Sbjct: 61  YSMMKIQNRSVEPGLINPTDQVLMARHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKA 120

Query: 121 MEVAKKQIRASEDAS---VEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME  KKQ R  ED      E+ K++GEE ++LR++I KLE+E E K KEA AAEA T AL
Sbjct: 121 MEAEKKQNRGFEDGKNGRAEEAKAMGEEMSSLRTQIKKLESECETKAKEAEAAEANTVAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEHG 209
           +KQSE +LLEYDRLLE+NQN+++QLESI+ G
Sbjct: 181 KKQSEGFLLEYDRLLEENQNLKSQLESIDQG 211

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BLAST of CmaCh20G006070.1 vs. TrEMBL
Match: B9SFQ9_RICCO (Bcr-associated protein, bap, putative OS=Ricinus communis GN=RCOM_1224170 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.5e-66
Identity = 146/201 (72.64%), Postives = 171/201 (85.07%), Query Frame = 1


Query: 13  MALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSVYSMVKIQNRMIE 72
           M LI+TLLF+TPLRKLVI+SLDRVKRG+GP++V+T+ GTVFVVL+SSVYSMVKIQNR IE
Sbjct: 1   MGLIMTLLFKTPLRKLVIMSLDRVKRGRGPVMVKTVGGTVFVVLLSSVYSMVKIQNRTIE 60

Query: 73  AGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKTMEVAKKQIRASE 132
            G VNPTDQVLMS H+LEASLMGF+LFL+LMIDRLHHYIRELR+LRKTME AKKQ R  E
Sbjct: 61  GGAVNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRILRKTMEAAKKQSRGFE 120

Query: 133 D---ASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQSEEYLLEYD 192
           D    S ++ K+LGEE  TL++KI  LE++ E K KEA AAEAE EALRKQSE +L+EY 
Sbjct: 121 DGKNGSADEAKALGEEVKTLQNKIKYLESKFEEKAKEAKAAEAEVEALRKQSEVFLIEYG 180

Query: 193 RLLEDNQNIRNQLESIEHGSS 211
           RLLEDNQN+RNQLES++   S
Sbjct: 181 RLLEDNQNLRNQLESMDQSLS 201

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BLAST of CmaCh20G006070.1 vs. TAIR10
Match: AT5G42570.1 (AT5G42570.1 B-cell receptor-associated 31-like)

HSP 1 Score: 252.3 bits (643), Expect = 2.6e-67
Identity = 145/210 (69.05%), Postives = 173/210 (82.38%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MI LL+TVI AEMALIL LLF+TPLRKL+IL+ DR+KRG+GP+VV+TI  TVFVVL+SS+
Sbjct: 1   MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YS+V IQ R  +   +NPTDQVL S HLLEASLMGF+LFL+LMIDRLHHYIRELRLLRKT
Sbjct: 61  YSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLMGFVLFLSLMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASED---ASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME AKKQ R  ED    S E++K+LGEE   L++KI  LE+E E+K KE   A+ ETEAL
Sbjct: 121 METAKKQNRGFEDGKTTSGEEVKALGEEIAALKAKIKTLESESESKGKELKGAQGETEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEH 208
           RKQ++ +L+EYDRLLEDNQN+RNQLESI H
Sbjct: 181 RKQADGFLMEYDRLLEDNQNLRNQLESIGH 210

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BLAST of CmaCh20G006070.1 vs. TAIR10
Match: AT1G11905.1 (AT1G11905.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 196.1 bits (497), Expect = 2.2e-50
Identity = 109/209 (52.15%), Postives = 162/209 (77.51%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           M QLLF V+  E+ +I+ L F+TP+RKL+I+SLDR KRG+GP+V+QT++ TV V+L++SV
Sbjct: 1   MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           Y+M+ IQ R IE G VNPTD+V+M+ HLLE++LMG  LFL LMIDRLHHY+RELR+ RK 
Sbjct: 61  YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMGGFLFLGLMIDRLHHYMRELRIRRKN 120

Query: 121 MEVAKKQ---IRASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           MEV KK+   +   +   ++++K+L EE T+LR +  +L++E+EA++KE    +    AL
Sbjct: 121 MEVIKKEGALLEGVKARGLDEVKNLMEEITSLRKRQEQLDSELEARSKEIRTEKTSAVAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIE 207
           +KQSE +L+E++RLLE+NQ +R+QL +++
Sbjct: 181 QKQSEGFLIEFNRLLEENQVLRDQLHTVD 209

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BLAST of CmaCh20G006070.1 vs. TAIR10
Match: AT5G48660.1 (AT5G48660.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-37
Identity = 97/213 (45.54%), Postives = 144/213 (67.61%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRT-PLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISS 60
           MIQLLF V+  E A+   LL +  PLR+LVI SLD++K GKGP  V+TIAGT+ V+L S+
Sbjct: 1   MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSN 60

