CmaCh18G012380.1 (mRNA) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGGCAATCTGTACTCGCGTTTGGGTCAAGCCAACGCAAAGGAGATGGCAACCTATTGGGTCTCTTCGCAGATCGCTCTATAAAAGCCATCGTAATCAACCCCAAACCCACCGGAAAACTCCATTTTTCTTCTTCCTTCTTCTTCTTCTTCGTCTTCTTCTCTGTCTTTTATTTCCCCATAAACCCTAGCCATGGCGTCGCACGTACAATTCAGCAAAACGGGGCCGTTTTGGACCGATGAAAAGCACGTGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCCATGTACGAAAATCTGCACCATCGCCGCCGTCTACGGTTGAACCGCCTCCTCCCGGACACTGCTGACTCAACCCTAGATTCGCATCAGAAATACAGGAAAAACCACCATCCTACCGCCGGTGAGTTTAGGGTTAACGTGAAACAAAAGAGGACGATGATTATTTCCGATTTTTTTTTTTTTTTTTTTTTTACTAAAAAAGGACCAATCAAACAGCGTCAAAACTATACGATAAAAGTGGGAATAGTGAATATTCCTTACGAAGATATTTATGTGATTATATATATATATATATATATATATCAATAAACACATCAATTAATATTCATTCCTTTCTGGCTGCTTGCATTTCTTTTTTTGTTATTATTGCCTTTTTTAAATTAAAAAAAAAAAAACTTTTGCCTGTGATCCAGGAGGTGGCAGATTGGACGGTAGATCTAGCAGGAGATCGAGGAGGATATCATCTCTACCGCCCATTTCAATTCAAGATCAGGTTAGTCAGAACTCCATATCAAACATTGCATTTCTTTTTTCTTTCTTTTTTCTCTTCCAATATTAGAAATTGTATATTAAATATATCAACACCAACTTTTGTTTTTTTTATAAACTTTTGTTTTTATCTCCAAACAGTTTAGTTGAGTTGGATTAATGGCTCGAACAATGATTTTTAAGTCACAACACATCTTTAACCGTTGTTATTAACGTCAACAGGGTGAGTTGTGTACCCTATTATAGAGTTGGTGGGTTAGATAGATTGAGTTATAAACCTTGTCTTGGAGTTAGTTGGGTTAATCTAACTAGCTTGAAGTAAGTCAGGTTGTAAGCGGGTTACCCTTATTAAGCAAACAAATGGATTTTTTTGTTTTCTAAAATTTTAAGCTAACACAAATCGAAAAATATCTAACTCTACCCAACTCGTGGTTAATTTGAGTATTTTTTTTTTTTTTTTGAAGGTCTTAATTAAGAAGGGATTTAAAGTGATTAAATTATAATTAAGTAGAGTATTATGGGCATAATGTGATGGAAAAGTGGTGGAAGTCTAAATTTTATTAATATAAATAAATTAATAATAAAGCAGAAGAAAAAATATCTGCTTCAATAAATGAATAATCCATGATCCATATCTCATAAATTATGCATGAATTAGTTAGAAAATAATATGTAATTTTTGGTAAGTAATTAATAATTAAAATAAAGGGCATGCTTGTGTGATCGGACAGGTGGTCCCACAAATGGAAAATAGAGCAGCTGAGGAAGAAGATGAGGAAGACCATCTGACGTCACCTATCAATTGCTAAATATAATAATATTATTTCTTCTGCATTTTTCCACTATTTTTTTTCTTTTTTCATTTTTTTCTATGTCTTTTCACTTTATTGGATTAAATCTAAATTAATGATGGTGTGAGACGAAGGGTTTAATTGGAAATCATTGAATGTGATTGGGTGGAAAGAATCCATATATAATATAACTTATGTTAAAAAAGTCTTAAAATATATTAATAAAATATCATAATCTAAATTATAATTAAATTAATCAAAAGTTGATATGTACTACCAAATTAATAGAAAGGAAAGTAAAGTATTCAAATTAAATCTAATAATATTAAACTGATTTTATTTTGTAGTTTAAATAATCTTTTTGACCCATTAATTTTATGAAAAAATAATTTGATTACGACATTTGACAAGGAAAAGACGTGTACGAAGAGTTTTTTGTTTGTGTGTAAATTCAACAATATGCAGGTAAGAAAGATTTGATACTTCACACGATAACTCATGCACACAGAAATTAGGTTAGAAACAACCTACGATAAAAAAAAAAATATATATATATATATATATATAAAATACTAATTTTACGAAGTTAGTGAACTATATTTTCATAAACTATTGTGCTGATAATCACCGAAAAGGTCAAATAAAACATGTTGTTATTTTTTTTATTCCTTCTCATAATTATTTGAAATTACAAAAAGAAAAATAACTCTCGGTGTGTTCTGTATCGAATTGCATTGATAAAAATTGATACAAAATAAGTTTAGGGGTAAAAAAAAAGGGGTAAAAAAAAAATAATATTTTTATTCGAGGGGCATGAGAGATAATCCTTATATTTTGAGGGGGTACTTGTGAAAAGATAAAAAAAAAAAAATATAATATACTAAAAAAACTGGACCTTGGGTCGAGCCGATCCCGCTCATTACCGCCGCACTTGATTGGAGCCCTGTCGTTTTTACACCGCGGAGACCCGTCAGAGATCTGAAGCTCGAAGAACCGTTGAAATCACCTTGAACAACCCAAGCTCTTGCACTTGATTCGAAGGAAACCACTTCTTCCCGCTATGTTGCTGCAAAAATTTTCAGTAAACAGGAATTTGCTTCTTCATGTCGGACTGTCTCTATCGCTTTCCTTTTTCATCATCTTCTTCAAGATCCCAACCCTCTTCCTTCATGGCATATTCACCTACATCCACCCTGATAACGCCAGCAGTGGCGTCCGAGCTGCGATTAGAAGACCTGACGGCTCTAACTCCGGTTCTGGTCTAGAGGGCTACCGAAACTTGTCGTCAACGGGTGCCGCTGAGATCAGGAAAAGAACAAAGTCGAAGGATAAGGAGAAGGTTGAGTTTGACGAAAGCAAGGCGCAGATCTTCAGGTTAAAGCTGGATGAGAATCATCTCCAAACGCGGATCTATTTCAAAGAATACAGAGATGGATTCACTTTTTCATTTGTCGGTATTTCTTGTTTACTGCTGCAATTTTTCTTGGGTGCATCTGAAGATTCTGGAGTTTGGGGAAATGGGATGTTTGTTCCTCTTCTTTTCGCCATCTTCGCTGGATGTAAGTTGTTTGTATCACTCGGTAAGGTTGCTTTGGAGAAATCTGCGTCTAGGTCGTTGGATAGGCAATTGAGCTTACTTTTTGGAGTTTGTGGGTTTCTTTTTGGACTTCTAACCTGTTCTTCGTTTAGCCCTTTTATATTGGATTTTGATCTTGATCAAATTAGTGGTTTGGGGACCTTTTTCGTTGCCATGTTAATGGGTTGCTTTTCGGGGTTTTTGTTTATACCTGCAACAAAAATCGCTCGCTGTTTTTGGCTTGGAACTGATCAAATTAGATGCAACTTGGAAATGGTTTATTGTGGGTGGTTTTCTCGGATGATTTTGTATGCCAGTCAGGTGACCTTGTTTTTCACCACTCTGCTTTGGATCAAACCATTAGCTGAAATTTTCATTAACAAGAACATTGGCGGAAGTGCAATTGAACATATGTTAAATGAAATCGAAAATGATGACAGATTGGCCGGAAATATAGGATTCTCAAAGGCTGATTTTGCCAAGCTTAGGCTCTGGTGTTTGGCACTGTGTGGTTTCTTGCAAATCATTGCTGTGAGGCAAAACTTACAAATGTATCTGAACGAAGCTCTGTTATCTTGGTATCAAAGACTGCATGCTGGGAAAGTTCCTGAATTGGATTTCAGTAGAGCAAAGGTTTTTCTGCACAATCACTACTTATGTGTGGCTTCTTTGCAGTTTTTTGCTCCACCAGCCTTAGTTTTGCTTTTCTTTGGGTTATCTCAAATTAGTATCAGCTCTTTGGAAGGCACCAGCTTGGCTAGTTTTATTCTTTCCTGCTCTCCCTTAATAAAAAAAGTGCCTCTGTTAATGGCTTGGTGGATTGTCTCTGTTATGTCTATTTATACATCAGTCACCATCGTGCTATATCGTCGTGGTGTGCTGTATGTTTCTTGA