Query: 61  VYSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRK 120
           + S+VKIQN+  + G ++P DQVL   HLLEASL+G +LFL  +IDR+HHY+R+L  LR 
Sbjct: 61  LMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLLGVVLFLGFIIDRMHHYLRKLINLRS 120

Query: 121 TMEVAKK----------QIRASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANA 180
            +  +K+          +++  E+ + +++K L  + +++  ++ K E E + K K+   
Sbjct: 121 NVGSSKEELEQLQKERTELKEKEEKASKEIKQLQVKLSSITERLKKAETESKEKEKKLET 180

Query: 181 AEAETEALRKQSEEYLLEYDRLLEDNQNIRNQL 203
           AE    AL+KQS E LLEYDRLLEDNQ++++Q+
Sbjct: 181 AETHVTALQKQSAELLLEYDRLLEDNQHLQSQI 213

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BLAST of CmaCh20G006070.1 vs. TAIR10
Match: AT3G07190.1 (AT3G07190.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 96/213 (45.07%), Postives = 142/213 (66.67%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRT-PLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISS 60
           MIQLLF V+  E A+   LL +  PLR+LV+ SLD++K GK P  ++TIAGT+ V+L+S+
Sbjct: 1   MIQLLFLVLFVEGAIAFLLLVKIGPLRELVMKSLDQLKLGKRPATLKTIAGTMSVILLSN 60

Query: 61  VYSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRK 120
           + +++KIQN+  + G ++P DQVL   HLLEASLMG +LF   +IDR HHY+ +L  LR 
Sbjct: 61  LMNIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLMGVVLFFGFIIDRTHHYLEKLITLRS 120

Query: 121 TM--------EVAKKQI--RASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANA 180
            +        E+ K++I  +  E+ + +++K L E+ + +   + KLE E + K  +   
Sbjct: 121 NVGSSKGELEELRKERIELKEKEEKTSKEIKQLKEKLSCVSENLKKLEKESKEKETKLET 180

Query: 181 AEAETEALRKQSEEYLLEYDRLLEDNQNIRNQL 203
           AEA   AL+KQS E LLEYDRLLEDNQN+++Q+
Sbjct: 181 AEAHVTALQKQSSELLLEYDRLLEDNQNLQSQI 213

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BLAST of CmaCh20G006070.1 vs. TAIR10
Match: AT3G20450.1 (AT3G20450.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-25
Identity = 63/128 (49.22%), Postives = 94/128 (73.44%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           M QLLFT++  E  LILTL F TP R++V+  LD  K+G+ P+V +T+A T+ V+  S +
Sbjct: 5   MFQLLFTIVTIEAVLILTLGFGTPARRVVVKLLDLSKQGRAPLVAKTVAATMLVLFGSVM 64

Query: 61  YSMVKIQNRMIEAGEV-NPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRK 120
           +S ++I  R+ E+G V N TDQV+ +N LLEA LMG +LFLA++IDR+H+Y REL++ R+
Sbjct: 65  FSTIQIHTRVSESGGVANSTDQVMFANRLLEAFLMGTVLFLAMVIDRMHYYTRELQITRR 124

Query: 121 TMEVAKKQ 128
            +E+A K+
Sbjct: 125 NLEIAVKK 132

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BLAST of CmaCh20G006070.1 vs. NCBI nr
Match: gi|449468372|ref|XP_004151895.1| (PREDICTED: B-cell receptor-associated protein 31 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90
Identity = 191/210 (90.95%), Postives = 203/210 (96.67%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLLFTVIA +MALILTLLFRTPLRKLVI +LDR+KRGKGPIVVQTIAGTVFVVL+SSV
Sbjct: 1   MIQLLFTVIATQMALILTLLFRTPLRKLVIFTLDRLKRGKGPIVVQTIAGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KI NRM+EAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT
Sbjct: 61  YSMLKIHNRMVEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASEDASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEALRKQ 180
           MEVAKKQIRASEDAS EKLK+LGEEATT+R+KITKLE+EVE KTKEAN AEAET+ALRKQ
Sbjct: 121 MEVAKKQIRASEDASAEKLKALGEEATTMRNKITKLESEVEVKTKEANDAEAETDALRKQ 180

Query: 181 SEEYLLEYDRLLEDNQNIRNQLESIEHGSS 211
           SEEYLLEYDRLLEDNQN+RNQLESIEH SS
Sbjct: 181 SEEYLLEYDRLLEDNQNLRNQLESIEHASS 210