GAGGCAATCTGTACTCGCGTTTGGGTCAAGCCAACGCAAAGGAGATGGCAACCTATTGGGTCTCTTCGCAGATCGCTCTATAAAAGCCATCGTAATCAACCCCAAACCCACCGGAAAACTCCATTTTTCTTCTTCCTTCTTCTTCTTCTTCGTCTTCTTCTCTGTCTTTTATTTCCCCATAAACCCTAGCCATGGCGTCGCACGTACAATTCAGCAAAACGGGGCCGTTTTGGACCGATGAAAAGCACGTGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCCATGTACGAAAATCTGCACCATCGCCGCCGTCTACGGTTGAACCGCCTCCTCCCGGACACTGCTGACTCAACCCTAGATTCGCATCAGAAATACAGGAAAAACCACCATCCTACCGCCGTAAACAGGAATTTGCTTCTTCATGTCGGACTGTCTCTATCGCTTTCCTTTTTCATCATCTTCTTCAAGATCCCAACCCTCTTCCTTCATGGCATATTCACCTACATCCACCCTGATAACGCCAGCAGTGGCGTCCGAGCTGCGATTAGAAGACCTGACGGCTCTAACTCCGGTTCTGGTCTAGAGGGCTACCGAAACTTGTCGTCAACGGGTGCCGCTGAGATCAGGAAAAGAACAAAGTCGAAGGATAAGGAGAAGGTTGAGTTTGACGAAAGCAAGGCGCAGATCTTCAGGTTAAAGCTGGATGAGAATCATCTCCAAACGCGGATCTATTTCAAAGAATACAGAGATGGATTCACTTTTTCATTTGTCGGTATTTCTTGTTTACTGCTGCAATTTTTCTTGGGTGCATCTGAAGATTCTGGAGTTTGGGGAAATGGGATGTTTGTTCCTCTTCTTTTCGCCATCTTCGCTGGATGTAAGTTGTTTGTATCACTCGGTAAGGTTGCTTTGGAGAAATCTGCGTCTAGGTCGTTGGATAGGCAATTGAGCTTACTTTTTGGAGTTTGTGGGTTTCTTTTTGGACTTCTAACCTGTTCTTCGTTTAGCCCTTTTATATTGGATTTTGATCTTGATCAAATTAGTGGTTTGGGGACCTTTTTCGTTGCCATGTTAATGGGTTGCTTTTCGGGGTTTTTGTTTATACCTGCAACAAAAATCGCTCGCTGTTTTTGGCTTGGAACTGATCAAATTAGATGCAACTTGGAAATGGTTTATTGTGGGTGGTTTTCTCGGATGATTTTGTATGCCAGTCAGGTGACCTTGTTTTTCACCACTCTGCTTTGGATCAAACCATTAGCTGAAATTTTCATTAACAAGAACATTGGCGGAAGTGCAATTGAACATATGTTAAATGAAATCGAAAATGATGACAGATTGGCCGGAAATATAGGATTCTCAAAGGCTGATTTTGCCAAGCTTAGGCTCTGGTGTTTGGCACTGTGTGGTTTCTTGCAAATCATTGCTGTGAGGCAAAACTTACAAATGTATCTGAACGAAGCTCTGTTATCTTGGTATCAAAGACTGCATGCTGGGAAAGTTCCTGAATTGGATTTCAGTAGAGCAAAGGTTTTTCTGCACAATCACTACTTATGTGTGGCTTCTTTGCAGTTTTTTGCTCCACCAGCCTTAGTTTTGCTTTTCTTTGGGTTATCTCAAATTAGTATCAGCTCTTTGGAAGGCACCAGCTTGGCTAGTTTTATTCTTTCCTGCTCTCCCTTAATAAAAAAAGTGCCTCTGTTAATGGCTTGGTGGATTGTCTCTGTTATGTCTATTTATACATCAGTCACCATCGTGCTATATCGTCGTGGTGTGCTGTATGTTTCTTGA ATGGCGTCGCACGTACAATTCAGCAAAACGGGGCCGTTTTGGACCGATGAAAAGCACGTGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCCATGTACGAAAATCTGCACCATCGCCGCCGTCTACGGTTGAACCGCCTCCTCCCGGACACTGCTGACTCAACCCTAGATTCGCATCAGAAATACAGGAAAAACCACCATCCTACCGCCGTAAACAGGAATTTGCTTCTTCATGTCGGACTGTCTCTATCGCTTTCCTTTTTCATCATCTTCTTCAAGATCCCAACCCTCTTCCTTCATGGCATATTCACCTACATCCACCCTGATAACGCCAGCAGTGGCGTCCGAGCTGCGATTAGAAGACCTGACGGCTCTAACTCCGGTTCTGGTCTAGAGGGCTACCGAAACTTGTCGTCAACGGGTGCCGCTGAGATCAGGAAAAGAACAAAGTCGAAGGATAAGGAGAAGGTTGAGTTTGACGAAAGCAAGGCGCAGATCTTCAGGTTAAAGCTGGATGAGAATCATCTCCAAACGCGGATCTATTTCAAAGAATACAGAGATGGATTCACTTTTTCATTTGTCGGTATTTCTTGTTTACTGCTGCAATTTTTCTTGGGTGCATCTGAAGATTCTGGAGTTTGGGGAAATGGGATGTTTGTTCCTCTTCTTTTCGCCATCTTCGCTGGATGTAAGTTGTTTGTATCACTCGGTAAGGTTGCTTTGGAGAAATCTGCGTCTAGGTCGTTGGATAGGCAATTGAGCTTACTTTTTGGAGTTTGTGGGTTTCTTTTTGGACTTCTAACCTGTTCTTCGTTTAGCCCTTTTATATTGGATTTTGATCTTGATCAAATTAGTGGTTTGGGGACCTTTTTCGTTGCCATGTTAATGGGTTGCTTTTCGGGGTTTTTGTTTATACCTGCAACAAAAATCGCTCGCTGTTTTTGGCTTGGAACTGATCAAATTAGATGCAACTTGGAAATGGTTTATTGTGGGTGGTTTTCTCGGATGATTTTGTATGCCAGTCAGGTGACCTTGTTTTTCACCACTCTGCTTTGGATCAAACCATTAGCTGAAATTTTCATTAACAAGAACATTGGCGGAAGTGCAATTGAACATATGTTAAATGAAATCGAAAATGATGACAGATTGGCCGGAAATATAGGATTCTCAAAGGCTGATTTTGCCAAGCTTAGGCTCTGGTGTTTGGCACTGTGTGGTTTCTTGCAAATCATTGCTGTGAGGCAAAACTTACAAATGTATCTGAACGAAGCTCTGTTATCTTGGTATCAAAGACTGCATGCTGGGAAAGTTCCTGAATTGGATTTCAGTAGAGCAAAGGTTTTTCTGCACAATCACTACTTATGTGTGGCTTCTTTGCAGTTTTTTGCTCCACCAGCCTTAGTTTTGCTTTTCTTTGGGTTATCTCAAATTAGTATCAGCTCTTTGGAAGGCACCAGCTTGGCTAGTTTTATTCTTTCCTGCTCTCCCTTAATAAAAAAAGTGCCTCTGTTAATGGCTTGGTGGATTGTCTCTGTTATGTCTATTTATACATCAGTCACCATCGTGCTATATCGTCGTGGTGTGCTGTATGTTTCTTGA MASHVQFSKTGPFWTDEKHVHFLNSMEASFVRSMYENLHHRRRLRLNRLLPDTADSTLDSHQKYRKNHHPTAVNRNLLLHVGLSLSLSFFIIFFKIPTLFLHGIFTYIHPDNASSGVRAAIRRPDGSNSGSGLEGYRNLSSTGAAEIRKRTKSKDKEKVEFDESKAQIFRLKLDENHLQTRIYFKEYRDGFTFSFVGISCLLLQFFLGASEDSGVWGNGMFVPLLFAIFAGCKLFVSLGKVALEKSASRSLDRQLSLLFGVCGFLFGLLTCSSFSPFILDFDLDQISGLGTFFVAMLMGCFSGFLFIPATKIARCFWLGTDQIRCNLEMVYCGWFSRMILYASQVTLFFTTLLWIKPLAEIFINKNIGGSAIEHMLNEIENDDRLAGNIGFSKADFAKLRLWCLALCGFLQIIAVRQNLQMYLNEALLSWYQRLHAGKVPELDFSRAKVFLHNHYLCVASLQFFAPPALVLLFFGLSQISISSLEGTSLASFILSCSPLIKKVPLLMAWWIVSVMSIYTSVTIVLYRRGVLYVS
BLAST of CmaCh18G012380.1 vs. TrEMBL
Match: A0A0A0L8M8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G181950 PE=4 SV=1) HSP 1 Score: 734.2 bits (1894), Expect = 1.1e-208 Identity = 371/463 (80.13%), Postives = 411/463 (88.77%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. TrEMBL
Match: A0A067JQN5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26136 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 1.0e-140 Identity = 257/464 (55.39%), Postives = 338/464 (72.84%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. TrEMBL
Match: M5X6H5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005565mg PE=4 SV=1) HSP 1 Score: 507.7 bits (1306), Expect = 1.7e-140 Identity = 270/462 (58.44%), Postives = 331/462 (71.65%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. TrEMBL