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BLAST of CmaCh20G006070.1 vs. NCBI nr
Match: gi|1000954307|ref|XP_002524828.2| (PREDICTED: B-cell receptor-associated protein 31 [Ricinus communis])

HSP 1 Score: 272.3 bits (695), Expect = 7.0e-70
Identity = 155/213 (72.77%), Postives = 181/213 (84.98%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLL+ VI AEM LI+TLLF+TPLRKLVI+SLDRVKRG+GP++V+T+ GTVFVVL+SSV
Sbjct: 1   MIQLLYAVIFAEMGLIMTLLFKTPLRKLVIMSLDRVKRGRGPVMVKTVGGTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSMVKIQNR IE G VNPTDQVLMS H+LEASLMGF+LFL+LMIDRLHHYIRELR+LRKT
Sbjct: 61  YSMVKIQNRTIEGGAVNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRILRKT 120

Query: 121 MEVAKKQIRASED---ASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME AKKQ R  ED    S ++ K+LGEE  TL++KI  LE++ E K KEA AAEAE EAL
Sbjct: 121 MEAAKKQSRGFEDGKNGSADEAKALGEEVKTLQNKIKYLESKFEEKAKEAKAAEAEVEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEHGSS 211
           RKQSE +L+EY RLLEDNQN+RNQLES++   S
Sbjct: 181 RKQSEVFLIEYGRLLEDNQNLRNQLESMDQSLS 213

[Close]

BLAST of CmaCh20G006070.1 vs. NCBI nr
Match: gi|567910541|ref|XP_006447584.1| (hypothetical protein CICLE_v10016648mg [Citrus clementina])

HSP 1 Score: 270.4 bits (690), Expect = 2.6e-69
Identity = 149/213 (69.95%), Postives = 185/213 (86.85%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLL+TVI ++MALI+TLLF+TPLRKLVI+SLDRVKRG+GP+VV+T+ GT+F+VL+SSV
Sbjct: 1   MIQLLYTVIFSQMALIMTLLFKTPLRKLVIMSLDRVKRGRGPVVVKTVGGTLFIVLMSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YS++KIQ R +E G +NPTDQ+LMS H+LEASLMGFLLFL+LM+DRLHHYIRELRLLRK 
Sbjct: 61  YSILKIQQRTLETGALNPTDQILMSKHMLEASLMGFLLFLSLMMDRLHHYIRELRLLRKA 120

Query: 121 MEVAKKQIRASEDA---SVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME AKKQ R+ ED    +V++ K LG++  TL++KI KLE+E E K KEANAA+AE EAL
Sbjct: 121 MEAAKKQTRSFEDGKNDNVDERKGLGDDIATLKTKIKKLESECEMKDKEANAAKAEAEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEHGSS 211
           +KQSE +LLEYDRLL DNQ++RNQLESI+H  S
Sbjct: 181 KKQSEGFLLEYDRLLADNQHLRNQLESIDHSDS 213

[Close]

BLAST of CmaCh20G006070.1 vs. NCBI nr
Match: gi|225447047|ref|XP_002270301.1| (PREDICTED: B-cell receptor-associated protein 31-like [Vitis vinifera])

HSP 1 Score: 269.6 bits (688), Expect = 4.5e-69
Identity = 153/211 (72.51%), Postives = 181/211 (85.78%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLLFTVI AEMALI+TLLF+TPLRKLV+++LDRVKRG+GPI+ QT+A TVFVVL+SSV
Sbjct: 1   MIQLLFTVIFAEMALIMTLLFKTPLRKLVVMALDRVKRGRGPIMAQTVATTVFVVLMSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YSM+KIQNR +E G +NPTDQVLM+ HLLEASLMGFLLFLALMIDRLHHYIRELRLLRK 
Sbjct: 61  YSMMKIQNRSVEPGLINPTDQVLMARHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKA 120

Query: 121 MEVAKKQIRASEDAS---VEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME  KKQ R  ED      E+ K++GEE ++LR++I KLE+E E K KEA AAEA T AL
Sbjct: 121 MEAEKKQNRGFEDGKNGRAEEAKAMGEEMSSLRTQIKKLESECETKAKEAEAAEANTVAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEHG 209
           +KQSE +LLEYDRLLE+NQN+++QLESI+ G
Sbjct: 181 KKQSEGFLLEYDRLLEENQNLKSQLESIDQG 211

[Close]

BLAST of CmaCh20G006070.1 vs. NCBI nr
Match: gi|729376115|ref|XP_010549208.1| (PREDICTED: B-cell receptor-associated protein 31 [Tarenaya hassleriana])

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-68
Identity = 149/211 (70.62%), Postives = 185/211 (87.68%), Query Frame = 1