Match: W9RWX8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015762 PE=4 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 3.9e-140 Identity = 265/462 (57.36%), Postives = 334/462 (72.29%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. TrEMBL
Match: B9ID55_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s13400g PE=4 SV=2) HSP 1 Score: 497.7 bits (1280), Expect = 1.8e-137 Identity = 258/463 (55.72%), Postives = 326/463 (70.41%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. TAIR10
Match: AT5G52180.1 (AT5G52180.1 LOCATED IN: endomembrane system) HSP 1 Score: 428.7 bits (1101), Expect = 5.2e-120 Identity = 229/467 (49.04%), Postives = 306/467 (65.52%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. NCBI nr
Match: gi|449446045|ref|XP_004140782.1| (PREDICTED: transmembrane protein 161B [Cucumis sativus]) HSP 1 Score: 734.2 bits (1894), Expect = 1.6e-208 Identity = 371/463 (80.13%), Postives = 411/463 (88.77%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. NCBI nr
Match: gi|659077413|ref|XP_008439191.1| (PREDICTED: transmembrane protein 161B [Cucumis melo]) HSP 1 Score: 733.8 bits (1893), Expect = 2.2e-208 Identity = 373/463 (80.56%), Postives = 412/463 (88.98%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. NCBI nr
Match: gi|802769182|ref|XP_012090285.1| (PREDICTED: transmembrane protein 161B [Jatropha curcas]) HSP 1 Score: 508.4 bits (1308), Expect = 1.5e-140 Identity = 257/464 (55.39%), Postives = 338/464 (72.84%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. NCBI nr
Match: gi|596049154|ref|XP_007220463.1| (hypothetical protein PRUPE_ppa005565mg [Prunus persica]) HSP 1 Score: 507.7 bits (1306), Expect = 2.5e-140 Identity = 270/462 (58.44%), Postives = 331/462 (71.65%), Query Frame = 1
BLAST of CmaCh18G012380.1 vs. NCBI nr
Match: gi|703141087|ref|XP_010107421.1| (hypothetical protein L484_015762 [Morus notabilis]) HSP 1 Score: 506.5 bits (1303), Expect = 5.6e-140 Identity = 265/462 (57.36%), Postives = 334/462 (72.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
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