Query: 1   MIQLLFTVIAAEMALILTLLFRTPLRKLVILSLDRVKRGKGPIVVQTIAGTVFVVLISSV 60
           MIQLL+TVI AE+ALI+TLLF+TPLRKLVI++LDR+KRG+GP+VV+TIA TVFVVL+SSV
Sbjct: 1   MIQLLYTVIFAEVALIMTLLFKTPLRKLVIMTLDRIKRGRGPVVVKTIATTVFVVLLSSV 60

Query: 61  YSMVKIQNRMIEAGEVNPTDQVLMSNHLLEASLMGFLLFLALMIDRLHHYIRELRLLRKT 120
           YS++KIQ   +E+G ++PTDQ+LM+ H+LEASLMGF+LFL+LMIDRLHHYIRELRLLRKT
Sbjct: 61  YSILKIQRGSVESGVLSPTDQILMAKHMLEASLMGFVLFLSLMIDRLHHYIRELRLLRKT 120

Query: 121 MEVAKKQIRASED---ASVEKLKSLGEEATTLRSKITKLEAEVEAKTKEANAAEAETEAL 180
           ME AKKQ R  ED   AS E++K+LGEE   L++KI +LE+E E K KE  +A+AETEAL
Sbjct: 121 METAKKQNRGFEDGKNASAEEVKALGEEVAALKAKIKRLESECETKGKELKSAQAETEAL 180

Query: 181 RKQSEEYLLEYDRLLEDNQNIRNQLESIEHG 209
           RKQ++ +LLEYDRLLEDNQN+RNQLESI+ G
Sbjct: 181 RKQADGFLLEYDRLLEDNQNLRNQLESIDQG 211

The following BLAST results are available for this feature:

BLAST of CmaCh20G006070.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh20G006070.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMU5_CUCSA	8.5e-91	90.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G416790 PE=4 SV=1	[more]
A0A067EUY0_CITSI	1.8e-69	69.95	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027898mg PE=4 SV=1	[more]
V4W496_9ROSI	1.8e-69	69.95	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016648mg PE=4 SV=1	[more]
F6HIC4_VITVI	3.1e-69	72.51	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g00810 PE=4 SV=...	[more]
B9SFQ9_RICCO	2.5e-66	72.64	Bcr-associated protein, bap, putative OS=Ricinus communis GN=RCOM_1224170 PE=4 S...	[more]

BLAST of CmaCh20G006070.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42570.1	2.6e-67	69.05	B-cell receptor-associated 31-like	[more]
AT1G11905.1	2.2e-50	52.15	B-cell receptor-associated protein 31-like	[more]
AT5G48660.1	1.7e-37	45.54	B-cell receptor-associated protein 31-like	[more]
AT3G07190.1	1.6e-35	45.07	B-cell receptor-associated protein 31-like	[more]
AT3G20450.1	7.3e-25	49.22	B-cell receptor-associated protein 31-like	[more]

BLAST of CmaCh20G006070.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468372\|ref\|XP_004151895.1\|	1.2e-90	90.95	PREDICTED: B-cell receptor-associated protein 31 [Cucumis sativus]	[more]
gi\|1000954307\|ref\|XP_002524828.2\|	7.0e-70	72.77	PREDICTED: B-cell receptor-associated protein 31 [Ricinus communis]	[more]
gi\|567910541\|ref\|XP_006447584.1\|	2.6e-69	69.95	hypothetical protein CICLE_v10016648mg [Citrus clementina]	[more]
gi\|225447047\|ref\|XP_002270301.1\|	4.5e-69	72.51	PREDICTED: B-cell receptor-associated protein 31-like [Vitis vinifera]	[more]
gi\|729376115\|ref\|XP_010549208.1\|	2.2e-68	70.62	PREDICTED: B-cell receptor-associated protein 31 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008417	BAP29/BAP31

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh20G006070	CmaCh20G006070	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh20G006070.1	CmaCh20G006070.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G006070.1.three_prime_UTR.1	CmaCh20G006070.1.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G006070.1.CDS.2	CmaCh20G006070.1.CDS.2	CDS
CmaCh20G006070.1.CDS.1	CmaCh20G006070.1.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G006070.1.five_prime_UTR.1	CmaCh20G006070.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh20G006070.1.exon.2	CmaCh20G006070.1.exon.2	exon
CmaCh20G006070.1.exon.1	CmaCh20G006070.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..210 score: 4.7
IPR008417	B-cell receptor-associated protein 29/31	PFAM	PF05529	Bap31	coord: 3..189 score: 2.9
None	No IPR available	unknown	Coil	Coil	coord: 139..208 score: -coord: 107..134 scor
None	No IPR available	PANTHER	PTHR12701:SF18	4D656-RELATED	coord: 1..210 score: 4.7